mextli, isoform E [Drosophila melanogaster]
Protein Classification
eukaryotic translation initiation factor 4E-binding protein Mextli( domain architecture ID 16910775)
eukaryotic translation initiation factor 4E-binding protein Mextli plays a role in promoting translation
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| KH-I_Mextli_like | cd22454 | type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic ... |
225-296 | 5.42e-30 | ||
type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic translation initiation factor 4E-binding protein Mextli and similar proteins; Mextli is a novel eukaryotic translation initiation factor 4E-binding protein that promotes translation in Drosophila melanogaster. : Pssm-ID: 411882 [Multi-domain] Cd Length: 71 Bit Score: 112.79 E-value: 5.42e-30
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| KH-I_Mextli_like | cd22454 | type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic ... |
225-296 | 5.42e-30 | ||
type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic translation initiation factor 4E-binding protein Mextli and similar proteins; Mextli is a novel eukaryotic translation initiation factor 4E-binding protein that promotes translation in Drosophila melanogaster. Pssm-ID: 411882 [Multi-domain] Cd Length: 71 Bit Score: 112.79 E-value: 5.42e-30
|
||||||
| KH_1 | pfam00013 | KH domain; KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause ... |
231-294 | 6.20e-07 | ||
KH domain; KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia. Pssm-ID: 459630 [Multi-domain] Cd Length: 65 Bit Score: 46.89 E-value: 6.20e-07
|
||||||
| KH | smart00322 | K homology RNA-binding domain; |
229-296 | 1.36e-05 | ||
K homology RNA-binding domain; Pssm-ID: 197652 [Multi-domain] Cd Length: 68 Bit Score: 43.05 E-value: 1.36e-05
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| KH-I_Mextli_like | cd22454 | type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic ... |
225-296 | 5.42e-30 | ||
type I K homology (KH) RNA-binding domain found in Drosophila melanogaster eukaryotic translation initiation factor 4E-binding protein Mextli and similar proteins; Mextli is a novel eukaryotic translation initiation factor 4E-binding protein that promotes translation in Drosophila melanogaster. Pssm-ID: 411882 [Multi-domain] Cd Length: 71 Bit Score: 112.79 E-value: 5.42e-30
|
||||||
| KH-I | cd00105 | K homology (KH) RNA-binding domain, type I; KH binds single-stranded RNA or DNA. It is found ... |
230-293 | 2.36e-08 | ||
K homology (KH) RNA-binding domain, type I; KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that belong to different protein folds, but they share a single KH motif. The KH motif is folded into a beta alpha alpha beta unit. In addition to the core, type II KH domains (e.g. ribosomal protein S3) include an N-terminal extension and type I KH domains (e.g. hnRNP K) contain a C-terminal extension. Some KH-I superfamily members contain a divergent KH domain that lacks the RNA-binding GXXG motif. Some others have a mutated GXXG motif which may or may not have nucleic acid binding ability. Pssm-ID: 411802 [Multi-domain] Cd Length: 63 Bit Score: 50.76 E-value: 2.36e-08
|
||||||
| KH_1 | pfam00013 | KH domain; KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause ... |
231-294 | 6.20e-07 | ||
KH domain; KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia. Pssm-ID: 459630 [Multi-domain] Cd Length: 65 Bit Score: 46.89 E-value: 6.20e-07
|
||||||
| KH-I_HNRNPK_rpt3 | cd22434 | third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ... |
231-299 | 9.92e-06 | ||
third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins; hnRNP K, also called transformation up-regulated nuclear protein (TUNP), is a pre-mRNA binding protein that binds tenaciously to poly(C) sequences. It may be involved in the nuclear metabolism of hnRNAs, particularly for pre-mRNAs that contain cytidine-rich sequences. It can also bind poly(C) single-stranded DNA. hnRNP K plays an important role in p53/TP53 response to DNA damage, acting at the level of both transcription activation and repression. hnRNP K contains three K-homology (KH) RNA-binding domains. The model corresponds to the third one. Pssm-ID: 411862 [Multi-domain] Cd Length: 74 Bit Score: 43.85 E-value: 9.92e-06
|
||||||
| KH | smart00322 | K homology RNA-binding domain; |
229-296 | 1.36e-05 | ||
K homology RNA-binding domain; Pssm-ID: 197652 [Multi-domain] Cd Length: 68 Bit Score: 43.05 E-value: 1.36e-05
|
||||||
| Blast search parameters | ||||
|
