|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
106-458 |
5.18e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 112.33 E-value: 5.18e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 106 LRTFNSTGGQWKGDFQVITAMDLSSNQLESL--SLDNFNQLRQLDLGNNSLEVIPLSLAD-TNMSlpfvTLDLSCNKFSQ 182
Cdd:COG4886 98 LTELDLSGNEELSNLTNLESLDLSGNQLTDLpeELANLTNLKELDLSNNQLTDLPEPLGNlTNLK----SLDLSNNQLTD 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 183 ISTSFfaQRLPQLKNLNLAHNELLNISrESFYNLLELQTLVLSHNNISDIDyETFLALPNLQYLDLSHNRLSGsairalq 262
Cdd:COG4886 174 LPEEL--GNLTNLKELDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDLP-EPLANLTNLETLDLSNNQLTD------- 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 263 gIPDLVSLSiaynpdvgvamqefvaswSLKELDASGTGLCQVPAALA-QSVRTLKLSDNWLKAINcgdmdsyplLQYLDL 341
Cdd:COG4886 243 -LPELGNLT------------------NLEELDLSNNQLTDLPPLANlTNLKTLDLSNNQLTDLK---------LKELEL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 342 SHSRIAQVEDDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPPL 421
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
330 340 350
....*....|....*....|....*....|....*..
gi 665393974 422 SLPKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDN 458
Cdd:COG4886 375 LEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAV 411
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
90-460 |
1.72e-25 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 110.79 E-value: 1.72e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 90 LELNAPANKLNLTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQLRQLDLGNNSLEVIPLSLADTNMSLP 169
Cdd:COG4886 10 LKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 170 FVTLDLSCNKFSQISTSFFAQRLPQLKNLNLAHNELLNISrESFYNLLELQTLVLSHNNISDIDyETFLALPNLQYLDLS 249
Cdd:COG4886 90 TDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 250 HNRLSgsairalqGIPD-LVSLSiaynpdvgvamqefvaswSLKELDASGTGLCQVPAALAQsvrtlklsdnwLKAincg 328
Cdd:COG4886 168 NNQLT--------DLPEeLGNLT------------------NLKELDLSNNQITDLPEPLGN-----------LTN---- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 329 dmdsyplLQYLDLSHSRIAQVeDDALGRLELLESLFLDRNLLMRVPS-SLPPSLEHLFLQHNQIMELPPQAfvGLVNLQT 407
Cdd:COG4886 207 -------LEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLPElGNLTNLEELDLSNNQLTDLPPLA--NLTNLKT 276
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 665393974 408 LDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDNPI 460
Cdd:COG4886 277 LDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLL 329
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
120-470 |
4.20e-23 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 103.47 E-value: 4.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 120 FQVITAMDLSSNQLESLSLDNFNQLRQLDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLN 199
Cdd:COG4886 23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELD 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 200 LAHNELLnisresfYNLLELQTLVLSHNNISDIDYEtFLALPNLQYLDLSHNRLS--GSAIRALQgipdlvslsiaynpd 277
Cdd:COG4886 103 LSGNEEL-------SNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDLSNNQLTdlPEPLGNLT--------------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 278 vgvamqefvaswSLKELDASGTGLCQVPAALAQSVRtlklsdnwlkaincgdmdsyplLQYLDLSHSRIAQVEDdALGRL 357
Cdd:COG4886 160 ------------NLKSLDLSNNQLTDLPEELGNLTN----------------------LKELDLSNNQITDLPE-PLGNL 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 358 ELLESLFLDRNLLMRVPSSLP--PSLEHLFLQHNQIMELPpqAFVGLVNLQTLDLSNNRLiflpplslpklltLNLESSG 435
Cdd:COG4886 205 TNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQL-------------TDLPPLA 269
|
330 340 350
....*....|....*....|....*....|....*
gi 665393974 436 vesvsqsivhTLPQLRDLLLEDNPIKCSDLLGIAE 470
Cdd:COG4886 270 ----------NLTNLKTLDLSNNQLTDLKLKELEL 294
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
193-253 |
1.38e-16 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 74.87 E-value: 1.38e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 665393974 193 PQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRL 253
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
100-415 |
8.38e-15 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 79.51 E-value: 8.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 100 NLTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLES---LSLDNFNQLRQLDLGNNSLE-VIPLSLADTNmSLPFVTLdl 175
Cdd:PLN00113 119 SLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGeipNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLT-SLEFLTL-- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 176 SCNKFsqisTSFFAQRLPQLKNLNLAHNELLNISRESFYN---LLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNR 252
Cdd:PLN00113 196 ASNQL----VGQIPRELGQMKSLKWIYLGYNNLSGEIPYEiggLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 253 LSGSAIRALQGIPDLVSLSIAYN------PDVGVAMQEF-----------------VAS---------WS---------- 290
Cdd:PLN00113 272 LSGPIPPSIFSLQKLISLDLSDNslsgeiPELVIQLQNLeilhlfsnnftgkipvaLTSlprlqvlqlWSnkfsgeipkn 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 291 ------LKELDASGT--------GLC-----------------QVPAALA--QSVRTLKLSDNWLKAINCGDMDSYPLLQ 337
Cdd:PLN00113 352 lgkhnnLTVLDLSTNnltgeipeGLCssgnlfklilfsnslegEIPKSLGacRSLRRVRLQDNSFSGELPSEFTKLPLVY 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 338 YLDLSHSRIAQVEDDALGRLELLESLFLDRNllmRVPSSLPPS-----LEHLFLQHNQIMELPPQAFVGLVNLQTLDLSN 412
Cdd:PLN00113 432 FLDISNNNLQGRINSRKWDMPSLQMLSLARN---KFFGGLPDSfgskrLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508
|
...
gi 665393974 413 NRL 415
Cdd:PLN00113 509 NKL 511
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
147-461 |
2.14e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.90 E-value: 2.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 147 LDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSH 226
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 227 NNISDIDYETFLALPNLQYLDLSHNrlsgsairalqgipdlvslsiaynpdvgvamQEFVASWSLKELDASGTGLCQVPA 306
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTELDLSGN-------------------------------EELSNLTNLESLDLSGNQLTDLPE 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 307 ALAQsvrtlklsdnwLKAincgdmdsyplLQYLDLSHSRIAQVeDDALGRLELLESLFLDRNLLMRVPSSLP--PSLEHL 384
Cdd:COG4886 131 ELAN-----------LTN-----------LKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGnlTNLKEL 187
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 665393974 385 FLQHNQIMELPPqAFVGLVNLQTLDLSNNRLiflpplslpklltlnlessgvESVSQSIVHtLPQLRDLLLEDNPIK 461
Cdd:COG4886 188 DLSNNQITDLPE-PLGNLTNLEELDLSGNQL---------------------TDLPEPLAN-LTNLETLDLSNNQLT 241
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
123-395 |
3.77e-14 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 77.04 E-value: 3.77e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 123 ITAMDLSSNQLESLSLDNFNQLRQLDLGNNSLEVIPLSLADTnmslpFVTLDLSCNKFSQIstsffAQRLPQlknlnlah 202
Cdd:PRK15370 201 ITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLPDT-----IQEMELSINRITEL-----PERLPS-------- 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 203 nellnisresfynllELQTLVLSHNNISdidyetflALPN-----LQYLDLSHNRLSgsairalqgipdlvslsiaynpd 277
Cdd:PRK15370 263 ---------------ALQSLDLFHNKIS--------CLPEnlpeeLRYLSVYDNSIR----------------------- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 278 vgvAMQEFVASwSLKELDASGTGLCQVPAALAQSVRTLKLSDNwlkAINCGDMDSYPLLQYLDLSHSRIAqVEDDALGrl 357
Cdd:PRK15370 297 ---TLPAHLPS-GITHLNVQSNSLTALPETLPPGLKTLEAGEN---ALTSLPASLPPELQVLDVSKNQIT-VLPETLP-- 366
|
250 260 270
....*....|....*....|....*....|....*...
gi 665393974 358 ELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELP 395
Cdd:PRK15370 367 PTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRLP 404
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
123-380 |
5.36e-13 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 73.73 E-value: 5.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 123 ITAMDLSSNQLESL---SLDNFNQLRQLDLGNNSLE-VIPLSLADTNmSLPFVTLdlSCNKFS-QISTSFfaQRLPQLKN 197
Cdd:PLN00113 358 LTVLDLSTNNLTGEipeGLCSSGNLFKLILFSNSLEgEIPKSLGACR-SLRRVRL--QDNSFSgELPSEF--TKLPLVYF 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 198 LNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLAlPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPD 277
Cdd:PLN00113 433 LDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 278 VGVAMQEFVASWSLKELDASGTGLC-QVPAALAQsvrtlklsdnwlkaincgdmdsYPLLQYLDLSHSRIAQVEDDALGR 356
Cdd:PLN00113 512 SGEIPDELSSCKKLVSLDLSHNQLSgQIPASFSE----------------------MPVLSQLDLSQNQLSGEIPKNLGN 569
|
250 260
....*....|....*....|....
gi 665393974 357 LELLESLFLDRNLLMrvpSSLPPS 380
Cdd:PLN00113 570 VESLVQVNISHNHLH---GSLPST 590
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
110-275 |
3.89e-12 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 71.03 E-value: 3.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 110 NSTGGQWKGDF---QVITAMDLSSNQL----ESLSLDnFNQLRQLDLGNNSLEViplSLADTNMSLPFVTLDLSCNKFSQ 182
Cdd:PLN00113 414 NSFSGELPSEFtklPLVYFLDISNNNLqgriNSRKWD-MPSLQMLSLARNKFFG---GLPDSFGSKRLENLDLSRNQFSG 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 183 ISTSFFAQrLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQ 262
Cdd:PLN00113 490 AVPRKLGS-LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568
|
170
....*....|...
gi 665393974 263 GIPDLVSLSIAYN 275
Cdd:PLN00113 569 NVESLVQVNISHN 581
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
218-276 |
1.03e-11 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 61.00 E-value: 1.03e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 665393974 218 ELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNP 276
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
151-415 |
2.91e-11 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 67.95 E-value: 2.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 151 NNSLEVIPLSLADTNMS---------LPFV-TLDLSCNKFS-QISTSFFAQRlPQLKNLNLAHNELL-NISRESFYNLle 218
Cdd:PLN00113 66 NNSSRVVSIDLSGKNISgkissaifrLPYIqTINLSNNQLSgPIPDDIFTTS-SSLRYLNLSNNNFTgSIPRGSIPNL-- 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 219 lQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGvamqefvaswslkeldasg 298
Cdd:PLN00113 143 -ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG------------------- 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 299 tglcQVPAALAQsVRTLKlsdnWLkaincgdmdsypLLQYLDLSHSRIAQveddaLGRLELLESLFL-DRNLLMRVPSSL 377
Cdd:PLN00113 203 ----QIPRELGQ-MKSLK----WI------------YLGYNNLSGEIPYE-----IGGLTSLNHLDLvYNNLTGPIPSSL 256
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 665393974 378 P--PSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRL 415
Cdd:PLN00113 257 GnlKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL 296
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
334-415 |
2.81e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 56.76 E-value: 2.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 334 PLLQYLDLSHSRIAQVEDDALGRLelleslfldrnllmrvpsslpPSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNN 413
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGL---------------------SNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
..
gi 665393974 414 RL 415
Cdd:pfam13855 60 RL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
172-229 |
7.69e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.61 E-value: 7.69e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 665393974 172 TLDLSCNKFSQISTSFFaQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNI 229
Cdd:pfam13855 5 SLDLSNNRLTSLDDGAF-KGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
98-277 |
1.80e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 61.10 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 98 KLNLTHRDLRTFNSTGGQWKGdfqvITAMDLSSNQLESL--SLDNFNQLRQLDLGNNSLEVIPlSLAD-TNMSlpfvTLD 174
Cdd:COG4886 186 ELDLSNNQITDLPEPLGNLTN----LEELDLSGNQLTDLpePLANLTNLETLDLSNNQLTDLP-ELGNlTNLE----ELD 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 175 LSCNKFSQISTSFfaqRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLS 254
Cdd:COG4886 257 LSNNQLTDLPPLA---NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGL 333
|
170 180
....*....|....*....|...
gi 665393974 255 GSAIRALQGIPDLVSLSIAYNPD 277
Cdd:COG4886 334 LVTLTTLALSLSLLALLTLLLLL 356
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
124-355 |
2.44e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 60.06 E-value: 2.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 124 TAMDLSSNQLESLSLDNFNQLRQLDLGNNSLeviplsladtnmslpfvtLDLSCNKFSQISTSFFaqrlpqLKNLNLAHN 203
Cdd:cd00116 63 TGRIPRGLQSLLQGLTKGCGLQELDLSDNAL------------------GPDGCGVLESLLRSSS------LQELKLNNN 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 204 EL----LNISRESFYNLLE-LQTLVLSHNNISDIDYE----TFLALPNLQYLDLSHNRLSGSAIRAL-QGIPD---LVSL 270
Cdd:cd00116 119 GLgdrgLRLLAKGLKDLPPaLEKLVLGRNRLEGASCEalakALRANRDLKELNLANNGIGDAGIRALaEGLKAncnLEVL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 271 SI---AYNPDVGVAMQEFVASW-SLKELDASGTGLCQVPAA--------LAQSVRTLKLSDNWLKAINCGD----MDSYP 334
Cdd:cd00116 199 DLnnnGLTDEGASALAETLASLkSLEVLNLGDNNLTDAGAAalasallsPNISLLTLSLSCNDITDDGAKDlaevLAEKE 278
|
250 260
....*....|....*....|.
gi 665393974 335 LLQYLDLSHSRIAQVEDDALG 355
Cdd:cd00116 279 SLLELDLRGNKFGEEGAQLLA 299
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
315-460 |
3.65e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 58.26 E-value: 3.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 315 LKLSDNWLKAINcgDMDSYPLLQYLDLSHSRIAQVEDdaLGRLELLESLFLDRNllmRVPS------------SLPPSLE 382
Cdd:cd21340 51 LYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQ---RLPPgekltfdprslaALSNSLR 123
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 665393974 383 HLFLQHNQIMELppQAFVGLVNLQTLDLSNNRLiflpplslpklltlnlesSGVESVSQsIVHTLPQLRDLLLEDNPI 460
Cdd:cd21340 124 VLNISGNNIDSL--EPLAPLRNLEQLDASNNQI------------------SDLEELLD-LLSSWPSLRELDLTGNPV 180
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
194-460 |
5.01e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.48 E-value: 5.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 194 QLKNLNLAHNELLNISRESFYNLlelQTLVLSHNNISDIDyETflaLPN-LQYLDLSHNRLsgsairalqgipdlvslsi 272
Cdd:PRK15370 200 QITTLILDNNELKSLPENLQGNI---KTLYANSNQLTSIP-AT---LPDtIQEMELSINRI------------------- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 273 aynpdvgVAMQEFVASwSLKELDASGTGLCQVPAALAQSVRTLKLSDNWLKAincgdmdsypLLQYLDLSHSRIaQVEDD 352
Cdd:PRK15370 254 -------TELPERLPS-ALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRT----------LPAHLPSGITHL-NVQSN 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 353 ALGRLEL-----LESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIM----ELPPqafvglvNLQTLDLSNNRLIFLPPLSL 423
Cdd:PRK15370 315 SLTALPEtlppgLKTLEAGENALTSLPASLPPELQVLDVSKNQITvlpeTLPP-------TITTLDVSRNALTNLPENLP 387
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 665393974 424 PKLLTLNLESSGVESVSQSIVHTL---PQLRDLLLEDNPI 460
Cdd:PRK15370 388 AALQIMQASRNNLVRLPESLPHFRgegPQPTRIIVEYNPF 427
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
123-254 |
9.75e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 57.10 E-value: 9.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 123 ITAMDLSSNQLESLS-LDNFNQLRQLDLGNNSLEVIP----------LSLADTNMSLPfVTLDLSCNKFSQISTSffaqr 191
Cdd:cd21340 48 LTHLYLQNNQIEKIEnLENLVNLKKLYLGGNRISVVEglenltnleeLHIENQRLPPG-EKLTFDPRSLAALSNS----- 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 665393974 192 lpqLKNLNLAHNELLNIsrESFYNLLELQTLVLSHNNISDIDY--ETFLALPNLQYLDLSHNRLS 254
Cdd:cd21340 122 ---LRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVC 181
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
128-305 |
1.11e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 56.72 E-value: 1.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 128 LSSNQLESLS-LDNFNQLRQLDLGNNSLEVIPlsladtnmslpfvtlDLSCnkfsqistsffaqrLPQLKNLNLAHNEll 206
Cdd:cd21340 31 LYDNKITKIEnLEFLTNLTHLYLQNNQIEKIE---------------NLEN--------------LVNLKKLYLGGNR-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 207 nISR-ESFYNLLELQTLVLSHNNISD-----IDYETFLAL-PNLQYLDLSHNRLsgSAIRALQGIPDLVSLSIAYNP-DV 278
Cdd:cd21340 80 -ISVvEGLENLTNLEELHIENQRLPPgekltFDPRSLAALsNSLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQiSD 156
|
170 180
....*....|....*....|....*...
gi 665393974 279 GVAMQEFVASW-SLKELDASGTGLCQVP 305
Cdd:cd21340 157 LEELLDLLSSWpSLRELDLTGNPVCKKP 184
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
142-364 |
7.55e-08 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 56.34 E-value: 7.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 142 NQLRQLDLGNNSLEVIPL-SLADTNMSLPFV-TLDLSCNKFSQISTSFFAQRL---PQLKNLNLAHNellNISRESFYNL 216
Cdd:COG5238 180 NSVETVYLGCNQIGDEGIeELAEALTQNTTVtTLWLKRNPIGDEGAEILAEALkgnKSLTTLDLSNN---QIGDEGVIAL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 217 LE-------LQTLVLSHNNISDidyETFLAL-------PNLQYLDLSHNRLSGSAIRA----LQGIPDLVSLSIAYNpDV 278
Cdd:COG5238 257 AEalknnttVETLYLSGNQIGA---EGAIALakalqgnTTLTSLDLSVNRIGDEGAIAlaegLQGNKTLHTLNLAYN-GI 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 279 GVAMQEFVASwSLKEL--------------DASGTGLCQVPaALAQSVRTLKLSDNWL---KAINCGDMDSYPLLQYLDL 341
Cdd:COG5238 333 GAQGAIALAK-ALQENttlhsldlsdnqigDEGAIALAKYL-EGNTTLRELNLGKNNIgkqGAEALIDALQTNRLHTLIL 410
|
250 260
....*....|....*....|....
gi 665393974 342 SHSRIAQVEDDALGR-LELLESLF 364
Cdd:COG5238 411 DGNLIGAEAQQRLEQlLERIKSVY 434
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
193-374 |
1.76e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 53.25 E-value: 1.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 193 PQLKNLNLAHNELLNIsrESFYNLLELQTLVLSHNNISDIdyETFLALPNLQYLDLSHNRLsgSAIRALQGIPDLVSLSI 272
Cdd:cd21340 24 KNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNRI--SVVEGLENLTNLEELHI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 273 AYnpdvgvamQEfvaswslkelDASGTGLCQVP---AALAQSVRTLKLSDNwlkaiNCGDMDS-YPL--LQYLDLSHSRI 346
Cdd:cd21340 98 EN--------QR----------LPPGEKLTFDPrslAALSNSLRVLNISGN-----NIDSLEPlAPLrnLEQLDASNNQI 154
|
170 180 190
....*....|....*....|....*....|
gi 665393974 347 AQVED--DALGRLELLESLFLDRNLLMRVP 374
Cdd:cd21340 155 SDLEEllDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
379-460 |
4.05e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.90 E-value: 4.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 379 PSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLiflpplslpklltlnlessgvESVS-QSIVHtLPQLRDLLLED 457
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL---------------------TTLSpGAFSG-LPSLRYLDLSG 58
|
...
gi 665393974 458 NPI 460
Cdd:pfam13855 59 NRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
170-443 |
1.03e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.89 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 170 FVTLDLSCNKFSQISTSFFAQRL---PQLKNLNLAHNELLNISR------ESFYNLLELQTLVLSHNNISDID---YETF 237
Cdd:cd00116 25 LQVLRLEGNTLGEEAAKALASALrpqPSLKELCLSLNETGRIPRglqsllQGLTKGCGLQELDLSDNALGPDGcgvLESL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 238 LALPNLQYLDLSHNRLSGSAIRALQ-GIPDLVSlsiaynpdvgvamqefvaswSLKELDASGTGL---CQVPAALA---- 309
Cdd:cd00116 105 LRSSSLQELKLNNNGLGDRGLRLLAkGLKDLPP--------------------ALEKLVLGRNRLegaSCEALAKAlran 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 310 QSVRTLKLSDNwlkAIN-------CGDMDSYPLLQYLDLSHSRIAQVEDDALGrlELLESLfldrnllmrvpsslpPSLE 382
Cdd:cd00116 165 RDLKELNLANN---GIGdagiralAEGLKANCNLEVLDLNNNGLTDEGASALA--ETLASL---------------KSLE 224
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 665393974 383 HLFLQHNQIMELPPQAFV-----GLVNLQTLDLSNNrliflpplslpklltlNLESSGVESVSQSI 443
Cdd:cd00116 225 VLNLGDNNLTDAGAAALAsallsPNISLLTLSLSCN----------------DITDDGAKDLAEVL 274
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
240-470 |
1.19e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.51 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 240 LPNLQYLDLSHNRLSGSAIRA----LQGIPDLVSLSIAYN------PDVGVAMQEFVASWSLKELDASGTGLCQVPAALA 309
Cdd:cd00116 22 LLCLQVLRLEGNTLGEEAAKAlasaLRPQPSLKELCLSLNetgripRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 310 QSVRT------LKLSDNWL-----KAINCGDMDSYPLLQYLDLSHSRI--AQVED--DALGRLELLESLFLDRN-----L 369
Cdd:cd00116 102 ESLLRssslqeLKLNNNGLgdrglRLLAKGLKDLPPALEKLVLGRNRLegASCEAlaKALRANRDLKELNLANNgigdaG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 370 LMRVPSSLP--PSLEHLFLQHNQIMELPPQAFVGLV----NLQTLDLSNNrliflpplslpklltlNLESSGVESVSQSI 443
Cdd:cd00116 182 IRALAEGLKanCNLEVLDLNNNGLTDEGASALAETLaslkSLEVLNLGDN----------------NLTDAGAAALASAL 245
|
250 260
....*....|....*....|....*..
gi 665393974 444 VHTLPQLRDLLLEDNPIKCSDLLGIAE 470
Cdd:cd00116 246 LSPNISLLTLSLSCNDITDDGAKDLAE 272
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
379-416 |
1.82e-05 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 43.00 E-value: 1.82e-05
10 20 30
....*....|....*....|....*....|....*...
gi 665393974 379 PSLEHLFLQHNQIMELPPqaFVGLVNLQTLDLSNNRLI 416
Cdd:pfam12799 1 PNLEVLDLSNNQITDIPP--LAKLPNLETLDLSGNNKI 36
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
219-253 |
3.52e-05 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 41.85 E-value: 3.52e-05
10 20 30
....*....|....*....|....*....|....*
gi 665393974 219 LQTLVLSHNNISDIDyeTFLALPNLQYLDLSHNRL 253
Cdd:pfam12799 3 LEVLDLSNNQITDIP--PLAKLPNLETLDLSGNNK 35
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
300-415 |
8.51e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 46.61 E-value: 8.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 300 GLCQVPAALAQSVRTLKLSDNWLKaincgdmdSYPllqylDLSHSRIaqveddalgrlellESLFLDRNLLMRVPSSLPP 379
Cdd:PRK15370 189 GLTTIPACIPEQITTLILDNNELK--------SLP-----ENLQGNI--------------KTLYANSNQLTSIPATLPD 241
|
90 100 110
....*....|....*....|....*....|....*....
gi 665393974 380 SLEHLFLQHNQIMELP---PQAfvglvnLQTLDLSNNRL 415
Cdd:PRK15370 242 TIQEMELSINRITELPerlPSA------LQSLDLFHNKI 274
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
315-415 |
1.82e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.01 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 315 LKLSDNWLKAIncGDMDSYPLLQYLDLshsriaqvEDDALGRLELLESLfldrnllmrvpsslpPSLEHLFLQHNQIMEL 394
Cdd:cd21340 7 LYLNDKNITKI--DNLSLCKNLKVLYL--------YDNKITKIENLEFL---------------TNLTHLYLQNNQIEKI 61
|
90 100
....*....|....*....|.
gi 665393974 395 PPqaFVGLVNLQTLDLSNNRL 415
Cdd:cd21340 62 EN--LENLVNLKKLYLGGNRI 80
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
191-265 |
4.44e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 44.42 E-value: 4.44e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 665393974 191 RLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIP 265
Cdd:PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
|
|
| LRR_9 |
pfam14580 |
Leucine-rich repeat; |
173-276 |
1.52e-03 |
|
Leucine-rich repeat;
Pssm-ID: 405295 [Multi-domain] Cd Length: 175 Bit Score: 40.90 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665393974 173 LDLSCNKFSQISTsfFAQRLPQLKNLNLAHNELLNIsrESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNR 252
Cdd:pfam14580 24 LDLRGYKIPIIEN--LGATLDQFDTIDFSDNEIRKL--DGFPLLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNN 99
|
90 100
....*....|....*....|....*
gi 665393974 253 L-SGSAIRALQGIPDLVSLSIAYNP 276
Cdd:pfam14580 100 LqELGDLDPLASLKKLTFLSLLRNP 124
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
193-233 |
3.07e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.45 E-value: 3.07e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 665393974 193 PQLKNLNLAHNELLNIsrESFYNLLELQTLVLSHNN-ISDID 233
Cdd:pfam12799 1 PNLEVLDLSNNQITDI--PPLAKLPNLETLDLSGNNkITDLS 40
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
241-276 |
7.23e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 35.68 E-value: 7.23e-03
10 20 30
....*....|....*....|....*....|....*.
gi 665393974 241 PNLQYLDLSHNRLSGsaIRALQGIPDLVSLSIAYNP 276
Cdd:pfam12799 1 PNLEVLDLSNNQITD--IPPLAKLPNLETLDLSGNN 34
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
379-399 |
8.71e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 34.63 E-value: 8.71e-03
|
| LRR_TYP |
smart00369 |
Leucine-rich repeats, typical (most populated) subfamily; |
379-399 |
8.71e-03 |
|
Leucine-rich repeats, typical (most populated) subfamily;
Pssm-ID: 197687 [Multi-domain] Cd Length: 24 Bit Score: 34.63 E-value: 8.71e-03
|
|