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Conserved domains on  [gi|386770412|ref|NP_001246580|]
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Myocardin-related transcription factor, isoform D [Drosophila melanogaster]

Protein Classification

SAP domain-containing protein( domain architecture ID 10653801)

SAP (SAF-A/B, Acinus and PIAS) domain-containing protein may bind DNA or RNA and act as a transcriptional regulator

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 578-612 2.89e-10

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


:

Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 56.64  E-value: 2.89e-10
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 386770412   578 LEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYL 612
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
94-119 2.64e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 2.64e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412     94 DLLKAKIQQRPNREDLERLHILEEDE 119
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
140-165 5.34e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 44.39  E-value: 5.34e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412    140 DQLNSQIQHRPGPLELIKKNILHTEK 165
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
 
Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 578-612 2.89e-10

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 56.64  E-value: 2.89e-10
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 386770412   578 LEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYL 612
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
SAP smart00513
Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;
578-612 1.97e-07

Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;


Pssm-ID: 128789 [Multi-domain]  Cd Length: 35  Bit Score: 48.64  E-value: 1.97e-07
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 386770412    578 LEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYL 612
Cdd:smart00513    1 LAKLKVSELKDELKKRGLSTSGTKAELVDRLLEAL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
94-119 2.64e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 2.64e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412     94 DLLKAKIQQRPNREDLERLHILEEDE 119
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
140-165 5.34e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 44.39  E-value: 5.34e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412    140 DQLNSQIQHRPGPLELIKKNILHTEK 165
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 142-164 1.67e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 39.95  E-value: 1.67e-04
                           10        20
                   ....*....|....*....|...
gi 386770412   142 LNSQIQHRPGPLELIKKNILHTE 164
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 96-118 3.83e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 38.79  E-value: 3.83e-04
                           10        20
                   ....*....|....*....|...
gi 386770412    96 LKAKIQQRPNREDLERLHILEED 118
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
 
Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 578-612 2.89e-10

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 56.64  E-value: 2.89e-10
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 386770412   578 LEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYL 612
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
SAP smart00513
Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;
578-612 1.97e-07

Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;


Pssm-ID: 128789 [Multi-domain]  Cd Length: 35  Bit Score: 48.64  E-value: 1.97e-07
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 386770412    578 LEKMKVSDLKQHLKRRNLPVSGPKPHLIERLKPYL 612
Cdd:smart00513    1 LAKLKVSELKDELKKRGLSTSGTKAELVDRLLEAL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
94-119 2.64e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 2.64e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412     94 DLLKAKIQQRPNREDLERLHILEEDE 119
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
140-165 5.34e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 44.39  E-value: 5.34e-06
                            10        20
                    ....*....|....*....|....*.
gi 386770412    140 DQLNSQIQHRPGPLELIKKNILHTEK 165
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 142-164 1.67e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 39.95  E-value: 1.67e-04
                           10        20
                   ....*....|....*....|...
gi 386770412   142 LNSQIQHRPGPLELIKKNILHTE 164
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 96-118 3.83e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 38.79  E-value: 3.83e-04
                           10        20
                   ....*....|....*....|...
gi 386770412    96 LKAKIQQRPNREDLERLHILEED 118
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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