|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1329-1652 |
1.40e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.02 E-value: 1.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1329 KAPGSEDRATE-QKEKELERKSETLQQKDQILSEKAALVQR-DSVMHQKDEALDEENKPGGQQDKTSEQKGRDLDKKdtA 1406
Cdd:PTZ00121 1303 KADEAKKKAEEaKKADEAKKKAEEAKKKADAAKKKAEEAKKaAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK--A 1380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1407 VELGKGPEPKGKDLYLEDQGLAEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQKDEHLELRDKTPEEKDKvlVLEDRA 1486
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKK--AEEAKK 1458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1487 PEHIIPQPTQTDRAPEHRSKVDKEQK-DEASEEKEQVLEQKDWAREKEGAALDQDN-RAAGQK----DGTLKEDKTQGQK 1560
Cdd:PTZ00121 1459 AEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADEaKKAEEAkkadEAKKAEEAKKADE 1538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1561 SSFLEDKSTTPKEMTLDQ-KSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEKYWKEQDVVQGWRETSPTRGE 1639
Cdd:PTZ00121 1539 AKKAEEKKKADELKKAEElKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA 1618
|
330
....*....|...
gi 291045426 1640 PVPAWEGKSPEQE 1652
Cdd:PTZ00121 1619 KIKAEELKKAEEE 1631
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
301-650 |
6.88e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.61 E-value: 6.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 301 AGAVPANLKPSKIKHRADSKESLKAAPKTAMSKLAKREEVLEEGAKEARSELAKELAKSEKKAKEPSEKPPEKPSKPERV 380
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL 1410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 381 RTESSEALKAEKRKLIKDKVGK-KHLKEKISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKF 459
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK 1490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 460 SKPDLKPFTPEVRKTL-YKAKAPGRLKVDKGRAARGEKELSSEPRTPPAQKGAAPPPAASGHRELALSSPEDLTQDFEEL 538
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAeAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAK 1570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 539 KREERGLLA-----EPRDTELGEKPLPADASEQGRPSTAIQVTQPPASVLEQEQVEREKEVVPDFPEDKGSKNRAPDSGA 613
Cdd:PTZ00121 1571 KAEEDKNMAlrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
330 340 350
....*....|....*....|....*....|....*..
gi 291045426 614 EVEREKETWEERKPREAELTPENIAAAREESEPEVKE 650
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1748-2117 |
3.11e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1748 PVGLPPEEEDKLTRSPFEIISPPASPPEMTGQRVPSAPGQESPVPDTKSTPPTRNEPTTPSWLAEIPPWVPKDRPLPPAP 1827
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1828 LSPAPAPPTPAPDPHAPapfSWGIAEY----DSVVAAVQEGAAELEGGPYSPLGKDY---RKAEGEREGEGGAGAPDSSS 1900
Cdd:PHA03307 152 PPAAGASPAAVASDAAS---SRQAALPlsspEETARAPSSPPAEPPPSTPPAAASPRpprRSSPISASASSPAPAPGRSA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1901 FSSKVPEVTESHTTRDAEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGR 1980
Cdd:PHA03307 229 ADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1981 NKSAEKeLSSAVSPPNLHSDTPTFSYASLAGPTIPPRQEPEPGPNvePSFTPPAVPPRAPISLSQDPSPPLNGSTTSCGP 2060
Cdd:PHA03307 309 PSSPRA-SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS--PSRPPPPADPSSPRKRPRPSRAPSSPAASAGRP 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 291045426 2061 DRRTPSPKEAGRSHWDDGTNDSDLEKGAREQPEKETQSPSPHHPMPVGHPS--LWPETE 2117
Cdd:PHA03307 386 TRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSP 444
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1341-1616 |
2.22e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.35 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1341 KEKELERKS--ETLQQKDQILSEKAALVQRDSVMHQKDEALDEENKpgGQQDKTSEQKGRDLDKKDTAVELGKGPEPKGK 1418
Cdd:TIGR00618 159 KAKSKEKKEllMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQ--LLTLCTPCMPDTYHERKQVLEKELKHLREALQ 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1419 DLYLEDQGLAEKDKALEQRGA---ALQQTQAPEPRARAQEHRdLEQKDEHLELRDK----TPEEKDKVLVLEDRAPEHII 1491
Cdd:TIGR00618 237 QTQQSHAYLTQKREAQEEQLKkqqLLKQLRARIEELRAQEAV-LEETQERINRARKaaplAAHIKAVTQIEQQAQRIHTE 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1492 PQPTQTDRAPEhRSKVDKEQKDEASEEKEQVLEQKDWAREKEGAalDQDNRAAGQKDGTLKED------KTQGQKSSFLE 1565
Cdd:TIGR00618 316 LQSKMRSRAKL-LMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIR--DAHEVATSIREISCQQHtltqhiHTLQQQKTTLT 392
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 291045426 1566 DKSTTPKEMtLDQKSPEKAK--------GVEQQDGAVPEKTRALGLEESPEEEGKAREQ 1616
Cdd:TIGR00618 393 QKLQSLCKE-LDILQREQATidtrtsafRDLQGQLAHAKKQQELQQRYAELCAAAITCT 450
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1334-1619 |
2.51e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.97 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1334 EDRATEQKEKELERKSETLQQKDQIL------------SEKAAL----VQRDSVMHQKDEALDEENKPGGQQDKTSEQKG 1397
Cdd:pfam02463 167 LKRKKKEALKKLIEETENLAELIIDLeelklqelklkeQAKKALeyyqLKEKLELEEEYLLYLDYLKLNEERIDLLQELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1398 RDLDKKDtavELGKGPEPKGKDLY---LEDQGLAEKDKALEQRGAALQQTQAPEPR-----ARAQEHRDLEQKDEHLElr 1469
Cdd:pfam02463 247 RDEQEEI---ESSKQEIEKEEEKLaqvLKENKEEEKEKKLQEEELKLLAKEEEELKsellkLERRKVDDEEKLKESEK-- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1470 DKTPEEKDKVLVLEDRAPEHIIPQPTQTDRAPEHRSKVDKEQKDEASEEKEQVLE---QKDWAREKEGAALDQDNRAagQ 1546
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLakkKLESERLSSAAKLKEEELE--L 399
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 291045426 1547 KDGTLKEDKTQGQKSSFLED-----KSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEK 1619
Cdd:pfam02463 400 KSEEEKEAQLLLELARQLEDllkeeKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKET 477
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2208-2625 |
3.48e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.47 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2208 PSPSSPGAPLLSNLPRPASPA---LSEGSSSEATTPVISSvaerFPPGLE-VAEQSSGELGPGNEPAAHSL---WDLTPL 2280
Cdd:PHA03247 2496 PDPGGGGPPDPDAPPAPSRLApaiLPDEPVGEPVHPRMLT----WIRGLEeLASDDAGDPPPPLPPAAPPAapdRSVPPP 2571
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2281 SPAPLASRDLAPAPAPAPAPSLPGNLGDGTLSCRPECSGELTKKPSPFLSHSGDHEANGPGETSLNPPGFATATAEKEEA 2360
Cdd:PHA03247 2572 RPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2361 EALH-AWERGSWPEGAERSSRPDTLLSSEQRPGKSSGGPPC-SLSSEVEAGPQGCATDPRPHcgELSPSFLNPPLPPSTD 2438
Cdd:PHA03247 2652 PRDDpAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPH--ALVSATPLPPGPAAAR 2729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2439 DSDLSTEEARLAGKGGRRRAGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDGDFLPV 2518
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2519 ---DKAGGVSGTHHPRPGHDPPPAPLPDPRPPPPRPDVCMADPEGLSSESGRVErlrekvqgrpgRKAPGRAKPASPARR 2595
Cdd:PHA03247 2810 avlAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVR-----------RRPPSRSPAAKPAAP 2878
|
410 420 430
....*....|....*....|....*....|
gi 291045426 2596 LDIRGKRSPTPgkgPVDRTSRALPRPRSTP 2625
Cdd:PHA03247 2879 ARPPVRRLARP---AVSRSTESFALPPDQP 2905
|
|
| ComEC |
COG2333 |
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily ... |
46-149 |
4.96e-04 |
|
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 441904 [Multi-domain] Cd Length: 253 Bit Score: 44.46 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 46 GRGDSALF-AVNGFNILVDGGSDRKSCFWKLV-------RHLDRIDSVLLTHIGADNLPGINGLLQR-KVAELEE-EQSQ 115
Cdd:COG2333 9 GQGDAILIrTPDGKTILIDTGPRPSFDAGERVvlpylraLGIRRLDLLVLTHPDADHIGGLAAVLEAfPVGRVLVsGPPD 88
|
90 100 110
....*....|....*....|....*....|....
gi 291045426 116 GSSSYSDWVKNLISPELGVVFFNVPDKLRLPDAS 149
Cdd:COG2333 89 TSETYERLLEALKEKGIPVRPCRAGDTWQLGGVR 122
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1336-1631 |
2.58e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.39 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1336 RATEQKEKELERKSETLQQKDQILSEKAALVQRDsVMHQKDEALDEENkpggQQDKTSEQKGRDLDKKDTAVElgkgpep 1415
Cdd:COG1196 270 EELRLELEELELELEEAQAEEYELLAELARLEQD-IARLEERRRELEE----RLEELEEELAELEEELEELEE------- 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1416 kgkDLYLEDQGLAEKDKALEQRGAALQQTQApepRARAQEHRDLEQKDEHLELRDKTPEEKDKVLVLEDRapehiIPQPT 1495
Cdd:COG1196 338 ---ELEELEEELEEAEEELEEAEAELAEAEE---ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ-----LEELE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1496 QTDRAPEHRSKVDKEQKDEASEEKEQVLEQKDWAREKEGAALDQDNRAAGQKDGTLKEDKTQGQKSSFLEdksttpkemt 1575
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE---------- 476
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 291045426 1576 ldqkspekakgvEQQDGAVPEKTRALGLEESPEEEGKAREQEEKYWKEQDVVQGWR 1631
Cdd:COG1196 477 ------------AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1911-2242 |
2.93e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1911 SHTTRDAEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGdwPPHLSTKEEAAGRNKSAEKELSS 1990
Cdd:pfam03154 131 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPS--PPPPGTTQAATAGPTPSAPSVPP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1991 AVSPPNLHSDTPTFSYAS-----LAGPTIPPRQEPEPGPNVEPsFTPPAVPPRAPI-----------------------S 2042
Cdd:pfam03154 209 QGSPATSQPPNQTQSTAAphtliQQTPTLHPQRLPSPHPPLQP-MTQPPPPSQVSPqplpqpslhgqmppmphslqtgpS 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2043 LSQDPSPPLNGSTTSCGPDRRTPSPKEAGRSHWDDGTNDSDLEKGAREQPEKETQSPSPHHPMPVGHPSLWPETEAHSSL 2122
Cdd:pfam03154 288 HMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLP 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2123 SSDSHLGPVRPSLDFPasaFGFSSLQPAPP------QLPSPAEPRSAPCGSLAFSGDRALALVPGTPTRTRHDEYLEVTK 2196
Cdd:pfam03154 368 NPQSHKHPPHLSGPSP---FQMNSNLPPPPalkplsSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPA 444
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 291045426 2197 A--PSLDSSLPQLPSPSSPGAPLLSNLPRPASPALSEGSSSEATTPVI 2242
Cdd:pfam03154 445 AshPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGI 492
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1329-1652 |
1.40e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.02 E-value: 1.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1329 KAPGSEDRATE-QKEKELERKSETLQQKDQILSEKAALVQR-DSVMHQKDEALDEENKPGGQQDKTSEQKGRDLDKKdtA 1406
Cdd:PTZ00121 1303 KADEAKKKAEEaKKADEAKKKAEEAKKKADAAKKKAEEAKKaAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK--A 1380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1407 VELGKGPEPKGKDLYLEDQGLAEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQKDEHLELRDKTPEEKDKvlVLEDRA 1486
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKK--AEEAKK 1458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1487 PEHIIPQPTQTDRAPEHRSKVDKEQK-DEASEEKEQVLEQKDWAREKEGAALDQDN-RAAGQK----DGTLKEDKTQGQK 1560
Cdd:PTZ00121 1459 AEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADEaKKAEEAkkadEAKKAEEAKKADE 1538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1561 SSFLEDKSTTPKEMTLDQ-KSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEKYWKEQDVVQGWRETSPTRGE 1639
Cdd:PTZ00121 1539 AKKAEEKKKADELKKAEElKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA 1618
|
330
....*....|...
gi 291045426 1640 PVPAWEGKSPEQE 1652
Cdd:PTZ00121 1619 KIKAEELKKAEEE 1631
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1304-1654 |
1.37e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.47 E-value: 1.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1304 DSSLTKSPESLSSPAMEDLAMEWGGKAPGSEDRATEQKEKELERKSETLQQKDQI-LSEKAALVQRDSVMHQKDEAlDEE 1382
Cdd:PTZ00121 1305 DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAeAAEEKAEAAEKKKEEAKKKA-DAA 1383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1383 NKPGGQQDKTSEQKGRDLDKKDTAVELGKGPEPKGKDLYLEDQGlAEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQK 1462
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA-EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEA 1462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1463 DehlelrdKTPEEKDKVLVLEDRAPEHIIPQPTQTdRAPEHRSKVDKEQKDEASEEKEQVLEQKDWAREKEGAALDQDNR 1542
Cdd:PTZ00121 1463 K-------KKAEEAKKADEAKKKAEEAKKADEAKK-KAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK 1534
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1543 AAGQ--------KDGTLK--EDKTQGQKSSFLEDKSTTPKEMTLDQKSPEKAKGVEQqdgAVPEKTRALGLEESPEEEGK 1612
Cdd:PTZ00121 1535 KADEakkaeekkKADELKkaEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE---ARIEEVMKLYEEEKKMKAEE 1611
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 291045426 1613 AREQEEKYWKEQDVVQGWRETSPTRGEPVPAWEGKSPEQEVR 1654
Cdd:PTZ00121 1612 AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELK 1653
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1309-1661 |
1.84e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.01 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1309 KSPESLSSPAMEDLAMEWGGKAPGSEDRATEQKEK-ELERKSETLQQKDQILSEKAALVQRDSVMHQK-DEALDEENKPG 1386
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKaDEAKKAEEAKK 1523
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1387 GQQDKTSEQK-----GRDLDKKDTAVELGKGPEPKGKDlylEDQGLAEKDKALEQRGAALQQT----QAPEPRARAQEHR 1457
Cdd:PTZ00121 1524 ADEAKKAEEAkkadeAKKAEEKKKADELKKAEELKKAE---EKKKAEEAKKAEEDKNMALRKAeeakKAEEARIEEVMKL 1600
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1458 DLEQKDEHLELRDKTPEEKDKVLVL-----EDRAPEHIIPQPTQTDRAPEHRSKVDKEQKDEASEEKEQVLEQKDWAREK 1532
Cdd:PTZ00121 1601 YEEEKKMKAEEAKKAEEAKIKAEELkkaeeEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1533 EGAalDQDNRAAGQKDGTLKEDKTQGQKSSFLEDKSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRAlglEESPEEEGK 1612
Cdd:PTZ00121 1681 KKA--EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA---EEAKKDEEE 1755
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 291045426 1613 AREQEEKYWKEQDVVQGWRETSptrgEPVPAWEGKSPEQEVRYWRDRDI 1661
Cdd:PTZ00121 1756 KKKIAHLKKEEEKKAEEIRKEK----EAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1303-1635 |
1.21e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1303 SDSSLTKSPESLSSPAMEDLAMEWGGKAPGSEDRATEQKEKELERKSETLQQKDQIL----SEKAALVQRDSVMHQKDEA 1378
Cdd:PTZ00121 1472 ADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKkaeeAKKADEAKKAEEKKKADEL 1551
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1379 LDEENKPGGQQDKTSEQKGRDLDKKDTAV---ELGKGPEPKGKDLYLEDQGLAEKDKALEQRGAALQQTQAPEPRARAQE 1455
Cdd:PTZ00121 1552 KKAEELKKAEEKKKAEEAKKAEEDKNMALrkaEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE 1631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1456 HRDLEQkdehleLRDKTPEEKDKVLVLEDRAPEHIIPQPTQTDRAPEHRSKVDKEQKDEASEEK--EQVLEQKDWAREKE 1533
Cdd:PTZ00121 1632 KKKVEQ------LKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKaaEALKKEAEEAKKAE 1705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1534 --GAALDQDNRAAGQ--KDGTLKEDKTQGQKSSFLEDKSTTpKEMTLDQKSPEKAKGVEQQDGAVPEKTR----ALGLEE 1605
Cdd:PTZ00121 1706 elKKKEAEEKKKAEElkKAEEENKIKAEEAKKEAEEDKKKA-EEAKKDEEEKKKIAHLKKEEEKKAEEIRkekeAVIEEE 1784
|
330 340 350
....*....|....*....|....*....|....*
gi 291045426 1606 SPEEEGKAREQEEKYWKE-----QDVVQGWRETSP 1635
Cdd:PTZ00121 1785 LDEEDEKRRMEVDKKIKDifdnfANIIEGGKEGNL 1819
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1336-1619 |
3.89e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.38 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1336 RATEQKEKELERKSETLQQKDQilSEKAALVQRDSVMHQKDEALD--EENKPGGQQDKTSEQKGRDLDKKDTAVelgKGP 1413
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAED--AKKAEAVKKAEEAKKDAEEAKkaEEERNNEEIRKFEEARMAHFARRQAAI---KAE 1275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1414 EPKGKDlylEDQGLAEKDKALEQRGAAlQQTQAPEPRARAQEHRDLEqkdehlELRDKTPEEKDKVLVLEDRAPEHIIPQ 1493
Cdd:PTZ00121 1276 EARKAD---ELKKAEEKKKADEAKKAE-EKKKADEAKKKAEEAKKAD------EAKKKAEEAKKKADAAKKKAEEAKKAA 1345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1494 PTQTDRAPEHRSKVDK-EQKDEA-----SEEKEQVLEQKDWAREKEGA-ALDQDNRAAGQKDGTLKEDKTQGQKSSFLED 1566
Cdd:PTZ00121 1346 EAAKAEAEAAADEAEAaEEKAEAaekkkEEAKKKADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAAAKKKADEAKK 1425
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 291045426 1567 KSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEK 1619
Cdd:PTZ00121 1426 KAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
301-650 |
6.88e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.61 E-value: 6.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 301 AGAVPANLKPSKIKHRADSKESLKAAPKTAMSKLAKREEVLEEGAKEARSELAKELAKSEKKAKEPSEKPPEKPSKPERV 380
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL 1410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 381 RTESSEALKAEKRKLIKDKVGK-KHLKEKISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKF 459
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKK 1490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 460 SKPDLKPFTPEVRKTL-YKAKAPGRLKVDKGRAARGEKELSSEPRTPPAQKGAAPPPAASGHRELALSSPEDLTQDFEEL 538
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAeAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAK 1570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 539 KREERGLLA-----EPRDTELGEKPLPADASEQGRPSTAIQVTQPPASVLEQEQVEREKEVVPDFPEDKGSKNRAPDSGA 613
Cdd:PTZ00121 1571 KAEEDKNMAlrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
330 340 350
....*....|....*....|....*....|....*..
gi 291045426 614 EVEREKETWEERKPREAELTPENIAAAREESEPEVKE 650
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
309-650 |
3.57e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 3.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 309 KPSKIKHRADSKESLKAAPKTAMSKLAKREEVLEEGAKEARSELAKELAKSEKKAKEPSEKPPEKpSKPERVRTESSEAL 388
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA-KKADEAKKKAEEAK 1457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 389 KAEK-RKLIKDKVGKKHLKEKISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKfsKPDLKPF 467
Cdd:PTZ00121 1458 KAEEaKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAK--KAEEAKK 1535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 468 TPEVRKTLYKAKAPGRLKVDKGRAA----RGEKELSSEPRTPPAQKGAAPPPAASGHR--ELALSSPEDLTQDFEELKRE 541
Cdd:PTZ00121 1536 ADEAKKAEEKKKADELKKAEELKKAeekkKAEEAKKAEEDKNMALRKAEEAKKAEEARieEVMKLYEEEKKMKAEEAKKA 1615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 542 E--RGLLAEPRDTELGEKP---LPADASEQGRPSTAIQVTQPPASVLEQE---QVEREKEVVPDFPEDKGSKNRAPDSGA 613
Cdd:PTZ00121 1616 EeaKIKAEELKKAEEEKKKveqLKKKEAEEKKKAEELKKAEEENKIKAAEeakKAEEDKKKAEEAKKAEEDEKKAAEALK 1695
|
330 340 350
....*....|....*....|....*....|....*....
gi 291045426 614 EVEREKETWEERKPREAE--LTPENIAAAREESEPEVKE 650
Cdd:PTZ00121 1696 KEAEEAKKAEELKKKEAEekKKAEELKKAEEENKIKAEE 1734
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
311-761 |
1.25e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 311 SKIKHRADSKESLKAAPKTAMSKLAKREEV-----LEEGAKEARSELAKELAKSEKKAKEPSEKPPEKPSKPERVRTESS 385
Cdd:PTZ00121 1260 ARMAHFARRQAAIKAEEARKADELKKAEEKkkadeAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAE 1339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 386 EALKAEKRKLIKDKVGKKHLKEKISKLEEKRDKEKKEIKKERKELKKEEGRKEEKKDAKKDEKRKDTKPELKKFSKP--- 462
Cdd:PTZ00121 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAkkk 1419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 463 --DLKPFTPEVRKT-LYKAKAPGRLKVD--------KGRAARGEKELSSEPRTPPAQKGAAPPPAASGHRELA------- 524
Cdd:PTZ00121 1420 adEAKKKAEEKKKAdEAKKKAEEAKKADeakkkaeeAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAeeakkka 1499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 525 --LSSPEDLTQDFEELKR-EERGLLAEPRDTELGEKPLPADASEQGRPSTAIQVTQPPASVLEQEQVEREKEVvpdfPED 601
Cdd:PTZ00121 1500 deAKKAAEAKKKADEAKKaEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA----EED 1575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 602 KGSKNRAPDSGAEVErEKETWEERKPREAELTPENIAAAREESEPEVKEDVIEKAELEEMEEVHPSDEEEEETKAESFYQ 681
Cdd:PTZ00121 1576 KNMALRKAEEAKKAE-EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKK 1654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 682 KHMQEALKVIPKGREALGGRELGFQGKAPEKETASFLSSLATPAGAAEHVSYIQDEtipgysETEQTISDEEIHDEPDER 761
Cdd:PTZ00121 1655 AEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKK------EAEEKKKAEELKKAEEEN 1728
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1748-2117 |
3.11e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 3.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1748 PVGLPPEEEDKLTRSPFEIISPPASPPEMTGQRVPSAPGQESPVPDTKSTPPTRNEPTTPSWLAEIPPWVPKDRPLPPAP 1827
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1828 LSPAPAPPTPAPDPHAPapfSWGIAEY----DSVVAAVQEGAAELEGGPYSPLGKDY---RKAEGEREGEGGAGAPDSSS 1900
Cdd:PHA03307 152 PPAAGASPAAVASDAAS---SRQAALPlsspEETARAPSSPPAEPPPSTPPAAASPRpprRSSPISASASSPAPAPGRSA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1901 FSSKVPEVTESHTTRDAEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGDWPPHLSTKEEAAGR 1980
Cdd:PHA03307 229 ADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1981 NKSAEKeLSSAVSPPNLHSDTPTFSYASLAGPTIPPRQEPEPGPNvePSFTPPAVPPRAPISLSQDPSPPLNGSTTSCGP 2060
Cdd:PHA03307 309 PSSPRA-SSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPS--PSRPPPPADPSSPRKRPRPSRAPSSPAASAGRP 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 291045426 2061 DRRTPSPKEAGRSHWDDGTNDSDLEKGAREQPEKETQSPSPHHPMPVGHPS--LWPETE 2117
Cdd:PHA03307 386 TRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSgePWPGSP 444
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1752-2284 |
1.66e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1752 PPEEedkltRSPFeiISPPASPPEMTGQRVPSAPGQESPVPDTKSTPPTRNEPTTP---SWLAEIPPWVPKDRPLPPAPL 1828
Cdd:PHA03247 2483 PAEA-----RFPF--AAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmlTWIRGLEELASDDAGDPPPPL 2555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1829 SPAPAPptpapdphapapfswgiAEYDSVVAAVQEGAAELEGGPYSplgKDYRKAEGEREGEGGAGAPDSSSFSSKVPev 1908
Cdd:PHA03247 2556 PPAAPP-----------------AAPDRSVPPPRPAPRPSEPAVTS---RARRPDAPPQSARPRAPVDDRGDPRGPAP-- 2613
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1909 tESHTTRDAEQTEPEQREPTPYPDErsfqyadiyeqmmlTGLGPACPTREPPLGASGDWPPHLSTKEEAagRNKSAEKEL 1988
Cdd:PHA03247 2614 -PSPLPPDTHAPDPPPPSPSPAANE--------------PDPHPPPTVPPPERPRDDPAPGRVSRPRRA--RRLGRAAQA 2676
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1989 SSAVSPPNLHSDTPTF-SYASLAGPTIPPRqEPEPGPNVEPSFTPPAVPPRA------PISLSQDPSPPLNGSTTSCGPD 2061
Cdd:PHA03247 2677 SSPPQRPRRRAARPTVgSLTSLADPPPPPP-TPEPAPHALVSATPLPPGPAAarqaspALPAAPAPPAVPAGPATPGGPA 2755
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2062 RRTPSPKEAGRShwddgtndSDLEKGAREQPEKETQSPSPHHPMPVGHPSLWPETEAHSSLSSDSHLGPVRPSLDFPASA 2141
Cdd:PHA03247 2756 RPARPPTTAGPP--------APAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP 2827
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2142 FG--FSSLQPAPPQLPSPAEPRSAPCGSLAFSGD-------RALALVPGTPTRTRhdeyLEVTKAPSLDSSLPQLPSPSS 2212
Cdd:PHA03247 2828 LPppTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrppsRSPAAKPAAPARPP----VRRLARPAVSRSTESFALPPD 2903
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 291045426 2213 PGAPllsnLPRPASPAlsegsssEATTPVISSVAERFPPGLEVAEQSSGELGPGNEPAAHSlwDLTPLSPAP 2284
Cdd:PHA03247 2904 QPER----PPQPQAPP-------PPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAG--EPSGAVPQP 2962
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1341-1616 |
2.22e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.35 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1341 KEKELERKS--ETLQQKDQILSEKAALVQRDSVMHQKDEALDEENKpgGQQDKTSEQKGRDLDKKDTAVELGKGPEPKGK 1418
Cdd:TIGR00618 159 KAKSKEKKEllMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQ--LLTLCTPCMPDTYHERKQVLEKELKHLREALQ 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1419 DLYLEDQGLAEKDKALEQRGA---ALQQTQAPEPRARAQEHRdLEQKDEHLELRDK----TPEEKDKVLVLEDRAPEHII 1491
Cdd:TIGR00618 237 QTQQSHAYLTQKREAQEEQLKkqqLLKQLRARIEELRAQEAV-LEETQERINRARKaaplAAHIKAVTQIEQQAQRIHTE 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1492 PQPTQTDRAPEhRSKVDKEQKDEASEEKEQVLEQKDWAREKEGAalDQDNRAAGQKDGTLKED------KTQGQKSSFLE 1565
Cdd:TIGR00618 316 LQSKMRSRAKL-LMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIR--DAHEVATSIREISCQQHtltqhiHTLQQQKTTLT 392
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 291045426 1566 DKSTTPKEMtLDQKSPEKAK--------GVEQQDGAVPEKTRALGLEESPEEEGKAREQ 1616
Cdd:TIGR00618 393 QKLQSLCKE-LDILQREQATidtrtsafRDLQGQLAHAKKQQELQQRYAELCAAAITCT 450
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1334-1619 |
2.51e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.97 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1334 EDRATEQKEKELERKSETLQQKDQIL------------SEKAAL----VQRDSVMHQKDEALDEENKPGGQQDKTSEQKG 1397
Cdd:pfam02463 167 LKRKKKEALKKLIEETENLAELIIDLeelklqelklkeQAKKALeyyqLKEKLELEEEYLLYLDYLKLNEERIDLLQELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1398 RDLDKKDtavELGKGPEPKGKDLY---LEDQGLAEKDKALEQRGAALQQTQAPEPR-----ARAQEHRDLEQKDEHLElr 1469
Cdd:pfam02463 247 RDEQEEI---ESSKQEIEKEEEKLaqvLKENKEEEKEKKLQEEELKLLAKEEEELKsellkLERRKVDDEEKLKESEK-- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1470 DKTPEEKDKVLVLEDRAPEHIIPQPTQTDRAPEHRSKVDKEQKDEASEEKEQVLE---QKDWAREKEGAALDQDNRAagQ 1546
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLakkKLESERLSSAAKLKEEELE--L 399
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 291045426 1547 KDGTLKEDKTQGQKSSFLED-----KSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEK 1619
Cdd:pfam02463 400 KSEEEKEAQLLLELARQLEDllkeeKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKET 477
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2208-2625 |
3.48e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.47 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2208 PSPSSPGAPLLSNLPRPASPA---LSEGSSSEATTPVISSvaerFPPGLE-VAEQSSGELGPGNEPAAHSL---WDLTPL 2280
Cdd:PHA03247 2496 PDPGGGGPPDPDAPPAPSRLApaiLPDEPVGEPVHPRMLT----WIRGLEeLASDDAGDPPPPLPPAAPPAapdRSVPPP 2571
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2281 SPAPLASRDLAPAPAPAPAPSLPGNLGDGTLSCRPECSGELTKKPSPFLSHSGDHEANGPGETSLNPPGFATATAEKEEA 2360
Cdd:PHA03247 2572 RPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2361 EALH-AWERGSWPEGAERSSRPDTLLSSEQRPGKSSGGPPC-SLSSEVEAGPQGCATDPRPHcgELSPSFLNPPLPPSTD 2438
Cdd:PHA03247 2652 PRDDpAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPH--ALVSATPLPPGPAAAR 2729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2439 DSDLSTEEARLAGKGGRRRAGRPGATGGPCPMADETPPTSASDSGSSQSDSDVPPETEECPSITAEAALDSDEDGDFLPV 2518
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2519 ---DKAGGVSGTHHPRPGHDPPPAPLPDPRPPPPRPDVCMADPEGLSSESGRVErlrekvqgrpgRKAPGRAKPASPARR 2595
Cdd:PHA03247 2810 avlAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVR-----------RRPPSRSPAAKPAAP 2878
|
410 420 430
....*....|....*....|....*....|
gi 291045426 2596 LDIRGKRSPTPgkgPVDRTSRALPRPRSTP 2625
Cdd:PHA03247 2879 ARPPVRRLARP---AVSRSTESFALPPDQP 2905
|
|
| ComEC |
COG2333 |
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily ... |
46-149 |
4.96e-04 |
|
DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 441904 [Multi-domain] Cd Length: 253 Bit Score: 44.46 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 46 GRGDSALF-AVNGFNILVDGGSDRKSCFWKLV-------RHLDRIDSVLLTHIGADNLPGINGLLQR-KVAELEE-EQSQ 115
Cdd:COG2333 9 GQGDAILIrTPDGKTILIDTGPRPSFDAGERVvlpylraLGIRRLDLLVLTHPDADHIGGLAAVLEAfPVGRVLVsGPPD 88
|
90 100 110
....*....|....*....|....*....|....
gi 291045426 116 GSSSYSDWVKNLISPELGVVFFNVPDKLRLPDAS 149
Cdd:COG2333 89 TSETYERLLEALKEKGIPVRPCRAGDTWQLGGVR 122
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
1335-1619 |
6.52e-04 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 45.24 E-value: 6.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1335 DRATEQKEKELERKSETLQQKDQIlsEKAALVQRDSVMHQKDEALDEENKPGGQQDKTSEQKGRDLDKKDTAVELGkgpe 1414
Cdd:pfam02029 66 DRTAKREERRQKRLQEALERQKEF--DPTIADEKESVAERKENNEEEENSSWEKEEKRDSRLGRYKEEETEIREKE---- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1415 pkgkdlyLEDQGLAEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQKDEHLelrDKTPEEKDKVLVLEDRAPEHIIPQP 1494
Cdd:pfam02029 140 -------YQENKWSTEVRQAEEEGEEEEDKSEEAEEVPTENFAKEEVKDEKI---KKEKKVKYESKVFLDQKRGHPEVKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1495 ------TQTDRAPEHRSKVDKEQKDEASEEKEQVLEQkdwarekeGAALDQDNRAAGQKDGTLKEDKTQGQKSSFLEDKS 1568
Cdd:pfam02029 210 qngeeeVTKLKVTTKRRQGGLSQSQEREEEAEVFLEA--------EQKLEELRRRRQEKESEEFEKLRQKQQEAELELEE 281
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 291045426 1569 ttpkemtLDQKSPEKAKGVEQQdgavpEKTRalgleESPEEEGKAREQEEK 1619
Cdd:pfam02029 282 -------LKKKREERRKLLEEE-----EQRR-----KQEEAERKLREEEEK 315
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
309-650 |
1.27e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 309 KPSKIKHRADS-KESLKAAPKTAMSKLAKREEVLEEGAKEARSELAKELAKSEKKAKEPSEKPPEKPSKPERVRtESSEA 387
Cdd:PTZ00121 1491 KAEEAKKKADEaKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKK-KAEEA 1569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 388 LKAEKRKL-------IKDKVGKKHLKEKISKLEEKRDKEKKEIKKERKELKKEEGRKEEKkdakkdekrkdtkpELKKFS 460
Cdd:PTZ00121 1570 KKAEEDKNmalrkaeEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE--------------EEKKKV 1635
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 461 KPDLKPFTPEVRKTLYKAKAPGRLKVDKGRAARGEKE---LSSEPRTPPAQKGAAppPAASGHRELALSSPEDLTQDFEE 537
Cdd:PTZ00121 1636 EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEdkkKAEEAKKAEEDEKKA--AEALKKEAEEAKKAEELKKKEAE 1713
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 538 LKREERGLLAEPRDTELGEKPLPADASEQGRPSTAIQVTQPPASVLEQEQVEREKEVvpdfPEDKGSKNRAPDSGAEVER 617
Cdd:PTZ00121 1714 EKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKA----EEIRKEKEAVIEEELDEED 1789
|
330 340 350
....*....|....*....|....*....|....
gi 291045426 618 EKETWE-ERKPREAELTPENIAAAREESEPEVKE 650
Cdd:PTZ00121 1790 EKRRMEvDKKIKDIFDNFANIIEGGKEGNLVIND 1823
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
1991-2245 |
1.78e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.92 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1991 AVSPPNLHSDTPTFSYASLAGPTIPPRQEPePGPNVEPSFTPPAVPPRaPISLSQDPSPPLNGSTTSCGPDRRTPSPKEA 2070
Cdd:PRK10263 315 PITEPVAVAAAATTATQSWAAPVEPVTQTP-PVASVDVPPAQPTVAWQ-PVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQ 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2071 GRSHWDDGTNDSDLEKGAREQPEKETQSPSPHHPMPVGHPSLWPETEAHSSLSSDSHLGPVRPSLDFPASAFGFSSLQPA 2150
Cdd:PRK10263 393 YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPA 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2151 PPQlPSPAEPRSAPCGSLAFSGDRALALVPGTP----------TRTRHDEYLEVTKAPsldsslpqLPSPSSPGAPLLSN 2220
Cdd:PRK10263 473 AQE-PLYQQPQPVEQQPVVEPEPVVEETKPARPplyyfeeveeKRAREREQLAAWYQP--------IPEPVKEPEPIKSS 543
|
250 260
....*....|....*....|....*
gi 291045426 2221 LPRPASPALSEGSSSEATTPVISSV 2245
Cdd:PRK10263 544 LKAPSVAAVPPVEAAAAVSPLASGV 568
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1320-1619 |
2.39e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1320 EDLAMEWGGKAPGSEDRATEQKEKELERKSETLQQKDQilSEKAALVQRDSVMHQKDEALDEENKPGGQQDKTSEQKGRd 1399
Cdd:PTZ00121 1107 ETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEE--ARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARK- 1183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1400 ldkkdtAVELGKGPEPKGKdlylEDQGLAEKDKALEQRGAALQQTQAPEPRaRAQEHRDLEQKDEHLELRDKTPEEKDKV 1479
Cdd:PTZ00121 1184 ------AEEVRKAEELRKA----EDARKAEAARKAEEERKAEEARKAEDAK-KAEAVKKAEEAKKDAEEAKKAEEERNNE 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1480 LVLEDRAPEHIIPQPTQTDRAPEHRSKVDKEQKdeaSEEKEQVLEQKDWAREKEGAALDQDNRAAGQKDGTLKEDKTQGQ 1559
Cdd:PTZ00121 1253 EIRKFEEARMAHFARRQAAIKAEEARKADELKK---AEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1560 KSSFLEDKSTTPKEMTLDQKSPEKAKGVEQQdgAVPEKTRALGLEESpEEEGKAREQEEK 1619
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAE--AAEEKAEAAEKKKE-EAKKKADAAKKK 1386
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1336-1631 |
2.58e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.39 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1336 RATEQKEKELERKSETLQQKDQILSEKAALVQRDsVMHQKDEALDEENkpggQQDKTSEQKGRDLDKKDTAVElgkgpep 1415
Cdd:COG1196 270 EELRLELEELELELEEAQAEEYELLAELARLEQD-IARLEERRRELEE----RLEELEEELAELEEELEELEE------- 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1416 kgkDLYLEDQGLAEKDKALEQRGAALQQTQApepRARAQEHRDLEQKDEHLELRDKTPEEKDKVLVLEDRapehiIPQPT 1495
Cdd:COG1196 338 ---ELEELEEELEEAEEELEEAEAELAEAEE---ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ-----LEELE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1496 QTDRAPEHRSKVDKEQKDEASEEKEQVLEQKDWAREKEGAALDQDNRAAGQKDGTLKEDKTQGQKSSFLEdksttpkemt 1575
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE---------- 476
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 291045426 1576 ldqkspekakgvEQQDGAVPEKTRALGLEESPEEEGKAREQEEKYWKEQDVVQGWR 1631
Cdd:COG1196 477 ------------AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1911-2242 |
2.93e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1911 SHTTRDAEQTEPEQREPTPYPDERSFQYADIYEQMMLTGLGPACPTREPPLGASGdwPPHLSTKEEAAGRNKSAEKELSS 1990
Cdd:pfam03154 131 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPS--PPPPGTTQAATAGPTPSAPSVPP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1991 AVSPPNLHSDTPTFSYAS-----LAGPTIPPRQEPEPGPNVEPsFTPPAVPPRAPI-----------------------S 2042
Cdd:pfam03154 209 QGSPATSQPPNQTQSTAAphtliQQTPTLHPQRLPSPHPPLQP-MTQPPPPSQVSPqplpqpslhgqmppmphslqtgpS 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2043 LSQDPSPPLNGSTTSCGPDRRTPSPKEAGRSHWDDGTNDSDLEKGAREQPEKETQSPSPHHPMPVGHPSLWPETEAHSSL 2122
Cdd:pfam03154 288 HMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLP 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2123 SSDSHLGPVRPSLDFPasaFGFSSLQPAPP------QLPSPAEPRSAPCGSLAFSGDRALALVPGTPTRTRHDEYLEVTK 2196
Cdd:pfam03154 368 NPQSHKHPPHLSGPSP---FQMNSNLPPPPalkplsSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPA 444
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 291045426 2197 A--PSLDSSLPQLPSPSSPGAPLLSNLPRPASPALSEGSSSEATTPVI 2242
Cdd:pfam03154 445 AshPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGI 492
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1342-1554 |
3.30e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 43.02 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1342 EKELERKSETLQQ-KDQILSEKAAL-VQRDSVMHQKDEALDEENKPGGQQDKTSEQKGRDLDKKDTAV-ELGKGPEPKGK 1418
Cdd:COG5185 369 EVELSKSSEELDSfKDTIESTKESLdEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQIEQATSSNeEVSKLLNELIS 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1419 DLYLEDQGL-AEKDKALEQRGAALQQTQAPEPRARAQEHRDLEQ-----KDEHLELRDKTPEEKDKVLVLEDRAPEHIip 1492
Cdd:COG5185 449 ELNKVMREAdEESQSRLEEAYDEINRSVRSKKEDLNEELTQIESrvstlKATLEKLRAKLERQLEGVRSKLDQVAESL-- 526
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 291045426 1493 QPTQTDRAPEHrsKVDKEQKDEASEEKEQvleQKDWAREKEGAALDQDNRAAGQKDGTLKED 1554
Cdd:COG5185 527 KDFMRARGYAH--ILALENLIPASELIQA---SNAKTDGQAANLRTAVIDELTQYLSTIESQ 583
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1995-2284 |
5.52e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 5.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1995 PNLHSDTPTFSYASLAGPTIP---PRQEPEPGPNVEPSFTPPAVpprapiSLSQDPSPPLNGSTTSCGPDRRTPSPKeag 2071
Cdd:pfam05109 425 PESTTTSPTLNTTGFAAPNTTtglPSSTHVPTNLTAPASTGPTV------STADVTSPTPAGTTSGASPVTPSPSPR--- 495
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2072 rshwDDGTNDSDLEKGAreqPEKETQSPSPHHPMPVghpslwPETEAHSSLSSDSHLGPVRPSldfpasafgfSSLQPAP 2151
Cdd:pfam05109 496 ----DNGTESKAPDMTS---PTSAVTTPTPNATSPT------PAVTTPTPNATSPTLGKTSPT----------SAVTTPT 552
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2152 PQL--PSPAEPRSAPCGSLAFSGDRALALVPGTPTRTrhdeylevTKAPSLDSSLPQLPSPS-----SPGAPLLSNLPRP 2224
Cdd:pfam05109 553 PNAtsPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPN--------ATSPTVGETSPQANTTNhtlggTSSTPVVTSPPKN 624
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291045426 2225 ASPALSEG-----------------SSSEATTPVISSVAERFPPGLEVAEQSSGELGPGNEPAAHSLWDLTPLSPAP 2284
Cdd:pfam05109 625 ATSAVTTGqhnitssstssmslrpsSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAP 701
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2149-2436 |
6.81e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 6.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2149 PAPPQLPSPAEPRSAPCGSLAFSGDRALALVPGTPTRTrhdeylevtKAPSLDSSLPQLPSPSSPGAPLLSNLPRPASPA 2228
Cdd:PHA03307 115 DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASP---------PAAGASPAAVASDAASSRQAALPLSSPEETARA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2229 LSegssseattpvissvaerfPPGLEVAEQSSGELGPGNEPAAHSLWDLTPLSPAPLASRDLAPAPAPAPAPSLPGNLGD 2308
Cdd:PHA03307 186 PS-------------------SPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSG 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2309 GTLSCRPECSGeltKKPSPFLSHSGDHEANGPGETSlnpPGFATATAEKEEAEALHAWERGSWPEGAERSSRPDTLLSSE 2388
Cdd:PHA03307 247 CGWGPENECPL---PRPAPITLPTRIWEASGWNGPS---SRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSS 320
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 291045426 2389 QRPGKSSGgppcslSSEVEAGPQGCATDPRPHCGEL-SPSFLNPPLPPS 2436
Cdd:PHA03307 321 SRESSSSS------TSSSSESSRGAAVSPGPSPSRSpSPSRPPPPADPS 363
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1951-2112 |
7.36e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.98 E-value: 7.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1951 GPACP-TREPPLGASGDWPPHLSTK-----EEAAGRNKsaeKELSSAVSPPNLHSDTPTFSYASLAGPTIPPRQEPEPGP 2024
Cdd:PTZ00449 650 GPKIIkSPKPPKSPKPPFDPKFKEKfyddyLDAAAKSK---ETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLP 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 2025 NVEPS-FTPPAVPPRAPISLSQDPSPPLNGSTTSCGPDRRTPSPkeaGRSHWDDGTNDSDLEKGAREQPEKETQSPSPHH 2103
Cdd:PTZ00449 727 RDEEFpFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLP---DILAEEFKEEDIHAETGEPDEAMKRPDSPSEHE 803
|
170
....*....|
gi 291045426 2104 PMPVG-HPSL 2112
Cdd:PTZ00449 804 DKPPGdHPSL 813
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1334-1641 |
7.71e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 7.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1334 EDRATEQKEKELERKSETLQQKDQILSEKAALVQRDSVMHQKDEALDEENKPGGQQDKTSEQKgRDLDK---KDTAVELG 1410
Cdd:pfam17380 297 EQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERK-RELERirqEEIAMEIS 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1411 KGPEPKgkDLYLEDQG----------LAEKDKALE-QRGAALQQTQAPEPRARAQEHRDLEQKDEHLELRDKTPEEKDKV 1479
Cdd:pfam17380 376 RMRELE--RLQMERQQknervrqeleAARKVKILEeERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRL 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1480 LVLEDRAPEHIIPQPTQTDRAPEHRSKVDKEQKDEASEEKEQVLEQKdwAREKEGAALDQDNraagqKDGTLKEDKTQGQ 1559
Cdd:pfam17380 454 EEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKE--LEERKQAMIEEER-----KRKLLEKEMEERQ 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291045426 1560 KSSFLEDKSTTPKEMTLDQKSPEKAKGVEQQDGAVPEKTRALGLEESPEEEGKAREQEEKYWKEQDVVqgwreTSPTRGE 1639
Cdd:pfam17380 527 KAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYEAT-----TPITTIK 601
|
..
gi 291045426 1640 PV 1641
Cdd:pfam17380 602 PI 603
|
|
| |
