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Conserved domains on  [gi|544346109|ref|NP_001269672|]
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SPATS2-like protein isoform c [Homo sapiens]

Protein Classification

DUF1387 domain-containing protein( domain architecture ID 12073490)

DUF1387 domain-containing protein similar to Homo sapiens spermatogenesis-associated serine-rich protein 2 (SPATS2) that may play an important role in development of testicular germ cells

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 1-308 4.42e-124

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


:

Pssm-ID: 462100  Cd Length: 311  Bit Score: 364.83  E-value: 4.42e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109    1 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQiqNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEP 80
Cdd:pfam07139   3 VTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGGIN--NDHENGCSFDTESVDSLSEILDSESTEAAALGGPES 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109   81 SKALRGVTEGnRLLQQKLSLDGNPKPIHGTtERSDGLQWSAEQP-CNPSKPKAKTSPVKSNTPAAhLEIKPDEL-----A 154
Cdd:pfam07139  81 SSSRLANGIS-DLEDPKCSADAEPQAVSHS-APSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgssiE 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109  155 KKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAE 234
Cdd:pfam07139 158 KKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKKAE 237

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 544346109  235 ELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS 308
Cdd:pfam07139 238 ELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 1-308 4.42e-124

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


Pssm-ID: 462100  Cd Length: 311  Bit Score: 364.83  E-value: 4.42e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109    1 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQiqNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEP 80
Cdd:pfam07139   3 VTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGGIN--NDHENGCSFDTESVDSLSEILDSESTEAAALGGPES 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109   81 SKALRGVTEGnRLLQQKLSLDGNPKPIHGTtERSDGLQWSAEQP-CNPSKPKAKTSPVKSNTPAAhLEIKPDEL-----A 154
Cdd:pfam07139  81 SSSRLANGIS-DLEDPKCSADAEPQAVSHS-APSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgssiE 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109  155 KKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAE 234
Cdd:pfam07139 158 KKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKKAE 237

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 544346109  235 ELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS 308
Cdd:pfam07139 238 ELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 1-308 4.42e-124

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


Pssm-ID: 462100  Cd Length: 311  Bit Score: 364.83  E-value: 4.42e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109    1 MTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEAGPLQPQPPQiqNGPMNGCEKDSSSTDSANEKPALIPREKKISILEEP 80
Cdd:pfam07139   3 VTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGGIN--NDHENGCSFDTESVDSLSEILDSESTEAAALGGPES 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109   81 SKALRGVTEGnRLLQQKLSLDGNPKPIHGTtERSDGLQWSAEQP-CNPSKPKAKTSPVKSNTPAAhLEIKPDEL-----A 154
Cdd:pfam07139  81 SSSRLANGIS-DLEDPKCSADAEPQAVSHS-APSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgssiE 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346109  155 KKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMEILTARQKKAE 234
Cdd:pfam07139 158 KKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKKAE 237

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 544346109  235 ELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQIMLCGEITHPKNNYSSRTPCS 308
Cdd:pfam07139 238 ELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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