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Conserved domains on  [gi|221329751|ref|NP_001138172|]
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uncharacterized protein Dmel_CG42308, isoform B [Drosophila melanogaster]

Protein Classification

DUF4516 domain-containing protein( domain architecture ID 10633188)

DUF4516 domain-containing protein similar to Homo sapiens protein C12orf73

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 2.17e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


:

Pssm-ID: 464425  Cd Length: 46  Bit Score: 75.12  E-value: 2.17e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 221329751   1 MPAGVSWGQYLKFLGCALASMMAGSQAVHLYYKPLEDLRVYIEQEQ 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 2.17e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


Pssm-ID: 464425  Cd Length: 46  Bit Score: 75.12  E-value: 2.17e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 221329751   1 MPAGVSWGQYLKFLGCALASMMAGSQAVHLYYKPLEDLRVYIEQEQ 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 2.17e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


Pssm-ID: 464425  Cd Length: 46  Bit Score: 75.12  E-value: 2.17e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 221329751   1 MPAGVSWGQYLKFLGCALASMMAGSQAVHLYYKPLEDLRVYIEQEQ 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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