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Conserved domains on  [gi|1344168995|ref|NP_001347760|]
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prothymosin alpha isoform 3 [Mus musculus]

Protein Classification

prothymosin alpha( domain architecture ID 10505379)

prothymosin alpha may mediate immune function by conferring resistance to certain opportunistic infections

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Prothymosin pfam03247
Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small ...
 2-47 3.25e-04

Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small acidic nuclear proteins that are thought to be involved in cell cycle progression, proliferation, and cell differentiation.


:

Pssm-ID: 460859 [Multi-domain]  Cd Length: 109  Bit Score: 36.42  E-value: 3.25e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1344168995   2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQ 47
Cdd:pfam03247   1 SDTAVDTASELSTKDLKEKKEVVEEAEKGKDAPANGNAENEENGAQ 46
 
Name Accession Description Interval E-value
Prothymosin pfam03247
Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small ...
 2-47 3.25e-04

Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small acidic nuclear proteins that are thought to be involved in cell cycle progression, proliferation, and cell differentiation.


Pssm-ID: 460859 [Multi-domain]  Cd Length: 109  Bit Score: 36.42  E-value: 3.25e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1344168995   2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQ 47
Cdd:pfam03247   1 SDTAVDTASELSTKDLKEKKEVVEEAEKGKDAPANGNAENEENGAQ 46
 
Name Accession Description Interval E-value
Prothymosin pfam03247
Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small ...
 2-47 3.25e-04

Prothymosin/parathymosin family; Prothymosin alpha and parathymosin are two ubiquitous small acidic nuclear proteins that are thought to be involved in cell cycle progression, proliferation, and cell differentiation.


Pssm-ID: 460859 [Multi-domain]  Cd Length: 109  Bit Score: 36.42  E-value: 3.25e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1344168995   2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQ 47
Cdd:pfam03247   1 SDTAVDTASELSTKDLKEKKEVVEEAEKGKDAPANGNAENEENGAQ 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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