|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
122-357 |
7.63e-36 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 135.55 E-value: 7.63e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 122 RQRIDNNVEQQREYSEMMAALQNKVHEYRKHIAELEGRMVGarnrmlddptsnvmifDNYDPGNTYITNHNVELWSPARG 201
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLE----------------KTSELEKTELLLRKLTLEPRLQR 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 202 KREtilggggapglttvnvhagagysgsgvagygggvqamvgDPNANYE-MIARLDEERRRSDE-------YRMQWENER 273
Cdd:pfam15035 65 LER---------------------------------------EHSADLEeALIRLEEERQRSESlsqvnslLREQLEQAS 105
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 274 QKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQKAE 353
Cdd:pfam15035 106 RANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWREVVAVRRQFTELKTATERDLSELKTE 185
|
....
gi 1767287514 354 FTRA 357
Cdd:pfam15035 186 FSRT 189
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
594-1522 |
1.47e-33 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 142.50 E-value: 1.47e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 594 EAERNSRRTDDKLR-----ASEAER------VAAEKARKFLE--DELAKLQASfqkSSTDDARKLRDEMDEhTNSIQEEF 660
Cdd:TIGR02168 176 ETERKLERTRENLDrlediLNELERqlksleRQAEKAERYKElkAELRELELA---LLVLRLEELREELEE-LQEELKEA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 661 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYsddirrnIQKDLDDLREKYDRVHTD 740
Cdd:TIGR02168 252 EEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQI-------LRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 741 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD 820
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 821 YESQINLLRRHNDELDTTIKGHQGKIThlENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLEN 900
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 901 ELEKLRNENKELVGKEARARDaaNQQLSRANLLNKE-LEDTKQDLKHSTDVNKQLEQDIR-DLKERLANIgkggrISRDS 978
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEG--FSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIEaALGGRLQAV-----VVENL 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 979 TTGTDGGAFgdrssvadpsRTRGAAGSTVFVPAaediESRGGGEIDiPSSGDVIHGRDGRDGRDAgnrgthTITNTKERI 1058
Cdd:TIGR02168 556 NAAKKAIAF----------LKQNELGRVTFLPL----DSIKGTEIQ-GNDREILKNIEGFLGVAK------DLVKFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1059 ERIEKNILDRYhddeLVEHKIREVNDRWKRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---K 1131
Cdd:TIGR02168 615 RKALSYLLGGV----LVVDDLDNALELAKKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieE 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1132 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1211
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKA-LAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1212 GQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1291
Cdd:TIGR02168 761 AEIEELEER----LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1292 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1371
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1372 LKELKNSLSHAKTEKERLQNafrektkqadhlnqlasQFDTKLTKLRNELQDTNDklitsdternalrnELQKLSQELKF 1451
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEV-----------------RIDNLQERLSEEYSLTLE--------------EAEALENKIED 965
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1452 GNEQIQRKSDEYQTTIDDLAhshRVSedsrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1522
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELG---PVN----LAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1166-2064 |
1.98e-28 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 125.55 E-value: 1.98e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1166 ENLKSVED---DLRDKLNNLEKQlADSLNRENELEREKRDYDekINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytV 1242
Cdd:TIGR02168 186 ENLDRLEDilnELERQLKSLERQ-AEKAERYKELKAELRELE--LALLVLRLEELREELEELQEELKEAEEELEE----L 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1243 RSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR------- 1315
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKldelaee 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1316 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQnafRE 1395
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE---DR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1396 KTKQADHLNQLASQFDtkltklRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHShr 1475
Cdd:TIGR02168 416 RERLQQEIEELLKKLE------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL-- 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1476 vseDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQ---DYIKADSE---------RDILSDALRRFQSSANRVINF 1543
Cdd:TIGR02168 488 ---QARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGvlsELISVDEGyeaaieaalGGRLQAVVVENLNAAKKAIAF 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1544 HTFVDGGAGYV---DGVPGGTSVIGGGPSAQRS-GAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSD-VAYPRS 1618
Cdd:TIGR02168 565 LKQNELGRVTFlplDSIKGTEIQGNDREILKNIeGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELaKKLRPG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1619 VPFPpSADFSSGRPGAASAGGRvinnlDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETH 1698
Cdd:TIGR02168 645 YRIV-TLDGDLVRPGGVITGGS-----AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1699 TTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQL 1778
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1779 KNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDM 1858
Cdd:TIGR02168 799 KALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1859 KDDTDKLRRDLTKAESVENELRKTIDiqsKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRdykqrvhdv 1938
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELR---ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS--------- 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1939 nnrvSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNssql 2018
Cdd:TIGR02168 947 ----EEYSLTLEEAEALENKIEDDEEEARRRL-------KRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKED---- 1011
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1767287514 2019 sdgwkkekitLLKKIELLENEKRRTDAAIRETALQR-EAIEKSLNAM 2064
Cdd:TIGR02168 1012 ----------LTEAKETLEEAIEEIDREARERFKDTfDQVNENFQRV 1048
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1103-2043 |
8.10e-25 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 113.62 E-value: 8.10e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1103 RIRELEDELSQIGRG----NDKTENDITELKRKHAAEIDKLKSDIS--ALHDKHLSDLDDEKEQYGKAVENLKSVEDDLR 1176
Cdd:TIGR02169 118 RLSEIHDFLAAAGIYpegyNVVLQGDVTDFISMSPVERRKIIDEIAgvAEFDRKKEKALEELEEVEENIERLDLIIDEKR 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1177 DKLNNLEKQLADSLnRENELEREKRDYDEKINSlygqnqkikdewddfrndadKEIQKWKTDAYTVRSEAKALETTNTAL 1256
Cdd:TIGR02169 198 QQLERLRREREKAE-RYQALLKEKREYEGYELL--------------------KEKEALERQKEAIERQLASLEEELEKL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1257 KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--------QVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1328
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1329 DANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAS 1408
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1409 QFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsedsrlnalQEL 1488
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL----EQLAADLSKYE---------------------QEL 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1489 EARKYEINDLtsrldstEQRLATLQQDYIKADSERDILSDALRRFqSSANRVINfhtfvdggagyvDGVPG--GTSVIGG 1566
Cdd:TIGR02169 472 YDLKEEYDRV-------EKELSKLQRELAEAEAQARASEERVRGG-RAVEEVLK------------ASIQGvhGTVAQLG 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1567 GPSAQRSGAYDPSSGGVIG----SGISGGPGGSDFGREIEIGRGD--------SDQSDVAYPRS----------VPFPPS 1624
Cdd:TIGR02169 532 SVGERYATAIEVAAGNRLNnvvvEDDAVAKEAIELLKRRKAGRATflplnkmrDERRDLSILSEdgvigfavdlVEFDPK 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1625 ---------------ADFSSGRPgaaSAGGRVINNLDG---TTTVNMNGGFDI--------ANLEGTLQSLLNKIEKLEM 1678
Cdd:TIGR02169 612 yepafkyvfgdtlvvEDIEAARR---LMGKYRMVTLEGelfEKSGAMTGGSRAprggilfsRSEPAELQRLRERLEGLKR 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1679 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdEERRQMKSKmV 1758
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEI----ENVKSELKE-L 763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1759 AAELQArgKEAQLRHLNEQLKNLRTDLdnAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILT 1838
Cdd:TIGR02169 764 EARIEE--LEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQ 839
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1839 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLE 1918
Cdd:TIGR02169 840 EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES----------RLGDLKKERDELEAQLRELERKIEELE 909
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1919 NELLNVRSEVRDYKQRVHDVNNRVSELQrqlqDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQqLETAKNekrVATKEL 1998
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIE----DPKGEDEEIPEEELSLEDVQAELQRVEEEIRA-LEPVNM---LAIQEY 981
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*
gi 1767287514 1999 EDLKRRLAQLENERrnssqlsDGWKKEKITLLKKIELLENEKRRT 2043
Cdd:TIGR02169 982 EEVLKRLDELKEKR-------AKLEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
575-1355 |
9.84e-24 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 110.16 E-value: 9.84e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 575 DKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKLRDEMDEHTN 654
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQA-LLKEKREYEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 655 SIQEE---FKTRIDELNRRVENLLRENNRLKSEVNPLKdkyrdlENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLR 731
Cdd:TIGR02169 248 SLEEElekLTEEISELEKRLEEIEQLLEELNKKIKDLG------EEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 732 EKYDRVHTDNEKILGELEHAQKAahLAEQQLKEIKIQrDDYQKQKDEharhlfdiRHKLETEIkgrQDLEKNGARNNDEL 811
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELERE--IEEERKRRDKLT-EEYAELKEE--------LEDLRAEL---EEVDKEFAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 812 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKE-------KQDILNQKLKL 884
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEikkqewkLEQLAADLSKY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 885 DGDVQALKETIRKLENELEKLRnenKELVGKEARARDAANQQLSRA---NLLNKELEDT--------KQDLKHSTDV--- 950
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQ---RELAEAEAQARASEERVRGGRaveEVLKASIQGVhgtvaqlgSVGERYATAIeva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 951 ------NKQLEQD------IRDLKERLAN------IGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAA-----GSTV 1007
Cdd:TIGR02169 545 agnrlnNVVVEDDavakeaIELLKRRKAGratflpLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAfkyvfGDTL 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1008 FVpaaEDIES--RGGGEI-------DIPSSGDVIHGrdgrdGRDAGNRGTHTITNTKERIERieknildryhddelVEHK 1078
Cdd:TIGR02169 625 VV---EDIEAarRLMGKYrmvtlegELFEKSGAMTG-----GSRAPRGGILFSRSEPAELQR--------------LRER 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1079 IREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAA---EIDKLKSDISALHDKhLSDLD 1155
Cdd:TIGR02169 683 LEGL----KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKlkeRLEELEEDLSSLEQE-IENVK 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1156 DEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSlnRENELEREKRDYDEKINslygqnqkikdEWDDFRNDADKEIQKW 1235
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVS-----------RIEARLREIEQKLNRL 824
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1236 KTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR 1315
Cdd:TIGR02169 825 TLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERK 904
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1767287514 1316 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1355
Cdd:TIGR02169 905 IEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1087-1971 |
1.54e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 109.76 E-value: 1.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1087 KRELE-RLENEKDDLERrireLEDELSQIGRGNDKTEnditeLKRKHAAEIDKLKSDISALHdkhLSDLDDEKEQYGKAV 1165
Cdd:TIGR02168 174 RKETErKLERTRENLDR----LEDILNELERQLKSLE-----RQAEKAERYKELKAELRELE---LALLVLRLEELREEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1166 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINS----LYGQNQKIKD------EWDDFRNDADKEIQKW 1235
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEElqkeLYALANEISRleqqkqILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1236 KTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR 1315
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1316 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMEtdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1395
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDA 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1396 KTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNeqiqrksdEYQTTID-DLAhsh 1474
Cdd:TIGR02168 480 AERE---LAQLQARLDS-LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDE--------GYEAAIEaALG--- 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1475 rvsedSRLNAL--QELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFVDGGag 1552
Cdd:TIGR02168 545 -----GRLQAVvvENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA-- 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1553 yVDGVPGGTSVIGGGPSAQR-SGAYDPSsggvigsgisggpggsdfgreieiGRGDSDQSDVAYPRSVPFPPSADFSSGR 1631
Cdd:TIGR02168 618 -LSYLLGGVLVVDDLDNALElAKKLRPG------------------------YRIVTLDGDLVRPGGVITGGSAKTNSSI 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1632 PGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNI 1711
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL 752
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1712 EDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD 1791
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR 832
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1792 I----RSLRDKEEQWD----------SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1857
Cdd:TIGR02168 833 IaateRRLEDLEEQIEelsedieslaAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1858 MKDDTDKLRRDLTKAESVENELRKTID-IQSKTSHEYQLLKDQLLNTQN----ELNGANNRKQQLENEL-------LNVR 1925
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDnLQERLSEEYSLTLEEAEALENkiedDEEEARRRLKRLENKIkelgpvnLAAI 992
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1926 SEVRDYKQRVHDVNNRVSELQR---QLQDANTEKNR-VEDRFLSVEKVVN 1971
Cdd:TIGR02168 993 EEYEELKERYDFLTAQKEDLTEakeTLEEAIEEIDReARERFKDTFDQVN 1042
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
453-1450 |
2.06e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 109.38 E-value: 2.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 453 ERNIELESRGDDSQRKIAELE---AELRRNREKLNEAQGALKKLHEMaQDSEKNVDGTVSIKRTRSLSpgktplppsEAL 529
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRLEdilNELERQLKSLERQAEKAERYKEL-KAELRELELALLVLRLEELR---------EEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 530 RAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAS 609
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 610 EAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEhTNSIQEEFKTRIDELNRRVENllrennrlksevnpLK 689
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELES-LEAELEE-LEAELEELESRLEELEEQLET--------------LR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 690 DKYRDLENEYNSTQRRIEEKETQirysddirrniqkdLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQR 769
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEAR--------------LERLEDRRERLQQEIEELLKKLEEAELKEL--QAELEELEEEL 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 770 DDYQKQKDEHARHLFDIRhkleteikgrqdlekngarnnDELDKLRQtisdyesqinllrrhndeldttikghqgKITHL 849
Cdd:TIGR02168 450 EELQEELERLEEALEELR---------------------EELEEAEQ----------------------------ALDAA 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 850 ENELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDGDVQALKETIrKLENELEKlrnenkelvGKEARARDAANqq 926
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVkalLKNQSGLSGILGVLSELI-SVDEGYEA---------AIEAALGGRLQ-- 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 927 lsraNLLNKELEDTKQDLKHstdvnkqleqdirdLKErlANIGKGGRISRDSTTGTDggafgdrssvADPSRTRGAAGST 1006
Cdd:TIGR02168 549 ----AVVVENLNAAKKAIAF--------------LKQ--NELGRVTFLPLDSIKGTE----------IQGNDREILKNIE 598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1007 VFVPAAEDIESrgggeidipssgdvihgrdgrdgrdagnrgthtitnTKERIERIEKNILDRYhddeLVEHKIREVNDRW 1086
Cdd:TIGR02168 599 GFLGVAKDLVK------------------------------------FDPKLRKALSYLLGGV----LVVDDLDNALELA 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1087 KRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---KHAAEIDKLKSDISALHDKhLSDLDDEKE 1159
Cdd:TIGR02168 639 KKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieELEEKIEELEEKIAELEKA-LAELRKELE 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1160 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDA 1239
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER----LEEAEEELAEAEAEI 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1240 YTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSL 1319
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1320 EDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNafrektkq 1399
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV-------- 936
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1400 adhlnqlasQFDTKLTKLRNELQDTNDKLITS----DTERNALRNELQKLSQELK 1450
Cdd:TIGR02168 937 ---------RIDNLQERLSEEYSLTLEEAEALenkiEDDEEEARRRLKRLENKIK 982
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
643-1465 |
6.38e-22 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 104.38 E-value: 6.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 643 RKLRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRlKSEVNPLKDKYRDLE-----NEYNSTQRRIEEKETQI---- 713
Cdd:TIGR02169 173 EKALEELEEVEENI-ERLDLIIDEKRQQLERLRREREK-AERYQALLKEKREYEgyellKEKEALERQKEAIERQLasle 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 714 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKI--LGELEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDEHARHLFDI 786
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELNKKIkdLGEEEQLRVKEKIGELEAEIASLERsiaekERELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 787 RHKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDL 866
Cdd:TIGR02169 331 IDKLLAEI---EELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 867 NQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRAnllNKELEDTKQDLKH 946
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLA----ADLSKY---EQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 947 STDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTR-----------GAAGSTVFVP----A 1011
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGeryataievaaGNRLNNVVVEddavA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1012 AEDIE----SRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKER---------------IERIE--KNILDRYH 1070
Cdd:TIGR02169 561 KEAIEllkrRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPkyepafkyvfgdtlvVEDIEaaRRLMGKYR 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1071 ----DDELVE---------HKIREVNDRWKRELERLEnekdDLERRIRELEDELSQIGRGNDKTENDITELKRKhaaeID 1137
Cdd:TIGR02169 641 mvtlEGELFEksgamtggsRAPRGGILFSRSEPAELQ----RLRERLEGLKRELSSLQSELRRIENRLDELSQE----LS 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1138 KLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYgqnqki 1217
Cdd:TIGR02169 713 DASRKIGEI-EKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLE------ 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1218 kdewddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD 1297
Cdd:TIGR02169 786 -------ARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1298 TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDankwRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDALKELKN 1377
Cdd:TIGR02169 859 LNGKKEELEEELEELEAALRDLESRLGDLKKE----RDELEAQLRE---LERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1378 SLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRnELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQ 1457
Cdd:TIGR02169 932 ELSEIEDPKGEDE----EIPEEELSLEDVQAELQRVEEEIR-ALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
....*...
gi 1767287514 1458 RKSDEYQT 1465
Cdd:TIGR02169 1007 ERIEEYEK 1014
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
537-1327 |
5.55e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 97.83 E-value: 5.55e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 537 RNKDNDIQQLERKLKiaESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAseaervAA 616
Cdd:TIGR02169 207 REKAERYQALLKEKR--EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEE------LN 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 617 EKARKFLEDELAKLQA-----SFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 691
Cdd:TIGR02169 279 KKIKDLGEEEQLRVKEkigelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 692 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 771
Cdd:TIGR02169 359 YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 772 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN 851
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKA 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 852 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLK---LDGDVQAlKETIRKLENE---------LEKLRNENKEL-VGKEAR 918
Cdd:TIGR02169 519 SIQGVHGTVAQLGSVGERYATAIEVAAGNRLNnvvVEDDAVA-KEAIELLKRRkagratflpLNKMRDERRDLsILSEDG 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 919 ARD-------------AANQQLSRANLLNKELEDTKQDLKHSTDVNkqLEQDIRDlkerlanigKGGRISrdsttgtdGG 985
Cdd:TIGR02169 598 VIGfavdlvefdpkyePAFKYVFGDTLVVEDIEAARRLMGKYRMVT--LEGELFE---------KSGAMT--------GG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 986 AFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRGGGEIDIPSSGDVIHGR--DGRDGRDAGNRGTHTITNTKERIERIEK 1063
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRL-----RERLEGLKRELSSLQSELRRIENRldELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1064 NILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTE-NDITELKRKHAAEIDKLKSD 1142
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1143 ISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1222
Cdd:TIGR02169 814 LREI-EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1223 DFRND---ADKEIQKWKTDAYTVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKV------RDLTSQVRHLED 1293
Cdd:TIGR02169 893 ELEAQlreLERKIEELEAQIEKKRKRLS-------ELKAKLEALEEELSEIEDPKGEDEEIPeeelslEDVQAELQRVEE 965
|
810 820 830
....*....|....*....|....*....|....
gi 1767287514 1294 ELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ 1327
Cdd:TIGR02169 966 EIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLE 999
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
537-964 |
1.80e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.81 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 537 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAA 616
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 617 EKARKFLEDELAKLQAsfQKSSTDDAR-KLRDEMDEHTNSIQEEfKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 695
Cdd:TIGR02168 746 EERIAQLSKELTELEA--EIEELEERLeEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 696 ENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLddlrekydrvhtdnEKILGELEHAQkaahlaeQQLKEIKIQRDDYQKQ 775
Cdd:TIGR02168 823 RERLESLERRIAATERRLEDLEEQIEELSEDI--------------ESLAAEIEELE-------ELIEELESELEALLNE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 776 KDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhndeldttikghQGKITHLenelhs 855
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL--------------EVRIDNL------ 941
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 856 rsgeIEKLNDLNQRLQkekQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKElvgkearARDAANQQLSRANLLNK 935
Cdd:TIGR02168 942 ----QERLSEEYSLTL---EEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLA-------AIEEYEELKERYDFLTA 1007
|
410 420
....*....|....*....|....*....
gi 1767287514 936 ELEDTKQDLkhstdvnKQLEQDIRDLKER 964
Cdd:TIGR02168 1008 QKEDLTEAK-------ETLEEAIEEIDRE 1029
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
439-915 |
1.01e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 90.08 E-value: 1.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 439 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtrslsp 518
Cdd:TIGR04523 211 QKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQN----------- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 519 gktplppsealravRNTFRNKDNDIQQLERKLKIAESQVKEFLNK-----FENADEARRRLDKQFA-------DAKREIS 586
Cdd:TIGR04523 280 --------------NKKIKELEKQLNQLKSEISDLNNQKEQDWNKelkseLKNQEKKLEEIQNQISqnnkiisQLNEQIS 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 587 NLQKSVD--EAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFktri 664
Cdd:TIGR04523 346 QLKKELTnsESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK---- 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 665 DELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 744
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 745 LGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgrqDLEKNGARNNDELDKLRQTISDYESQ 824
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD-----DFELKKENLEKEIDEKNKEIEELKQT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 825 INLLRRHNDELDTTIKGHQGKITHLENELHSR-------SGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRK 897
Cdd:TIGR04523 577 QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKekkisslEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
490
....*....|....*...
gi 1767287514 898 LENELEKLRNENKELVGK 915
Cdd:TIGR04523 657 IRNKWPEIIKKIKESKTK 674
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
668-1431 |
4.03e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 88.15 E-value: 4.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 668 NRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 747
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 748 LEHAQKAAHLAEQQLKEIKiqrddyqKQKDEHARHLFDIRhkleTEIKgrqDLEKNGARNNDELDKLRQTISDYESQINL 827
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLE-------KQKKENKKNIDKFL----TEIK---KKEKELEKLNNKYNDLKKQKEELENELNL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 828 LRRHNDELDTTIKghqgKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRN 907
Cdd:TIGR04523 178 LEKEKLNIQKNID----KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 908 ENKELVGKEARARD---AANQQLSRANLLNKELEDTKQDLKHS-TDVNKQLEQDI-RDLKERLANIGKggrisrdsttgt 982
Cdd:TIGR04523 254 QLNQLKDEQNKIKKqlsEKQKELEQNNKKIKELEKQLNQLKSEiSDLNNQKEQDWnKELKSELKNQEK------------ 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 983 dggafgdrssvadpsrtrgaagstvfvpAAEDIESRgggeidipssgdvihgrdgrdgrdagnrgthtITNTKERIERIE 1062
Cdd:TIGR04523 322 ----------------------------KLEEIQNQ--------------------------------ISQNNKIISQLN 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1063 KNILDryhddelvehkirevndrWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKrkhaAEIDKLKSD 1142
Cdd:TIGR04523 342 EQISQ------------------LKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE----SQINDLESK 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1143 I------SALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK 1216
Cdd:TIGR04523 400 IqnqeklNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1217 IKDEWDDFRNDADKEIQKWKTdaytvrseakalettntaLKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1296
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKK------------------LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1297 DTKGNLVQKEMDLESTQnrlrsLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK 1376
Cdd:TIGR04523 542 DLEDELNKDDFELKKEN-----LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLE 616
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1377 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1431
Cdd:TIGR04523 617 KELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKES 671
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
529-966 |
4.66e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 87.77 E-value: 4.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 529 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS-------VDEAERNSRR 601
Cdd:TIGR04523 42 LKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDlskinseIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 602 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST--DDARKLRDEMDEHTNSIQEEF---KTRIDELN---RRVEN 673
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNkyNDLKKQKEELENELNLLEKEKlniQKNIDKIKnklLKLEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 674 LL-------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILG 746
Cdd:TIGR04523 202 LLsnlkkkiQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIS-------NTQTQLNQLKDEQNKIKKQLSEKQK 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 747 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQ----DLEKNGARNNDELDKLRQTISDYE 822
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKEQ------DWNKELKSELKNQEkkleEIQNQISQNNKIISQLNEQISQLK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL----NDLNQRLQKEKQdilnQKLKLDGDVQALKETIRKL 898
Cdd:TIGR04523 349 KELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLesqiNDLESKIQNQEK----LNQQKDEQIKKLQQEKELL 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 899 ENELEKLRNEN-------KELVGKEA----------RARDAANQQLSRANL-----------LNKELEDTKQDLKHSTDV 950
Cdd:TIGR04523 425 EKEIERLKETIiknnseiKDLTNQDSvkeliiknldNTRESLETQLKVLSRsinkikqnleqKQKELKSKEKELKKLNEE 504
|
490
....*....|....*.
gi 1767287514 951 NKQLEQDIRDLKERLA 966
Cdd:TIGR04523 505 KKELEEKVKDLTKKIS 520
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
720-1534 |
1.17e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 1.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 720 RRNIQKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRD---DYQKQKDEharhLFDIRHKLETeikg 796
Cdd:TIGR02168 174 RKETERKLERTRENLDRL----EDILNELE----------RQLKSLERQAEkaeRYKELKAE----LRELELALLV---- 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 797 rQDLEkngaRNNDELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 876
Cdd:TIGR02168 232 -LRLE----ELREELEELQEELKEAEEELE-------ELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 877 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 956
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 957 DIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVfvpaaEDIESRgggeidipssgdvihgRD 1036
Cdd:TIGR02168 380 QLETLRSKVAQL---------------------ELQIASLNNEIERLEARL-----ERLEDR----------------RE 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1037 GRDGRDAGNRGTHTITNTKERIERIEknildryhDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1116
Cdd:TIGR02168 418 RLQQEIEELLKKLEEAELKELQAELE--------ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1117 GNDKTENDITELKRKH--AAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-LKSVEDDLRDKLNNLEKQLADSLnRE 1193
Cdd:TIGR02168 490 RLDSLERLQENLEGFSegVKALLKNQSGLSGILGV-LSELISVDEGYEAAIEAaLGGRLQAVVVENLNAAKKAIAFL-KQ 567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1194 NELER-----EKRDYDEKINSLYGQNQK-------IKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALE--------TTN 1253
Cdd:TIGR02168 568 NELGRvtflpLDSIKGTEIQGNDREILKniegflgVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALElakklrpgYRI 647
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1254 TALKAQL-----------QAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ 1322
Cdd:TIGR02168 648 VTLDGDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQ 727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1323 HSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKElknslshAKTEKERLQnafrektKQADH 1402
Cdd:TIGR02168 728 ISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-------AEAEIEELE-------AQIEQ 793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1403 LNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEyqttIDDLAHSHRVSEDSRL 1482
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED----IESLAAEIEELEELIE 869
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1483 NALQELEArkyeindLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ 1534
Cdd:TIGR02168 870 ELESELEA-------LLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1075-1541 |
1.82e-16 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 85.84 E-value: 1.82e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1075 VEHKIREVNDRWKR---ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLkSDISALHDKH- 1150
Cdd:TIGR04523 136 NKKNIDKFLTEIKKkekELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLL-SNLKKKIQKNk 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1151 -----LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLadsLNRENELEREKRDYDEKINSLYGQNQKIKD------ 1219
Cdd:TIGR04523 215 slesqISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQL---NQLKDEQNKIKKQLSEKQKELEQNNKKIKElekqln 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1220 ---------------EWDDFRNDADKEIQKWKTDAYT------------------VRSEAKALETTNTALKAQLQAANDR 1266
Cdd:TIGR04523 292 qlkseisdlnnqkeqDWNKELKSELKNQEKKLEEIQNqisqnnkiisqlneqisqLKKELTNSESENSEKQRELEEKQNE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1267 IDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAalrendi 1346
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKD------- 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1347 LKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTK---LTKLRNELQD 1423
Cdd:TIGR04523 445 LTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKvkdLTKKISSLKE 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1424 TNDKLITSDTERNA----LRNELQKLSQELKFgnEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLT 1499
Cdd:TIGR04523 525 KIEKLESEKKEKESkisdLEDELNKDDFELKK--ENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLI 602
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1767287514 1500 SRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1541
Cdd:TIGR04523 603 KEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLK 644
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1658-2148 |
2.25e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.14 E-value: 2.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1737
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1738 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRtdldnahtdiRSLRDKEEQWDSSRFQLETKMRESD 1817
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE----------AELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1818 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLK 1897
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--VSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRT 1975
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1976 TETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssqlsdgwkkekITLLKKIELLENEKRrtDAAIRETALQRE 2055
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR-------------GAIGAAVDLVASDLR--EADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2056 AIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2135
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490
....*....|...
gi 1767287514 2136 LEDQIAILRDQLD 2148
Cdd:COG1196 702 EEEEERELAEAEE 714
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
443-1205 |
2.91e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.88 E-value: 2.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 443 ELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNvdgtvsIKRTRslspgktp 522
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQ------KQILR-------- 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 523 lppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRT 602
Cdd:TIGR02168 309 ----ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 603 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTdDARKLRDEMDEHTnsiQEEFKTRIDELNRRVENLLRENNRLK 682
Cdd:TIGR02168 385 RSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQ-EIEELLKKLEEAE---LKELQAELEELEEELEELQEELERLE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 683 SEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKY--------------DRVHTDN------E 742
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLknqsglsgilgvlsELISVDEgyeaaiE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 743 KILGELEHA-----QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQT 817
Cdd:TIGR02168 541 AALGGRLQAvvvenLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 818 I-------SDYESQINLLRRHN-----------------------DELDTTIKGHQGKITHLENELHSRSGEIEKLNDLN 867
Cdd:TIGR02168 621 LlggvlvvDDLDNALELAKKLRpgyrivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKAL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 868 QRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHS 947
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 948 TDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRgggeidips 1027
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR-----LEDLEEQ--------- 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1028 sgdvihgrdgrdgrdagnrgthtITNTKERIERIEKNILDryhddelvehkIREVNDRWKRELERLENEKDDLERRIREL 1107
Cdd:TIGR02168 847 -----------------------IEELSEDIESLAAEIEE-----------LEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1108 EDELSQIGRGNDKTENDITELKRKHAA----------EIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD 1177
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEElreklaqlelRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
810 820 830
....*....|....*....|....*....|..
gi 1767287514 1178 KLNNLEKQLAD----SLNRENELEREKRDYDE 1205
Cdd:TIGR02168 973 RLKRLENKIKElgpvNLAAIEEYEELKERYDF 1004
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
250-969 |
3.01e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.88 E-value: 3.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 250 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKDKE--KTFINRERN--------LAQYLSDEQ 319
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEqqKQILRERLAnlerqleeLEAQLEELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 320 RKMLDLWTELQRVRKQFSDLKTHTEEdLDKQKAEFTRAIRNVNNISR--NAAFSAGAGDglgLYGLEDGGDVNRTTNNYE 397
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELES-LEAELEELEAELEELESRLEelEEQLETLRSK---VAQLELQIASLNNEIERL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 398 KVFIETIKRMNGTGGAGSASSADLLEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRgddsqrkIAELEAELR 477
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE-------LEEAEQALD 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 478 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPpsealravrntfrnkdndiqqlerklkiaeSQV 557
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVL------------------------------SEL 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 558 KEFLNKFENADEA--RRRLD----KQFADAKREISNLQKSvdEAERN-----SRRTDDKLRASEAERVAAEKARKFLEDE 626
Cdd:TIGR02168 529 ISVDEGYEAAIEAalGGRLQavvvENLNAAKKAIAFLKQN--ELGRVtflplDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 627 LAKLQASFQK----------------SSTDDARKLRDEM-------------------DEHTNSIQEEFKTRIDELNRRV 671
Cdd:TIGR02168 607 LVKFDPKLRKalsyllggvlvvddldNALELAKKLRPGYrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 672 ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHA 751
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 752 QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgrqDLEKNGARNNDELDKLRQTISDYESQINLLRRH 831
Cdd:TIGR02168 767 EERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD-------ELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 832 NDELDTTIKGHQGKITHLEnelhsrsGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 911
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLA-------AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 912 LVGKEARARDAANQ--------QLSRANLLNK-------ELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 969
Cdd:TIGR02168 913 LRRELEELREKLAQlelrleglEVRIDNLQERlseeyslTLEEAEALENKIEDDEEEARRRLKRLENKIKELG 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
616-1202 |
3.35e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 3.35e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 616 AEKARKF--LEDELAKLQASfqksstddARKLRDEmdeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYR 693
Cdd:COG1196 209 AEKAERYreLKEELKELEAE--------LLLLKLR---ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 694 DLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQ 773
Cdd:COG1196 278 ELELELEEAQAEEYELLAELA-------RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 774 KQKDEHARHLFDIRHKLETEIKGRQDLEkngarnnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL 853
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAE-------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 854 HSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLL 933
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 934 NKELEDTKQDLKHS-----------------------------------TDVNKQLEQDIRDLKER---------LANIG 969
Cdd:COG1196 504 EGFLEGVKAALLLAglrglagavavligveaayeaaleaalaaalqnivVEDDEVAAAAIEYLKAAkagratflpLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 970 KGGRISRDSTTGTDGGAFGDRSS--VADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRG 1047
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASdlREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1048 THTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEN---D 1124
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEellE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1125 ITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGK----AVENLKSVE---DDLRDKLNNLEKQLADSLNRENELE 1197
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEEL-ERELERLEREIEALGPvnllAIEEYEELEeryDFLSEQREDLEEARETLEEAIEEID 822
|
....*
gi 1767287514 1198 REKRD 1202
Cdd:COG1196 823 RETRE 827
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1089-1532 |
4.32e-16 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 84.69 E-value: 4.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHdkhlSDLDDEKEQYGKAVENL 1168
Cdd:TIGR04523 55 ELKNLDKNLNKDEEKINNSNNKIKIL----EQQIKDLNDKLKKNKDKINKLNSDLSKIN----SEIKNDKEQKNKLEVEL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1169 KSVEDDLRDK----------LNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWkTD 1238
Cdd:TIGR04523 127 NKLEKQKKENkknidkflteIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLL-SN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1239 AYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS 1318
Cdd:TIGR04523 206 LKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1319 LEDQHSTLQSDANKWRGELDAALreNDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK 1398
Cdd:TIGR04523 286 LEKQLNQLKSEISDLNNQKEQDW--NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1399 QADHLNQlasqfdtKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQT---TIDDLAHSHR 1475
Cdd:TIGR04523 364 ELEEKQN-------EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELlekEIERLKETII 436
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1476 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRR 1532
Cdd:TIGR04523 437 KNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
438-970 |
2.73e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.29 E-value: 2.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 438 AELHKELMTKYEESIERNIELESRGDD---SQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtr 514
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL------- 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 515 slspgktplppSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 594
Cdd:COG1196 336 -----------EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 595 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEmdEHTNSIQEEFKTRIDELNRRVENL 674
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE--EALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 675 LRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEketqirysdDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQ-- 752
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKAALLL---------AGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvv 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 753 ---KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR----QDLEKNGARNNDELDKLRQTISDY---E 822
Cdd:COG1196 554 eddEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVdlvaSDLREADARYYVLGDTLLGRTLVAarlE 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 902
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 903 EKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 970
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
659-1293 |
3.00e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.29 E-value: 3.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 659 EFKTRIDElnRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVH 738
Cdd:COG1196 217 ELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 739 TDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 818
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 819 SDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklndlnqRLQKEKQDILNQKLKLDGDVQALKETIRKL 898
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE-------RLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 899 ENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGrisrDS 978
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG----LA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 979 TTGTDGGAFGDRSSVADPSRTrGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERI 1058
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAAL-AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVD 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1059 ERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndktenDITELKRKHAAEIDK 1138
Cdd:COG1196 603 LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGG-------SLTGGSRRELLAALL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1139 LKSDIsalhdkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK 1218
Cdd:COG1196 676 EAEAE-------LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1219 DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLtktvndhTSKVRDLTSQVRHLED 1293
Cdd:COG1196 749 EEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELEERYDFL-------SEQREDLEEARETLEE 816
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
468-970 |
6.28e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 80.83 E-value: 6.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 468 KIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsIKRTRSLSPGKTPLPPS-----EALRAVRNTFRNKD-- 540
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDL--KKQKEELENELNLLEKEklniqKNIDKIKNKLLKLEll 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 -NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKA 619
Cdd:TIGR04523 203 lSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 620 RKFLEDELAKLQASFQKsstddarkLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN----RLKSEVNPLKDKYRDL 695
Cdd:TIGR04523 283 IKELEKQLNQLKSEISD--------LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNkiisQLNEQISQLKKELTNS 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 696 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDdyqkq 775
Cdd:TIGR04523 355 ESENSEKQRELEEKQNEIE-------KLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKE----- 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 776 kdeharhlfdirhKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHS 855
Cdd:TIGR04523 423 -------------LLEKEI---ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 856 RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKearaRDAANQQLSRANL--- 932
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE----LNKDDFELKKENLeke 562
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1767287514 933 ---LNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 970
Cdd:TIGR04523 563 ideKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIK 603
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1163-1815 |
1.54e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 1.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1163 KAVENLKSVEDDL---RDKLNNLEKQLaDSLNRENELEREKRDYDEKINSLygQNQKIKDEWDDFRND---ADKEIQKWK 1236
Cdd:COG1196 176 EAERKLEATEENLerlEDILGELERQL-EPLERQAEKAERYRELKEELKEL--EAELLLLKLRELEAEleeLEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1237 TDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1316
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1317 RSLEDQhstlqsdankwrgeldaalrendilksnntnmetdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREK 1396
Cdd:COG1196 333 EELEEE-----------------------------------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1397 TKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKfgneqiqrksdEYQTTIDDLAHSHRV 1476
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA-----------ELEEEEEEEEEALEE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1477 SEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTfvdggagyVDG 1556
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL--------LAG 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1557 VPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAAS 1636
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1637 AG-GRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNL 1715
Cdd:COG1196 599 AAvDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1716 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSL 1795
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
650 660
....*....|....*....|
gi 1767287514 1796 RDKEEQWDSSRFQLETKMRE 1815
Cdd:COG1196 759 PPDLEELERELERLEREIEA 778
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
823-1540 |
2.15e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 79.39 E-value: 2.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 SQINLLRRHNDELDT--TIKGHQGKiTHLENELHSRSGEIEklnDLNQRLQKEKQdiLNQKLKLdgdvqALKETIRKLEN 900
Cdd:pfam15921 49 TQIPIFPKYEVELDSprKIIAYPGK-EHIERVLEEYSHQVK---DLQRRLNESNE--LHEKQKF-----YLRQSVIDLQT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 901 ELEKLRNENKELVgkEARARDAANQQLSRANLLNK--ELEDT---KQDLKHstDVNKQLEQDIRDLKERLANIGKGGRIS 975
Cdd:pfam15921 118 KLQEMQMERDAMA--DIRRRESQSQEDLRNQLQNTvhELEAAkclKEDMLE--DSNTQIEQLRKMMLSHEGVLQEIRSIL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 976 RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGrdgrdgrDAGNRGTHTITNTK 1055
Cdd:pfam15921 194 VDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKS-------ESQNKIELLLQQHQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1056 ERIERI----EKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndktENDITELKRK 1131
Cdd:pfam15921 267 DRIEQLisehEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQL-------RSELREAKRM 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1132 HAAEIDKLKSDIsALHDKHLSDLDDEKEQYGKAVENLksveDDlrdklnNLEKQLADSLNRENELEREKRdydekinsly 1211
Cdd:pfam15921 340 YEDKIEELEKQL-VLANSELTEARTERDQFSQESGNL----DD------QLQKLLADLHKREKELSLEKE---------- 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1212 gQNQKIkdeWD-DFRNDADKEIQKWKTDAYTVrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1290
Cdd:pfam15921 399 -QNKRL---WDrDTGNSITIDHLRRELDDRNM--EVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLES 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1291 LEDELADTKGNLVQKEMDLESTQnrlRSLEDQHSTLQ----------SDANKWRGELDAALRENDILKSNN---TNMETD 1357
Cdd:pfam15921 473 TKEMLRKVVEELTAKKMTLESSE---RTVSDLTASLQekeraieatnAEITKLRSRVDLKLQELQHLKNEGdhlRNVQTE 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1358 LTRLKNRLKSAEDALKELKNSL--------SHAKT------EKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD 1423
Cdd:pfam15921 550 CEALKLQMAEKDKVIEILRQQIenmtqlvgQHGRTagamqvEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1424 ---TNDKLITSDTER------------------NALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE---D 1479
Cdd:pfam15921 630 lelEKVKLVNAGSERlravkdikqerdqllnevKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQselE 709
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1480 SRLNALQELE------------------ARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRV 1540
Cdd:pfam15921 710 QTRNTLKSMEgsdghamkvamgmqkqitAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1658-2148 |
2.31e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.21 E-value: 2.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1737
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1738 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1817
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1818 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtshEYQLLK 1897
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE---EAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--------------------VSELQRQLQDANTEKN 1957
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavligveaayeaalEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1958 RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLE 2037
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2038 NEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA--QLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2115
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLeaEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER 716
|
490 500 510
....*....|....*....|....*....|...
gi 1767287514 2116 GQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2148
Cdd:COG1196 717 LEEELEEEALEEQLEAEREELLEELLEEEELLE 749
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
692-1456 |
2.99e-14 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 78.91 E-value: 2.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 692 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKIlgelehaqkaaHLAEQQLKEIKiqrd 770
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKnLNKDEEKINNSNNKI-----------KILEQQIKDLN---- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 771 dyqkqkdeharhlfdirHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLE 850
Cdd:TIGR04523 89 -----------------DKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 851 NELhsrsgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEarardaanqqlSRA 930
Cdd:TIGR04523 152 KEL-------EKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKI-----------QKN 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 931 NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvp 1010
Cdd:TIGR04523 214 KSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT---------------------------------------- 253
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1011 aaediesrgggeidipssgdvihgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDR---WK 1087
Cdd:TIGR04523 254 ---------------------------------------QLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQlnqLK 294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1088 RELERLENEKD-----DLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHDKHLSdLDDEKEQYG 1162
Cdd:TIGR04523 295 SEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNE----QISQLKKELTNSESENSE-KQRELEEKQ 369
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1163 KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIkdewddfrndaDKEIQKWKTDAYTV 1242
Cdd:TIGR04523 370 NEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELL-----------EKEIERLKETIIKN 438
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1243 RSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEMDLES-------TQNR 1315
Cdd:TIGR04523 439 NSEIKDLTNQDSVKELIIKNLDNTRESLET-------QLKVLSRSINKIKQNLEQKQKELKSKEKELKKlneekkeLEEK 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1316 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTR--LKNRLKSAEDALKELKNSLSHAKTEKERLQNAF 1393
Cdd:TIGR04523 512 VKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELI 591
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1394 REKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQI 1456
Cdd:TIGR04523 592 DQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
447-970 |
3.62e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 78.57 E-value: 3.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 447 KYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTRSLspgktplpp 525
Cdd:PRK03918 186 KRTENIEELIkEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE------LEKELESL--------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 526 SEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEfLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRT 602
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEfyeEYLDELREIEKRLSRLEEEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 603 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKssTDDARKLRDEMDEH----TNSIQEEFKTRIDELNRRVENLLREN 678
Cdd:PRK03918 330 IKELEEKEERLEELKKKLKELEKRLEELEERHEL--YEEAKAKKEELERLkkrlTGLTPEKLEKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 679 NRLKSEVNPLKDKYRDLE---NEYNSTQRRI----------EEKETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEK 743
Cdd:PRK03918 408 SKITARIGELKKEIKELKkaiEELKKAKGKCpvcgrelteeHRKELLEEYTAELKRieKELKEIEEKERKLRKELRELEK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 744 ILGELEHAQKAAHLAEqQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQdlekngARNNDELDKLRQTISDYES 823
Cdd:PRK03918 488 VLKKESELIKLKELAE-QLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEI------KSLKKELEKLEELKKKLAE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 824 QINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRL---QKEKQDILNQKLKLDGDVQALKETIRKLEN 900
Cdd:PRK03918 561 LEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELkdaEKELEREEKELKKLEEELDKAFEELAETEK 640
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 901 ELEKLRNENKELVGK--EARARDAANQQLSranlLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 970
Cdd:PRK03918 641 RLEELRKELEELEKKysEEEYEELREEYLE----LSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1705-2042 |
1.04e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.40 E-value: 1.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1705 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRqmKSKMVAAeLQARGKEAQLRHLNEQLKNLRTD 1784
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRE--LELALLV-LRLEELREELEELQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1785 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK 1864
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1865 LRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE 1944
Cdd:TIGR02168 335 LAEELAELEEKLEELKE----------ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1945 LQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTEtdLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKK 2024
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330
....*....|....*...
gi 1767287514 2025 EKITLLKKIELLENEKRR 2042
Cdd:TIGR02168 483 ELAQLQARLDSLERLQEN 500
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1707-2026 |
4.58e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.97 E-value: 4.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1707 RYRNIEDNLQDAEEE-----RRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNL 1781
Cdd:COG1196 214 RYRELKEELKELEAEllllkLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1782 RTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsdtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDD 1861
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAEL-------EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1862 TDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 1941
Cdd:COG1196 367 LLEAEAELAEAEEELEELAE----------ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1942 VSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG 2021
Cdd:COG1196 437 EEEEEEALEEAAEEEAELEEEEEALLELL-------AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
....*
gi 1767287514 2022 WKKEK 2026
Cdd:COG1196 510 VKAAL 514
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
420-1202 |
5.70e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 5.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 420 DLLEELRKIrgggssEGDAELH-KELMTKYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL--HE 495
Cdd:TIGR02169 215 ALLKEKREY------EGYELLKeKEALERQKEAIERQLaSLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeEE 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 496 MAQDSEKNVDGTVSIKRTRSlspgktplppsealravrnTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD 575
Cdd:TIGR02169 289 QLRVKEKIGELEAEIASLER-------------------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 576 KQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASfQKSSTDDARKLRDEMDEHTNS 655
Cdd:TIGR02169 350 KRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE-LDRLQEELQRLSEELADLNAA 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 656 I------QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD 729
Cdd:TIGR02169 429 IagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 730 LREKYDRVHTDNEKILGEL--------EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARH----------LFDIRHKLE 791
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHGTVaqlgsvgeRYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRrkagratflpLNKMRDERR 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 792 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDeldtTIKGHQGKI--THLENELHSRSGEI------EKL 863
Cdd:TIGR02169 589 DLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIE----AARRLMGKYrmVTLEGELFEKSGAMtggsraPRG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 864 NDLNQRLQKEKQDILNQKL-KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanqqlSRANLLNKELEDTKQ 942
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLeGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE-------KEIEQLEQEEEKLKE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 943 DLKHSTDVNKQLEQDIRDLKERLANIGKggRIS-RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVpaaEDIESRGGG 1021
Cdd:TIGR02169 738 RLEELEEDLSSLEQEIENVKSELKELEA--RIEeLEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL---EEEVSRIEA 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1022 EIDipsSGDVIHGRDGRDGRDAGNRgthtITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKR---ELERLENEKD 1098
Cdd:TIGR02169 813 RLR---EIEQKLNRLTLEKEYLEKE----IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEleaALRDLESRLG 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1099 DLERRIRELEDELSQIGRGNDKTENDItELKRKHAAEidkLKSDISALHDKhLSDLDDEKEQ----------YGKAVENL 1168
Cdd:TIGR02169 886 DLKKERDELEAQLRELERKIEELEAQI-EKKRKRLSE---LKAKLEALEEE-LSEIEDPKGEdeeipeeelsLEDVQAEL 960
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 1169 KSVE------------------------DDLRDKLNNLEKQLADSLNRENELEREKRD 1202
Cdd:TIGR02169 961 QRVEeeiralepvnmlaiqeyeevlkrlDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1864-2148 |
6.06e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.59 E-value: 6.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1864 KLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 1943
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1944 ELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWK 2023
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2024 KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNcaQLQQQIAQLEMENGNRILELTNKQREE 2103
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEA--LAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1767287514 2104 QERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2148
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEA 501
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
651-1449 |
8.78e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.38 E-value: 8.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 651 EHTNSIQEEFKTRIDELNRRvenlLRENNRLKSevnplKDKYRdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDL 730
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRR----LNESNELHE-----KQKFY-LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 731 REKY-DRVHtdnekilgELEHAQKaahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLeteikgrQDLEKNGARNND 809
Cdd:pfam15921 144 RNQLqNTVH--------ELEAAKC---LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSIL-------VDFEEASGKKIY 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDKLrqTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklNDLNQRLQKEKQDILNQKLKLDGDVQ 889
Cdd:pfam15921 206 EHDSM--STMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQ--NKIELLLQQHQDRIEQLISEHEVEIT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 890 ALKETIRKLENELEKLRNEnKELVGKEARARDAAN-QQLSranllnkELEDTKQDLKHSTDVNKQLEQD-IRDLKERL-- 965
Cdd:pfam15921 282 GLTEKASSARSQANSIQSQ-LEIIQEQARNQNSMYmRQLS-------DLESTVSQLRSELREAKRMYEDkIEELEKQLvl 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 966 ANigkggriSRDSTTGTDGGAFGDRSSVADPSRTRGAAGstvfvpaaediesrgggeidipssgdvIHGRDgrdgrdagn 1045
Cdd:pfam15921 354 AN-------SELTEARTERDQFSQESGNLDDQLQKLLAD---------------------------LHKRE--------- 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1046 rgtHTITNTKERieriEKNILDRYHDDEL-VEHKIREVNDRwKRELERLENEKDDLERRIR-ELEDELSQIGRGNDKTEN 1123
Cdd:pfam15921 391 ---KELSLEKEQ----NKRLWDRDTGNSItIDHLRRELDDR-NMEVQRLEALLKAMKSECQgQMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1124 ---------DITELKRKHAAEIDKLKSDISAlHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNREN 1194
Cdd:pfam15921 463 vssltaqleSTKEMLRKVVEELTAKKMTLES-SERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGD 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1195 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvrseAKALETTNTALKAQLQAANDRIDHLTKTV 1274
Cdd:pfam15921 542 HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT--------AGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1275 NDHTSKVRDLTSQVRHLEDEladtKGNLVQkemdleSTQNRLRSLED---QHSTLQSDANKWRGELDAALRENDILKSNN 1351
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELE----KVKLVN------AGSERLRAVKDikqERDQLLNEVKTSRNELNSLSEDYEVLKRNF 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1352 TN----METDLTRLKNRLKSAEDALKELKNSLshaktekERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDK 1427
Cdd:pfam15921 684 RNkseeMETTTNKLKMQLKSAQSELEQTRNTL-------KSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEA 756
|
810 820
....*....|....*....|..
gi 1767287514 1428 LITSDTERNALRNELQKLSQEL 1449
Cdd:pfam15921 757 MTNANKEKHFLKEEKNKLSQEL 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
466-968 |
1.24e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 73.80 E-value: 1.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 466 QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvsikrtrslspgktplppsEALRAVRNtfrNKDNDIQQ 545
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELD---------------------ELEAQIRG---NGGDRLEQ 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 546 LERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQK----SVDEAERNSRRTDDKLRASEAERVAAEKARK 621
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAeaaaLLEALEEELEALEEALAEAEAALRDLRRELR 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 622 FLEDELAKLQASfQKSSTDDARKLRDEMDEHTNSIQEE---------------------------FKTRI-------DEL 667
Cdd:COG4913 423 ELEAEIASLERR-KSNIPARLLALRDALAEALGLDEAElpfvgelievrpeeerwrgaiervlggFALTLlvppehyAAA 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 668 NRRVENL-LREnnRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQIRY-----------------SDDIRRNIQ---- 724
Cdd:COG4913 502 LRWVNRLhLRG--RLVYErVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwleaelgrrfdyvcvdsPEELRRHPRaitr 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 725 ----KDLDDLREKYDRVHTDNEKILG------------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLF---- 784
Cdd:COG4913 580 agqvKGNGTRHEKDDRRRIRSRYVLGfdnraklaaleaELAELEEELAEAEERLEALEAELDALQERREALQRLAEyswd 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 785 DIRHK-LETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL---------H 854
Cdd:COG4913 660 EIDVAsAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdelqdrleaA 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 855 SRSGEIEKLNDLNQRLQKEKQDILNQKLK--LDGDVQALKETIRKLENELEKLRNENKE---LVGKEARARDAANQQLSR 929
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRenLEERIDALRARLNRAEEELERAMRAFNRewpAETADLDADLESLPEYLA 819
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 930 --ANLLNKELEDTKQDLKHS---------TDVNKQLEQDIRDLKERLANI 968
Cdd:COG4913 820 llDRLEEDGLPEYEERFKELlnensiefvADLLSKLRRAIREIKERIDPL 869
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1665-2073 |
1.84e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 72.75 E-value: 1.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1665 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEER---------------------R 1723
Cdd:TIGR04523 205 NLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQnkikkqlsekqkeleqnnkkiK 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1724 ALESRLQSAKTLL-----RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD------- 1791
Cdd:TIGR04523 285 ELEKQLNQLKSEIsdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESEnsekqre 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1792 --------------IRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELdgalrlsDSKVQD 1857
Cdd:TIGR04523 365 leekqneieklkkeNQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERL-------KETIIK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1858 MKDDTDKLRRDLTKAESVENELRKTIDIQ----SKTSHEYQLLKDQLLNTQNELngannrkQQLENELLNVRSEVRDYKQ 1933
Cdd:TIGR04523 438 NNSEIKDLTNQDSVKELIIKNLDNTRESLetqlKVLSRSINKIKQNLEQKQKEL-------KSKEKELKKLNEEKKELEE 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1934 RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETdlRQQLETAKNEKRvatKELEDLKRRLAQLENERR 2013
Cdd:TIGR04523 511 KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK--KENLEKEIDEKN---KEIEELKQTQKSLKKKQE 585
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 2014 NSSQLSDGWKKEKITLLKKIEL-------LENEKRRTDAAIRETALQREAIEKSLNAMERENKELYK 2073
Cdd:TIGR04523 586 EKQELIDQKEKEKKDLIKEIEEkekkissLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1762-2139 |
2.49e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.78 E-value: 2.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1762 LQARGKEA--QLRHLNEQLKNLrtdldnahTDIrsLRDKEEQWDSSRFQLETkmresdsdTNKYQ-LQIASFESERQILT 1838
Cdd:TIGR02168 170 YKERRKETerKLERTRENLDRL--------EDI--LNELERQLKSLERQAEK--------AERYKeLKAELRELELALLV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1839 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRktiDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1918
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR---LEVSELEEEIEELQKELYALANEISRLEQQKQILR 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1919 NELLNVrseVRDYKQrvhdVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKEL 1998
Cdd:TIGR02168 309 ERLANL---ERQLEE----LEAQLEELESKLDELAEELAELEEKLEELKEELE-------SLEAELEELEAELEELESRL 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1999 EDLKrrlAQLENERRNSSQlsdgwkkekitLLKKIELLENEKRRTDAairetalQREAIEKSLNAMERENKELYKNCAQL 2078
Cdd:TIGR02168 375 EELE---EQLETLRSKVAQ-----------LELQIASLNNEIERLEA-------RLERLEDRRERLQQEIEELLKKLEEA 433
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 2079 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVI---ENRERTHRNRIKQLEDQ 2139
Cdd:TIGR02168 434 ELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALdaaERELAQLQARLDSLERL 497
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1659-2147 |
3.15e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.40 E-value: 3.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1659 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAK----- 1733
Cdd:TIGR02168 360 LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkelq 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1734 ----------TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQ-- 1801
Cdd:TIGR02168 440 aeleeleeelEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGls 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1802 ------WDSSRFQ------LETKMRES-----DSDTNKYQLQIASFESER----------QILTEKIKELDGALRLSDSK 1854
Cdd:TIGR02168 520 gilgvlSELISVDegyeaaIEAALGGRlqavvVENLNAAKKAIAFLKQNElgrvtflpldSIKGTEIQGNDREILKNIEG 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1855 VQDMKDDTDKLRRDLTKAES-------VENELRKTIDIQSKTSHEYQLLKDQ--------------------LLNTQNEL 1907
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgdlvrpggvitggsaktnssILERRREI 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1908 NGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETA 1987
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1988 KNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERE 2067
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2068 NKELykncaqlqqqiaQLEMENGNRILELTNKQREEQ-------ERQLIRMRQEKGQIEKVIENRE----------RTHR 2130
Cdd:TIGR02168 840 LEDL------------EEQIEELSEDIESLAAEIEELeelieelESELEALLNERASLEEALALLRseleelseelRELE 907
|
570
....*....|....*..
gi 1767287514 2131 NRIKQLEDQIAILRDQL 2147
Cdd:TIGR02168 908 SKRSELRRELEELREKL 924
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
718-1337 |
4.10e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.99 E-value: 4.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 718 DIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR 797
Cdd:PRK02224 173 DARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGL--ESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 798 QDLEKNGArnndELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDI 877
Cdd:PRK02224 251 EELETLEA----EIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEEL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 878 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARdaanqqlsranlLNKELEDTKQDLKHSTDVNKQLEQD 957
Cdd:PRK02224 327 RDRLEECRVAAQAHNEEAESLREDADDLEERAEEL--REEAAE------------LESELEEAREAVEDRREEIEELEEE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 958 IRDLKERLANigkggrisrdstTGTDGGAFGDRSS--VADPSRTRGAAGSTvfvpaaediesrgggEIDIPSSGDVIhgR 1035
Cdd:PRK02224 393 IEELRERFGD------------APVDLGNAEDFLEelREERDELREREAEL---------------EATLRTARERV--E 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1036 DGRDGRDAGNRGT-----------HTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK--RELERLENEKDDLER 1102
Cdd:PRK02224 444 EAEALLEAGKCPEcgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEaeDRIERLEERREDLEE 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1103 RIRELEDELsqigrgndktenditELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDL------R 1176
Cdd:PRK02224 524 LIAERRETI---------------EEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLaelkerI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1177 DKLNNLEKQLADSLNRENELE--REKRdydekinslygqnqKIKDEWDDFRNDADKEIQKWKTDAytvrsEAKALETTNT 1254
Cdd:PRK02224 589 ESLERIRTLLAAIADAEDEIErlREKR--------------EALAELNDERRERLAEKRERKREL-----EAEFDEARIE 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1255 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1334
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVEALEALYDEAEELESMYGDLR 728
|
...
gi 1767287514 1335 GEL 1337
Cdd:PRK02224 729 AEL 731
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1715-2061 |
4.70e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1715 LQDAEEERRALESRLQSAKTLLrsqEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRS 1794
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLII---DEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1795 LRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE 1873
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1874 SVENELRKTIDIQSKTSHEYQLLKDQLL----NTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 1949
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRDKLTeeyaELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1950 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2029
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKL 488
|
330 340 350
....*....|....*....|....*....|..
gi 1767287514 2030 LKKIELLENEKRRTDAAIRETALQREAIEKSL 2061
Cdd:TIGR02169 489 QRELAEAEAQARASEERVRGGRAVEEVLKASI 520
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
544-1450 |
5.04e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.69 E-value: 5.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 544 QQLERKLKIAESQVKEFLNKFENADEARrrlDKQFADAKREISNLQKSVDEA--ERNSRrTDDKLRASEAErvaaEKARK 621
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELH---EKQKFYLRQSVIDLQTKLQEMqmERDAM-ADIRRRESQSQ----EDLRN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 622 FLEDELAKLQAS------FQKSSTDDARKLRDEMDEHTNSIQEEFKTRID---------------------ELNRRVENL 674
Cdd:pfam15921 146 QLQNTVHELEAAkclkedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDfeeasgkkiyehdsmstmhfrSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 675 LRENNR----LKSEVNPLKDKYRDLENEynsTQRRIEEKETQirYSDDIRRNIQK---DLDDLREKYDRVHTDNEKILGE 747
Cdd:pfam15921 226 LRELDTeisyLKGRIFPVEDQLEALKSE---SQNKIELLLQQ--HQDRIEQLISEhevEITGLTEKASSARSQANSIQSQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 748 LEHAQKAA---------HLAE------QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELD 812
Cdd:pfam15921 301 LEIIQEQArnqnsmymrQLSDlestvsQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 813 KLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---------- 882
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMaaiqgknesl 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 883 ----KLDGDVQALKETIRKLENEL--EKLRNENKEL--------VGKEARARDAANQQL----SRANLLNKELEDTKQDL 944
Cdd:pfam15921 461 ekvsSLTAQLESTKEMLRKVVEELtaKKMTLESSERtvsdltasLQEKERAIEATNAEItklrSRVDLKLQELQHLKNEG 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 945 KHSTDVNKQLEQdirdLKERLANIGKGGRISRdsttgtdggafgdrssvadpsrtrgaagstvfvpaaEDIESrgggeid 1024
Cdd:pfam15921 541 DHLRNVQTECEA----LKLQMAEKDKVIEILR------------------------------------QQIEN------- 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1025 ipssgdvIHGRDGRDGRDAGNRgthtitntkerieRIEKNILDryhddelvehkiREVNDRwKRELERLENEKDDLERRI 1104
Cdd:pfam15921 574 -------MTQLVGQHGRTAGAM-------------QVEKAQLE------------KEINDR-RLELQEFKILKDKKDAKI 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1105 RELEDELSQIgrgndktenditelkrkhaaEIDKLKsdisalhdkhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1184
Cdd:pfam15921 621 RELEARVSDL--------------------ELEKVK-------------LVNAGSERLRAVKDIKQERDQLLNEVKTSRN 667
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1185 QLaDSLNRENELerEKRDYDEKINSLYGQNQKIKdewddfrndadKEIQKWKTDAYTVRSEAKALETTNT-ALKAQLQaa 1263
Cdd:pfam15921 668 EL-NSLSEDYEV--LKRNFRNKSEEMETTTNKLK-----------MQLKSAQSELEQTRNTLKSMEGSDGhAMKVAMG-- 731
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1264 ndridhLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLESTQNRlrsLEDQHSTLQSDANKWRGELDAALRE 1343
Cdd:pfam15921 732 ------MQKQITAKRGQIDALQSKIQFLEEAMT----NANKEKHFLKEEKNK---LSQELSTVATEKNKMAGELEVLRSQ 798
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1344 NDILKSNNTNMETDLTRLKNRLKSAEDALKE-----LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQfdTKLTKLR 1418
Cdd:pfam15921 799 ERRLKEKVANMEVALDKASLQFAECQDIIQRqeqesVRLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASF--TRTHSNV 876
|
970 980 990
....*....|....*....|....*....|....*.
gi 1767287514 1419 NELQDTNDKLITSDTERNALRN----ELQKLSQELK 1450
Cdd:pfam15921 877 PSSQSTASFLSHHSRKTNALKEdptrDLKQLLQELR 912
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
677-1332 |
7.80e-12 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 71.09 E-value: 7.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 677 ENNRLKSEVNPLKDKYRDLENEYNStqrrIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAH 756
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEISN----IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 757 LAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhnDELD 836
Cdd:PRK01156 236 NLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDI----ENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 837 TTIKGHQGKITHLEnELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKE 916
Cdd:PRK01156 312 QILSNIDAEINKYH-AIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 917 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRI-SRDSTTGTDGGAFGDRSSvad 995
Cdd:PRK01156 391 AFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMlNGQSVCPVCGTTLGEEKS--- 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 996 psrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgRDAGNRGTHTITNTKERIERIEKNILDRyhdDELV 1075
Cdd:PRK01156 468 ---------------------------------------------NHIINHYNEKKSRLEEKIREIEIEVKDI---DEKI 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1076 EHKIREVNDRWKRELERLENEKDDLERRIRELEDElsqigrgndktENDITELKRKHaaeiDKLKSDISALHDKHLSDLD 1155
Cdd:PRK01156 500 VDLKKRKEYLESEEINKSINEYNKIESARADLEDI-----------KIKINELKDKH----DKYEEIKNRYKSLKLEDLD 564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1156 DEKEQYGKAVENLKSVE-DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGqnqKIKDEWDDFRNDAdKEIQK 1234
Cdd:PRK01156 565 SKRTSWLNALAVISLIDiETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIR---EIENEANNLNNKY-NEIQE 640
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1235 WKTDAYTVRSEAKalettntalkaQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQN 1314
Cdd:PRK01156 641 NKILIEKLRGKID-----------NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRT 709
|
650
....*....|....*...
gi 1767287514 1315 RLRSLEDQHSTLQSDANK 1332
Cdd:PRK01156 710 RINELSDRINDINETLES 727
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1667-2071 |
8.80e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.84 E-value: 8.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1667 QSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQR 1746
Cdd:PRK02224 310 EAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEL 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1747 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdSSRFQLETKMRESDSD------- 1819
Cdd:PRK02224 390 EEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEE--AEALLEAGKCPECGQPvegsphv 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1820 --TNKYQLQIASFESERQILTEKIKELDGALrlsdSKVQDMKDDTDKLRRDLTKAESVEnelrKTIDIQSKTSHEYQLLK 1897
Cdd:PRK02224 468 etIEEDRERVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIERLEERREDLE----ELIAERRETIEEKRERA 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLlntqnelngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflsvekvVNTMRTTE 1977
Cdd:PRK02224 540 EEL----------RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER--------IRTLLAAI 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1978 TDLRQQLETaKNEKRVATKELEDLKRRLAQLENERRnsSQLSDGWKKEKITLLK-KIELLENEKRRTDAAIRETALQREA 2056
Cdd:PRK02224 602 ADAEDEIER-LREKREALAELNDERRERLAEKRERK--RELEAEFDEARIEEAReDKERAEEYLEQVEEKLDELREERDD 678
|
410
....*....|....*
gi 1767287514 2057 IEKSLNAMERENKEL 2071
Cdd:PRK02224 679 LQAEIGAVENELEEL 693
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1658-2126 |
9.42e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.86 E-value: 9.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTI------NQKETRYRNIEDNLQDAEEERRALESRLQS 1731
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIklsefyEEYLDELREIEKRLSRLEEEINGIEERIKE 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1732 AKTLLRSQEEALKQRDE-ERRQMKSKMVAAELQ-ARGKEAQLRHLNEQLKNLrtDLDNAHTDIRSLRDKEEQWDSSRFQL 1809
Cdd:PRK03918 333 LEEKEERLEELKKKLKElEKRLEELEERHELYEeAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKI 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1810 ETKMRESDSDTNKYQLQIASFESERQI-------LTEKIKEldGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKT 1882
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKAKGKcpvcgreLTEEHRK--ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKV 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1883 IDIQSKTSHEYQLLkDQLLNTQNELNGANNRKQQLENEllnvrsEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEdr 1962
Cdd:PRK03918 489 LKKESELIKLKELA-EQLKELEEKLKKYNLEELEKKAE------EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA-- 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1963 flSVEKVVNTMRTTETDLRQQLEtaknekRVATKELEDLKRRLAQLENERRNSSQLSDGwKKEKITLLKKIELLENEKRR 2042
Cdd:PRK03918 560 --ELEKKLDELEEELAELLKELE------ELGFESVEELEERLKELEPFYNEYLELKDA-EKELEREEKELKKLEEELDK 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2043 TDAAIRETALQREAIEKSLNAMERE-NKELYKNcAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKV 2121
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKySEEEYEE-LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
....*
gi 1767287514 2122 IENRE 2126
Cdd:PRK03918 710 KKELE 714
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
691-1537 |
1.12e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 691 KYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLrEKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRD 770
Cdd:TIGR02169 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA-ERYQALLKEKREYEGYELLKEKEAL--ERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 771 DYQKQKDEHARHLFDIRHKLET-EIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHL 849
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEiEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 850 ENELHSRSGEIEKLNDLNQRLQKEKQdilnqklkldgdvqALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSR 929
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRD--------------KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 930 ANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgAAGSTVFV 1009
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGI---------------------------------EAKINELE 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1010 PAAEDIesrgggeidipssgdvihgrdgrdgrdagnrgthtitntKERIERIEKNIldryhddelveHKIREVNDRWKRE 1089
Cdd:TIGR02169 441 EEKEDK---------------------------------------ALEIKKQEWKL-----------EQLAADLSKYEQE 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1090 LERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVE--- 1166
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEA----EAQARASEERVRGGRAVEEVLKASIQGVHGT-VAQLGSVGERYATAIEvaa 545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1167 ----NLKSVEDD---------LRDKlnNLEKQLADSLNRENELEREKR---------------DYDEKINSLYGQN---- 1214
Cdd:TIGR02169 546 gnrlNNVVVEDDavakeaielLKRR--KAGRATFLPLNKMRDERRDLSilsedgvigfavdlvEFDPKYEPAFKYVfgdt 623
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1215 ------QKIKDEWDDFRN-DADKEIQKwKTDAYTVRSEA-KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTS 1286
Cdd:TIGR02169 624 lvvediEAARRLMGKYRMvTLEGELFE-KSGAMTGGSRApRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1287 QVRHLEDELADTKGNLVQKEMDLEStqnrlrsledqhstLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1366
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQ--------------LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1367 SAEDALKELKNSLshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNalrnELQKLS 1446
Cdd:TIGR02169 769 ELEEDLHKLEEAL--NDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQ----ELQEQR 842
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1447 QELKFGNEQIQRKSDEYQTTIDDLAhshrvsedsrlnalQELEARKYEINDLTSRL-------DSTEQRLATLQQDYIKA 1519
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENLNGKKEELE--------------EELEELEAALRDLESRLgdlkkerDELEAQLRELERKIEEL 908
|
890
....*....|....*...
gi 1767287514 1520 DSERDILSDALRRFQSSA 1537
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKL 926
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
472-1210 |
1.51e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 1.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 472 LEAELRRNREKLnEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSpgktplppsEALRAVRNTFRNKDNDIQQLERKLK 551
Cdd:COG1196 194 ILGELERQLEPL-ERQAEKAERYRELKEELKELEAELLLLKLRELE---------AELEELEAELEELEAELEELEAELA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 552 IAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQ 631
Cdd:COG1196 264 ELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 632 ASfqksstddarklrdemdehtnsiQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 711
Cdd:COG1196 344 EE-----------------------LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 712 QIrysddirRNIQKDLDDLREkydrvhtdnekilgELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLE 791
Cdd:COG1196 401 QL-------EELEEAEEALLE--------------RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 792 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlenELHSRSGEIEKLNDLNQRLQ 871
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY----------------EGFLEGVKAALLLAGLRGLA 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 872 KEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANqQLSRANLLnkELEDTKQDLKHSTDVN 951
Cdd:COG1196 524 GAVAVLI-------GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAA-KAGRATFL--PLDKIRARAALAAALA 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 952 KQLEQDIRDLKERLAnigkggrISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDV 1031
Cdd:COG1196 594 RGAIGAAVDLVASDL-------READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1032 IHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREV--NDRWKRELERLENEKDDLERRIRELED 1109
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLeeELEEEALEEQLEAEREELLEELLEEEE 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1110 ELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALhdkhlsdlddekeqyGkAVeNLKSVE--DDLRDKLNNLEKQLA 1187
Cdd:COG1196 747 LLEEEALEELPEPPDLEELER----ELERLEREIEAL---------------G-PV-NLLAIEeyEELEERYDFLSEQRE 805
|
730 740
....*....|....*....|...
gi 1767287514 1188 DslnreneLEREKRDYDEKINSL 1210
Cdd:COG1196 806 D-------LEEARETLEEAIEEI 821
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
785-1395 |
1.54e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.09 E-value: 1.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 785 DIRHKLETEIKGRQDLE---KNGARNNDELDKLRQTISDY---ESQI-NLLRRHNDELDTTIKghqgKITHLENELHSRS 857
Cdd:PRK03918 145 ESREKVVRQILGLDDYEnayKNLGEVIKEIKRRIERLEKFikrTENIeELIKEKEKELEEVLR----EINEISSELPELR 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 858 GEIEKLNDLNQRLQKEKQDILN---QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLsRANLLN 934
Cdd:PRK03918 221 EELEKLEKEVKELEELKEEIEElekELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAE-EYIKLS 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 935 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpAAED 1014
Cdd:PRK03918 300 EFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE----------------------------------------KEER 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1015 IESRGGGEIDIPSSGDVIHGRdgrdgrdagNRGTHTITNTKERIERIEKNILDRyhDDELVEHKIREVNDRWK---RELE 1091
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEER---------HELYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEeieEEIS 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1092 RLENEKDDLERRIRELEDELSQIGRGNDK--------TENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1163
Cdd:PRK03918 409 KITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEK-ERKLRKELRELEK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1164 AVENLK--SVEDDLRDKLNNLEKQLaDSLNREnELEREKRDYD---EKINSLYGQNQKIKDEWddfrndadKEIQKWKTD 1238
Cdd:PRK03918 488 VLKKESelIKLKELAEQLKELEEKL-KKYNLE-ELEKKAEEYEklkEKLIKLKGEIKSLKKEL--------EKLEELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1239 AYTVRSEAKALETTNTALKAQLQAA--------NDRIDHLTKTVNDHTSkVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1310
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELgfesveelEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELA 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1311 STQNRLRSLEDQHSTLQSDANKwrgeldaalRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQ 1390
Cdd:PRK03918 637 ETEKRLEELRKELEELEKKYSE---------EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE 707
|
....*
gi 1767287514 1391 NAFRE 1395
Cdd:PRK03918 708 KAKKE 712
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
536-1184 |
1.92e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 69.71 E-value: 1.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 536 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVA 615
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISS-------ELPELREELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 616 AEKARKFLEdELAKLQASFQKSstddARKLRDEMDEHTNSIqEEFKTRIDELNRRVENLlrennrlkSEVNPLKDKYRDL 695
Cdd:PRK03918 233 LEELKEEIE-ELEKELESLEGS----KRKLEEKIRELEERI-EELKKEIEELEEKVKEL--------KELKEKAEEYIKL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 696 E---NEYNSTQRRIEEKETqiRYSDDIrRNIQKDLDDLREKYDRVhtdnEKILGELEHAQ------KAAHLAEQQLKEIK 766
Cdd:PRK03918 299 SefyEEYLDELREIEKRLS--RLEEEI-NGIEERIKELEEKEERL----EELKKKLKELEkrleelEERHELYEEAKAKK 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 767 IQRDDYQKQKDEhaRHLFDIRHKLETEIKGRQDLEKngarnndELDKLRQTISDYESQINLLRRHNDELdttiKGHQGKI 846
Cdd:PRK03918 372 EELERLKKRLTG--LTPEKLEKELEELEKAKEEIEE-------EISKITARIGELKKEIKELKKAIEEL----KKAKGKC 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 847 ---------THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETI--RKLENELEKLRNENKELVGK 915
Cdd:PRK03918 439 pvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIklKELAEQLKELEEKLKKYNLE 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 916 EARARDAANQQL-SRANLLNKELEDTKQDLKHSTDVNKQ---LEQDIRDLKERLANIGKggrisrdsttgtdggafgdrs 991
Cdd:PRK03918 519 ELEKKAEEYEKLkEKLIKLKGEIKSLKKELEKLEELKKKlaeLEKKLDELEEELAELLK--------------------- 577
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 992 svadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgrDAGNRGTHTITNTKERIERIEKnILDRYhd 1071
Cdd:PRK03918 578 --------------------------------------------------ELEELGFESVEELEERLKELEP-FYNEY-- 604
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1072 delveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKHL 1151
Cdd:PRK03918 605 -----LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSEEEYEELREEYLELSREL 675
|
650 660 670
....*....|....*....|....*....|...
gi 1767287514 1152 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1184
Cdd:PRK03918 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1827-2176 |
2.17e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 2.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1827 IASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI-QSKTSHEYQLLKDQLLNTQN 1905
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYeGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1906 ELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELqrqlqdANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLE 1985
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL------GEEEQLRVKEKIGELEAEIASLERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1986 TAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2065
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2066 RENKELYKNCAQLQQQIAQLEMENGN----------RILEL----TNKQRE--EQERQLIRMRQEKGQIEKVIENRERTH 2129
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADlnaaiagieaKINELeeekEDKALEikKQEWKLEQLAADLSKYEQELYDLKEEY 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2130 R---NRIKQLEDQIAILRDQLDGERRRRREYVDRSMVndigrLGSNVLGI 2176
Cdd:TIGR02169 479 DrveKELSKLQRELAEAEAQARASEERVRGGRAVEEV-----LKASIQGV 523
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
252-973 |
3.08e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.40 E-value: 3.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 252 IARLDEERRRSDEYRmQWENERQKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQR 331
Cdd:PTZ00121 1156 IARKAEDARKAEEAR-KAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEE 1234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 332 VRKQFSDLKTHTEEDLDKQKAEFTRAiRNVNNISRNAAFSAgagdglglygledggdvnrttnnYEKVFIETIKRMNGTG 411
Cdd:PTZ00121 1235 AKKDAEEAKKAEEERNNEEIRKFEEA-RMAHFARRQAAIKA-----------------------EEARKADELKKAEEKK 1290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 412 GAGSASSAdllEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGAlK 491
Cdd:PTZ00121 1291 KADEAKKA---EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK-A 1366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 492 KLHEMAQDSEKnvdgtvsiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAEsQVKEFLNKFENADEAR 571
Cdd:PTZ00121 1367 EAAEKKKEEAK--------KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD-EAKKKAEEKKKADEAK 1437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 572 RRldkqfADAKREISNLQKSVDE---AERNSRRTDDKLRASEAERVAAEKARKfledELAKLQASFQKSSTDDARKLRDE 648
Cdd:PTZ00121 1438 KK-----AEEAKKADEAKKKAEEakkAEEAKKKAEEAKKADEAKKKAEEAKKA----DEAKKKAEEAKKKADEAKKAAEA 1508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 649 MDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQirysdDIRRNIQKDLD 728
Cdd:PTZ00121 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA-----EEDKNMALRKA 1583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 729 DLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 808
Cdd:PTZ00121 1584 EEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEE---LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 809 DELDKLRQTISDYESQINLLRRHNDELDTTikghqgkithlENELHSRSGEIEKLNDLNQRLQKEKQDIlnQKLKLDGDV 888
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-----------AEALKKEAEEAKKAEELKKKEAEEKKKA--EELKKAEEE 1727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 889 QALK-ETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQD--IRDLKERL 965
Cdd:PTZ00121 1728 NKIKaEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDkkIKDIFDNF 1807
|
....*...
gi 1767287514 966 ANIGKGGR 973
Cdd:PTZ00121 1808 ANIIEGGK 1815
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1863-2148 |
3.18e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.32 E-value: 3.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1863 DKLRRDLTKAESVENELRK---TIDIQSKTSHEYQLLKDQLLNTQNELNGanNRKQQLENELLNVRSEVRDYKQRVHDVN 1939
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERqlkSLERQAEKAERYKELKAELRELELALLV--LRLEELREELEELQEELKEAEEELEELT 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1940 NRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS 2019
Cdd:TIGR02168 260 AELQELEEKLEELRLEVSELEEEIEELQKELY-------ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2020 DGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEME---NGNRILEL 2096
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierLEARLERL 412
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 2097 T-NKQREEQERQLIRMRQEKGQIEKVIEN-------------RERTHRNRIKQLEDQIAILRDQLD 2148
Cdd:TIGR02168 413 EdRRERLQQEIEELLKKLEEAELKELQAEleeleeeleelqeELERLEEALEELREELEEAEQALD 478
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1666-2147 |
3.54e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.94 E-value: 3.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1666 LQSLLNKIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKtllrsqeEALKQ 1745
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQ-------RLSEELADLNAAIAGIEAKINELEEEKEDKA-------LEIKK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1746 RDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkEEQWDSSRFQLETK---------MRES 1816
Cdd:TIGR02169 453 QEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE--ERVRGGRAVEEVLKasiqgvhgtVAQL 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1817 DSDTNKYQLQIASFESER----------------QILteKIKELDGALRLSDSKVQDMKDDTDKLRR------------- 1867
Cdd:TIGR02169 531 GSVGERYATAIEVAAGNRlnnvvveddavakeaiELL--KRRKAGRATFLPLNKMRDERRDLSILSEdgvigfavdlvef 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1868 DLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNEL---NGA-------------------------NNRKQQLEN 1919
Cdd:TIGR02169 609 DPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGELfekSGAmtggsraprggilfsrsepaelqrlRERLEGLKR 688
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1920 ELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 1999
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2000 DLKRRLAQLENERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIRET--ALQREAIEKSLNAMERENKELYKNCAQ 2077
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQ--AELSKLEEEVSRIEARLREIeqKLNRLTLEKEYLEKEIQELQEQRIDLK 846
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 2078 LQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRE---RTHRNRIKQLEDQIAILRDQL 2147
Cdd:TIGR02169 847 EQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEaqlRELERKIEELEAQIEKKRKRL 919
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1099-1528 |
4.22e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 68.53 E-value: 4.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1099 DLERRIRELEDEL-SQIgrgNDKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlDDEKEQYGKAVENLKSVEDDlRD 1177
Cdd:PRK02224 180 RVLSDQRGSLDQLkAQI---EEKEEKDLHERLNGLESELAELDEEIERYEEQR----EQARETRDEADEVLEEHEER-RE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1178 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEiqkwKTDAYTVRSEAKALETTNTAL- 1256
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLD----DADAEAVEARREELEDRDEELr 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1257 ------KAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDA 1330
Cdd:PRK02224 328 drleecRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1331 NKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK--------------NSLSHAKTEKERL------- 1389
Cdd:PRK02224 408 GNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvETIEEDRERVEELeaeledl 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1390 ---QNAFREKTKQADHLNQLASQFDTKLTKLRN--ELQDTNDKLITSDTERNA-LRNELQKLSQELKFGNEQIQRKSDEY 1463
Cdd:PRK02224 488 eeeVEEVEERLERAEDLVEAEDRIERLEERREDleELIAERRETIEEKRERAEeLRERAAELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1464 QTTIDDLA--HSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQdyiKADSERDILSD 1528
Cdd:PRK02224 568 EEAREEVAelNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAE---LNDERRERLAE 631
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
442-955 |
4.24e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.61 E-value: 4.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIErniELESrgddsQRKIAELE-AELRRNREKLNEAQGALK-KLHEMAQDSEKNvDGTVSIKRTRSLSPG 519
Cdd:pfam15921 334 REAKRMYEDKIE---ELEK-----QLVLANSElTEARTERDQFSQESGNLDdQLQKLLADLHKR-EKELSLEKEQNKRLW 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 520 KTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAES----QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEA 595
Cdd:pfam15921 405 DRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEEL 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 596 E------RNSRRT--------DDKLRASEAERVAAEKARKFLEDELAKLQasFQKSSTDDARKLRDEMDEHTNSIQEEFK 661
Cdd:pfam15921 485 TakkmtlESSERTvsdltaslQEKERAIEATNAEITKLRSRVDLKLQELQ--HLKNEGDHLRNVQTECEALKLQMAEKDK 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 662 TrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNStqRRIEEKETQI--RYSDDIRRNIQKDLDDLR-EKYDRVH 738
Cdd:pfam15921 563 V-IEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEIND--RRLELQEFKIlkDKKDAKIRELEARVSDLElEKVKLVN 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 739 TDNEKILGELEHAQKAahlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 818
Cdd:pfam15921 640 AGSERLRAVKDIKQER----DQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTL 715
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 819 SDYESQinllrrhNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 898
Cdd:pfam15921 716 KSMEGS-------DGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 899 ENELEKLRNENKELVGKEAR---ARDAANQQLSRAN--LLNKELEDTKQDLKHSTDVnKQLE 955
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANmevALDKASLQFAECQdiIQRQEQESVRLKLQHTLDV-KELQ 849
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1051-1515 |
4.40e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.55 E-value: 4.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKR 1130
Cdd:PRK03918 202 LEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1131 KhAAEIDKLKSD------ISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------KLNNLEKQLADSLNRENELER 1198
Cdd:PRK03918 281 K-VKELKELKEKaeeyikLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEleekeeRLEELKKKLKELEKRLEELEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1199 EKRDYdEKINSLYGQNQKIKDEWDDFR-NDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT---- 1273
Cdd:PRK03918 360 RHELY-EEAKAKKEELERLKKRLTGLTpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkc 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1274 ---------------VNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDL--ESTQNRLRSLEDQHSTLQSDANKWRGE 1336
Cdd:PRK03918 439 pvcgrelteehrkelLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLkkESELIKLKELAEQLKELEEKLKKYNLE 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1337 -LDAALRENDILKSNNTNMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQNAFREKT-KQADHLNQLASQFD 1411
Cdd:PRK03918 519 eLEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1412 T------KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDlaHSHRVSEDSRLNAL 1485
Cdd:PRK03918 599 PfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSE--EEYEELREEYLELS 672
|
490 500 510
....*....|....*....|....*....|
gi 1767287514 1486 QELEARKYEINDLTSRLDSTEQRLATLQQD 1515
Cdd:PRK03918 673 RELAGLRAELEELEKRREEIKKTLEKLKEE 702
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
250-964 |
5.10e-11 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 68.53 E-value: 5.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 250 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKD----KEKTFINRERNLAQYLSDEQRKMLDL 325
Cdd:TIGR00606 238 EIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSElelkMEKVFQGTDEQLNDLYHNHQRTVREK 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 326 WTELQRVRKQFSDLKTHTEEdLDKQKAEFT--------RAIRNVNNISRNAAFSAGAGDGLGLYGLEDGGDVNRTTNNYE 397
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRL-LNQEKTELLveqgrlqlQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFH 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 398 KVFIEtikRMNGTGGAGSASSADLLEELR-------KIRGGGSSEGDA-ELHKELMTKYEESIERNIELESRGDDSQRKI 469
Cdd:TIGR00606 397 TLVIE---RQEDEAKTAAQLCADLQSKERlkqeqadEIRDEKKGLGRTiELKKEILEKKQEELKFVIKELQQLEGSSDRI 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 470 AELEAELRRNREKL--------------------NEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTplppSEAL 529
Cdd:TIGR00606 474 LELDQELRKAERELskaeknsltetlkkevkslqNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKM----DKDE 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 530 RAVRNTFRNKDNDIQQLER--KLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLR 607
Cdd:TIGR00606 550 QIRKIKSRHSDELTSLLGYfpNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 608 ---ASEAERVAAEKARKFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTR--IDELNRRVENLLREnnr 680
Cdd:TIGR00606 630 dvcGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEaeLQEFISDLQSKLRL--- 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 681 lksevnpLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQK------- 753
Cdd:TIGR00606 707 -------APDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETllgtimp 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 754 AAHLAEQQLKEIKIQRDDYQKQKDEHARHlfdirhkleteikGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 833
Cdd:TIGR00606 780 EEESAKVCLTDVTIMERFQMELKDVERKI-------------AQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIE 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 834 ELDTTIKGHQGKITHLE---NELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENK 910
Cdd:TIGR00606 847 LNRKLIQDQQEQIQHLKsktNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 911 ELVGKEARARDAANQqlsranllnkELEDTKQDLKHSTDVNKQLEQDIRDLKER 964
Cdd:TIGR00606 927 ELISSKETSNKKAQD----------KVNDIKEKVKNIHGYMKDIENKIQDGKDD 970
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
762-1272 |
9.19e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 67.10 E-value: 9.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 762 LKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 841
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 842 HQgkithLENELHSRSgeiEKLNDLNQRLQKEKQDILnqklkldgDVQALKETIRKLENELEKLRNE-NKELVGKEARAR 920
Cdd:COG4717 128 LP-----LYQELEALE---AELAELPERLEELEERLE--------ELRELEEELEELEAELAELQEElEELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 921 DAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA----FGDRSSVADP 996
Cdd:COG4717 192 EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAAllalLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 997 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRdgrdagnrgthtitntkERIERIE-KNILDRYHDDELV 1075
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAL-----------------EELEEEElEELLAALGLPPDL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1076 EHKIREVNDRWKRELERLENEKDDLERRIR--ELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSD 1153
Cdd:COG4717 335 SPEELLELLDRIEELQELLREAEELEEELQleELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ-LEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1154 LDDEKEQYGKAVEnlksvEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQN--QKIKDEWDDFRNDADKE 1231
Cdd:COG4717 414 LLGELEELLEALD-----EEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKAELREL 488
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1767287514 1232 IQKWKTDAYTVRSEAKALE-TTNTALKAQLQAANDRIDHLTK 1272
Cdd:COG4717 489 AEEWAALKLALELLEEAREeYREERLPPVLERASEYFSRLTD 530
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1246-1450 |
1.52e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.56 E-value: 1.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1246 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHST 1325
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1326 LQSDANKWRGELDAALRE----------NDILKSNNTN--------METDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1387
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyrlgrqpplALLLSPEDFLdavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1388 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELK 1450
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1055-1355 |
1.78e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.50 E-value: 1.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1055 KERIERIEKNIldRYHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK---RK 1131
Cdd:COG1196 219 KEELKELEAEL--LLLKLRELEAELEEL----EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeeYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1132 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1211
Cdd:COG1196 293 LLAELARLEQDIARLEER-RRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1212 GQNQKIKDEWDDFRNDADKEIQkwktdaytvrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1291
Cdd:COG1196 372 AELAEAEEELEELAEELLEALR-----------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 1292 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1355
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1051-1523 |
2.11e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 2.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERIERIEKNIldryHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGN---DKTENDITE 1127
Cdd:PRK03918 171 IKEIKRRIERLEKFI----KRTENIEELIKEK----EKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1128 LKRKHAA---EIDKLKSDISALHD------KHLSDLDD------EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR 1192
Cdd:PRK03918 243 LEKELESlegSKRKLEEKIRELEErieelkKEIEELEEkvkelkELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1193 ENELEREKRDYDEK---INSLYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEAKALETTNtaLKAQLQAANDRI 1267
Cdd:PRK03918 323 INGIEERIKELEEKeerLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEK--LEKELEELEKAK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1268 DHLTKTVNDHTSKVRDLTSQVRHLED---ELADTKGN--LVQKEMDLEstqNRLRSLEDQHSTLqSDANKWRGELDAALR 1342
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEIKELKKaieELKKAKGKcpVCGRELTEE---HRKELLEEYTAEL-KRIEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1343 EndiLKSNNTNMETDLTRLKN--RLKSAEDALKELKNSLShaKTEKERLQNAFREKTKQADHLNQLASQFDT------KL 1414
Cdd:PRK03918 477 K---LRKELRELEKVLKKESEliKLKELAEQLKELEEKLK--KYNLEELEKKAEEYEKLKEKLIKLKGEIKSlkkeleKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1415 TKLRNELQDTNDKLITSDTERNALRNELQKLSQE-LKFGNEQIQRKSDEYQTTID--DLAHSHRVSEDSRLNALQELEAR 1491
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGFEsVEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKA 631
|
490 500 510
....*....|....*....|....*....|..
gi 1767287514 1492 KYEINDLTSRLDSTEQRLATLQQDYIKADSER 1523
Cdd:PRK03918 632 FEELAETEKRLEELRKELEELEKKYSEEEYEE 663
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1055-1886 |
2.13e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 66.30 E-value: 2.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1055 KERIERIekniLDRY-HDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELE---DELSQIGRGNDKTENDITELKR 1130
Cdd:pfam15921 73 KEHIERV----LEEYsHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQmerDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1131 KHAAEIDKLKSdisaLHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdyDEKINSL 1210
Cdd:pfam15921 149 NTVHELEAAKC----LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMS------TMHFRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1211 YGQNQKIKDEwddfrndADKEIQKWKTDAYTVRSEAKALET-TNTALKAQLQAANDRIDHL-----------TKTVNDHT 1278
Cdd:pfam15921 219 GSAISKILRE-------LDTEISYLKGRIFPVEDQLEALKSeSQNKIELLLQQHQDRIEQLiseheveitglTEKASSAR 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1279 SKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS--------LEDQHSTLQSDANKWRGELDAALRENDILKSN 1350
Cdd:pfam15921 292 SQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSelreakrmYEDKIEELEKQLVLANSELTEARTERDQFSQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1351 NTNMETDLTRLKNRLKSAEdalkelkNSLSHAKTEKERLQNAFREKTKQADHL-------NQLASQFDTKLTKLRNELQD 1423
Cdd:pfam15921 372 SGNLDDQLQKLLADLHKRE-------KELSLEKEQNKRLWDRDTGNSITIDHLrrelddrNMEVQRLEALLKAMKSECQG 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1424 TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDsRLNALQE----LEARKYEINDLT 1499
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSD-LTASLQEkeraIEATNAEITKLR 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1500 SRLDSTEQRLATLQQDyikADSERDILS--DALRRFQSSANRVINFhtfvdggagYVDGVPGGTSVIggGPSAQRSGAYD 1577
Cdd:pfam15921 524 SRVDLKLQELQHLKNE---GDHLRNVQTecEALKLQMAEKDKVIEI---------LRQQIENMTQLV--GQHGRTAGAMQ 589
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1578 PSSGGVIGSGISGGPGGSDFgrEIEIGRGDSDQSDVAYPRSvpfppsaDFSSGRPGAASAGGRVINNldgtttvnmnggf 1657
Cdd:pfam15921 590 VEKAQLEKEINDRRLELQEF--KILKDKKDAKIRELEARVS-------DLELEKVKLVNAGSERLRA------------- 647
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 dIANLEGTLQSLLNKIEKLEMERNELRDtlarmkkkttethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1737
Cdd:pfam15921 648 -VKDIKQERDQLLNEVKTSRNELNSLSE-----------------DYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1738 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETKMRESD 1817
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKN-------KLSQELSTVA 782
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1818 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrrdlTKAESVENELRKTIDIQ 1886
Cdd:pfam15921 783 TEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESVRLKLQHTLDVK 846
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1733-2138 |
2.15e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.20 E-value: 2.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1733 KTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETK 1812
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLK-------KNKDK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1813 MRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIdiqSKTSHE 1892
Cdd:TIGR04523 98 INKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQK---EELENE 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1893 YQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 1969
Cdd:TIGR04523 175 LNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSlesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1970 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITLL----KKIELLENEKRRTD 2044
Cdd:TIGR04523 255 LNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlNNQKEQDWNKELKSELknqeKKLEEIQNQISQNN 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2045 AAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVI 2122
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNleSQINDLESKIQNQEKLNQQKDEQI 414
|
410
....*....|....*.
gi 1767287514 2123 ENRERTHRNRIKQLED 2138
Cdd:TIGR04523 415 KKLQQEKELLEKEIER 430
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
643-1462 |
2.64e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 66.15 E-value: 2.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 643 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRI---EEKETQirySDDI 719
Cdd:pfam02463 197 LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIekeEEKLAQ---VLKE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 720 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQD 799
Cdd:pfam02463 274 NKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEK---KKAEKELKKEKEEIEELEKELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 800 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 879
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 880 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTdVNKQLEQDIR 959
Cdd:pfam02463 431 ILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERS-QKESKARSGL 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 960 DLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVAdpsrtRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRD 1039
Cdd:pfam02463 510 KVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVA-----ISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1040 GRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKdDLERRIRELEDELSQIGRGND 1119
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAK-AKESGLRKGVSLEEGLAEKSE 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1120 KTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1199
Cdd:pfam02463 664 VKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQ 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1200 KRD-----YDEKIN-SLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANdridhltkt 1273
Cdd:pfam02463 744 KIDeeeeeEEKSRLkKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA--------- 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1274 vndhtskvrdltsqvrhLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENdilksnntn 1353
Cdd:pfam02463 815 -----------------ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEEL--------- 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1354 metdltRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDT 1433
Cdd:pfam02463 869 ------LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*....
gi 1767287514 1434 ERNALRNELQKLSQELKFGNEQIQRKSDE 1462
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
439-1458 |
2.80e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 65.97 E-value: 2.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 439 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRN---REKLN----EAQGALKKLHE---MAQDSEKNVDGTV 508
Cdd:pfam01576 75 EILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEeaaRQKLQlekvTTEAKIKKLEEdilLLEDQNSKLSKER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 509 SIKRTRsLSPGKTPLPPSEALRAVRNTFRNK-DNDIQQLERKLKIAESQVKEFlnkfenaDEARRRLDKQFADAKREISN 587
Cdd:pfam01576 155 KLLEER-ISEFTSNLAEEEEKAKSLSKLKNKhEAMISDLEERLKKEEKGRQEL-------EKAKRKLEGESTDLQEQIAE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 588 LQKSVDEAERNSRRTDDKLRA-------SEAERVAAEKARKFLEDELAKLQASF--QKSSTDDARKLRDEMDEHTNSIQE 658
Cdd:pfam01576 227 LQAQIAELRAQLAKKEEELQAalarleeETAQKNNALKKIRELEAQISELQEDLesERAARNKAEKQRRDLGEELEALKT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 659 EFKTRID------ELNRRVENLLRENNR-LKSEVNPLKDKYRDLENEYNSTqrrIEEKETQIRYSDDIRRNIQKDLDDLR 731
Cdd:pfam01576 307 ELEDTLDttaaqqELRSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQA---LEELTEQLEQAKRNKANLEKAKQALE 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 732 EKYDRVHTDNEKILG---ELEHAQKAahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 808
Cdd:pfam01576 384 SENAELQAELRTLQQakqDSEHKRKK---LEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 809 DELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGD- 887
Cdd:pfam01576 461 KDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEE---EEEAKRNVERQLSTLQAQLSDMKKKLEEDa 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 888 --VQALKETIRKLENELEKLRNENKElvgkearaRDAANQQLSRA-NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKER 964
Cdd:pfam01576 538 gtLEALEEGKKRLQRELEALTQQLEE--------KAAAYDKLEKTkNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQM 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 965 LANigkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaAEDIESRGGGEIDipssgdvihgRDGRDGRDAG 1044
Cdd:pfam01576 610 LAE--------------------------------------------EKAISARYAEERD----------RAEAEAREKE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1045 NRG---THTITNTKERIERIEK-NILDRYHDDELVEHKirevNDRWK--RELER----LENEKDDLERRIRELEDELSQI 1114
Cdd:pfam01576 636 TRAlslARALEEALEAKEELERtNKQLRAEMEDLVSSK----DDVGKnvHELERskraLEQQVEEMKTQLEELEDELQAT 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1115 GRGNDKTENDITELKRKHAAEI--------DKLKSDISALHDkHLSDLDDEKEQYGKAVENLKSVEDDLRDklnnLEKQL 1186
Cdd:pfam01576 712 EDAKLRLEVNMQALKAQFERDLqardeqgeEKRRQLVKQVRE-LEAELEDERKQRAQAVAAKKKLELDLKE----LEAQI 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1187 -ADSLNRENELEREKRdydekinsLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS-EAKAL---ETTNTALKAQLQ 1261
Cdd:pfam01576 787 dAANKGREEAVKQLKK--------LQAQMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLqlqEDLAASERARRQ 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1262 AANDRiDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ-------SDANKWR 1334
Cdd:pfam01576 859 AQQER-DELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTtelaaerSTSQKSE 937
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1335 GELDAALRENDILKSNNTNME-TDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK-------QADHLNQL 1406
Cdd:pfam01576 938 SARQQLERQNKELKAKLQEMEgTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKklkevllQVEDERRH 1017
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1407 ASQFDTKLTKLRNELQDTNDKLITSDTER---NALRNELQKLSQELKFGNEQIQR 1458
Cdd:pfam01576 1018 ADQYKDQAEKGNSRMKQLKRQLEEAEEEAsraNAARRKLQRELDDATESNESMNR 1072
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
541-1513 |
3.29e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 66.23 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFLNKFEnadEARRRLDKQFADAKREISNLQKSVDEAERNSrrTDDKLRASEAERVAAEKAR 620
Cdd:TIGR01612 1111 DEINKIKDDIKNLDQKIDHHIKALE---EIKKKSENYIDEIKAQINDLEDVADKAISND--DPEEIEKKIENIVTKIDKK 1185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 621 KFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 698
Cdd:TIGR01612 1186 KNIYDEIKKLLNEIAEIEKDKTslEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENE 1265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 699 YNSTQRRIEEKET-QIRYSDD-----IRRNIQKDLDDLREKYDRVHTDNEK------ILGELE----HAQKAAHLAEQQL 762
Cdd:TIGR01612 1266 MGIEMDIKAEMETfNISHDDDkdhhiISKKHDENISDIREKSLKIIEDFSEesdindIKKELQknllDAQKHNSDINLYL 1345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 763 KEIKiqrDDYQKQKDEHARHLFDIRHKLETEIkgrqdlEKNGARNNDELDKLRQTISDYESQINlLRRHNDELDTTIKGH 842
Cdd:TIGR01612 1346 NEIA---NIYNILKLNKIKKIIDEVKEYTKEI------EENNKNIKDELDKSEKLIKKIKDDIN-LEECKSKIESTLDDK 1415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 843 Q-----GKITHLENELHSRSG---------------------EIEKLNDLNQRLQKEKQDilNQKLKLDGDVQALKETIR 896
Cdd:TIGR01612 1416 DideciKKIKELKNHILSEESnidtyfknadennenvlllfkNIEMADNKSQHILKIKKD--NATNDHDFNINELKEHID 1493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 897 KlENELEKLRNENKELVGKEARARDAANQQLSRanLLNKELE-DTKQDLKHSTDVNKQLEQDIRDLKERL-----ANIGK 970
Cdd:TIGR01612 1494 K-SKGCKDEADKNAKAIEKNKELFEQYKKDVTE--LLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFileaeKSEQK 1570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 971 GGRISRDSTTGTDGGAFGDRSSVAdpsrtrgaagstvfvpaaediesrgggEIDIPSSGDVIHGRDGRdgrdagnrgtht 1050
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKA---------------------------AIDIQLSLENFENKFLK------------ 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERI-------ERIEKNILDRYHDDELVEHKIREVNDRWKRE-LERLENEKDDLERRIRELEDELSQIgrgnDKTE 1122
Cdd:TIGR01612 1612 ISDIKKKIndclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEI----EKIE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1123 NDITELKRKHAAEI-DKLKSDISALHDKhlsdLDDEKEQYGKAVENLKSVED-------DLRDKLNNLEKQLADSLNREN 1194
Cdd:TIGR01612 1688 IDVDQHKKNYEIGIiEKIKEIAIANKEE----IESIKELIEPTIENLISSFNtndlegiDPNEKLEEYNTEIGDIYEEFI 1763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1195 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQ-KWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT 1273
Cdd:TIGR01612 1764 ELYNIIAGCLETVSKEPITYDEIKNTRINAQNEFLKIIEiEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSK 1843
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1274 VNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALREN--------- 1344
Cdd:TIGR01612 1844 INEGFDDISKSIENVKNSTDENLLFDILNKTKDAYAGIIGKKYYSYKDEAEKIFINISKLANSINIQIQNNsgidlfdni 1923
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1345 --DILKSNNTNMETDLTRLKNRLKSAE----------DALKELKNSLSHAKTEKERLQNAFR-----EKTKQADHLNQLA 1407
Cdd:TIGR01612 1924 niAILSSLDSEKEDTLKFIPSPEKEPEiytkirdsydTLLDIFKKSQDLHKKEQDTLNIIFEnqqlyEKIQASNELKDTL 2003
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1408 SQFDTKLTKLRNELQdtndKLITSDTERNALRNELQKLSQELKFGN-EQIQRKSDEYQTTIDDLAHSHRVS--EDSRLNA 1484
Cdd:TIGR01612 2004 SDLKYKKEKILNDVK----LLLHKFDELNKLSCDSQNYDTILELSKqDKIKEKIDNYEKEKEKFGIDFDVKamEEKFDND 2079
|
1050 1060 1070
....*....|....*....|....*....|..
gi 1767287514 1485 LQELEarKYEINDLTSRL---DSTEQRLATLQ 1513
Cdd:TIGR01612 2080 IKDIE--KFENNYKHSEKdnhDFSEEKDNIIQ 2109
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1663-2148 |
4.35e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.04 E-value: 4.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1663 EGTLQSLLNKIEKLEMERNELRDTLarmkkktTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1742
Cdd:TIGR04523 67 EEKINNSNNKIKILEQQIKDLNDKL-------KKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1743 LKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKmresDSDTNK 1822
Cdd:TIGR04523 140 IDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1823 YQLQIASFESERQILTEKIKELdgalrlsdskvqdmkddTDKLRRDLTKAESVENELRKTIDIQSKTsheyqllKDQLLN 1902
Cdd:TIGR04523 216 LESQISELKKQNNQLKDNIEKK-----------------QQEINEKTTEISNTQTQLNQLKDEQNKI-------KKQLSE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1903 TQNELNGANNRKQQLENELLNVRSEVRDYKQR------------VHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVV 1970
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQkeqdwnkelkseLKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKEL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1971 NTMRTTETDLRQQL-------ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS-------DGWKKEKITLLKKIELL 2036
Cdd:TIGR04523 352 TNSESENSEKQRELeekqneiEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNqqkdeqiKKLQQEKELLEKEIERL 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2037 ENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNcaqlqQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKG 2116
Cdd:TIGR04523 432 KETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ-----LKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKK 506
|
490 500 510
....*....|....*....|....*....|....*
gi 1767287514 2117 QIE---KVIENRERTHRNRIKQLEDQIAILRDQLD 2148
Cdd:TIGR04523 507 ELEekvKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
422-903 |
4.52e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.09 E-value: 4.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 422 LEELRKIRGGGSS-EGDAELHKELMTKYEESIE--RNIE-----LESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL 493
Cdd:PRK03918 275 IEELEEKVKELKElKEKAEEYIKLSEFYEEYLDelREIEkrlsrLEEEINGIEERIKELEEKEERLEELKKKLKELEKRL 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 494 HEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPPSEalravrntfrnkdndiqqLERKLKIAESQVKEFLNKFENADEARRR 573
Cdd:PRK03918 355 EELEERHELYEEAKAKKEELERLKKRLTGLTPEK------------------LEKELEELEKAKEEIEEEISKITARIGE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 574 LDKQFADAKREISNLQKS----------VDEAERNS--RRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD 641
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAkgkcpvcgreLTEEHRKEllEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 A-RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEnEYNSTQRRIEEKEtqirysDDIR 720
Cdd:PRK03918 497 KlKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAELEKKL------DELE 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 721 RNIQKDLDDLREKYDRVHTDNEKILGELE-------HAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRhKLETE 793
Cdd:PRK03918 570 EELAELLKELEELGFESVEELEERLKELEpfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLE-ELRKE 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 794 IK--GRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgkitHLENELHSRSGEIEKLNDLNQRLQ 871
Cdd:PRK03918 649 LEelEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE-------KLKEELEEREKAKKELEKLEKALE 721
|
490 500 510
....*....|....*....|....*....|..
gi 1767287514 872 kekqdilnqklkldgDVQALKETIRKLENELE 903
Cdd:PRK03918 722 ---------------RVEELREKVKKYKALLK 738
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1089-1541 |
5.26e-10 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 64.71 E-value: 5.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRELEDELSQigrgndktendITELKRKHAAEIDKLKSDISALHD---------KHLSDLDDEKE 1159
Cdd:pfam05622 1 DLSEAQEEKDELAQRCHELDQQVSL-----------LQEEKNSLQQENKKLQERLDQLESgddsgtpggKKYLLLQKQLE 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1160 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdydekinSLYGQNQKIKDEWDDFRNDADKeIQKWKTda 1239
Cdd:pfam05622 70 QLQEENFRLETARDDYRIKCEELEKEVLELQHRNEELT-----------SLAEEAQALKDEMDILRESSDK-VKKLEA-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1240 yTVRSEAKALETTNTaLKAQLQAANDR-IDHLTKTVN--DHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1316
Cdd:pfam05622 136 -TVETYKKKLEDLGD-LRRQVKLLEERnAEYMQRTLQleEELKKANALRGQLETYKRQVQELHGKLSEESKKADKLEFEY 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1317 RSLEDQHSTLQSDANKWRGELDaALREndilksnnTNMETDLTRLKNRLKSAEDALKElKNSLSHAKTEKERLQNAFREK 1396
Cdd:pfam05622 214 KKLEEKLEALQKEKERLIIERD-TLRE--------TNEELRCAQLQQAELSQADALLS-PSSDPGDNLAAEIMPAEIREK 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1397 TKQADHLNQL-----ASQFDTKLTKLRNELQDTNDKLITSDTErnaLRNELQKLSqELKFGNEQIQRKSDEYQTTIDDLA 1471
Cdd:pfam05622 284 LIRLQHENKMlrlgqEGSYRERLTELQQLLEDANRRKNELETQ---NRLANQRIL-ELQQQVEELQKALQEQGSKAEDSS 359
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 1472 HSHRVSE---DSRLNALQELEARKYEINDLTSRLDS-TEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1541
Cdd:pfam05622 360 LLKQKLEehlEKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKDEDMKAMEERYKKYVEKAKSVI 433
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
541-755 |
9.57e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 62.86 E-value: 9.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKAR 620
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 621 KFLEDELAKLQASFQKSSTDDARKLR---------DEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 691
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLlspedfldaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 692 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAA 755
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
462-723 |
1.13e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.17 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 462 GDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvSIKRTRSLSPGKTPLPPSEA----LRAVRNTFR 537
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERRE---ALQRLAEYSWDEIDVASAEReiaeLEAELERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 538 NKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD----DKLRASEAER 613
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELrallEERFAAALGD 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 614 VAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENL---LRENNRLKSEVNP-LK 689
Cdd:COG4913 762 AVERELRENLEERIDALRA--------RLNRAEEELERAMRAFNREWPAETADLDADLESLpeyLALLDRLEEDGLPeYE 833
|
250 260 270
....*....|....*....|....*....|....*
gi 1767287514 690 DKYRDLENEynSTQRRIEEKETQIRYS-DDIRRNI 723
Cdd:COG4913 834 ERFKELLNE--NSIEFVADLLSKLRRAiREIKERI 866
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
529-968 |
1.18e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 63.91 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 529 LRAVRNTFRNKDNDIQQLERK--------LKIAESQVKEFLNKFE-NADEARRRLDK-------------QFADAKREIS 586
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdlherlngLESELAELDEEIERYEeQREQARETRDEadevleeheerreELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 587 NLQKSVDEAERnsRRTDDKLRASEAERVAAEkarkfLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQ---EEFK 661
Cdd:PRK02224 262 DLRETIAETER--EREELAEEVRDLRERLEE-----LEEERDDLLAEagLDDADAEAVEARREELEDRDEELRdrlEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 662 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIR--------------YSDDIRRNIQKDL 727
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEeleeeieelrerfgDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 728 DDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR--------------DDYQKQKDEHARHLFDIRHKLET- 792
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEALLEAGKCPEcgqpvegsphvetiEEDRERVEELEAELEDLEEEVEEv 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 793 ------------EIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKIThlenELHSRSGEI 860
Cdd:PRK02224 495 eerleraedlveAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAA----EAEEEAEEA 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 861 -EKLNDLNQRLQKekqdiLNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE--- 936
Cdd:PRK02224 571 rEEVAELNSKLAE-----LKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEfde 645
|
490 500 510
....*....|....*....|....*....|....
gi 1767287514 937 --LEDTKQDLKHSTDVNKQLEQDIRDLKERLANI 968
Cdd:PRK02224 646 arIEEAREDKERAEEYLEQVEEKLDELREERDDL 679
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
457-970 |
1.26e-09 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 63.77 E-value: 1.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 457 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEK-NVDGTVSIKRTRSLSPGKTPLPPSE-------- 527
Cdd:PRK01156 208 DDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRyESEIKTAESDLSMELEKNNYYKELEerhmkiin 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 528 -ALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRTD 603
Cdd:PRK01156 288 dPVYKNRNYINDYFKYKNDIENKKQILSN-IDAEINKYHAIIKKLSVLQKdynDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 604 DKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDdARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKS 683
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEID-PDAIKKELNEINVKLQD-ISSKVSSLNQRIRALRENLDELSR 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 684 EVNPLK--------------DKYRDLENEYNSTQRRIEEK----ETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIL 745
Cdd:PRK01156 445 NMEMLNgqsvcpvcgttlgeEKSNHIINHYNEKKSRLEEKireiEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKI 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 746 GELEHAQKAAhlaEQQLKEIKIQRDDYQKQKDEH-ARHLFDIRHKLETEIKGrqdlekNGARNNDELDKLRQTISDYESQ 824
Cdd:PRK01156 525 ESARADLEDI---KIKINELKDKHDKYEEIKNRYkSLKLEDLDSKRTSWLNA------LAVISLIDIETNRSRSNEIKKQ 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 825 INLLRRHNDELDTTIKghqgkithlenelhsrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 904
Cdd:PRK01156 596 LNDLESRLQEIEIGFP------------------DDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKK 657
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 905 LRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 970
Cdd:PRK01156 658 QIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINE 723
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1663-2068 |
1.41e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 63.25 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1663 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKET--RYRNIEDNLQDAEEERRALESRLQSAKTLLRSQE 1740
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1741 EALKQRDEERRQMKSKMVAAELQargKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1820
Cdd:COG4717 167 ELEAELAELQEELEELLEQLSLA---TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1821 NKYQLQ--------IASFESERQILTEKIKELDGAL---------------RLSDSKVQDMKDDTDKLRRDLTKAESVEN 1877
Cdd:COG4717 244 RLKEARlllliaaaLLALLGLGGSLLSLILTIAGVLflvlgllallflllaREKASLGKEAEELQALPALEELEEEELEE 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1878 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE--------NELLN---------VRSEVRDYKQRvHDVNN 1940
Cdd:COG4717 324 LLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqeiAALLAeagvedeeeLRAALEQAEEY-QELKE 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1941 RVSELQRQLQDANTEKNRVEDRFlsvekvvntmrtTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssQLSD 2020
Cdd:COG4717 403 ELEELEEQLEELLGELEELLEAL------------DEEELEEELEELEEELEELEEELEELREELAELEAELE---QLEE 467
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1767287514 2021 GWKKEKitLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREN 2068
Cdd:COG4717 468 DGELAE--LLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1658-2147 |
1.66e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.54 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEME-------RNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1730
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQkqilrerLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1731 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfqlE 1810
Cdd:TIGR02168 362 ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE---------E 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1811 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqskts 1890
Cdd:TIGR02168 433 AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG--------- 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1891 heYQLLKDQLLNTQNELNGANNRKQQL-------ENELLNVRSEVRDY--------------------KQRVH------- 1936
Cdd:TIGR02168 504 --FSEGVKALLKNQSGLSGILGVLSELisvdegyEAAIEAALGGRLQAvvvenlnaakkaiaflkqneLGRVTflpldsi 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1937 ---DVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTT---ETDLRQQLETAKNEK---RVATKELEDLKRRLAQ 2007
Cdd:TIGR02168 582 kgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGvlvVDDLDNALELAKKLRpgyRIVTLDGDLVRPGGVI 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2008 L-ENERRNSSQLSDgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE-------KSLNAMERENKELYKNCAQLQ 2079
Cdd:TIGR02168 662 TgGSAKTNSSILER--RREIEELEEKIEELEEKIAELEKALAELRKELEELEeeleqlrKELEELSRQISALRKDLARLE 739
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 2080 QQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVIENRER---THRNRIKQLEDQIAILRDQL 2147
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTEleAEIEELEERLEEAEEELAEAEAEIEELEAqieQLKEELKALREALDELRAEL 812
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1725-2147 |
2.14e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 63.14 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1725 LESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRslrDKEEQWDS 1804
Cdd:TIGR00606 700 LQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIE---EQETLLGT 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1805 SRFQLETKMRESDSDTNKYQLQIASFESERQIlTEKIKELDGA-LRLSDSKVQDMKDDTD-KLRRDLTKAEsvenELRKT 1882
Cdd:TIGR00606 777 IMPEEESAKVCLTDVTIMERFQMELKDVERKI-AQQAAKLQGSdLDRTVQQVNQEKQEKQhELDTVVSKIE----LNRKL 851
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1883 IDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvedr 1962
Cdd:TIGR00606 852 IQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK------ 925
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1963 flsvEKVVNTMRTtetdlrqqletaknEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITllkkielLENEKR 2041
Cdd:TIGR00606 926 ----EELISSKET--------------SNKKAQDKVNDIKEKVKNIHGYMKDiENKIQDGKDDYLKQ-------KETELN 980
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2042 RTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQ--ERQLIRMRQEKGQIE 2119
Cdd:TIGR00606 981 TVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEmgQMQVLQMKQEHQKLE 1060
|
410 420 430
....*....|....*....|....*....|.
gi 1767287514 2120 KVIENRERTHR---NRIKQLEDQIAILRDQL 2147
Cdd:TIGR00606 1061 ENIDLIKRNHVlalGRQKGYEKEIKHFKKEL 1091
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
541-943 |
4.85e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 61.71 E-value: 4.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFlnkfENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAE--- 617
Cdd:COG4717 71 KELKELEEELKEAEEKEEEY----AELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAElpe 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 618 ---------KARKFLEDELAKLQASFQKSSTDdARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPL 688
Cdd:COG4717 147 rleeleerlEELRELEEELEELEAELAELQEE-LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEEL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 689 KDKYRDLENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLREKYDRVHTDNEKILG 746
Cdd:COG4717 226 EEELEQLENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLFLLLAREKASLGKEAE 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 747 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEK-----------------NGARNND 809
Cdd:COG4717 306 ELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEelqleeleqeiaallaeAGVEDEE 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDKLRQTISDYESQINLLRRHNDELDTTIKG-----HQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKL 884
Cdd:COG4717 386 ELRAALEQAEEYQELKEELEELEEQLEELLGEleellEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 885 DGDvqalkETIRKLENELEKLRNENKELVgKEARARDAANQQLSRAnllNKELEDTKQD 943
Cdd:COG4717 466 EED-----GELAELLQELEELKAELRELA-EEWAALKLALELLEEA---REEYREERLP 515
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
707-1511 |
5.84e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.85 E-value: 5.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 707 EEKETQirysDDIRRnIQKDLDDLREKYDRVHTDNEKI--LGEL-EHAQKAAHlAEQQLKEIKIQRDDYQKQKDEHARHL 783
Cdd:COG4913 219 EEPDTF----EAADA-LVEHFDDLERAHEALEDAREQIelLEPIrELAERYAA-ARERLAELEYLRAALRLWFAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 784 fdirhkLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-KITHLENELhsrsgeiek 862
Cdd:COG4913 293 ------LEAEL----------EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGdRLEQLEREI--------- 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 863 lndlnQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANllnKELEDTKQ 942
Cdd:COG4913 348 -----ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE---AALRDLRR 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 943 DLKhstdvnkQLEQDIRDLKERLANIGKGGRISRDsttgtdggafgdrssvadpsRTRGAAGSTvfvpaaediesrgggE 1022
Cdd:COG4913 420 ELR-------ELEAEIASLERRKSNIPARLLALRD--------------------ALAEALGLD---------------E 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1023 IDIPSSGDVIHGRDG-RDGRDAGNRGTHTITNT---KERIERIEKNILDRYHDDE-LVEHKIREVNdrwkRELERLENEK 1097
Cdd:COG4913 458 AELPFVGELIEVRPEeERWRGAIERVLGGFALTllvPPEHYAAALRWVNRLHLRGrLVYERVRTGL----PDPERPRLDP 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1098 DDLERRI--------RELEDELSQigRGNDKTENDITELKR-KHAAEIDKLKSDISALHDKhlsdlDDEKEQYGKAV--- 1165
Cdd:COG4913 534 DSLAGKLdfkphpfrAWLEAELGR--RFDYVCVDSPEELRRhPRAITRAGQVKGNGTRHEK-----DDRRRIRSRYVlgf 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1166 ENlksveddlRDKLNNLEKQLAdslnrenELEREKRDYDEKINSL---YGQNQKIKDEWDDFRNDADKEIqkwktDAYTV 1242
Cdd:COG4913 607 DN--------RAKLAALEAELA-------ELEEELAEAEERLEALeaeLDALQERREALQRLAEYSWDEI-----DVASA 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1243 RSEAKALEttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED- 1321
Cdd:COG4913 667 EREIAELE----AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDl 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1322 QHSTLQSDANKWRGELDAALRENDILKsnntNMETDLTRLKNRLKSAEDALkelknslshaktekERLQNAFREKTK--Q 1399
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRE----NLEERIDALRARLNRAEEEL--------------ERAMRAFNREWPaeT 804
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1400 ADHLNQLAS--QFDTKLTKLRNE------------LQDTNDKLITS-----DTERNALRNELQKLSQELK---FGNE--- 1454
Cdd:COG4913 805 ADLDADLESlpEYLALLDRLEEDglpeyeerfkelLNENSIEFVADllsklRRAIREIKERIDPLNDSLKripFGPGryl 884
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1455 QI---QRKSDEYQTTIDDLahsHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLAT 1511
Cdd:COG4913 885 RLearPRPDPEVREFRQEL---RAVTSGASLFDEELSEARFAALKRLIERLRSEEEESDR 941
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
449-968 |
6.17e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 61.67 E-value: 6.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 449 EESIERNIELESRG-DDSQRKIAELEAELRRNREKLNEAQGALK-KLHEMAQDSeknvDGTVSIKRTRSLSPG------K 520
Cdd:pfam15921 73 KEHIERVLEEYSHQvKDLQRRLNESNELHEKQKFYLRQSVIDLQtKLQEMQMER----DAMADIRRRESQSQEdlrnqlQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 521 TPLPPSEALRAVR-NTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFADAKREISNLQKSVDEAern 598
Cdd:pfam15921 149 NTVHELEAAKCLKeDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASgKKIYEHDSMSTMHFRSLGSAISKI--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 599 srrtddkLRASEAErVAAEKARKF-LEDELAKLQASFQ-------KSSTDDARKLRDEMD--------------EHTNSI 656
Cdd:pfam15921 226 -------LRELDTE-ISYLKGRIFpVEDQLEALKSESQnkielllQQHQDRIEQLISEHEveitgltekassarSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 657 QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYnstQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDR 736
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMY---EDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 737 VHTDNEKILGELEHAQKAAHLAEQQLKEIkIQRDDYQKQKDEHARHLFDIRH-----------KLETEIKGRQDLEKNGA 805
Cdd:pfam15921 375 LDDQLQKLLADLHKREKELSLEKEQNKRL-WDRDTGNSITIDHLRRELDDRNmevqrleallkAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 806 R-NNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLN----DLNQRLQKEKQDI 877
Cdd:pfam15921 454 QgKNESLEKVSSLTAQLESTKEMLRKVVEELTAkkmTLESSERTVSDLTASLQEKERAIEATNaeitKLRSRVDLKLQEL 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 878 lnQKLKLDGD--------VQALKETIRKLENELEKLRN--EN-KELVGKEARArdAANQQLSRANLlNKELEDTKQDLKH 946
Cdd:pfam15921 534 --QHLKNEGDhlrnvqteCEALKLQMAEKDKVIEILRQqiENmTQLVGQHGRT--AGAMQVEKAQL-EKEINDRRLELQE 608
|
570 580
....*....|....*....|..
gi 1767287514 947 STDVNKQLEQDIRDLKERLANI 968
Cdd:pfam15921 609 FKILKDKKDAKIRELEARVSDL 630
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1078-1536 |
6.32e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 61.32 E-value: 6.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1078 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHD-KHLSDLDD 1156
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE----ELEKLEKLLQLLPLyQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1157 EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1236
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1237 TDAYTVRSEAKALETTNTALKAQ--------LQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMD 1308
Cdd:COG4717 220 EELEELEEELEQLENELEAAALEerlkearlLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKAS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1309 LESTQNRLRSLEDQHSTLQSDANKWRGELDAalrENDILKSNNTNMETDLTRLKNRLKSAEDALKELKnsLSHAKTEKER 1388
Cdd:COG4717 300 LGKEAEELQALPALEELEEEELEELLAALGL---PPDLSPEELLELLDRIEELQELLREAEELEEELQ--LEELEQEIAA 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1389 LQN--------AFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERnaLRNELQKLSQELKFGNEQIQRKS 1460
Cdd:COG4717 375 LLAeagvedeeELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEE--LEEELEELEEELEELEEELEELR 452
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1461 DEYQTT---IDDLAHSHRVSEdsrlnALQELEARKyeindltsrldsteQRLATLQQDYIKADSERDILSDALRRFQSS 1536
Cdd:COG4717 453 EELAELeaeLEQLEEDGELAE-----LLQELEELK--------------AELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1703-2067 |
6.82e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 61.32 E-value: 6.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1703 QKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKskmvaaelqargKEAQLRHLNEQLKNLR 1782
Cdd:COG4717 85 EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA------------LEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1783 TDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDT 1862
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1863 DKLRRDLTKAESVEN------------------------------------------ELRKTIDIQSKTSHEYQLLKDQL 1900
Cdd:COG4717 230 EQLENELEAAALEERlkearlllliaaallallglggsllsliltiagvlflvlgllALLFLLLAREKASLGKEAEELQA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1901 LNTQNELNGA--NNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVE-DRFLSVEKVvntmrTTE 1977
Cdd:COG4717 310 LPALEELEEEelEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEiAALLAEAGV-----EDE 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1978 TDLRQQLEtAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD--GWKKEKITLLKKIELLENEKRRTDAAIRETALQRE 2055
Cdd:COG4717 385 EELRAALE-QAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAELE 463
|
410
....*....|..
gi 1767287514 2056 AIEKSLNAMERE 2067
Cdd:COG4717 464 QLEEDGELAELL 475
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1670-2146 |
6.88e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.19 E-value: 6.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1670 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSaktllrsqeeaLKQRDEE 1749
Cdd:TIGR04523 144 LTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN-----------LKKKIQK 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1750 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdsSRFQLETKMRESDSDTNKyqlqIAS 1829
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNK---IKKQLSEKQKELEQNNKK----IKE 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1830 FESERQILTEKIKELDgalrlsDSKVQD-MKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1908
Cdd:TIGR04523 286 LEKQLNQLKSEISDLN------NQKEQDwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENS 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1909 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQ-----------------------------------DAN 1953
Cdd:TIGR04523 360 EKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQnqeklnqqkdeqikklqqekellekeierlketiiKNN 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1954 TEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ-------LENERRNSSQLSDGWKKEK 2026
Cdd:TIGR04523 440 SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSkekelkkLNEEKKELEEKVKDLTKKI 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2027 ITLLKKIELLENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQER 2106
Cdd:TIGR04523 520 SSLKEKIEKLESEKKEKESKISD-------LEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1767287514 2107 QLirmRQEKGQIEKVIENRERThrnrIKQLEDQIAILRDQ 2146
Cdd:TIGR04523 593 QK---EKEKKDLIKEIEEKEKK----ISSLEKELEKAKKE 625
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1898-2169 |
7.40e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.16 E-value: 7.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTE 1977
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE-------LAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1978 TDLRQQLETAKnekrvatkelEDLKRRLAQLENERRNSsqlsdgwkkekitllkKIELLENEKRRTDAAIRETALQR--E 2055
Cdd:COG4942 93 AELRAELEAQK----------EELAELLRALYRLGRQP----------------PLALLLSPEDFLDAVRRLQYLKYlaP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2056 AIEKSLNAMERENKELykncaqlqqQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2135
Cdd:COG4942 147 ARREQAEELRADLAEL---------AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
250 260 270
....*....|....*....|....*....|....
gi 1767287514 2136 LEDQIAILRDQLDGERRRRREYVDRSMVNDIGRL 2169
Cdd:COG4942 218 LQQEAEELEALIARLEAEAAAAAERTPAAGFAAL 251
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
541-968 |
1.09e-08 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 60.25 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 620
Cdd:pfam06160 86 KALDEIEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTL-----------------LANRFSYGPAI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 621 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNSIQEEFKtRIDELNRRVENLlrennrLKSEVNPLKDKYR 693
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEEltesgdyLEAREVLEKLEEETDALEELME-DIPPLYEELKTE------LPDQLEELKEGYR 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 694 DLENE-YNSTQRRIEEKETQIRysDDIRRNIQK----DLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQ 768
Cdd:pfam06160 222 EMEEEgYALEHLNVDKEIQQLE--EQLEENLALlenlELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 769 RDDYQKQKDEharhlfdirhkLETEIkgrQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITH 848
Cdd:pfam06160 300 LEHAEEQNKE-----------LKEEL---ERVQQSYTLNENELERVRG----LEKQLEELEKRYDEIVERLEEKEVAYSE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 849 LENELhsrsgeIEKLNDLNQrLQKEKQDILNQKLKLDGDVQALKETIRKLENELE--KLRNENKELVGKEARARDAANQQ 926
Cdd:pfam06160 362 LQEEL------EEILEQLEE-IEEEQEEFKESLQSLRKDELEAREKLDEFKLELReiKRLVEKSNLPGLPESYLDYFFDV 434
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1767287514 927 LSRANLLNKELEDTKQDLKhstDVNKQLE---QDIRDLKERLANI 968
Cdd:pfam06160 435 SDEIEDLADELNEVPLNMD---EVNRLLDeaqDDVDTLYEKTEEL 476
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
438-1515 |
1.17e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 60.84 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 438 AELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLS 517
Cdd:TIGR01612 747 GEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIK 826
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 518 PGKTPLPPSEaLRAVRNTFRNKDNDIQQLE----RKLKIAESQVKEFLNKFEN--ADEARRRLDKQFADAKREISNLQKS 591
Cdd:TIGR01612 827 EDEIFKIINE-MKFMKDDFLNKVDKFINFEnnckEKIDSEHEQFAELTNKIKAeiSDDKLNDYEKKFNDSKSLINEINKS 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 592 VDEAERNS---RRTDDKLRASEAERVAAEKarkfledelaklqasFQKSSTDDARKLRDEMD--EHTNSIQEEFKTRIDe 666
Cdd:TIGR01612 906 IEEEYQNIntlKKVDEYIKICENTKESIEK---------------FHNKQNILKEILNKNIDtiKESNLIEKSYKDKFD- 969
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 667 lnrrvenllrenNRLKSEVNPLKDKYRDLE-NEYNSTQRRIeeketqIRYSDDIRRNIQKDLDD-LREKYDrvhtDNEKI 744
Cdd:TIGR01612 970 ------------NTLIDKINELDKAFKDASlNDYEAKNNEL------IKYFNDLKANLGKNKENmLYHQFD----EKEKA 1027
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 745 LGELEhaqkaahlaeqqlkeikiqrddyqkQKDEHA-RHLFDIRHKLETEIKG-RQDLEKNGARNNDELDKlrqtisdye 822
Cdd:TIGR01612 1028 TNDIE-------------------------QKIEDAnKNIPNIEIAIHTSIYNiIDEIEKEIGKNIELLNK--------- 1073
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 sqiNLLRRHNDELdTTIKGHQGKITHLENELHSRSGEIEKLNDLNqrlqKEKQDILNQKLKLDGDVQALKETIRKLENEL 902
Cdd:TIGR01612 1074 ---EILEEAEINI-TNFNEIKEKLKHYNFDDFGKEENIKYADEIN----KIKDDIKNLDQKIDHHIKALEEIKKKSENYI 1145
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 903 EKLRNENKELvgkearaRDAANQQLSRANLlnKELEDTKQDLKHSTDVNKQLEQDIRDLKERLAnigkggRISRDSTTgt 982
Cdd:TIGR01612 1146 DEIKAQINDL-------EDVADKAISNDDP--EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIA------EIEKDKTS-- 1208
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 983 dggafgdRSSVADPSRTRGAAGSTVFVPAAEdiESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTItntkERIERIE 1062
Cdd:TIGR01612 1209 -------LEEVKGINLSYGKNLGKLFLEKID--EEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGI----EMDIKAE 1275
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1063 KNILDRYHDDELVEHKIREVNDrwkrelerlENEKDDLERRIRELED--ELSQIGRGNDKTENDITElKRKHAAEIDKLK 1140
Cdd:TIGR01612 1276 METFNISHDDDKDHHIISKKHD---------ENISDIREKSLKIIEDfsEESDINDIKKELQKNLLD-AQKHNSDINLYL 1345
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1141 SDISALHD----KHLSDLDDEKEQYGKAVE-NLKSVEDDLrDKLNNLEKQLADSLNRENelerekrdydekinslygQNQ 1215
Cdd:TIGR01612 1346 NEIANIYNilklNKIKKIIDEVKEYTKEIEeNNKNIKDEL-DKSEKLIKKIKDDINLEE------------------CKS 1406
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1216 KIKDEWDDfrNDADKEIQKWKTDAYTVRSEakalETTNTALKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhledEL 1295
Cdd:TIGR01612 1407 KIESTLDD--KDIDECIKKIKELKNHILSE----ESNIDTYFKNADENNENVLLLFKNI-------------------EM 1461
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1296 ADTKGNLVQKEM------DLESTQNRLRSLEDQHSTLQSDANKWRgeldAALRENDILKSnntNMETDLTRLKNRLKSAe 1369
Cdd:TIGR01612 1462 ADNKSQHILKIKkdnatnDHDFNINELKEHIDKSKGCKDEADKNA----KAIEKNKELFE---QYKKDVTELLNKYSAL- 1533
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1370 dalkELKNSLSHAKTEKERLQNAFREKTKQadhLNQLASQFDTKLTKLRNE---LQD-------TNDKLITSDTERNALR 1439
Cdd:TIGR01612 1534 ----AIKNKFAKTKKDSEIIIKEIKDAHKK---FILEAEKSEQKIKEIKKEkfrIEDdaakndkSNKAAIDIQLSLENFE 1606
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1440 NELQKLSQELKFGN------EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNA-LQELEARKYEINDLTSRLDSTEQRLATL 1512
Cdd:TIGR01612 1607 NKFLKISDIKKKINdclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEIEKI 1686
|
...
gi 1767287514 1513 QQD 1515
Cdd:TIGR01612 1687 EID 1689
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
785-969 |
1.26e-08 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 60.26 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 785 DIRHKLETEIKGRQDLEKngARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlENELHSRSGEIEKLN 864
Cdd:COG2433 384 ELIEKELPEEEPEAEREK--EHEERELTEEEEEIRRLEEQVERLEAEVEEL--------------EAELEEKDERIERLE 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 865 DlnqRLQKEKQDIlNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQD 943
Cdd:COG2433 448 R---ELSEARSEE-RREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKELWKLEHSGELVPVKVVEKfTKEA 523
|
170 180 190
....*....|....*....|....*....|....*.
gi 1767287514 944 LKHSTDVNKQLEQDI----------RDLKERLANIG 969
Cdd:COG2433 524 IRRLEEEYGLKEGDVvylrdasgagRSTAELLAEAG 559
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
527-1168 |
1.27e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.70 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 527 EALRAVRNTFRnkdnDIQQLERKLKIAESQVK---EFLNKFENADEARRRLDK-QFADAKREISNLQKSVDEAERNSRRT 602
Cdd:COG4913 225 EAADALVEHFD----DLERAHEALEDAREQIEllePIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 603 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD-----------------ARKLRDEMDEHTNSI--------- 656
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDRleqlereierlereleeRERRRARLEALLAALglplpasae 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 657 -----QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR---IEEKETQIRysDDIRRNIQKDLD 728
Cdd:COG4913 381 efaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRksnIPARLLALR--DALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 729 DL---------REKYDRVHTDNEKILG--------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIR---H 788
Cdd:COG4913 459 ELpfvgelievRPEEERWRGAIERVLGgfaltllvPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDslaG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 789 KLET-----------EIKGRQDLEKngARNNDELDKLRQTISDyESQI-NLLRRHndELDTTIKGHQG---------KIT 847
Cdd:COG4913 539 KLDFkphpfrawleaELGRRFDYVC--VDSPEELRRHPRAITR-AGQVkGNGTRH--EKDDRRRIRSRyvlgfdnraKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 848 HLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDG---------DVQALKETIRKLENELEKLRNENKELvgkear 918
Cdd:COG4913 614 ALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaeyswdeiDVASAEREIAELEAELERLDASSDDL------ 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 919 arDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSR 998
Cdd:COG4913 688 --AALEEQLEE---LEAELEELEEEL-------DELKGEIGRLEKELEQA---------------------EEELDELQD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 999 TRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihGRDGRDGRDAGNRgthTITNTKERIERIEKNILDRYHD------- 1071
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVEREL--RENLEERIDALRA---RLNRAEEELERAMRAFNREWPAetadlda 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1072 ------------DELVEHKIREVNDRWKRELER------------LENEKDDLERRIRELEDELSQIGRGNDKTendIT- 1126
Cdd:COG4913 810 dleslpeylallDRLEEDGLPEYEERFKELLNEnsiefvadllskLRRAIREIKERIDPLNDSLKRIPFGPGRY---LRl 886
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 1767287514 1127 ELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENL 1168
Cdd:COG4913 887 EARPRPDPEVREFRQELRAVTSGASLFDEELSEARFAALKRL 928
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
601-1486 |
1.34e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 60.57 E-value: 1.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 601 RTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD---ARKLRDEMDEHTNSiqEEFKTRIDELNRRVENLLRE 677
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKnalQEQLQAETELCAEA--EEMRARLAARKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 678 nnrLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD-------NEKILGELEH 750
Cdd:pfam01576 80 ---LESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDillledqNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 751 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLR- 829
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRa 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 830 ---RHNDELdttikghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELE 903
Cdd:pfam01576 237 qlaKKEEEL-------QAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAarnKAEKQRRDLGEELEALKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 904 ----------KLRNENKELVG-------KEARARDAANQQLSRA-----NLLNKELEDTKQDlKHSTDVNKQ-LEQDIRD 960
Cdd:pfam01576 310 dtldttaaqqELRSKREQEVTelkkaleEETRSHEAQLQEMRQKhtqalEELTEQLEQAKRN-KANLEKAKQaLESENAE 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 961 LKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVfvpaaedieSRGGGEID-IPSSGDVIHGRDGRD 1039
Cdd:pfam01576 389 LQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKL---------SKLQSELEsVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1040 GRDAGNRGTHtITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENE---KDDLERRIRELEDELSQIGR 1116
Cdd:pfam01576 460 SKDVSSLESQ-LQDTQELLQEETRQKLN-------LSTRLRQLEDERNSLQEQLEEEeeaKRNVERQLSTLQAQLSDMKK 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1117 gndKTEND------ITELKRKHAAEIDKLKSDI---SALHDKhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQ-- 1185
Cdd:pfam01576 532 ---KLEEDagtleaLEEGKKRLQRELEALTQQLeekAAAYDK----LEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKqk 604
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1186 -----LADSLN----------------RENE-----LEREKRDYDEKINSLYGQNQKIKDEWDDF---RNDADKEIQKWK 1236
Cdd:pfam01576 605 kfdqmLAEEKAisaryaeerdraeaeaREKEtralsLARALEEALEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELE 684
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1237 TDAYTVRSEAKALETTNTALKAQLQAANDRidHLTKTVNDHTSKV-----------------RDLTSQVRHLEDELADTK 1299
Cdd:pfam01576 685 RSKRALEQQVEEMKTQLEELEDELQATEDA--KLRLEVNMQALKAqferdlqardeqgeekrRQLVKQVRELEAELEDER 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1300 GNLVQK-------EMDL--------------ESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRENDilkSNNTNME 1355
Cdd:pfam01576 763 KQRAQAvaakkklELDLkeleaqidaankgrEEAVKQLKKLQAQMKDLQrelEEARASRDEILAQSKESE---KKLKNLE 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1356 TDLTRLKNRLKSAEDALKelknslsHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD-------TNDKL 1428
Cdd:pfam01576 840 AELLQLQEDLAASERARR-------QAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEeqsntelLNDRL 912
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1429 ITSDTERNALRNELQ---KLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQ 1486
Cdd:pfam01576 913 RKSTLQVEQLTTELAaerSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALE 973
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1051-1512 |
1.35e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.46 E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERIERIEKNIL--DRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndkTENDITEL 1128
Cdd:PRK03918 140 ILESDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLR----EINEISSE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1129 KRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRdklnNLEKQLADSLNRENELEREKRDYDE--K 1206
Cdd:PRK03918 216 LPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKLEEKIR----ELEERIEELKKEIEELEEKVKELKElkE 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1207 INSLYGQNQKIKDEWDDFRNDADKEIQKWktdaytvRSEAKALEttntalkAQLQAANDRidhltktvndhTSKVRDLTS 1286
Cdd:PRK03918 291 KAEEYIKLSEFYEEYLDELREIEKRLSRL-------EEEINGIE-------ERIKELEEK-----------EERLEELKK 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1287 QVRHLEDELADTKGNlVQKEMDLESTQNRLRSLEDQHSTLQSDanKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1366
Cdd:PRK03918 346 KLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1367 SAEDALKELKNS-----LSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTnDKLITSDTERNALR-- 1439
Cdd:PRK03918 423 ELKKAIEELKKAkgkcpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKel 501
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1440 -NELQKLSQELK-FGNEQIQRKSDEYQTTIDDLA--HSHRVSEDSRLNALQELEARKYEINdltSRLDSTEQRLATL 1512
Cdd:PRK03918 502 aEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIklKGEIKSLKKELEKLEELKKKLAELE---KKLDELEEELAEL 575
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
541-964 |
1.60e-08 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 59.85 E-value: 1.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 620
Cdd:PRK04778 105 HEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSL-----------------LANRFSFGPAL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 621 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNsiqeEFKTRIDElnrrVENLLRE-NNRLKSEVNPLKDKY 692
Cdd:PRK04778 168 DELEKQLENLEEEFSQFVEltesgdyVEAREILDQLEEELA----ALEQIMEE----IPELLKElQTELPDQLQELKAGY 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 693 RDLENE-YNstqrrIEEKetqirysddirrNIQKDLDDLREKYDRvhtdNEKILGELEHAQkaahlAEQQLKEIKIQRDd 771
Cdd:PRK04778 240 RELVEEgYH-----LDHL------------DIEKEIQDLKEQIDE----NLALLEELDLDE-----AEEKNEEIQERID- 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 772 yqkqkdeharHLFDIrhkLETEIKGRQDLEKNgarnndeldklrqtISDYESQINLLRRHNDELDTtikghqgKITHL-- 849
Cdd:PRK04778 293 ----------QLYDI---LEREVKARKYVEKN--------------SDTLPDFLEHAKEQNKELKE-------EIDRVkq 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 850 -----ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARD 921
Cdd:PRK04778 339 sytlnESELESVRQLEKQLESLEKQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEARE 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 922 AANQ----------QLSRANL--------------------LNKELEDTKQDLKhstDVNKQLEQ---DIRDLKER 964
Cdd:PRK04778 419 KLERyrnklheikrYLEKSNLpglpedylemffevsdeieaLAEELEEKPINME---AVNRLLEEateDVETLEEE 491
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
442-969 |
1.75e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsiKRTRSLSPGKT 521
Cdd:PRK02224 240 DEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE---------------ERDDLLAEAGL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 522 PLPPSEALRAVRNTFrnkDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRR 601
Cdd:PRK02224 305 DDADAEAVEARREEL---EDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVED 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 602 TDDKLRASEAERVAAEKARKFLEDELaklqasfqksstDDARKLRDEMDEHTNSIQEEFKTRIDELnRRVENLLRENNRL 681
Cdd:PRK02224 382 RREEIEELEEEIEELRERFGDAPVDL------------GNAEDFLEELREERDELREREAELEATL-RTARERVEEAEAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 682 KSEVN------PLKDkyrdleneyNSTQRRIEEKETQIrysddirRNIQKDLDDLREKYDRVhtdnEKILGELEHAQKaa 755
Cdd:PRK02224 449 LEAGKcpecgqPVEG---------SPHVETIEEDRERV-------EELEAELEDLEEEVEEV----EERLERAEDLVE-- 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 756 hlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDEL 835
Cdd:PRK02224 507 --AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 836 DTTIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQkEKQDILNQKLKldgdvqALKETIRKLENELEKLRNEnkelvgk 915
Cdd:PRK02224 585 KERIES-LERIRTLLAAIADAEDEIERLREKREALA-ELNDERRERLA------EKRERKRELEAEFDEARIE------- 649
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 916 EARA-RDAANQQLSRANLLNKELEDTKQDLKHSTD-VNKQLEQdIRDLKERLANIG 969
Cdd:PRK02224 650 EAREdKERAEEYLEQVEEKLDELREERDDLQAEIGaVENELEE-LEELRERREALE 704
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
773-970 |
2.09e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 773 QKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENE 852
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 853 LHSRSGEIEKLNDLNQRL--QKEKQDILNQK--LKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 928
Cdd:COG4942 99 LEAQKEELAELLRALYRLgrQPPLALLLSPEdfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1767287514 929 RANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 970
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQ 220
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1673-2144 |
2.61e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1673 IEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRlqsaKTLLRSQEEALKQRDEERRQ 1752
Cdd:PRK03918 181 LEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL----KEEIEELEKELESLEGSKRK 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1753 MKSKMVAAELQARGKEAQLRHLNEQLKnlrtdldnahtDIRSLRDKEEQWDssrfQLETKMRESDSDTNKYQLQIASFES 1832
Cdd:PRK03918 257 LEEKIRELEERIEELKKEIEELEEKVK-----------ELKELKEKAEEYI----KLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1833 ERQILTEKIKELDGalrlSDSKVQDMKDDTDKLRRDL----TKAESVENELRKTIDIQSKTSHEYQLLKDQLlntQNELN 1908
Cdd:PRK03918 322 EINGIEERIKELEE----KEERLEELKKKLKELEKRLeeleERHELYEEAKAKKEELERLKKRLTGLTPEKL---EKELE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1909 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQ---------RQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD 1979
Cdd:PRK03918 395 ELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcGRELTEEHRKELLEEYTAELKRIEKELKEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1980 LRQ------QLETA-KNEKRVAT-----KELEDLKRRLAQLENER--------RNSSQLSDGWKKEKITL---LKKIELL 2036
Cdd:PRK03918 475 ERKlrkelrELEKVlKKESELIKlkelaEQLKELEEKLKKYNLEElekkaeeyEKLKEKLIKLKGEIKSLkkeLEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2037 ENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQReEQERQLIRMRQEKG 2116
Cdd:PRK03918 555 KKKLAELEKKLDE-------LEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEK-ELEREEKELKKLEE 626
|
490 500
....*....|....*....|....*...
gi 1767287514 2117 QIEKVIENRERThRNRIKQLEDQIAILR 2144
Cdd:PRK03918 627 ELDKAFEELAET-EKRLEELRKELEELE 653
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
860-1451 |
2.63e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 2.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 860 IEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---LKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRANLLNKE 936
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRtenIEELIKEKEKELEEVLREINEISSELPELR----EELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 937 LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgdrssvadpsrtrgaagstvfvpaaEDIE 1016
Cdd:PRK03918 233 LEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEI---------------------------------EELE 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1017 SRGG--GEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEhKIREVNDRWKRELERLE 1094
Cdd:PRK03918 280 EKVKelKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELEKRLEELE 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1095 nEKDDLERRIRELEDELSQI-----GRGNDKTENDITELKRKHaaeiDKLKSDISALHDKhLSDLDDEKEQYGKAVENLK 1169
Cdd:PRK03918 359 -ERHELYEEAKAKKEELERLkkrltGLTPEKLEKELEELEKAK----EEIEEEISKITAR-IGELKKEIKELKKAIEELK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1170 SVE-------------------DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKIN---------SLYGQNQKIKDEW 1221
Cdd:PRK03918 433 KAKgkcpvcgrelteehrkellEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKkeseliklkELAEQLKELEEKL 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1222 DDFrnDADKEIQKWKtdaytvrsEAKALETTNTALKAQLQAANDRIdhltKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1301
Cdd:PRK03918 513 KKY--NLEELEKKAE--------EYEKLKEKLIKLKGEIKSLKKEL----EKLEELKKKLAELEKKLDELEEELAELLKE 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1302 LVQKEM-DLESTQNRLRSLEDQHSTLQSdANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLS 1380
Cdd:PRK03918 579 LEELGFeSVEELEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS 657
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1381 haKTEKERLQNAFREKTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKF 1451
Cdd:PRK03918 658 --EEEYEELREEYLELSRE---LAGLRAELEE-LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALER 722
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1658-1855 |
2.89e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.24 E-value: 2.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1737
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1738 SQEEALKQR-----------------------DEERRQMKSKMVAAELQARGKEaqLRHLNEQLKNLRTDLDNAHTDIRS 1794
Cdd:COG4942 101 AQKEELAELlralyrlgrqpplalllspedflDAVRRLQYLKYLAPARREQAEE--LRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1795 LRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKV 1855
Cdd:COG4942 179 LLAELEEeraaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1660-2140 |
3.14e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.28 E-value: 3.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1660 ANLEGTLQSLLNKIEklEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLlrsq 1739
Cdd:PRK02224 183 SDQRGSLDQLKAQIE--EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETL---- 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1740 EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsd 1819
Cdd:PRK02224 257 EAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC--- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1820 tnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSK----TSHEYQL 1895
Cdd:PRK02224 334 ----RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdAPVDLGN 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1896 LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---------------------RVHDVNNRVSELQRQLQDANT 1954
Cdd:PRK02224 410 AEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1955 EKNRVEDRFLSVEKVVNTMRTTETdLRQQLETAknEKRVATKElEDLKRRLAQLENERRNSSQLSDgwkkekitllkkie 2034
Cdd:PRK02224 490 EVEEVEERLERAEDLVEAEDRIER-LEERREDL--EELIAERR-ETIEEKRERAEELRERAAELEA-------------- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2035 llENEKRRTDAAIRETALQREAIE-KSLNAMERENKElykncaqlqqqiaqlEMENGNRILELTNKqREEQERQLIRMRQ 2113
Cdd:PRK02224 552 --EAEEKREAAAEAEEEAEEAREEvAELNSKLAELKE---------------RIESLERIRTLLAA-IADAEDEIERLRE 613
|
490 500 510
....*....|....*....|....*....|
gi 1767287514 2114 EKGQI-EKVIENRER--THRNRIKQLEDQI 2140
Cdd:PRK02224 614 KREALaELNDERRERlaEKRERKRELEAEF 643
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1659-2120 |
5.58e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.19 E-value: 5.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1659 IANLEGTLQSLLNKIEK----LEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKT 1734
Cdd:pfam05483 224 IQHLEEEYKKEINDKEKqvslLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKM 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1735 LLRSQEEALKQRdEERRQMKSKMVAAELQArgKEAQLRHLNE----------QLKNLRTDLDN-AHTDIRSLRDKEEQWD 1803
Cdd:pfam05483 304 SLQRSMSTQKAL-EEDLQIATKTICQLTEE--KEAQMEELNKakaahsfvvtEFEATTCSLEElLRTEQQRLEKNEDQLK 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1804 SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDgalrlSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI 1883
Cdd:pfam05483 381 IITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD-----EKKQFEKIAEELKGKEQELIFLLQAREKEIHDL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1884 DIQ---SKTSHEYQLLKDQLLNTQNElngannrKQQLENELLNVRSE--VRDYKQRVHDVNNRVSELQRQLQDANTEKNR 1958
Cdd:pfam05483 456 EIQltaIKTSEEHYLKEVEDLKTELE-------KEKLKNIELTAHCDklLLENKELTQEASDMTLELKKHQEDIINCKKQ 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1959 vEDRFLsveKVVNTMRTTETDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLEN 2038
Cdd:pfam05483 529 -EERML---KQIENLEEKEMNLRDELESVREEFI---QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2039 EKRRTDAAIRETALQREAIEKSLNAmerENKELykNCAQLQQQIAQLEMENG-NRILELTNKQREEQERQLIRMRQEKGQ 2117
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSA---ENKQL--NAYEIKVNKLELELASAkQKFEEIIDNYQKEIEDKKISEEKLLEE 676
|
...
gi 1767287514 2118 IEK 2120
Cdd:pfam05483 677 VEK 679
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
442-1262 |
5.60e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.44 E-value: 5.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIERNIELESRGDDSQR--KIAELEAELRRNREKLNEAQGALKKLHEMA--QDSEKNVDGTVSIKRTRSLS 517
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKlkEQAKKALEYYQLKEKLELEEEYLLYLDYLKlnEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 518 PGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAER 597
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 598 NSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRE 677
Cdd:pfam02463 336 EIEELEKELKELEIKREAEEEEEEELEKLQEKLEQ--LEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 678 NNRLKSEVNPLKDKYRDLENEynsTQRRIEEKETQIRysddIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQkaahL 757
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEE---EEESIELKQGKLT----EEKEELEKQELKLLKDELELKKSEDLLKETQLVK----L 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 758 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT 837
Cdd:pfam02463 483 QEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 838 TIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQaLKETIRKLENELEKLRNENKELVGKE- 916
Cdd:pfam02463 563 RQKL-VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATL-EADEDDKRAKVVEGILKDTELTKLKEs 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 917 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADP 996
Cdd:pfam02463 641 AKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI--LRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 997 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRdagnrgthtitntKERIERIEKNILDRYHDDELVE 1076
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKE-------------EEKSELSLKEKELAEEREKTEK 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1077 HKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENdiTELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKE--EELEELALELKEEQKLEKLAEEELERLEEEI 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1157 EKEQYgKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1236
Cdd:pfam02463 864 TKEEL-LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*.
gi 1767287514 1237 TDAYTVRSEAKALETTNTALKAQLQA 1262
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLA 968
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
576-1384 |
6.31e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 58.52 E-value: 6.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 576 KQFADAKREISNLQKSVDEAERNSR-------RTDDKLRA---SEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKL 645
Cdd:TIGR01612 620 KKAIDLKKIIENNNAYIDELAKISPyqvpehlKNKDKIYStikSELSKIYEDDIDA-LYNELSSIVKENAIDNTEDKAKL 698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 646 RD---EMDEHTNSIQEeFKTRIDELNrrVENLLRENNRLKSEVNPLKDK-YRDLENEYNSTQRRIEEKETQI-------- 713
Cdd:TIGR01612 699 DDlksKIDKEYDKIQN-METATVELH--LSNIENKKNELLDIIVEIKKHiHGEINKDLNKILEDFKNKEKELsnkindya 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 714 RYSDDIRRNIQKdLDDLREKY-DRVHTDNEKIlgelEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLET 792
Cdd:TIGR01612 776 KEKDELNKYKSK-ISEIKNHYnDQINIDNIKD----EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDK 850
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 793 EIkgrqDLEKNGARNNDeldklrqtiSDYESQINLLRRHNDELDTTikghqgKITHLENELHSRSGEIeklNDLNQRLQK 872
Cdd:TIGR01612 851 FI----NFENNCKEKID---------SEHEQFAELTNKIKAEISDD------KLNDYEKKFNDSKSLI---NEINKSIEE 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 873 EKQDIlNQKLKLDGDV---QALKETIRKLENELEKLR---NENKELVgKEARARDAANQQLSRANLLNK--ELEDTKQDL 944
Cdd:TIGR01612 909 EYQNI-NTLKKVDEYIkicENTKESIEKFHNKQNILKeilNKNIDTI-KESNLIEKSYKDKFDNTLIDKinELDKAFKDA 986
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 945 KHST--DVNKQLEQDIRDLKERLANiGKGGRISRDsttgtdggaFGDRSSvadpsrtrgaagstvfvpAAEDIESRG-GG 1021
Cdd:TIGR01612 987 SLNDyeAKNNELIKYFNDLKANLGK-NKENMLYHQ---------FDEKEK------------------ATNDIEQKIeDA 1038
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1022 EIDIPSSGDVIHGrdgrdgrdagnrgthTITNTKERIER-IEKNIlDRYHDDELVEHKIREVNDRWKRELERLENEKDDL 1100
Cdd:TIGR01612 1039 NKNIPNIEIAIHT---------------SIYNIIDEIEKeIGKNI-ELLNKEILEEAEINITNFNEIKEKLKHYNFDDFG 1102
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1101 ER-------RIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALH---DKHLSdlDDEKEQYGKAVENLKS 1170
Cdd:TIGR01612 1103 KEenikyadEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEdvaDKAIS--NDDPEEIEKKIENIVT 1180
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1171 VeddlRDKLNNLEKQLADSLNRENELEREKRDYDE--KINSLYGQN------QKIKDEWDDFRNDAdKEIQKWKTDAYTV 1242
Cdd:TIGR01612 1181 K----IDKKKNIYDEIKKLLNEIAEIEKDKTSLEEvkGINLSYGKNlgklflEKIDEEKKKSEHMI-KAMEAYIEDLDEI 1255
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1243 RSEAKALETTntalkaqlQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQ 1322
Cdd:TIGR01612 1256 KEKSPEIENE--------MGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIR----EKSLKIIEDFSEESDINDI 1323
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1323 HSTLQ---SDANKWRGELDAALRE----NDILKSNntNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1384
Cdd:TIGR01612 1324 KKELQknlLDAQKHNSDINLYLNEianiYNILKLN--KIKKIIDEVKEYTKEIEENNKNIKDELDKSEK 1390
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
543-1176 |
6.51e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 58.31 E-value: 6.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 543 IQQLERKLKIAESQVKEFLNKFenaDEARRRLDKQFADAKREIsnlQKSVDEAERNSRRTDDKLRASEAERVAAE-KARK 621
Cdd:pfam12128 260 LSHLHFGYKSDETLIASRQEER---QETSAELNQLLRTLDDQW---KEKRDELNGELSAADAAVAKDRSELEALEdQHGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 622 FLEDELAKLQA------SFQ----------KSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV 685
Cdd:pfam12128 334 FLDADIETAAAdqeqlpSWQselenleerlKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVA 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 686 --------NPLKDKYRDLENEYNSTQRRI-----------------EEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 740
Cdd:pfam12128 414 eddlqaleSELREQLEAGKLEFNEEEYRLksrlgelklrlnqatatPELLLQLENFDERIERAREEQEAANAEVERLQSE 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 741 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHK------------LETEIKGRQDL--EKNGAR 806
Cdd:pfam12128 494 LRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigkvISPELLHRTDLdpEVWDGS 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 807 NNDE-------LDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKlndlnqrLQKEKQDILN 879
Cdd:pfam12128 574 VGGElnlygvkLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEK-------ASREETFART 646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 880 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKElEDTKQDLKHSTDVNKQLEQDIR 959
Cdd:pfam12128 647 ALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLE-EQKEQKREARTEKQAYWQVVEG 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 960 DLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVFVPAAEDIESRGggeIDipssGDVIHGRDgrd 1039
Cdd:pfam12128 726 ALDAQLALL---------------------KAAIAARRSGAKAELKALETWYKRDLASLG---VD----PDVIAKLK--- 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1040 grdagnRGTHTITNTKERIERIEKNILdRYHDdelvehkirEVNDRWKRELERLENEKDDLERRIRELEDELSQI----- 1114
Cdd:pfam12128 775 ------REIRTLERKIERIAVRRQEVL-RYFD---------WYQETWLQRRPRLATQLSNIERAISELQQQLARLiadtk 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1115 --------GRG-NDKTENDITELKRKHAAEIDKL----------KSDISALH-----DKHLSDLDDEKEQYGKAVENLKS 1170
Cdd:pfam12128 839 lrraklemERKaSEKQQVRLSENLRGLRCEMSKLatlkedanseQAQGSIGErlaqlEDLKLKRDYLSESVKKYVEHFKN 918
|
....*.
gi 1767287514 1171 VEDDLR 1176
Cdd:pfam12128 919 VIADHS 924
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
751-1515 |
6.65e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.52 E-value: 6.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 751 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTIsdyesqinlLRR 830
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKV---------FQG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 831 HNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRnenk 910
Cdd:TIGR00606 299 TDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA---- 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 911 elvgkearardaanqqlsranlLNKELEdtkqDLKHSTDVNKQLEQDIRDLKERLAniGKGGRISRDSTTGTDGGAFGDR 990
Cdd:TIGR00606 375 ----------------------TRLELD----GFERGPFSERQIKNFHTLVIERQE--DEAKTAAQLCADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 991 ssvadpsrtrgaagstvfvpAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGtHTITNTKERIERIEKNILDRYH 1070
Cdd:TIGR00606 427 --------------------QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL-QQLEGSSDRILELDQELRKAER 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1071 DDELVEHKirEVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgnDKTENDITELKRKHAAEIDKLKSDISALHDKH 1150
Cdd:TIGR00606 486 ELSKAEKN--SLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNH--HTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1151 LSDLDDE---KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqNQKIKD--EWDDFR 1225
Cdd:TIGR00606 562 LTSLLGYfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSY---EDKLFDvcGSQDEE 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1226 NDAD---KEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEladtkgnl 1302
Cdd:TIGR00606 639 SDLErlkEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK-------- 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1303 vqkemdLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHA 1382
Cdd:TIGR00606 711 ------LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1383 K------TEKERLQNAFREKTKQADHL--NQLASQFDTKLTKLRNELQDTNDKL--ITSDTErnalrnELQKLSQELKFG 1452
Cdd:TIGR00606 785 KvcltdvTIMERFQMELKDVERKIAQQaaKLQGSDLDRTVQQVNQEKQEKQHELdtVVSKIE------LNRKLIQDQQEQ 858
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 1453 NEQIQRKSDEYQT---TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1515
Cdd:TIGR00606 859 IQHLKSKTNELKSeklQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQE 924
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
449-724 |
6.74e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 6.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 449 EESIERNIeLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRtrslspgktplppsea 528
Cdd:TIGR02169 781 LNDLEARL-SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI---------------- 843
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 529 lravrntfrnkDNDIQQLERKLKIAESQVK--EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERnsrrtddKL 606
Cdd:TIGR02169 844 -----------DLKEQIKSIEKEIENLNGKkeELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER-------KI 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 607 RASEAERvaaEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-- 684
Cdd:TIGR02169 906 EELEAQI---EKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEye 982
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 685 -----VNPLKDKYRDLENEYNSTQRRIEEKETQIRYS-----DDIRRNIQ 724
Cdd:TIGR02169 983 evlkrLDELKEKRAKLEEERKAILERIEEYEKKKREVfmeafEAINENFN 1032
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
565-976 |
7.54e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.86 E-value: 7.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 565 ENADEARRRLDKQFADAKREISNLQKSVDEAE---RNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQksstdd 641
Cdd:COG4717 53 KEADELFKPQGRKPELNLKELKELEEELKEAEekeEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ------ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 ARKLRDEMDEHTNSIqEEFKTRIDELNRRVEnllrennrlksEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirr 721
Cdd:COG4717 127 LLPLYQELEALEAEL-AELPERLEELEERLE-----------ELRELEEELEELEAELAELQEELEELLEQLSLAT---- 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 722 niQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEI--KIQRDDYQKQKDEHARHLFDI------------- 786
Cdd:COG4717 191 --EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLenELEAAALEERLKEARLLLLIAaallallglggsl 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 787 -------------------------RHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 841
Cdd:COG4717 269 lsliltiagvlflvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 842 HQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQ----DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVgkEA 917
Cdd:COG4717 349 LQELLREAEELEEEL--QLEELEQEIAALLAEAGvedeEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL--EA 424
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 918 RARDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIGKGGRISR 976
Cdd:COG4717 425 LDEEELEEELEE---LEEELEELEEEL-------EELREELAELEAELEQLEEDGELAE 473
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
439-939 |
7.81e-08 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 57.83 E-value: 7.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 439 ELHKELMTKYEESIERNIELESRGDDSQRKIA-------ELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK 511
Cdd:pfam05557 13 QLQNEKKQMELEHKRARIELEKKASALKRQLDresdrnqELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 512 RTRSLSpgktplppseaLRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS 591
Cdd:pfam05557 93 NEKESQ-----------LADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 592 VDEAE-----------RNSRRTDDKLRA----SEAERVA---AEKAR---------------KFLEDELAKLQASFQK-- 636
Cdd:pfam05557 162 QSSLAeaeqrikelefEIQSQEQDSEIVknskSELARIPeleKELERlrehnkhlnenienkLLLKEEVEDLKRKLERee 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 637 -------SSTDDARKLRDEMDEHTNSIQ---------EEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYN 700
Cdd:pfam05557 242 kyreeaaTLELEKEKLEQELQSWVKLAQdtglnlrspEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQELA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 701 STQRRIEEKETQIRYSDDIRRNIQKDL-------DDLR---EKYDRVHTDNEKILGELEHAQKAAHLAEQ---QLKEIKI 767
Cdd:pfam05557 322 QYLKKIEDLNKKLKRHKALVRRLQRRVllltkerDGYRailESYDKELTMSNYSPQLLERIEEAEDMTQKmqaHNEEMEA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 768 QRDdyqkQKDEHARHLFDIRHKLETEIKG--RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGH--Q 843
Cdd:pfam05557 402 QLS----VAEEELGGYKQQAQTLERELQAlrQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRclQ 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 844 GKITHLENE-LHSRSGEIeklndlnqrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDA 922
Cdd:pfam05557 478 GDYDPKKTKvLHLSMNPA----------AEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLD 547
|
570
....*....|....*..
gi 1767287514 923 ANQQLSRANLLNKELED 939
Cdd:pfam05557 548 LRKELESAELKNQRLKE 564
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
422-901 |
1.08e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.08 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 422 LEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELEsrgdDSQRKIAELEAELRRNREKLNEAQGALKKLhEMAQDSE 501
Cdd:COG4717 55 ADELFKPQGRKPELNLKEL-KELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREELEKL-EKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 502 KNVDGTVSIKRTRSLSPGKTplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFAD 580
Cdd:COG4717 129 PLYQELEALEAELAELPERL-----EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 581 AKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSstddARKLRDEMDEHTNSIQEEF 660
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLA----LLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 661 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 740
Cdd:COG4717 280 FLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 741 NEKILGELEHAQKAAHLAEQQLKEIK--IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTI 818
Cdd:COG4717 360 EEELQLEELEQEIAALLAEAGVEDEEelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEAL-----DEEELEEEL 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 819 SDYESQINLLRRHNDELDTTIKGHQGKITHLENelhsrSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 898
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEY 509
|
...
gi 1767287514 899 ENE 901
Cdd:COG4717 510 REE 512
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
724-1514 |
1.36e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 724 QKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRDD---YQKQKDE----HARHLFDIRHKLETEIkg 796
Cdd:COG1196 178 ERKLEATEENLERL----EDILGELE----------RQLEPLERQAEKaerYRELKEElkelEAELLLLKLRELEAEL-- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 797 rQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 876
Cdd:COG1196 242 -EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 877 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 956
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 957 DIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrd 1036
Cdd:COG1196 401 QLEELEEAEEAL-------------------------------------------------------------------- 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1037 grdgrdagnrgthtitntKERIERIEKNILDRyhddelvehkirevndrwKRELERLENEKDDLERRIRELEDELSQIGR 1116
Cdd:COG1196 413 ------------------LERLERLEEELEEL------------------EEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1117 GNDKTENDITELKRKHA---AEIDKLKSDISALHDKHLSDLDDEKEQYGKAvenlksvEDDLRDKLNNLEKQLADSLNRE 1193
Cdd:COG1196 457 EEEALLELLAELLEEAAlleAALAELLEELAEAAARLLLLLEAEADYEGFL-------EGVKAALLLAGLRGLAGAVAVL 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1194 NELEREKRDYDEKINSLYGQNQKIKDEWDdfrndADKEIQKWKTDaytvRSEAKALETTNTALKAQLQAANDRIDHLTKT 1273
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEV-----AAAAIEYLKAA----KAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1274 VNDHTSKVRDLTSQVRHLEDELADTkgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALRENDILKSNN 1351
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGR--TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLtgGSRRELLAALLEAE 678
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1352 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1431
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1432 DTERNALRNELQKLSQELK-FG--NeqiqrksdeyqttiddlahshrvsedsrLNALQELEARKYEINDLTSRLDSTEQR 1508
Cdd:COG1196 759 PPDLEELERELERLEREIEaLGpvN----------------------------LLAIEEYEELEERYDFLSEQREDLEEA 810
|
....*.
gi 1767287514 1509 LATLQQ 1514
Cdd:COG1196 811 RETLEE 816
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1255-1401 |
1.41e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 54.93 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1255 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdaNKwr 1334
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN--NK-- 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1335 gELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQAD 1401
Cdd:COG1579 90 -EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
527-1369 |
1.46e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 57.36 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 527 EALRAVRNTFRNKDNDIQ---QLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD 603
Cdd:TIGR00606 189 ETLRQVRQTQGQKVQEHQmelKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLD 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 604 DKLRASEAERVAAEKARKFLEDELAKLqasFQKSstddarklrdemDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKS 683
Cdd:TIGR00606 269 NEIKALKSRKKQMEKDNSELELKMEKV---FQGT------------DEQLNDLYHNHQRTVREKERELVDCQRELEKLNK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 684 EVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQ--KDLDDL-REKYDRVHTDNE---KILGELEHAQKAAHL 757
Cdd:TIGR00606 334 ERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLAtrLELDGFeRGPFSERQIKNFhtlVIERQEDEAKTAAQL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 758 -AEQQLKEIKIQR--DDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGAR---NNDELDKLRQTISDYESQINLLrrh 831
Cdd:TIGR00606 414 cADLQSKERLKQEqaDEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegSSDRILELDQELRKAERELSKA--- 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 832 ndELDTTIKGHQGKITHLENE----LHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIR----------- 896
Cdd:TIGR00606 491 --EKNSLTETLKKEVKSLQNEkadlDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsllgy 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 897 -----KLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQDLKHSTDV-----NKQLEQDIRDLKERL 965
Cdd:TIGR00606 569 fpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESkEEQLSSYEDKLfdvcgSQDEESDLERLKEEI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 966 ANIGKGGRISRDSTTGTDG--GAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEID-IPSSGDVIHGRDGRDGRD 1042
Cdd:TIGR00606 649 EKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDkLKSTESELKKKEKRRDEM 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1043 AG---------NRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRE---------LERLENEKDDLERRI 1104
Cdd:TIGR00606 729 LGlapgrqsiiDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvcltdvtiMERFQMELKDVERKI 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1105 RELEDELSqiGRGNDKTENDITELKRKHAAEIDKLKSDISALH-------------DKHLSDLDDEKEQYGKAVENLKSV 1171
Cdd:TIGR00606 809 AQQAAKLQ--GSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRkliqdqqeqiqhlKSKTNELKSEKLQIGTNLQRRQQF 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1172 EDDLRDK---LNNLEKQLADSLNRENELEREKRDY----DEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1244
Cdd:TIGR00606 887 EEQLVELsteVQSLIREIKDAKEQDSPLETFLEKDqqekEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD 966
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1245 ----EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE 1320
Cdd:TIGR00606 967 gkddYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQ 1046
|
890 900 910 920
....*....|....*....|....*....|....*....|....*....
gi 1767287514 1321 DQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAE 1369
Cdd:TIGR00606 1047 MQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1705-2149 |
1.55e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.23 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1705 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTD 1784
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1785 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT-NKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTD 1863
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1864 KLRRDLTKAESVENELRKTIdiqsktsheyqllkdqllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 1943
Cdd:COG4913 384 ALRAEAAALLEALEEELEAL--------------------EEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1944 ELQRQLQDAnTEKNRVEDRFL---------------SVEKVVNTMRTT----------------ETDLRQQLETAKNEKR 1992
Cdd:COG4913 444 ALRDALAEA-LGLDEAELPFVgelievrpeeerwrgAIERVLGGFALTllvppehyaaalrwvnRLHLRGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1993 VATKELED--------------------LKRRLA------------QLENERRN---SSQLSDGW----KKEKITLL--- 2030
Cdd:COG4913 523 LPDPERPRldpdslagkldfkphpfrawLEAELGrrfdyvcvdspeELRRHPRAitrAGQVKGNGtrheKDDRRRIRsry 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2031 -------KKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREnKELYKNCAQLQQQIAQ---------------LEME 2088
Cdd:COG4913 603 vlgfdnrAKLAALEAELAELEEELAEAEERLEALEAELDALQER-REALQRLAEYSWDEIDvasaereiaeleaelERLD 681
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 2089 NGNRILELTNKQREEQERQLIRMRQEKGQIEKvienRERTHRNRIKQLEDQIAILRDQLDG 2149
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKG----EIGRLEKELEQAEEELDELQDRLEA 738
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
754-986 |
1.61e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 754 AAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 833
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 834 ELDTTIKGHQGKITHLENELHsRSGEIEKLNDLNQrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELV 913
Cdd:COG4942 94 ELRAELEAQKEELAELLRALY-RLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 914 GKEARARDAANQQLSRANLLNKE-------LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA 986
Cdd:COG4942 171 AERAELEALLAELEEERAALEALkaerqklLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
541-955 |
1.80e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.65 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 541 NDIQQLERKLKIAESQVKEFLNK--------------FENADEARRRLDKQFADAKREISNL--QKSVDEAERNSRRTDD 604
Cdd:pfam05483 268 DKANQLEEKTKLQDENLKELIEKkdhltkeledikmsLQRSMSTQKALEEDLQIATKTICQLteEKEAQMEELNKAKAAH 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 605 KLRASE--------AERVAAEKAR-KFLEDELAKLQASFQKSSTDdarklRDEMDEHTNSIQ---EEFKTRIDElnrrVE 672
Cdd:pfam05483 348 SFVVTEfeattcslEELLRTEQQRlEKNEDQLKIITMELQKKSSE-----LEEMTKFKNNKEvelEELKKILAE----DE 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 673 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE----L 748
Cdd:pfam05483 419 KLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHcdklL 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 749 EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLL 828
Cdd:pfam05483 499 LENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSI 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 829 RRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKeKQDILNQKLkldgdvQALKETIRKLENELEKLRNE 908
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK-KGSAENKQL------NAYEIKVNKLELELASAKQK 651
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1767287514 909 NKELVgkEARARDAANQQLSRANLLnKELEDTKQDLKHSTDVNKQLE 955
Cdd:pfam05483 652 FEEII--DNYQKEIEDKKISEEKLL-EEVEKAKAIADEAVKLQKEID 695
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
545-963 |
2.26e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.27 E-value: 2.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 545 QLERKLKIAESQVK------EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 618
Cdd:pfam05483 210 RLEMHFKLKEDHEKiqhleeEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 619 ARKFLEDELAKLQASFQKSSTDDaRKLRDEMDEHTNSI---QEEFKTRIDELNR-----------------RVENLLR-E 677
Cdd:pfam05483 290 KKDHLTKELEDIKMSLQRSMSTQ-KALEEDLQIATKTIcqlTEEKEAQMEELNKakaahsfvvtefeattcSLEELLRtE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 678 NNRLKSEVNPLKDKYRDLE---NEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD---LREKYDRVHTDNEKILGELEHA 751
Cdd:pfam05483 369 QQRLEKNEDQLKIITMELQkksSELEEMTKFKNNKEVELEELKKILAEDEKLLDEkkqFEKIAEELKGKEQELIFLLQAR 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 752 QKAAHLAEQQLKEIKIQRDDYQKQKDeharhlfDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD-------YESQ 824
Cdd:pfam05483 449 EKEIHDLEIQLTAIKTSEEHYLKEVE-------DLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDmtlelkkHQED 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 825 INLLRRHNDELDTTIKGHQGKITHLENELHS-RSGEIEKLNDLNQRLQKEKQDILN----------QKLKLDGDVQALKE 893
Cdd:pfam05483 522 IINCKKQEERMLKQIENLEEKEMNLRDELESvREEFIQKGDEVKCKLDKSEENARSieyevlkkekQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 894 TIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDvNKQLEQDIRDLKE 963
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIID-NYQKEIEDKKISE 670
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
567-824 |
2.73e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 2.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 567 ADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLR 646
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA--------ELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 647 DEMDEhtnsIQEEFKTRIDELNRRVENLLR--ENNRLKSEVNPlkdkyrdleNEYNSTQRRieeketqIRYSDDIRRNIQ 724
Cdd:COG4942 90 KEIAE----LRAELEAQKEELAELLRALYRlgRQPPLALLLSP---------EDFLDAVRR-------LQYLKYLAPARR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 725 KDLDDLREKYDRVHTDNEKIlgELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNG 804
Cdd:COG4942 150 EQAEELRADLAELAALRAEL--EAERAELEALLAELE-----EERAALEALKAERQKLLARLEKELAELAAELAELQQEA 222
|
250 260
....*....|....*....|
gi 1767287514 805 ARNNDELDKLRQTISDYESQ 824
Cdd:COG4942 223 EELEALIARLEAEAAAAAER 242
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
706-1052 |
2.73e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.22 E-value: 2.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 706 IEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFd 785
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 786 irhkleteikgrqdleKNGaRNNDELDKL--RQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL 863
Cdd:COG3883 97 ----------------RSG-GSVSYLDVLlgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 864 NDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQD 943
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 944 LKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEI 1023
Cdd:COG3883 240 AAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGA 319
|
330 340
....*....|....*....|....*....
gi 1767287514 1024 DIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1052
Cdd:COG3883 320 GAVVGGASAGGGGGSGGGGGSSGGGSGGG 348
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
715-1464 |
3.25e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 55.88 E-value: 3.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 715 YSDDIRRNIQKDLDDLREKYDRVHTDNEKILG-----ELEHAQKAAHLAEQQlKEIKIQRDDYQKQKDEHARhlfdIRHK 789
Cdd:pfam05483 61 YQEGLKDSDFENSEGLSRLYSKLYKEAEKIKKwkvsiEAELKQKENKLQENR-KIIEAQRKAIQELQFENEK----VSLK 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 790 LETEIKGRQDLEKNGARNNDELDKLRQT-------ISDYESQINLLRR----HNDELDTTIKGHQGKITHLEN---ELHS 855
Cdd:pfam05483 136 LEEEIQENKDLIKENNATRHLCNLLKETcarsaekTKKYEYEREETRQvymdLNNNIEKMILAFEELRVQAENarlEMHF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 856 RSGE-IEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLN 934
Cdd:pfam05483 216 KLKEdHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLT 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 935 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgDRSSVADPSRTRGAAGSTVFVPAaed 1014
Cdd:pfam05483 296 KELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTE------------------EKEAQMEELNKAKAAHSFVVTEF--- 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1015 iesrgggEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKirevndRWKRELERLE 1094
Cdd:pfam05483 355 -------EATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELK------KILAEDEKLL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1095 NEKDDLERRIREL---EDELSQIGRGNDKTEND-------ITELKRKHAAEIDKLKSDisaLHDKHLSDLDDEKEQYGKA 1164
Cdd:pfam05483 422 DEKKQFEKIAEELkgkEQELIFLLQAREKEIHDleiqltaIKTSEEHYLKEVEDLKTE---LEKEKLKNIELTAHCDKLL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1165 VENlKSVEDDLRDKLNNLEKQLADSLNRENELEREKRdydeKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1244
Cdd:pfam05483 499 LEN-KELTQEASDMTLELKKHQEDIINCKKQEERMLK----QIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1245 EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLtsqvrHLEDELADTKGNLVQKEMDLESTQNRLRSLEdqhs 1324
Cdd:pfam05483 574 NARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEEL-----HQENKALKKKGSAENKQLNAYEIKVNKLELE---- 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1325 tLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEkerlQNAFREKTKQadHLN 1404
Cdd:pfam05483 645 -LASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAE----MVALMEKHKH--QYD 717
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1405 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1464
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1834-2014 |
3.58e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 3.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1834 RQILTEKI-KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN---- 1908
Cdd:COG4717 44 RAMLLERLeKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklek 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1909 -----GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRF----LSVEKVVNTMRTTETD 1979
Cdd:COG4717 124 llqllPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLeqlsLATEEELQDLAEELEE 203
|
170 180 190
....*....|....*....|....*....|....*
gi 1767287514 1980 LRQQLETAKNEKRVATKELEDLKRRLAQLENERRN 2014
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1089-1522 |
3.63e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.82 E-value: 3.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRELEDELSQ----IGRGNDKTEN---DITEL------KRKHAAEIDK-LKSDISALHDKH--LS 1152
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEEcrvaAQAHNEEAESlreDADDLeeraeeLREEAAELESeLEEAREAVEDRReeIE 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1153 DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINslygQNQKIKDEWDDFRNDADKEI 1232
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVE----EAEALLEAGKCPECGQPVEG 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1233 QKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVndhtskvrDLTSQVRHLEDELADTKGNLVQKEMDLEST 1312
Cdd:PRK02224 464 SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLV--------EAEDRIERLEERREDLEELIAERRETIEEK 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1313 QNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAKTEKERLQNa 1392
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI----ESLERIRTLLAAIADAEDEIER- 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1393 FREKTKQADHLNQlasQFDTKLTKLRNELQDTNDKLitsDTER-NALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDLA 1471
Cdd:PRK02224 611 LREKREALAELND---ERRERLAEKRERKRELEAEF---DEARiEEAREDKERAEEYL----EQVEEKLDELREERDDLQ 680
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1472 HSHRVSEDSrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1522
Cdd:PRK02224 681 AEIGAVENE-LEELEELRERREALENRVEALEALYDEAEELESMYGDLRAE 730
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
659-1432 |
3.77e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.83 E-value: 3.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 659 EFKTRIDELNRRVENLLRENNRLKSevnpLKDKYRDLENEYNSTQRRIEEkeTQIRYSDDIRRNIQKDldDLREKYDRVH 738
Cdd:TIGR01612 386 EFLEEIKKIAKQRAIFFYNAKKLKH----LEILYKHQEDILNNFHKTIER--LIFEKPDPNNNNIFKD--DFDEFNKPIP 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 739 TDNEKILgelehAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgarnnDELDKLRQTI 818
Cdd:TIGR01612 458 KSKLKAL-----EKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKLILMRMKDFKDIIDFMELYKP-----DEVPSKNIIG 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 819 SDYESQINLLRRhnDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 898
Cdd:TIGR01612 528 FDIDQNIKAKLY--KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLEL 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 899 ENELEKLRNENKEL-----VGKEARARDAANQQLSRANLLNKELEDTKQDLKHST---DVNKQLEQDIRDLKERLANIGK 970
Cdd:TIGR01612 606 KEKIKNISDKNEYIkkaidLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTiksELSKIYEDDIDALYNELSSIVK 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 971 GGRIsrDSTTgtDGGAFGDRSSVADPSRTRGAAGSTVFVPA-AEDIESRGGGEID-IPSSGDVIHGrdgrdgrDAGNRGT 1048
Cdd:TIGR01612 686 ENAI--DNTE--DKAKLDDLKSKIDKEYDKIQNMETATVELhLSNIENKKNELLDiIVEIKKHIHG-------EINKDLN 754
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1049 HTITNTKERIERIEKNILD-RYHDDEL--VEHKIREVNDRWKRELErLENEKDDLERRIRELEDELSQ-IGRGNDKTEND 1124
Cdd:TIGR01612 755 KILEDFKNKEKELSNKINDyAKEKDELnkYKSKISEIKNHYNDQIN-IDNIKDEDAKQNYDKSKEYIKtISIKEDEIFKI 833
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1125 ITELKRKHAAEIDKLKSDISaLHDKHLSDLDDEKEQYGKAVENLKSVEDDlrDKLNNLEKQLADSLNRENELEREKRDYD 1204
Cdd:TIGR01612 834 INEMKFMKDDFLNKVDKFIN-FENNCKEKIDSEHEQFAELTNKIKAEISD--DKLNDYEKKFNDSKSLINEINKSIEEEY 910
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1205 EKINSLYGQNQKIK------DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTK--TVND 1276
Cdd:TIGR01612 911 QNINTLKKVDEYIKicentkESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKdaSLND 990
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1277 HTSKVRDLTSQVRHLEDELADTKGNLVQKEMD--LESTQNRLRSLEDQ-----------HSTLQSDANKWRGEL--DAAL 1341
Cdd:TIGR01612 991 YEAKNNELIKYFNDLKANLGKNKENMLYHQFDekEKATNDIEQKIEDAnknipnieiaiHTSIYNIIDEIEKEIgkNIEL 1070
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1342 RENDILKSNNTNMeTDLTRLKNRLK-------------SAEDALKELKNSLSHAKTEKERLQNAFRE-KTKQADHLNQLA 1407
Cdd:TIGR01612 1071 LNKEILEEAEINI-TNFNEIKEKLKhynfddfgkeeniKYADEINKIKDDIKNLDQKIDHHIKALEEiKKKSENYIDEIK 1149
|
810 820
....*....|....*....|....*
gi 1767287514 1408 SQFdtkltklrNELQDTNDKLITSD 1432
Cdd:TIGR01612 1150 AQI--------NDLEDVADKAISND 1166
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
435-901 |
3.87e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.71 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 435 EGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTR 514
Cdd:COG1196 301 EQDIARLEERRRELEERLEE---LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 515 SlspgktplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 594
Cdd:COG1196 378 E-----------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 595 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST----------------------------------- 639
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAArllllleaeadyegflegvkaalllaglrglagav 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 640 ----DDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN--------------RLKSEVNPLKDKYRDLENEYNS 701
Cdd:COG1196 527 avliGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflpldkiraRAALAAALARGAIGAAVDLVAS 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 702 TQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHAR 781
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 782 HLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-----------KITHLE 850
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEeealeelpeppDLEELE 766
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 851 NELHSRSGEIEKLNDLN-------QRLQKEKQDILNQKLKLDGDVQALKETIRKLENE 901
Cdd:COG1196 767 RELERLEREIEALGPVNllaieeyEELEERYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1719-2139 |
4.06e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.51 E-value: 4.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1719 EEERRALESRLQSAKTLLRSQ-----EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTdldnahTDIR 1793
Cdd:pfam15921 244 EDQLEALKSESQNKIELLLQQhqdriEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNS------MYMR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1794 SLRDKEeqwdSSRFQLETKMRESdsdtnkyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDltkAE 1873
Cdd:pfam15921 318 QLSDLE----STVSQLRSELREA-----------------KRMYEDKIEELEKQLVLANSELTEARTERDQFSQE---SG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1874 SVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNnrvSELQRQLQdan 1953
Cdd:pfam15921 374 NLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---SECQGQME--- 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1954 TEKNRVEDRFLSVEKVvntmrtteTDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGwkkekitllkki 2033
Cdd:pfam15921 448 RQMAAIQGKNESLEKV--------SSLTAQLESTKEMLR---KVVEELTAKKMTLESSERTVSDLTAS------------ 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2034 elLENEKRRTDAAIRETALQREAIEKSLNAMER-ENKELYKNCAQLQQQIAQLEMENGNRILELTNKQRE-------EQE 2105
Cdd:pfam15921 505 --LQEKERAIEATNAEITKLRSRVDLKLQELQHlKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIEnmtqlvgQHG 582
|
410 420 430
....*....|....*....|....*....|....
gi 1767287514 2106 RQLIRMRQEKGQIEKVIENReRTHRNRIKQLEDQ 2139
Cdd:pfam15921 583 RTAGAMQVEKAQLEKEINDR-RLELQEFKILKDK 615
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1672-2124 |
6.14e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.18 E-value: 6.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1672 KIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR 1751
Cdd:pfam01576 132 KIKKLEEDILLLEDQNSKLSKERK-------LLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1752 QMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFE 1831
Cdd:pfam01576 205 ELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESER 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1832 SERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtSHEYQL-------------LKD 1898
Cdd:pfam01576 285 AARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETR-SHEAQLqemrqkhtqaleeLTE 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1899 QLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTeknrvedRFLSVEKVVNTMRTTET 1978
Cdd:pfam01576 364 QLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQA-------RLSESERQRAELAEKLS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1979 DLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE 2058
Cdd:pfam01576 437 KLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVE 516
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 2059 KSLNAMERENKELYKNCAQLQQQIAQLE--MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIEN 2124
Cdd:pfam01576 517 RQLSTLQAQLSDMKKKLEEDAGTLEALEegKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDD 584
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1718-1965 |
6.37e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 6.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1718 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR- 1796
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRa 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1797 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFEserqiltekikELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVE 1876
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFL-----------DAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1877 NELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELlnvRSEVRDYKQRVHDVNNRVSELQRQLQDANTEK 1956
Cdd:COG4942 167 AELEAERA-------ELEALLAELEEERAALEALKAERQKLLARL---EKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1767287514 1957 NRVEDRFLS 1965
Cdd:COG4942 237 AAAAERTPA 245
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1089-1457 |
6.50e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 54.75 E-value: 6.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRE----LEDELSQIGRGNDKTENDITELKRKHAAEIDKLKsdisaLHDKHLSDLDDEKEQYGKA 1164
Cdd:pfam05557 87 ALNKKLNEKESQLADAREviscLKNELSELRRQIQRAELELQSTNSELEELQERLD-----LLKAKASEAEQLRQNLEKQ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1165 VENLKSVEDDLRDKLNNLEKQLADSLNREN---------ELEREK---RDYDEKINSLYGQNQKIKDEWDDFRNDADKEI 1232
Cdd:pfam05557 162 QSSLAEAEQRIKELEFEIQSQEQDSEIVKNskselaripELEKELerlREHNKHLNENIENKLLLKEEVEDLKRKLEREE 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1233 QkwktdaytVRSEAKALETTNTALKAQLQ-----------------AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEL 1295
Cdd:pfam05557 242 K--------YREEAATLELEKEKLEQELQswvklaqdtglnlrspeDLSRRIEQLQQREIVLKEENSSLTSSARQLEKAR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1296 ADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdankwrgELDAALRENDILKSNNTNMETDLT------RLKNRLKSAE 1369
Cdd:pfam05557 314 RELEQELAQYLKKIEDLNKKLKRHKALVRRLQR-------RVLLLTKERDGYRAILESYDKELTmsnyspQLLERIEEAE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1370 DALKELKNSLSHAKTekeRLQNAFREKTKQadhlNQLASQFDTKLTKLRNElQDTNDKLITSDtERNALRNELQKLSQEL 1449
Cdd:pfam05557 387 DMTQKMQAHNEEMEA---QLSVAEEELGGY----KQQAQTLERELQALRQQ-ESLADPSYSKE-EVDSLRRKLETLELER 457
|
....*...
gi 1767287514 1450 KFGNEQIQ 1457
Cdd:pfam05557 458 QRLREQKN 465
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1120-2014 |
7.16e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.98 E-value: 7.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1120 KTENDITELKRKHAAEIDKLKSDISAlhdkhlsdlDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1199
Cdd:pfam02463 181 ETENLAELIIDLEELKLQELKLKEQA---------KKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1200 KrdyDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVN---D 1276
Cdd:pfam02463 252 E---IESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKkaeK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1277 HTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMET 1356
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQ 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1357 DLTRLKNRLKsaEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERN 1436
Cdd:pfam02463 409 LLLELARQLE--DLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1437 ALRNELQKLsQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEArkyeiNDLTSRLDSTEQRLATLQQDY 1516
Cdd:pfam02463 487 ELLLSRQKL-EERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVE-----NYKVAISTAVIVEVSATADEV 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1517 IKADSERDILSDALRRFQSsaNRVINFHTFVDGGAGYVDGVpggtsvigggpsaqrsgayDPSSGGVIGSGISGGPGGSD 1596
Cdd:pfam02463 561 EERQKLVRALTELPLGARK--LRLLIPKLKLPLKSIAVLEI-------------------DPILNLAQLDKATLEADEDD 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1597 FGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKL 1676
Cdd:pfam02463 620 KRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1677 EMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQ-------RDEE 1749
Cdd:pfam02463 700 EIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSElslkekeLAEE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1750 RRQMKSKMVAAELQARGKEAQlrhlneqlknlrtdldnahtdiRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLqias 1829
Cdd:pfam02463 780 REKTEKLKVEEEKEEKLKAQE----------------------EELRALEEELKEEAELLEEEQLLIEQEEKIKEE---- 833
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1830 fESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQ--NEL 1907
Cdd:pfam02463 834 -ELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQklNLL 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1908 NGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQ-LQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLET 1986
Cdd:pfam02463 913 EEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNK 992
|
890 900
....*....|....*....|....*...
gi 1767287514 1987 AKNEKRVATKELEDLKRRLAQLENERRN 2014
Cdd:pfam02463 993 DELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
478-853 |
7.59e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.67 E-value: 7.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 478 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK-RTRSLSPGKTPLPPSE------ALRAVRNTFRNKDNDIQQLERKL 550
Cdd:TIGR00606 688 QTEAELQEFISDLQSKLRLAPDKLKSTESELKKKeKRRDEMLGLAPGRQSIidlkekEIPELRNKLQKVNRDIQRLKNDI 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 551 KIAESQVKEFLNKFENADEAR------RRLDKQFADAKREI---------SNLQKSVDEAERNSRRTDDKLRASEAErva 615
Cdd:TIGR00606 768 EEQETLLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIaqqaaklqgSDLDRTVQQVNQEKQEKQHELDTVVSK--- 844
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 616 AEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 695
Cdd:TIGR00606 845 IELNRKLIQDQQEQIQH--LKSKTNELKSEKLQIGTNLQRRQQ-FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 696 ENEynsTQRRIEEKETQIRYSDDIRRNIQKDLDDLR------EKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 769
Cdd:TIGR00606 922 QQE---KEELISSKETSNKKAQDKVNDIKEKVKNIHgymkdiENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINE 998
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 770 DDYQKQKDEHARHLFD-------IRHKLETEIKGRQDLEKN--GARNNDELDKLRQTISDYESQINLLRRHNDELDTTIK 840
Cdd:TIGR00606 999 DMRLMRQDIDTQKIQErwlqdnlTLRKRENELKEVEEELKQhlKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQK 1078
|
410
....*....|...
gi 1767287514 841 GHQGKITHLENEL 853
Cdd:TIGR00606 1079 GYEKEIKHFKKEL 1091
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1655-2054 |
9.13e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 9.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1655 GGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQ-KETRYRNIEDNLQDAEEERRALesrLQSAK 1733
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElKKAKGKCPVCGRELTEEHRKEL---LEEYT 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1734 TLLRSQEEALKQRDEERRQMKSKMVAAE--LQARGKEAQLRHLNEQLKNLRTDLDNahTDIRSLRDKEEQWdssrfqlet 1811
Cdd:PRK03918 459 AELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKK--YNLEELEKKAEEY--------- 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1812 kmRESDSDTNKYQLQIASFESErqilTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA--ESVEnELRKTIDIQSKT 1889
Cdd:PRK03918 528 --EKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKELEELgfESVE-ELEERLKELEPF 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1890 SHEYQLLKdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDanTEKNRVEDRFLSVEKV 1969
Cdd:PRK03918 601 YNEYLELK----DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRE 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1970 VntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLsdgwkkEKItlLKKIELLENEKRRTDAAIRE 2049
Cdd:PRK03918 675 L-------AGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKL------EKA--LERVEELREKVKKYKALLKE 739
|
....*
gi 1767287514 2050 TALQR 2054
Cdd:PRK03918 740 RALSK 744
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1715-1938 |
9.49e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.54 E-value: 9.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1715 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR--QMKSKMVAAELQARGKEAQLRHLNEQLKnlrtDLDNAHTDI 1792
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAELE----RLDASSDDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1793 RSLRDKEEQWdssrfqletkmresdsdtnkyqlqiasfESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1872
Cdd:COG4913 688 AALEEQLEEL----------------------------EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 1873 ES-VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSE-VRDYKQRVHDV 1938
Cdd:COG4913 740 EDlARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADL 807
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
401-794 |
9.85e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 9.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 401 IETIKRMNGTGGAGSASSADLLEELRKIRGGG---SSEGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELR 477
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAKGKCpvcGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELR 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 478 RNREKLNEaQGALKKLHEMAqDSEKNVDGTVSIKRTRSLSPGktplppSEALRAVRNTFRNKDNDIQQLERKLKiaesQV 557
Cdd:PRK03918 484 ELEKVLKK-ESELIKLKELA-EQLKELEEKLKKYNLEELEKK------AEEYEKLKEKLIKLKGEIKSLKKELE----KL 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 558 KEFLNKFENADEARRRLDKQFADAKREISNLQ-KSVDEAERNSRRtddkLRASEAERVAAEKARKFLEDELAKLQasfqk 636
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKE----LEPFYNEYLELKDAEKELEREEKELK----- 622
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 637 sstddarKLRDEMDEHTNSIQEEFKtRIDELNRRVENLLRENNrlksevnplKDKYRDLENEYNSTQRRIEEKETQIRYS 716
Cdd:PRK03918 623 -------KLEEELDKAFEELAETEK-RLEELRKELEELEKKYS---------EEEYEELREEYLELSRELAGLRAELEEL 685
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 717 DDIRRNIQKDLDDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEI 794
Cdd:PRK03918 686 EKRREEIKKTLEKLKEE-----------LEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1659-2143 |
9.88e-07 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 54.44 E-value: 9.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1659 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTT------INQKETRYRNIEDNLQDAEEERRALESrlqSA 1732
Cdd:pfam10174 187 IAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKTkalqtvIEMKDTKISSLERNIRDLEDEVQMLKT---NG 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1733 KTLLRSQEEALKQRDEERRQ---MKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA--HTDI--RSLRDKEE----- 1800
Cdd:pfam10174 264 LLHTEDREEEIKQMEVYKSHskfMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCkqHIEVlkESLTAKEQraail 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1801 --QWDSSRFQLETKmresDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1878
Cdd:pfam10174 344 qtEVDALRLRLEEK----ESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAG 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1879 LRKTI-DIQSKTSHeyqllKDQLLNTQNELNGANNR-----KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA 1952
Cdd:pfam10174 420 LKERVkSLQTDSSN-----TDTALTTLEEALSEKERiierlKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEK 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1953 NTEKN--------------RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKElEDLKRRLAQLENERRNSSQL 2018
Cdd:pfam10174 495 ESSLIdlkehasslassglKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTN-PEINDRIRLLEQEVARYKEE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2019 SDGWKKEKITLLKKIELLENEKRRTDAAIRE-------------------TALQREAIEKSLNAME---RENKELYKNCA 2076
Cdd:pfam10174 574 SGKAQAEVERLLGILREVENEKNDKDKKIAElesltlrqmkeqnkkvaniKHGQQEMKKKGAQLLEearRREDNLADNSQ 653
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 2077 QLQQQIAQLEMENGNRILELTnKQR--------EEQERQLIRMRQE-KGQIEKVIENRERTHRNRIKQLEDQIAIL 2143
Cdd:pfam10174 654 QLQLEELMGALEKTRQELDAT-KARlsstqqslAEKDGHLTNLRAErRKQLEEILEMKQEALLAAISEKDANIALL 728
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
257-936 |
1.01e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 257 EERRRSDEYRMQWENERQKSLSLED--ENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRK 334
Cdd:PTZ00121 1312 EEAKKADEAKKKAEEAKKKADAAKKkaEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 335 QFSDLKTHTEEDldKQKAEFTR----AIRNVNNISRNAAFSAGAGDglglygLEDGGDVNRTTNNYEKVFIETIKRMNGT 410
Cdd:PTZ00121 1392 KADEAKKKAEED--KKKADELKkaaaAKKKADEAKKKAEEKKKADE------AKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 411 GGAGSASSADLL----EELRKIRGGGSSEGDAELHKELMTKYEESIERNIEL----ESRGDDSQRKIAEL-EAELRRNRE 481
Cdd:PTZ00121 1464 KKAEEAKKADEAkkkaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAkkaeEAKKADEAKKAEEAkKADEAKKAE 1543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 482 KLNEAQgALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTP-LPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVK- 558
Cdd:PTZ00121 1544 EKKKAD-ELKKAEELKKAEEkKKAEEAKKAEEDKNMALRKAEeAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKa 1622
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 559 EFLNKFENADEARRRLDKQFADAKREISNLQKsvdEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSs 638
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKK---AEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEA- 1698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 639 tDDARKLrdemdehtnsiqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRdlENEYNSTQRRIEEKEtqirysdd 718
Cdd:PTZ00121 1699 -EEAKKA------------EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE--EDKKKAEEAKKDEEE-------- 1755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 719 iRRNIQKDLDDLREKYDRVHTDNEKILGE--LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKG 796
Cdd:PTZ00121 1756 -KKKIAHLKKEEEKKAEEIRKEKEAVIEEelDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKE 1834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 797 RQD-----------LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHsrsgeieklnd 865
Cdd:PTZ00121 1835 VADsknmqleeadaFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIP----------- 1903
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 866 lNQRLQKEKQDILNQKLKLDgdvQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE 936
Cdd:PTZ00121 1904 -NNNMAGKNNDIIDDKLDKD---EYIKRDAEETREEIIKISKKDMCINDFSSKFCDYMKDNISSGNCSDEE 1970
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1071-1462 |
1.12e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 53.53 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1071 DDELVEHKIREVNDRWkRELERL-----------ENEKDDLER---RIRELEDELSQIGRGNDKTENDITELKRKHAAei 1136
Cdd:pfam19220 4 RNELLRVRLGEMADRL-EDLRSLkadfsqliepiEAILRELPQaksRLLELEALLAQERAAYGKLRRELAGLTRRLSA-- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1137 dkLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSlygqnqk 1216
Cdd:pfam19220 81 --AEGELEEL-VARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQA------- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1217 ikdewddfrndADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1296
Cdd:pfam19220 151 -----------AEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1297 DTKG----NLVQKEMDLESTQNRLRSLEDQHSTLQSDAN---KWRGELDAALREND--ILKSNNTNMETDLTRlknrlKS 1367
Cdd:pfam19220 220 AEQAererAEAQLEEAVEAHRAERASLRMKLEALTARAAateQLLAEARNQLRDRDeaIRAAERRLKEASIER-----DT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1368 AEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ 1447
Cdd:pfam19220 295 LERRLAGLEADLERRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKRFEVERAALEQANR 374
|
410
....*....|....*
gi 1767287514 1448 ELKfgnEQIQRKSDE 1462
Cdd:pfam19220 375 RLK---EELQRERAE 386
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
662-830 |
1.16e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.85 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 662 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIrysDDIRRNIQKDlddlREKYDRVHTDN 741
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI---EEVEARIKKY----EEQLGNVRNNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 742 E--KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgRQDLEKNGARNNDELDKLRQTIS 819
Cdd:COG1579 90 EyeALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK---KAELDEELAELEAELEELEAERE 166
|
170
....*....|...
gi 1767287514 820 DYESQI--NLLRR 830
Cdd:COG1579 167 ELAAKIppELLAL 179
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1182-1490 |
1.17e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 53.75 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1182 LEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQ 1261
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1262 AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAAL 1341
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1342 RENDILKSNNTNMET-------DLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFD--- 1411
Cdd:pfam07888 192 KEFQELRNSLAQRDTqvlqlqdTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDrtq 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1412 TKLTKLRNELQDTNDKLITSD-----------TERNALRN-------ELQKLSQELKFGNEQIQRKSDEYQTTIDDLAH- 1472
Cdd:pfam07888 272 AELHQARLQAAQLTLQLADASlalregrarwaQERETLQQsaeadkdRIEKLSAELQRLEERLQEERMEREKLEVELGRe 351
|
330 340
....*....|....*....|
gi 1767287514 1473 --SHRVSEDSRLNALQELEA 1490
Cdd:pfam07888 352 kdCNRVQLSESRRELQELKA 371
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1709-1918 |
1.27e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.87 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1709 RNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdeERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA 1788
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAAL-----EEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1789 HTDIRSLRDKEEQWDSSRFQLetkmrESDSDTNKYQLQIASFESERQILT--------------EKIKELDGALR-LSDS 1853
Cdd:COG3206 239 EARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSarytpnhpdvialrAQIAALRAQLQqEAQR 313
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1854 KVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1918
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1660-2137 |
1.33e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.97 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1660 ANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINqketryrNIEDNLQDAEEERRALESRLQSAKTllrsq 1739
Cdd:pfam15921 373 GNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITID-------HLRRELDDRNMEVQRLEALLKAMKS----- 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1740 eealkqrdEERRQMKSKMVAAElqarGKEAQLrhlnEQLKNLRTDLDNAHtdiRSLRDKEEQWDSSRFQLETKMRESDSD 1819
Cdd:pfam15921 441 --------ECQGQMERQMAAIQ----GKNESL----EKVSSLTAQLESTK---EMLRKVVEELTAKKMTLESSERTVSDL 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1820 TNKYQlqiasfESERQI--LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELrktidiqSKTSHEYQLLK 1897
Cdd:pfam15921 502 TASLQ------EKERAIeaTNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQM-------AEKDKVIEILR 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLLNtQNELNGANNR--------KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 1969
Cdd:pfam15921 569 QQIEN-MTQLVGQHGRtagamqveKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRA 647
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1970 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRrlaqleNERRNSSQLSDGWKKEKITL---LKKIELLENEKRRTDAA 2046
Cdd:pfam15921 648 VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKR------NFRNKSEEMETTTNKLKMQLksaQSELEQTRNTLKSMEGS 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2047 IRETALQREAIEKSLNAMERENKELykncaQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIE---KVIE 2123
Cdd:pfam15921 722 DGHAMKVAMGMQKQITAKRGQIDAL-----QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAgelEVLR 796
|
490
....*....|....
gi 1767287514 2124 NRERTHRNRIKQLE 2137
Cdd:pfam15921 797 SQERRLKEKVANME 810
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1658-2081 |
1.41e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1737
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1738 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1817
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1818 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKV----------QDMKDDTDKLRRDLTKAESVENELRKTIDIQS 1887
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELaeaaarllllLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1888 KTSHEY-----------------------------QLLKDQLLN----------TQNELNGANNRKQQLENELLNVRSEV 1928
Cdd:COG1196 529 LIGVEAayeaaleaalaaalqnivveddevaaaaiEYLKAAKAGratflpldkiRARAALAAALARGAIGAAVDLVASDL 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1929 RDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTM-------RTTETDLRQQLETAKNEKRVATKELEDL 2001
Cdd:COG1196 609 READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGeggsaggSLTGGSRRELLAALLEAEAELEELAERL 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2002 KRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQ 2081
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
663-920 |
1.86e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 663 RIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKydrvhtdne 742
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE--------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 743 kilgelehaqkaahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYE 822
Cdd:COG4942 92 ---------------IAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 902
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|....*...
gi 1767287514 903 EKLRNENKELVGKEARAR 920
Cdd:COG4942 237 AAAAERTPAAGFAALKGK 254
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1088-1539 |
2.15e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 2.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1088 RELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA----AEIDKLKSDISALH-------------DKH 1150
Cdd:COG4913 288 RRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLEreleererrrarlEAL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1151 LSDLD----DEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRN 1226
Cdd:COG4913 368 LAALGlplpASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRD 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1227 DADKEIQKWKTDAY------TVRSEAK----ALETT--NTAL-----KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--- 1286
Cdd:COG4913 448 ALAEALGLDEAELPfvgeliEVRPEEErwrgAIERVlgGFALtllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPdpe 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1287 QVRHLEDELA---DTKGN--------LVQKEMDLESTQNrLRSLEDQH----STLQSDANKWRGELDA--ALRENDILKS 1349
Cdd:COG4913 528 RPRLDPDSLAgklDFKPHpfrawleaELGRRFDYVCVDS-PEELRRHPraitRAGQVKGNGTRHEKDDrrRIRSRYVLGF 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1350 NNtnmetdltrlKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQF---------DTKLTKLRNE 1420
Cdd:COG4913 607 DN----------RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEAE 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1421 LQD---TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHS----HRVSEDSRLNALQELEARKY 1493
Cdd:COG4913 677 LERldaSSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqdrlEAAEDLARLELRALLEERFA 756
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1767287514 1494 EINDltsrlDSTEQRL-ATLQQDYIKADSERDILSDALRRFQSSANR 1539
Cdd:COG4913 757 AALG-----DAVERELrENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
690-923 |
2.48e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 690 DKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 769
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 770 DDYQKQKDEHARHLFDIrhkleteikGRQDLEKNGARNNDELDKLR-----QTISDY-ESQINLLRRHNDELDTTIKGHQ 843
Cdd:COG4942 100 EAQKEELAELLRALYRL---------GRQPPLALLLSPEDFLDAVRrlqylKYLAPArREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 844 GKITHLENELHSRSGEIEKLndlnQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAA 923
Cdd:COG4942 171 AERAELEALLAELEEERAAL----EALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1091-2070 |
2.55e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.13 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1091 ERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKrKHAAEIDKLKSDISALHDKHLSDLDDE-KEQYGKAVENLK 1169
Cdd:TIGR00606 241 KSYENELDPLKNRLKEIEHNLSKI----MKLDNEIKALK-SRKKQMEKDNSELELKMEKVFQGTDEQlNDLYHNHQRTVR 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1170 SVEDDLRDKLNNLEKqladsLNRE-NELEREKRDYDEKINSLYGQNQKIKDEWDDFrndaDKEIQKWKTdaytvRSEAKA 1248
Cdd:TIGR00606 316 EKERELVDCQRELEK-----LNKErRLLNQEKTELLVEQGRLQLQADRHQEHIRAR----DSLIQSLAT-----RLELDG 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1249 LE-------TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED 1321
Cdd:TIGR00606 382 FErgpfserQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIK 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1322 QHSTLQSDANKWRgELDAALRENDI---LKSNNTNMETDLTRLKNRLKSAEDALKELKN------SLSHAKTEKERLQNA 1392
Cdd:TIGR00606 462 ELQQLEGSSDRIL-ELDQELRKAERelsKAEKNSLTETLKKEVKSLQNEKADLDRKLRKldqemeQLNHHTTTRTQMEML 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1393 FREKTKQADHLNQLASQFDTKLTKLrneLQDTNDKLITSDTernalrneLQKLSQELKFGNEQIQRKSDEYQtTIDDLAH 1472
Cdd:TIGR00606 541 TKDKMDKDEQIRKIKSRHSDELTSL---LGYFPNKKQLEDW--------LHSKSKEINQTRDRLAKLNKELA-SLEQNKN 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1473 SHRVSEDSRLNALQELEARKYEIndltSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSsanrvinfhtfvdggag 1552
Cdd:TIGR00606 609 HINNELESKEEQLSSYEDKLFDV----CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQ----------------- 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1553 YVDGVPGGTSviGGGPSAQRsgaydpssggvigsgisggpggsDFGREIEIGRGDSDQSDVAypRSVPfppsadfssgrp 1632
Cdd:TIGR00606 668 FITQLTDENQ--SCCPVCQR-----------------------VFQTEAELQEFISDLQSKL--RLAP------------ 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1633 gaasaggrviNNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIE 1712
Cdd:TIGR00606 709 ----------DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIM 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1713 DNLQDAEEerralesrLQSAKTLLRSQEEALKQRDEERRQMkskmvAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDI 1792
Cdd:TIGR00606 779 PEEESAKV--------CLTDVTIMERFQMELKDVERKIAQQ-----AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKI 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1793 RSLRDKEEQWDSSRFQLETKMRESDSDtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDtdklrrDLTKA 1872
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSE----KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ------DSPLE 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1873 ESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEllnVRSEVRDYKQrvhDVNNRVSELQRQLQDA 1952
Cdd:TIGR00606 916 TFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENK---IQDGKDDYLK---QKETELNTVNAQLEEC 989
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1953 NTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEkrvatKELEDLKRRLAQLENERRNSSQLSDgwKKEKITLLKK 2032
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRE-----NELKEVEEELKQHLKEMGQMQVLQM--KQEHQKLEEN 1062
|
970 980 990
....*....|....*....|....*....|....*...
gi 1767287514 2033 IELLENEKRRTDAAIRETALQREAIEKSLNAMERENKE 2070
Cdd:TIGR00606 1063 IDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1049-1513 |
2.57e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.92 E-value: 2.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1049 HTITNTKERIERIEKNILDRYH-DDELVEHKIREvndrwKRELERLENEKDDLERRIRELEDELSQIgrgNDKTENDITE 1127
Cdd:pfam12128 241 PEFTKLQQEFNTLESAELRLSHlHFGYKSDETLI-----ASRQEERQETSAELNQLLRTLDDQWKEK---RDELNGELSA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1128 LKrkhaAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlrdkLNNLEKQLADSLNRENELERE-------- 1199
Cdd:pfam12128 313 AD----AAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSE----LENLEERLKALTGKHQDVTAKynrrrski 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1200 KRDYDEKINSLYGQNQKIKDEWD---------------DFRNDADKEIQKWKTDAYTVRSEAKALE------TTNTALKA 1258
Cdd:pfam12128 385 KEQNNRDIAGIKDKLAKIREARDrqlavaeddlqalesELREQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1259 QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ--------HSTLQSDA 1330
Cdd:pfam12128 465 QLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1331 NKWRGEL-----DAALRENDILKSNNTNM---ETDLTRLKNRLKSAE-----DALKELKNSLSHAKTEKERLQNAFREKT 1397
Cdd:pfam12128 545 PDWEQSIgkvisPELLHRTDLDPEVWDGSvggELNLYGVKLDLKRIDvpewaASEEELRERLDKAEEALQSAREKQAAAE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1398 KQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDL-AHSHR 1475
Cdd:pfam12128 625 EQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKaLAERKDSANERLNSLEAQLKQLDKKHqAWLEE 704
|
490 500 510
....*....|....*....|....*....|....*...
gi 1767287514 1476 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1513
Cdd:pfam12128 705 QKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARR 742
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1258-1516 |
2.59e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.04 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1258 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE-------------------------DELADTKGNLVQKEMDLEST 1312
Cdd:PRK04863 837 AELRQLNRRRVELERALADHESQEQQQRSQLEQAKeglsalnrllprlnlladetladrvEEIREQLDEAEEAKRFVQQH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1313 QNRLRSLEDQHSTLQSDAnkwrgeldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAK--------T 1384
Cdd:PRK04863 917 GNALAQLEPIVSVLQSDP-----------EQFEQLKQDYQQAQQTQRDAKQQA----FALTEVVQRRAHFSyedaaemlA 981
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1385 EKERLQNAFREKTKQADhlnQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL-KFG-------NEQI 1456
Cdd:PRK04863 982 KNSDLNEKLRQRLEQAE---QERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELqDLGvpadsgaEERA 1058
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1457 QRKSDEyqttIDDLAHSHRvsedSRLNALQElearkyEINDLTSRLDSTEQRLATLQQDY 1516
Cdd:PRK04863 1059 RARRDE----LHARLSANR----SRRNQLEK------QLTFCEAEMDNLTKKLRKLERDY 1104
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1252-1539 |
2.96e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.99 E-value: 2.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1252 TNTALKAQLQAANDRIDHltkTVNDHTSkVRDLTSQVRHLeDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAn 1331
Cdd:PRK11281 37 TEADVQAQLDALNKQKLL---EAEDKLV-QQDLEQTLALL-DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDN- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1332 kwrgelDAALREnDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREktkqadhlNQlasqfd 1411
Cdd:PRK11281 111 ------DEETRE-TLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYA--------NS------ 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1412 TKLTKLRNELQDTND-KLITSDTERNALRNELQKLSQELKF------GNEQIQrksDEYQTTIDDLAHSHRVSEdSRLNA 1484
Cdd:PRK11281 170 QRLQQIRNLLKGGKVgGKALRPSQRVLLQAEQALLNAQNDLqrksleGNTQLQ---DLLQKQRDYLTARIQRLE-HQLQL 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1485 LQELearkyeINDltSRLDSTEQRLATLQQdyikADSERDILSDALRRFQSSANR 1539
Cdd:PRK11281 246 LQEA------INS--KRLTLSEKTVQEAQS----QDEAARIQANPLVAQELEINL 288
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1666-1843 |
3.21e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 50.69 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1666 LQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQ 1745
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDE-------LAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1746 -RDE-ERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDkeeqwdssrfQLETKMRESDSDTNKY 1823
Cdd:COG1579 85 vRNNkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEA----------ELEEKKAELDEELAEL 154
|
170 180
....*....|....*....|
gi 1767287514 1824 QLQIASFESERQILTEKIKE 1843
Cdd:COG1579 155 EAELEELEAEREELAAKIPP 174
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1706-2149 |
3.27e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.73 E-value: 3.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1706 TRYRNIEDNLQ--DAEEER-RALESRLqSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKE-----AQLRHLNEQ 1777
Cdd:PRK02224 150 DRQDMIDDLLQlgKLEEYReRASDARL-GVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESElaeldEEIERYEEQ 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1778 LKNLRTDLDNAHTDIRSLRDKEEQWDSsrfqLETKMRESDSDtnkyqlqIASFESERQILTEKIKELDGAL--------- 1848
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELET----LEAEIEDLRET-------IAETEREREELAEEVRDLRERLeeleeerdd 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1849 RLSDSKVQDMKDDTDKLRRDL--TKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRS 1926
Cdd:PRK02224 298 LLAEAGLDDADAEAVEARREEleDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEARE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1927 EVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATK---------- 1996
Cdd:PRK02224 378 AVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpec 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1997 ------------------ELEDLKRRLAQLENERRNssqlsdgwKKEKITLLKkiELLENEKRRTDAAIRETALQREAIE 2058
Cdd:PRK02224 458 gqpvegsphvetieedreRVEELEAELEDLEEEVEE--------VEERLERAE--DLVEAEDRIERLEERREDLEELIAE 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2059 KSLNAMERENKELYKNCAQLQQQIAQLEMEngnrilELTNKQREEQERQLIRMRQEKGQIEKVIENRERThrNRIKQLED 2138
Cdd:PRK02224 528 RRETIEEKRERAEELRERAAELEAEAEEKR------EAAAEAEEEAEEAREEVAELNSKLAELKERIESL--ERIRTLLA 599
|
490
....*....|.
gi 1767287514 2139 QIAILRDQLDG 2149
Cdd:PRK02224 600 AIADAEDEIER 610
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
457-945 |
3.54e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 3.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 457 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsikrtrslspgktplppsealravrntf 536
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE----------------------------------------- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 537 rnKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD--KQFADAKREISNLQKSVDEaernsrrtddkLRASEAERV 614
Cdd:COG4717 93 --LQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEE-----------LEERLEELR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 615 AAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRD 694
Cdd:COG4717 160 ELEEELEELEAELAELQE--------ELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 695 LENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLREKYDRVHTDNEKILGELEHAQ 752
Cdd:COG4717 232 LENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLFLLLAREKASLGKEAEELQALP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 753 KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEK--NGARNNDELDKLRQ-----TISDYESQI 825
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEelQLEELEQEIAALLAeagveDEEELRAAL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 826 NLLRRHNDEldttikghQGKITHLENELHSRSGEIEKLNDLNQ--RLQKEKQDILNQKLKLDGDVQALKETIRKLENELE 903
Cdd:COG4717 392 EQAEEYQEL--------KEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAELE 463
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1767287514 904 KLRNENK------ELVGKEARARDAAnQQLSRANLLNKELEDTKQDLK 945
Cdd:COG4717 464 QLEEDGElaellqELEELKAELRELA-EEWAALKLALELLEEAREEYR 510
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1084-1544 |
3.63e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.61 E-value: 3.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1084 DRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1163
Cdd:COG4913 341 EQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEA-LAEAEAALRDLRR 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1164 AVENLKSVEDDLRDKLNNLE-------KQLADSLN-RENEL--------------------ER-----------EKRDYD 1204
Cdd:COG4913 420 ELRELEAEIASLERRKSNIParllalrDALAEALGlDEAELpfvgelievrpeeerwrgaiERvlggfaltllvPPEHYA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1205 ---EKINSLYGQN----QKIKDEWDDFRND-------------ADKEIQKW-------KTDAYTVRSEAkALETTNTALK 1257
Cdd:COG4913 500 aalRWVNRLHLRGrlvyERVRTGLPDPERPrldpdslagkldfKPHPFRAWleaelgrRFDYVCVDSPE-ELRRHPRAIT 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1258 AQLQ--------AANDRIDHLTKTV--NDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE--DQHST 1325
Cdd:COG4913 579 RAGQvkgngtrhEKDDRRRIRSRYVlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSW 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1326 LQSDANKWRGELDAALRENDILKSNNtnmeTDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHL-N 1404
Cdd:COG4913 659 DEIDVASAEREIAELEAELERLDASS----DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqD 734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1405 QLASQFDTKLTKLRNELQDTNDKLITSDTE---RNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDS- 1480
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVErelRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESl 814
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1481 -----RLNALQE--LEARKYEINDLtsRLDSTEQRLATLQQDYikADSERDI------LSDALRRFQSSANRVINFH 1544
Cdd:COG4913 815 peylaLLDRLEEdgLPEYEERFKEL--LNENSIEFVADLLSKL--RRAIREIkeridpLNDSLKRIPFGPGRYLRLE 887
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1253-1514 |
3.66e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 51.99 E-value: 3.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1253 NTALKAQLQAANDRIDHLtktvndhtskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLqsdank 1332
Cdd:pfam19220 5 NELLRVRLGEMADRLEDL-----------RSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKL------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1333 wRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdt 1412
Cdd:pfam19220 68 -RRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEE------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1413 KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL--------KFGNE--QIQRKSDEYQTTIDdlAHSHRVSE-DSR 1481
Cdd:pfam19220 140 ENKALREEAQAAEKALQRAEGELATARERLALLEQENrrlqalseEQAAElaELTRRLAELETQLD--ATRARLRAlEGQ 217
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1767287514 1482 LNALQ------------ELEARKYEINDLTSRLDSTEQRLATLQQ 1514
Cdd:pfam19220 218 LAAEQaereraeaqleeAVEAHRAERASLRMKLEALTARAAATEQ 262
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
781-926 |
3.79e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 50.31 E-value: 3.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 781 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN--ELHSRSG 858
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 859 EIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQ 926
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1151-1371 |
4.49e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1151 LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADK 1230
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1231 EIQKwktdAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1310
Cdd:COG4942 109 LLRA----LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1311 STQNRLRSLEDQHSTLQSDANKWRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDA 1371
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAE---LQQEAEELEALIARLEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1293-1540 |
4.65e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1293 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDAL 1372
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1373 KELKNSLShaktekERLQNAFRekTKQADHLNQLASQFD-TKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKF 1451
Cdd:COG4942 100 EAQKEELA------ELLRALYR--LGRQPPLALLLSPEDfLDAVRRLQYLKYLAP-------ARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1452 GNEQIQRKSDEYQTTIDDLahshrvsEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDyikADSERDILSDALR 1531
Cdd:COG4942 165 LRAELEAERAELEALLAEL-------EEERAALEALKAERQKLLARLEKELAELAAELAELQQE---AEELEALIARLEA 234
|
....*....
gi 1767287514 1532 RFQSSANRV 1540
Cdd:COG4942 235 EAAAAAERT 243
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1703-2071 |
5.07e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 5.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1703 QKETRYRNIEDNLQDAEEERRALESRLQsAKTLLRSQEEALKQRDEERRQmKSKMVAAELQARGKEAQLRhlNEQLKNLR 1782
Cdd:pfam01576 23 KAESELKELEKKHQQLCEEKNALQEQLQ-AETELCAEAEEMRARLAARKQ-ELEEILHELESRLEEEEER--SQQLQNEK 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1783 TDLDNAHTDIRSLRDKEEQwDSSRFQLE-----TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1857
Cdd:pfam01576 99 KKMQQHIQDLEEQLDEEEA-ARQKLQLEkvtteAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1858 MKDDTDK-------LRRDLTKAESVENELRK--------TIDIQSKTSHEYQL---LKDQLLNTQNELNGANNRKQQLEN 1919
Cdd:pfam01576 178 LSKLKNKheamisdLEERLKKEEKGRQELEKakrklegeSTDLQEQIAELQAQiaeLRAQLAKKEEELQAALARLEEETA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1920 ELLNVRSEVRdykqrvhDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRtteTDLRQQLETAKNEKRVATK--- 1996
Cdd:pfam01576 258 QKNNALKKIR-------ELEAQISELQEDLESERAARNKAEKQRRDLGEELEALK---TELEDTLDTTAAQQELRSKreq 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1997 ELEDLKRRLAqlENERRNSSQLSDGWKKEKITLLKKIELLENEKRrtdaairetalQREAIEKSLNAMERENKEL 2071
Cdd:pfam01576 328 EVTELKKALE--EETRSHEAQLQEMRQKHTQALEELTEQLEQAKR-----------NKANLEKAKQALESENAEL 389
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1073-1412 |
5.94e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 51.43 E-value: 5.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1073 ELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQigrgndkTENDITELKRKHaaeidklkSDISALHDKHLS 1152
Cdd:pfam07888 51 EAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQ-------SREKHEELEEKY--------KELSASSEELSE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1153 DLDDEKEQYGKAVENLKSVEDDLRD----------KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1222
Cdd:pfam07888 116 EKDALLAQRAAHEARIRELEEDIKTltqrvleretELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1223 DFRN---DADKEIQKWKTDAYTVR---SEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1296
Cdd:pfam07888 196 ELRNslaQRDTQVLQLQDTITTLTqklTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELH 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1297 DTKGNLVQ-----KEMDLESTQNRLRSLEDQHSTLQS-DANKWRGE--------LDAALRENdilKSNNTNMETDLTRLK 1362
Cdd:pfam07888 276 QARLQAAQltlqlADASLALREGRARWAQERETLQQSaEADKDRIEklsaelqrLEERLQEE---RMEREKLEVELGREK 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 1363 --NRLKSAEDA--LKELKNSLSHAKTEKERLQNafrEKTKQADHLNQLASQFDT 1412
Cdd:pfam07888 353 dcNRVQLSESRreLQELKASLRVAQKEKEQLQA---EKQELLEYIRQLEQRLET 403
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1050-1266 |
5.99e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 5.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1050 TITNTKERIERIEKNILDRYHDDELVEHKIREVNDrwkrELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1129
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLK----QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1130 RKHAAEIDKLKSDISA-------------LHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1196
Cdd:COG4942 97 AELEAQKEELAELLRAlyrlgrqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1197 EREKRDYDEKINSLygqnQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR 1266
Cdd:COG4942 177 EALLAELEEERAAL----EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
452-714 |
6.38e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 51.56 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 452 IERNIELESrgDDSQRKIAELEAELRRNREKLNEAQGALKKlhemaqdseknvdgtvsikrtrslspgktplppsealra 531
Cdd:COG3206 162 LEQNLELRR--EEARKALEFLEEQLPELRKELEEAEAALEE--------------------------------------- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 532 vrntFRNKdNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEA 611
Cdd:COG3206 201 ----FRQK-NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAEL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 612 ERVAAEKARKFLED--ELAKLQASFQksstddarKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV---N 686
Cdd:COG3206 276 EAELAELSARYTPNhpDVIALRAQIA--------ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLaelP 347
|
250 260 270
....*....|....*....|....*....|...
gi 1767287514 687 PLKDKYRDLENEYNSTQRRIEE-----KETQIR 714
Cdd:COG3206 348 ELEAELRRLEREVEVARELYESllqrlEEARLA 380
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1196-1538 |
7.12e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 51.36 E-value: 7.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1196 LEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVN 1275
Cdd:pfam10174 245 LERNIRDLEDEVQMLKTNGLLHTED----REEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1276 DHTSKVRDLTSQVRH-------LEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILK 1348
Cdd:pfam10174 321 DCKQHIEVLKESLTAkeqraaiLQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQ 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1349 SNNTNM-------ETDLTRLKNRLKSAED-------ALKELKNSLSHAKTEKERLQNAF----REKTKQADHLNQLASQF 1410
Cdd:pfam10174 401 KKIENLqeqlrdkDKQLAGLKERVKSLQTdssntdtALTTLEEALSEKERIIERLKEQReredRERLEELESLKKENKDL 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1411 DTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAlqelea 1490
Cdd:pfam10174 481 KEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNP------ 554
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1767287514 1491 rkyeinDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1538
Cdd:pfam10174 555 ------EINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKN 596
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
437-823 |
7.31e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 437 DAELHKELMTKYEESIErniELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGT-VSIKRTRS 515
Cdd:PRK02224 336 AAQAHNEEAESLREDAD---DLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDApVDLGNAED 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 516 LspgktplppSEALRAVRNTFRNKDNDiqqLERKLKIAESQVKE---------------------FLNKFENADEARRRL 574
Cdd:PRK02224 413 F---------LEELREERDELREREAE---LEATLRTARERVEEaealleagkcpecgqpvegspHVETIEEDRERVEEL 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 575 DKQFADAKREISNLQKSVDEAE------------RNSRRTDDKLRASEAERVAAEKAR-KFLEDELAKLQASFQKSStDD 641
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEdlveaedrierlEERREDLEELIAERRETIEEKRERaEELRERAAELEAEAEEKR-EA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 ARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLlrenNRLKSEVNPLKDKYRDLEneynstqrRIEEKETQIRYSDDIRR 721
Cdd:PRK02224 560 AAEAEEEAEEAREEVA-ELNSKLAELKERIESL----ERIRTLLAAIADAEDEIE--------RLREKREALAELNDERR 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 722 niqkdlDDLREKYDRVHtdnekilgELEHAQKAAHLAEqqLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 801
Cdd:PRK02224 627 ------ERLAEKRERKR--------ELEAEFDEARIEE--AREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENEL 690
|
410 420
....*....|....*....|..
gi 1767287514 802 KNGARNNDELDKLRQTISDYES 823
Cdd:PRK02224 691 EELEELRERREALENRVEALEA 712
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1078-1515 |
7.74e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 51.26 E-value: 7.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1078 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHdkHL-SDLDD 1156
Cdd:pfam05483 223 KIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKD--HLtKELED 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1157 EKEQYGKAVENLKSVEDDLRdklnnLEKQLADSLNRENELEREkrdydekinslygqnqkikdewddfrndadkEIQKWK 1236
Cdd:pfam05483 301 IKMSLQRSMSTQKALEEDLQ-----IATKTICQLTEEKEAQME-------------------------------ELNKAK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1237 TDAYTVRSEAKA----LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLEST 1312
Cdd:pfam05483 345 AAHSFVVTEFEAttcsLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1313 qnrlRSLEDQHSTLQSDANKWRGELDAalRENDIlksnnTNMETDLTRLKNRLKSAEDALKELKNSLshaktEKERLQNA 1392
Cdd:pfam05483 425 ----KQFEKIAEELKGKEQELIFLLQA--REKEI-----HDLEIQLTAIKTSEEHYLKEVEDLKTEL-----EKEKLKNI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1393 frEKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ-------ELKFGNEQIQRKSDEYQT 1465
Cdd:pfam05483 489 --ELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEkemnlrdELESVREEFIQKGDEVKC 566
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1466 TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1515
Cdd:pfam05483 567 KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1701-2148 |
8.48e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 51.33 E-value: 8.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1701 INQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL----RSQEE---ALKQRDEERRQMKSKMVAAELQARGKEAQLRH 1773
Cdd:pfam01576 491 LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdmkKKLEEdagTLEALEEGKKRLQRELEALTQQLEEKAAAYDK 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1774 LNEQLKNLRTDLDNAHTDIRSLRD----------------KEEQWDSSRFQLETKMRESDSdtNKYQLQIASFESERQIL 1837
Cdd:pfam01576 571 LEKTKNRLQQELDDLLVDLDHQRQlvsnlekkqkkfdqmlAEEKAISARYAEERDRAEAEA--REKETRALSLARALEEA 648
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1838 TEKIKELDGALRLSDSKVQDM---KDDTDKLRRDLTKA---------------ESVENELRKTIDIQSKTSHEYQLLKDQ 1899
Cdd:pfam01576 649 LEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELERSkraleqqveemktqlEELEDELQATEDAKLRLEVNMQALKAQ 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1900 L---LNTQNELNgaNNRKQQLENELLNVRSEVRD-YKQRVHDVNNR------VSELQRQLQDANteKNRVEdrflsVEKV 1969
Cdd:pfam01576 729 FerdLQARDEQG--EEKRRQLVKQVRELEAELEDeRKQRAQAVAAKkkleldLKELEAQIDAAN--KGREE-----AVKQ 799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1970 VNTMRTTETDLRQQLETAK------------NEKRVATKELE--DLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIEL 2035
Cdd:pfam01576 800 LKKLQAQMKDLQRELEEARasrdeilaqskeSEKKLKNLEAEllQLQEDLAASERARRQAQQERDELADEIASGASGKSA 879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2036 LENEKRRTDAAIreTALQREAIEKSLNaMERENKELYKncAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2115
Cdd:pfam01576 880 LQDEKRRLEARI--AQLEEELEEEQSN-TELLNDRLRK--STLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKL 954
|
490 500 510
....*....|....*....|....*....|...
gi 1767287514 2116 GQIEKVIENRertHRNRIKQLEDQIAILRDQLD 2148
Cdd:pfam01576 955 QEMEGTVKSK---FKSSIAALEAKIAQLEEQLE 984
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
457-615 |
9.30e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.15 E-value: 9.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 457 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgTVSIKRTRSlspgktplppSEALRAVRNT- 535
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIE-EVEARIKKY----------EEQLGNVRNNk 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 536 -FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERV 614
Cdd:COG1579 90 eYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
.
gi 1767287514 615 A 615
Cdd:COG1579 170 A 170
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1715-2168 |
1.01e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1715 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGK--EAQLRHLNEQLKNLRTDLDNAHTDI 1792
Cdd:COG4717 83 AEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEalEAELAELPERLEELEERLEELRELE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1793 RSLRDKEEQWDSSRFQLETKMRESDSDTnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1872
Cdd:COG4717 163 EELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1873 ESVE--NELRKTIDIQSkTSHEYQLLKDQLLNTQNELNGAnnrkQQLENELLNVRSEVRDYKQRVHdvNNRVSELQRQLQ 1950
Cdd:COG4717 240 ALEErlKEARLLLLIAA-ALLALLGLGGSLLSLILTIAGV----LFLVLGLLALLFLLLAREKASL--GKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1951 DANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRvatkELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL 2030
Cdd:COG4717 313 LEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR----EAEELEEELQLEELEQEIAALLAEAGVEDEEELR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2031 KKIELLEnekrrtdaairetalQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENgnRILELtNKQREEQERQLIR 2110
Cdd:COG4717 389 AALEQAE---------------EYQELKEELEELEEQLEELLGELEELLEALDEEELEE--ELEEL-EEELEELEEELEE 450
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2111 MRQEKGQIEkvienrerthrNRIKQLE--DQIAILRDQLDGERRRRREYVDRSMVNDIGR 2168
Cdd:COG4717 451 LREELAELE-----------AELEQLEedGELAELLQELEELKAELRELAEEWAALKLAL 499
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1713-2162 |
1.02e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.30 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1713 DNLQDAEEERRALESRLQSAKtllRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRhlnEQLKNLRTDLDNAHTDI 1792
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAK---KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA---AAAKKKADEAKKKAEEK 1430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1793 RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSdSKVQDMKDDTDKLRRDlTKA 1872
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK-KKAEEAKKKADEAKKA-AEA 1508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1873 ESVENELRKTidiqSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE---NELLNVRSEVRDYKQRVHDVNNRVSELQRQL 1949
Cdd:PTZ00121 1509 KKKADEAKKA----EEAKKADEAKKAEEAKKADEAKKAEEKKKADElkkAEELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1950 QDANTEKNRVEDRFLSVEKVvNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2029
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEE-KKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2030 LKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENK--ELYKNCAQLQQQIAQ---LEMENGNRILELtNKQREEQ 2104
Cdd:PTZ00121 1664 AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKaeELKKKEAEEKKKAEElkkAEEENKIKAEEA-KKEAEED 1742
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 2105 ERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLDGERRRRREYVDRSM 2162
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1663-2071 |
1.19e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.94 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1663 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1742
Cdd:pfam01576 200 EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQED 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1743 LkqrdeerrqmkskmvAAELQARGK-EAQLRHLNEQLKNLRTDLD------NAHTDIRSLRDKEEQWDSSRFQLETKMRE 1815
Cdd:pfam01576 280 L---------------ESERAARNKaEKQRRDLGEELEALKTELEdtldttAAQQELRSKREQEVTELKKALEEETRSHE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1816 SDS-----------DTNKYQLQIA-----SFESERQILTEKIKELDGALRLsdskVQDMKDDTDKLRRdltKAESVENEL 1879
Cdd:pfam01576 345 AQLqemrqkhtqalEELTEQLEQAkrnkaNLEKAKQALESENAELQAELRT----LQQAKQDSEHKRK---KLEGQLQEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1880 rktidiQSKTSheyqllkdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRV 1959
Cdd:pfam01576 418 ------QARLS-----------ESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1960 EDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLkrrlaqlenerrnSSQLSDgWKKEKITLLKKIELLENE 2039
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTL-------------QAQLSD-MKKKLEEDAGTLEALEEG 546
|
410 420 430
....*....|....*....|....*....|..
gi 1767287514 2040 KRRTDAAIRETALQREAIEKSLNAMERENKEL 2071
Cdd:pfam01576 547 KKRLQRELEALTQQLEEKAAAYDKLEKTKNRL 578
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1713-2147 |
1.20e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.99 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1713 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaaELQARGKEAQLRH----LNEQLKNLRTDLDNA 1788
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAEL---NQLLRTLDDQWKEkrdeLNGELSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1789 HTDIRSLRDKEEQWDSSRfqLETKMRESD------SDTNKYQLQIASFESERQILTEKIKELDGALRLS-DSKVQDMKDD 1861
Cdd:pfam12128 321 RSELEALEDQHGAFLDAD--IETAAADQEqlpswqSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQnNRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1862 TDKLR--RDLTKA------ESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENELLNVR---SEVRD 1930
Cdd:pfam12128 399 LAKIReaRDRQLAvaeddlQALESELREQLEAGKLEFNEEEY---RLKSRLGELKLRLNQATATPELLLQLEnfdERIER 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1931 YKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNE-KRVATKELEDLKRRLAQLE 2009
Cdd:pfam12128 476 AREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTlLHFLRKEAPDWEQSIGKVI 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2010 NER----------RNSSQLSDGWKKEKITL-LKKIELLE----NEKRRTDAAIRETALQ--REAIEKSLNAMERENKELY 2072
Cdd:pfam12128 556 SPEllhrtdldpeVWDGSVGGELNLYGVKLdLKRIDVPEwaasEEELRERLDKAEEALQsaREKQAAAEEQLVQANGELE 635
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 2073 KncaqlqqqiAQLEMENGNRILEltnKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQL 2147
Cdd:pfam12128 636 K---------ASREETFARTALK---NARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKH 698
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
810-1464 |
1.30e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.61 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENELHSRSgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQ 889
Cdd:pfam12128 242 EFTKLQQEFNTLESAEL-------RLSHLHFGYKSDETLIASRQEERQ---ETSAELNQLLRTLDDQWKEKRDELNGELS 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 890 ALKETIRKLENELEKLRNENK--ELVGKEARARDAANQQLSRANLLNKE-----LEDTKQDLKHSTD-----VNKQLEQD 957
Cdd:pfam12128 312 AADAAVAKDRSELEALEDQHGafLDADIETAAADQEQLPSWQSELENLEerlkaLTGKHQDVTAKYNrrrskIKEQNNRD 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 958 IRDLKERLANIgkggrisRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGE--------------I 1023
Cdd:pfam12128 392 IAGIKDKLAKI-------REARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELklrlnqatatpellL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1024 DIPSSGDVIHGRDGRDGRDAGNRGTHTITNTK---------ERIERIEKNILDRYHDDELVEHKI------------REV 1082
Cdd:pfam12128 465 QLENFDERIERAREEQEAANAEVERLQSELRQarkrrdqasEALRQASRRLEERQSALDELELQLfpqagtllhflrKEA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1083 NDrWKRELERLENE----KDDL--ERRIRELEDELSQIGRGNDKTENDITE---LKRKHAAEIDKLKSDISALHDKHlSD 1153
Cdd:pfam12128 545 PD-WEQSIGKVISPellhRTDLdpEVWDGSVGGELNLYGVKLDLKRIDVPEwaaSEEELRERLDKAEEALQSAREKQ-AA 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1154 LDDEKEQYGKAVEN-----------LKSVEDDLRdKLNNLEKQLADSLNRenELEREKRDYDEKINSLYGQNQKIKDEW- 1221
Cdd:pfam12128 623 AEEQLVQANGELEKasreetfartaLKNARLDLR-RLFDEKQSEKDKKNK--ALAERKDSANERLNSLEAQLKQLDKKHq 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1222 -------DDFRNDADKEIQKWK-----TDAYTVRSEAkALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVR 1289
Cdd:pfam12128 700 awleeqkEQKREARTEKQAYWQvvegaLDAQLALLKA-AIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIR 778
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1290 HLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKwrgeldAALRENDILKSNNTNMETDLTRLKNRLKSAE 1369
Cdd:pfam12128 779 TLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIER------AISELQQQLARLIADTKLRRAKLEMERKASE 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1370 DALKELKNSLSHAKTEKERLqNAFRE--KTKQAD----HLNQLASQFDTKLTKLRNELQD--TNDKLITSDTERNALRNE 1441
Cdd:pfam12128 853 KQQVRLSENLRGLRCEMSKL-ATLKEdaNSEQAQgsigERLAQLEDLKLKRDYLSESVKKyvEHFKNVIADHSGSGLAET 931
|
730 740
....*....|....*....|...
gi 1767287514 1442 LQKLSQELKFGNEQIQRKSDEYQ 1464
Cdd:pfam12128 932 WESLREEDHYQNDKGIRLLDYRK 954
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1075-1207 |
1.31e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.77 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1075 VEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA-------------------AE 1135
Cdd:COG1579 22 LEHRLKEL----PAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKkyeeqlgnvrnnkeyealqKE 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1136 IDKLKSDISALHDKHLS---DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKI 1207
Cdd:COG1579 98 IESLKRRISDLEDEILElmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1364-1540 |
1.32e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1364 RLKSAEDALKELKNSLSH--AKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTER-NALRN 1440
Cdd:COG4913 266 AARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLER 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1441 ELQKLSQELkfgnEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKyeiNDLTSRLDSTEQRLATLQQDYIKAD 1520
Cdd:COG4913 346 EIERLEREL----EERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL---EALEEELEALEEALAEAEAALRDLR 418
|
170 180
....*....|....*....|
gi 1767287514 1521 SERDILSDALRRFQSSANRV 1540
Cdd:COG4913 419 RELRELEAEIASLERRKSNI 438
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1915-2065 |
1.35e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.77 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1915 QQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEK--R 1992
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKeyE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1993 VATKELEDLKRRLAQLENERRN----SSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2065
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILElmerIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
612-1189 |
1.41e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 50.51 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 612 ERVAAEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEhtnsiQEEFKTRIDELNRRvENLLRENNRLKSEVNPLKDK 691
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIEL--EKKASALKRQLDRESDR-----NQELQKRIRLLEKR-EAEAEEALREQAELNRLKKK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 692 YRDleneynSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 771
Cdd:pfam05557 84 YLE------ALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 772 YQKQKDEHARHLFDIRhKLETEIKGRQDLEKNGARNNDELDKlrqtISDYESQINLLRRHNDELDTTIkGHQGKITHLEN 851
Cdd:pfam05557 158 LEKQQSSLAEAEQRIK-ELEFEIQSQEQDSEIVKNSKSELAR----IPELEKELERLREHNKHLNENI-ENKLLLKEEVE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 852 ELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDgdvQALKETIRK---LENELEKLRNENKELVGKEArardAANQ 925
Cdd:pfam05557 232 DLKRKLEREEKYREEAATLELEKEKLeqeLQSWVKLA---QDTGLNLRSpedLSRRIEQLQQREIVLKEENS----SLTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 926 QLSRANLLNKELEDT-KQDLKHSTDVNKQLEQD---IRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRG 1001
Cdd:pfam05557 305 SARQLEKARRELEQElAQYLKKIEDLNKKLKRHkalVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLLERIEE 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1002 AAGSTVFVPAAEDiesrgggeiDIPSSGDVIHgrdgrdgrdagnrgtHTITNTKERIERIEKNILDRYHDDELVE-HKIR 1080
Cdd:pfam05557 385 AEDMTQKMQAHNE---------EMEAQLSVAE---------------EELGGYKQQAQTLERELQALRQQESLADpSYSK 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1081 EVNDRWKRELERLENEKDDLERRIRELEDELSQ---IGRGNDK-------TENDITELKRKHAAEIDKLKSDISALHDkH 1150
Cdd:pfam05557 441 EEVDSLRRKLETLELERQRLREQKNELEMELERrclQGDYDPKktkvlhlSMNPAAEAYQQRKNQLEKLQAEIERLKR-L 519
|
570 580 590
....*....|....*....|....*....|....*....
gi 1767287514 1151 LSDLDDEKEQYGKAVEnlkSVEDDLRDKLNNLEKQLADS 1189
Cdd:pfam05557 520 LKKLEDDLEQVLRLPE---TTSTMNFKEVLDLRKELESA 555
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1662-2148 |
1.69e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1662 LEGTLQSLLNKIEKLEMERN---ELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLqsaktllRS 1738
Cdd:PRK02224 211 LESELAELDEEIERYEEQREqarETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEV-------RD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1739 QEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDS 1818
Cdd:PRK02224 284 LRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1819 DTNKYQLQIASFESERQILTEKIKELDGAL-----RLSDSKVQ--DMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSH 1891
Cdd:PRK02224 364 EAAELESELEEAREAVEDRREEIEELEEEIeelreRFGDAPVDlgNAEDFLEELREERDELREREAELEATLRTARERVE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1892 EYQLLKD--------QLLNTQNELNGANNRKQQ---LENELLNVRSEVRDYKQRvHDVNNRVSELQRQLQDANTEKNRVE 1960
Cdd:PRK02224 444 EAEALLEagkcpecgQPVEGSPHVETIEEDRERveeLEAELEDLEEEVEEVEER-LERAEDLVEAEDRIERLEERREDLE 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1961 DRFLSVEKVVNTMRTTETDLRQQ---LETAKNEKRVATKEL----EDLKRRLAQLENERrnssqlsdGWKKEKITLLKKI 2033
Cdd:PRK02224 523 ELIAERRETIEEKRERAEELRERaaeLEAEAEEKREAAAEAeeeaEEAREEVAELNSKL--------AELKERIESLERI 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2034 ELLENEKRRTDAAIRETALQREAieksLNAMERENKELYKncAQLQQQIAQLEMENGNRILEL-TNKQREEQ-----ERQ 2107
Cdd:PRK02224 595 RTLLAAIADAEDEIERLREKREA----LAELNDERRERLA--EKRERKRELEAEFDEARIEEArEDKERAEEyleqvEEK 668
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1767287514 2108 LIRMRQEKGQIEKVIENRErthrNRIKQLEDqiaiLRDQLD 2148
Cdd:PRK02224 669 LDELREERDDLQAEIGAVE----NELEELEE----LRERRE 701
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1810-2028 |
1.85e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.44 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1810 ETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTID----I 1885
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGerarA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1886 QSKTSHEYQLLkDQLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLS 1965
Cdd:COG3883 95 LYRSGGSVSYL-DVLLGSES-FSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1966 VEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKIT 2028
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1766-2144 |
1.87e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.36 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1766 GKEAQLRHLNEQLKNLRTDLDNAHtdIRSLRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQiasfESERQILTEKI 1841
Cdd:pfam02463 113 GKNVTKKEVAELLESQGISPEAYN--FLVQGGKIEIiammKPERRLEIEEEAAGSRLKRKKKEAL----KKLIEETENLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1842 KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1921
Cdd:pfam02463 187 ELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1922 LnvrsevrDYKQRVHDVNNRVSELQrqlqdaNTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2001
Cdd:pfam02463 267 L-------AQVLKENKEEEKEKKLQ------EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2002 KRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQ 2081
Cdd:pfam02463 334 KEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 2082 IAQLEMENGNRILELTNKQREEQERQLIrmRQEKGQIEKVIENRERTHRNRIKQLEDQIAILR 2144
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEEEEESIEL--KQGKLTEEKEELEKQELKLLKDELELKKSEDLL 474
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1056-1249 |
1.90e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 1.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1056 ERIERIEKN------ILDRYHDDELVEHKIREVN-----DRWKRELERLENEKDDLERRIRELEDELSQIgrgndktEND 1124
Cdd:PRK05771 43 ERLRKLRSLltklseALDKLRSYLPKLNPLREEKkkvsvKSLEELIKDVEEELEKIEKEIKELEEEISEL-------ENE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1125 ITELKrKHAAEIDKLKS---DISALHDKHLSDL--------DDEKEQYGKAVENLKSVEDD----------LRDKLNNLE 1183
Cdd:PRK05771 116 IKELE-QEIERLEPWGNfdlDLSLLLGFKYVSVfvgtvpedKLEELKLESDVENVEYISTDkgyvyvvvvvLKELSDEVE 194
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1184 KQLADSLNRENELEREK------RDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKAL 1249
Cdd:PRK05771 195 EELKKLGFERLELEEEGtpseliREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1656-1983 |
1.98e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1656 GFD----IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTEThttinQKETRYRNIEDNLQDAEEERRALE---SR 1728
Cdd:COG4913 605 GFDnrakLAALEAELAELEEELAEAEERLEALEAELDALQERREAL-----QRLAEYSWDEIDVASAEREIAELEaelER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1729 LQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkeeqwdssRFQ 1808
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL---------RAL 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1809 LETKMRESDSDTNKYQLQiASFESERQILTEKIKELDGALRLSDSK-VQDMKDDTDKLRRDLTKAESVENELRK--TIDI 1885
Cdd:COG4913 751 LEERFAAALGDAVERELR-ENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESLPEYLALLDRleEDGL 829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1886 --------QSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVR----------------SEVRDYKQRVHDVNNR 1941
Cdd:COG4913 830 peyeerfkELLNENSIEFVADLLSKLRRAIREIKERIDPLNDSLKRIPfgpgrylrlearprpdPEVREFRQELRAVTSG 909
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1767287514 1942 VSELQRQLQdanteknrvEDRFLSVEKVVNTMRTTETDLRQQ 1983
Cdd:COG4913 910 ASLFDEELS---------EARFAALKRLIERLRSEEEESDRR 942
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
645-1201 |
2.08e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.90 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 645 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRnIQ 724
Cdd:PRK01156 188 LEEKLKSSNLEL-ENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKN---RYESEIKT-AE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 725 KDLDDLREKYDRVHTDNE---KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 801
Cdd:PRK01156 263 SDLSMELEKNNYYKELEErhmKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYI 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 802 KNGARNnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELhSRSGEIEKLNDlnQRLQKEKQDILNQK 881
Cdd:PRK01156 343 KKKSRY-DDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFI-SEILKIQEIDP--DAIKKELNEINVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 882 LKLDGDVQALKETIRKLENELEKLRNENKELVGK-----------EARARDAANQQLSRANLLNKELEDTKQDLKhstdv 950
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVK----- 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 951 nkQLEQDIRDLKERLANIgKGGRISR--------DSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGE 1022
Cdd:PRK01156 494 --DIDEKIVDLKKRKEYL-ESEEINKsineynkiESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1023 IDIPSSGDVIhgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLER 1102
Cdd:PRK01156 571 LNALAVISLI-----------------DIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNN 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1103 RIRELEDELSQIGRGNDKTENditelKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-------LKSVEDDL 1175
Cdd:PRK01156 634 KYNEIQENKILIEKLRGKIDN-----YKKQIAEIDSIIPDLKEITSR-INDIEDNLKKSRKALDDakanrarLESTIEIL 707
|
570 580
....*....|....*....|....*.
gi 1767287514 1176 RDKLNNLEKQLADslnRENELEREKR 1201
Cdd:PRK01156 708 RTRINELSDRIND---INETLESMKK 730
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
667-935 |
2.15e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.02 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 667 LNRRVENLLRENNRLKSEvnPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrniqkdldDLREKYDRVHTDNEkilg 746
Cdd:COG3206 154 ANALAEAYLEQNLELRRE--EARKALEFLEEQLPELRKELEEAEAALE--------------EFRQKNGLVDLSEE---- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 747 elehaqkaAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLekngaRNNDELDKLRQTISDYESQIN 826
Cdd:COG3206 214 --------AKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 827 LLRRHNDELDTTIKGHQgkithlenelhsrsgeiEKLNDLNQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLR 906
Cdd:COG3206 281 ELSARYTPNHPDVIALR-----------------AQIAALRAQLQQEAQRILAS---LEAELEALQAREASLQAQLAQLE 340
|
250 260 270
....*....|....*....|....*....|...
gi 1767287514 907 NENKELVGKEARA----RDAANQQLSRANLLNK 935
Cdd:COG3206 341 ARLAELPELEAELrrleREVEVARELYESLLQR 373
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1762-2021 |
2.31e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1762 LQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfqletkmresdsdtnKYQLQIASFESERQILTEKI 1841
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEK---------------------ALLKQLAALERRIAALARRI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1842 KELDGALRLSDSKVQDMKDDTDKLRRDLtkaESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENEL 1921
Cdd:COG4942 72 RALEQELAALEAELAELEKEIAELRAEL---EAQKEELAELLRALYRLGRQPPL---ALLLSPEDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1922 LNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2001
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEL 225
|
250 260
....*....|....*....|
gi 1767287514 2002 KRRLAQLENERRNSSQLSDG 2021
Cdd:COG4942 226 EALIARLEAEAAAAAERTPA 245
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1658-2032 |
2.61e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTT-------ETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1730
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnsesensEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1731 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR---TDLDNAHTDIRSLRDKEEQ------ 1801
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTnqdSVKELIIKNLDNTRESLETqlkvls 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1802 ---------WDSSRFQLETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDL 1869
Cdd:TIGR04523 475 rsinkikqnLEQKQKELKSKEKELKKLNEEKKEleeKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1870 TKaesveNELRKTIDIQSKTSHEYQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 1949
Cdd:TIGR04523 555 KK-----ENLEKEIDEKNKEIEELKQTQKSLKKKQEEK---QELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1950 QDANTEKNRVEDRFLSVEKVVNTMRTTetdlrqqLETAKNEKRVATKELEDLKRRLAQLenerrnsSQLSDGWKKEKITL 2029
Cdd:TIGR04523 627 EKLSSIIKNIKSKKNKLKQEVKQIKET-------IKEIRNKWPEIIKKIKESKTKIDDI-------IELMKDWLKELSLH 692
|
...
gi 1767287514 2030 LKK 2032
Cdd:TIGR04523 693 YKK 695
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
561-1466 |
2.70e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.66 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 561 LNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLqasfqksstd 640
Cdd:TIGR00606 181 ATRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPL---------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 641 darKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQirysddi 719
Cdd:TIGR00606 251 ---KNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYHNHQRTVREKERE------- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 720 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQD 799
Cdd:TIGR00606 321 LVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEH-----IRARDSLIQSLATRLELDGFERGPFSERQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 800 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 879
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 880 qklkldgdvqaLKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRANLLNKELEDTKQdLKHSTDVNKQLEQDIR 959
Cdd:TIGR00606 476 -----------LDQELRKAERELSKA-EKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQ-LNHHTTTRTQMEMLTK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 960 DLKERLANIGKGGRISRDSTTGTdggafgdrssvadpsrtrgaAGSTVFVPAAEDIESRGGGEIDIpssgdvihgrdgrd 1039
Cdd:TIGR00606 543 DKMDKDEQIRKIKSRHSDELTSL--------------------LGYFPNKKQLEDWLHSKSKEINQ-------------- 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1040 grdagnrgthtitnTKERIERIEKNIldryhddelveHKIREVNDRWKRELERLENEKDDLERRIREL---EDELSQIGR 1116
Cdd:TIGR00606 589 --------------TRDRLAKLNKEL-----------ASLEQNKNHINNELESKEEQLSSYEDKLFDVcgsQDEESDLER 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1117 GNDKTENDITELKRKHAAeidklksdiSALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1196
Cdd:TIGR00606 644 LKEEIEKSSKQRAMLAGA---------TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKST 714
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1197 ERE----KRDYDEKINSLYGQN---QKIKDEWDDFRN---DADKEIQKWKTDaytVRSEAKALETTNTALKAQ--LQAAN 1264
Cdd:TIGR00606 715 ESElkkkEKRRDEMLGLAPGRQsiiDLKEKEIPELRNklqKVNRDIQRLKND---IEEQETLLGTIMPEEESAkvCLTDV 791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1265 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMD---------LESTQNRLRSLEDQHSTLQSDANKWRG 1335
Cdd:TIGR00606 792 TIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQheldtvvskIELNRKLIQDQQEQIQHLKSKTNELKS 871
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1336 E---LDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQA-DHLNQLASQFD 1411
Cdd:TIGR00606 872 EklqIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAqDKVNDIKEKVK 951
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1412 TK---LTKLRNELQD-TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTT 1466
Cdd:TIGR00606 952 NIhgyMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQ 1010
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
758-1052 |
2.76e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.06 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 758 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDT 837
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERR---EELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 838 TIKGHQ---GKITHLENELHSRS-----GEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNEN 909
Cdd:COG3883 91 RARALYrsgGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 910 KELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGD 989
Cdd:COG3883 171 AELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAG 250
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 990 RSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1052
Cdd:COG3883 251 AAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGV 313
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1658-2148 |
2.94e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.51 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1658 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIED---NLQDAEEERRALESRLQSAKT 1734
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSalnELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1735 LLRSQEEALKQRDE-ERRQMK---SKMVAAELQARG---KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDssrf 1807
Cdd:PRK01156 264 DLSMELEKNNYYKElEERHMKiinDPVYKNRNYINDyfkYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYN---- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1808 QLETKMRESDsDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK-LRRDLTKAESVENEL----RKT 1882
Cdd:PRK01156 340 DYIKKKSRYD-DLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEiLKIQEIDPDAIKKELneinVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1883 IDIQSKTSHEYQLL------KDQLLNTQNELNGANNRK---QQLENEllNVRSEVRDYKQRVHDVNNRVSELQRQLQDAN 1953
Cdd:PRK01156 419 QDISSKVSSLNQRIralrenLDELSRNMEMLNGQSVCPvcgTTLGEE--KSNHIINHYNEKKSRLEEKIREIEIEVKDID 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1954 TEKNRVEDR--FLSVEKVvntmrttetdlrQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL- 2030
Cdd:PRK01156 497 EKIVDLKKRkeYLESEEI------------NKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLd 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2031 -KKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQ--QQIAQLEMENGNRILELTNKQREEQERQ 2107
Cdd:PRK01156 565 sKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKsyIDKSIREIENEANNLNNKYNEIQENKIL 644
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1767287514 2108 LIRMRQE----KGQIEKV--IENRERTHRNRIKQLEDQIAILRDQLD 2148
Cdd:PRK01156 645 IEKLRGKidnyKKQIAEIdsIIPDLKEITSRINDIEDNLKKSRKALD 691
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1748-2128 |
3.67e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.31 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1748 EERRQMKSKMVAAELQA--RGKEAQLRhLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQL 1825
Cdd:COG5022 737 EDMRDAKLDNIATRIQRaiRGRYLRRR-YLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSY 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1826 QIASFESERQILTEKIkeldgaLRLSDSKVQDMKDDTDKLR--RDLTKAESVENELRKTIDIQSKTshEYQLLKDQLLNT 1903
Cdd:COG5022 816 LACIIKLQKTIKREKK------LRETEEVEFSLKAEVLIQKfgRSLKAKKRFSLLKKETIYLQSAQ--RVELAERQLQEL 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1904 QNELNGANNRKQ---QLENELLNVRSEVRdykqrvhdvNNRVSELQRQLQDANTEKNRVEDRFLSVEKvvnTMRTTETDL 1980
Cdd:COG5022 888 KIDVKSISSLKLvnlELESEIIELKKSLS---------SDLIENLEFKTELIARLKKLLNNIDLEEGP---SIEYVKLPE 955
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1981 RQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKrrtdaairetalqreaieKS 2060
Cdd:COG5022 956 LNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQEST------------------KQ 1017
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 2061 LNAMERENKELYKN----CAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERT 2128
Cdd:COG5022 1018 LKELPVEVAELQSAskiiSSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLEST 1089
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1055-1450 |
4.08e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 49.28 E-value: 4.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1055 KERIerieKNILDR--YHDDELVEHKIREVNDRWKRELERLE--------NEKDDLERRIREledELSQIGRGN-DKTEN 1123
Cdd:TIGR01612 606 KEKI----KNISDKneYIKKAIDLKKIIENNNAYIDELAKISpyqvpehlKNKDKIYSTIKS---ELSKIYEDDiDALYN 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1124 DITELKRKHA-------AEIDKLKSDISALHDK-----------HLSDLDDEKEQYGKA-VENLKSVEDDLRDKLNnleK 1184
Cdd:TIGR01612 679 ELSSIVKENAidntedkAKLDDLKSKIDKEYDKiqnmetatvelHLSNIENKKNELLDIiVEIKKHIHGEINKDLN---K 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1185 QLADSLNRENELErekrdydEKINslygqnqkikdewdDFRNDADkEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN 1264
Cdd:TIGR01612 756 ILEDFKNKEKELS-------NKIN--------------DYAKEKD-ELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNY 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1265 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLEStqNRLRSLEDQHSTLQSDANKWRGELdaalrEN 1344
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIFKIINEMKFMKDDFL----NKVDKFINFEN--NCKEKIDSEHEQFAELTNKIKAEI-----SD 882
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1345 DILKSNNTNMETDLTRLKNRLKSAE------DALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQ------------- 1405
Cdd:TIGR01612 883 DKLNDYEKKFNDSKSLINEINKSIEeeyqniNTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKnidtikesnliek 962
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1767287514 1406 -LASQFDTKLTKLRNELQDTNDKLITSDTERNalRNELQKLSQELK 1450
Cdd:TIGR01612 963 sYKDKFDNTLIDKINELDKAFKDASLNDYEAK--NNELIKYFNDLK 1006
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1831-2148 |
4.33e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 4.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1831 ESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKD---QLLNTQNE 1906
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIkDLNDKLKKNKDKINKlnsDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1907 LNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLET 1986
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1987 AKNEKRVATKELEDLKrrlAQLENERRNSSQLSDgWKKEKITLLKKIELLENEKRRTDAAIRETALQreaIEKSLNAMER 2066
Cdd:TIGR04523 192 IKNKLLKLELLLSNLK---KKIQKNKSLESQISE-LKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ---LNQLKDEQNK 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2067 ENKELYKNcaqlqqqiaQLEMENGNRILELTNKQREEQERQLIRMRQEK---------GQIEKV------IENRERTHRN 2131
Cdd:TIGR04523 265 IKKQLSEK---------QKELEQNNKKIKELEKQLNQLKSEISDLNNQKeqdwnkelkSELKNQekkleeIQNQISQNNK 335
|
330
....*....|....*..
gi 1767287514 2132 RIKQLEDQIAILRDQLD 2148
Cdd:TIGR04523 336 IISQLNEQISQLKKELT 352
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
705-863 |
4.44e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 4.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 705 RIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEH--ARH 782
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 783 LFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDTTIKGHQGKITHLENELHSRSGEIEK 862
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELE---AELEEKKAELDEELAELEAELEELEAEREE 167
|
.
gi 1767287514 863 L 863
Cdd:COG1579 168 L 168
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1706-1956 |
4.57e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.47 E-value: 4.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1706 TRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAaelQARGKEAQLRHLNEQLKNLRTDL 1785
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVE---EAKTIKAEIEELTDELLNLVMDI 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1786 DNAHTDIRSLRDKEEQWDS--SRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQdmkddtd 1863
Cdd:PHA02562 251 EDPSAALNKLNTAAAKIKSkiEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAID------- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1864 klrrdltKAESVENELRKtidiQSKTSHEyqlLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 1943
Cdd:PHA02562 324 -------ELEEIMDEFNE----QSKKLLE---LKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELD 389
|
250
....*....|...
gi 1767287514 1944 ELQRQLQDANTEK 1956
Cdd:PHA02562 390 KIVKTKSELVKEK 402
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
540-695 |
5.19e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.84 E-value: 5.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 540 DNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL---------RASE 610
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnvrnnkeyEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 611 AERVAAEKARKFLEDELAKL--QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNP- 687
Cdd:COG1579 96 KEIESLKRRISDLEDEILELmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPe 175
|
....*...
gi 1767287514 688 LKDKYRDL 695
Cdd:COG1579 176 LLALYERI 183
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1716-2139 |
5.35e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 5.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1716 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARgKEAQLRHLNEQLKNLRTDLdNAHTDIRSL 1795
Cdd:TIGR00618 208 LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRAQE-AVLEETQER 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1796 RDKEEQW----------DSSRFQ-------LETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDgALRLSDSKV 1855
Cdd:TIGR00618 286 INRARKAaplaahikavTQIEQQaqrihteLQSKMRSRAKLLMKRAAhvkQQSSIEEQRRLLQTLHSQEI-HIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1856 QDMKDDTDK----------LRRDLTKAESVENELRKTIDIQSKTSH-------EYQLLKDQLLNTQNELNGANNRKQQLE 1918
Cdd:TIGR00618 365 TSIREISCQqhtltqhihtLQQQKTTLTQKLQSLCKELDILQREQAtidtrtsAFRDLQGQLAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1919 NELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQlETAKNEKRVATKEL 1998
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS-CIHPNPARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1999 EDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQL 2078
Cdd:TIGR00618 524 GPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2079 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEK---------VIENRERTHRNRIKQLEDQ 2139
Cdd:TIGR00618 604 SEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLtalhalqltLTQERVREHALSIRVLPKE 673
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
573-737 |
7.40e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 7.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 573 RLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQK--------SSTDDARK 644
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgnvRNNKEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 645 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysdDIRRNIQ 724
Cdd:COG1579 94 LQKEIESLKRRI-SDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE---AEREELA 169
|
170
....*....|....
gi 1767287514 725 KDLD-DLREKYDRV 737
Cdd:COG1579 170 AKIPpELLALYERI 183
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1256-1514 |
8.24e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.97 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1256 LKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELadtkgNLVQKEMD-LESTQNRLRSLEDQHSTLQSDANKWR 1334
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEY-----NNAMDDYNnLKSALNELSSLEDMKNRYESEIKTAE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1335 GELDAALRENdilksnntnmetdltrlkNRLKSAEDALKELKNSLSHAKteKERLQNAFREKtKQADHLNQLASQFDTKL 1414
Cdd:PRK01156 263 SDLSMELEKN------------------NYYKELEERHMKIINDPVYKN--RNYINDYFKYK-NDIENKKQILSNIDAEI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1415 TKLRN------ELQDTNDKLITSDTERNALRNELQKLSQ-ELKFGN-----EQIQRKSDEYQTTIDDLAhshrvSEDSRL 1482
Cdd:PRK01156 322 NKYHAiikklsVLQKDYNDYIKKKSRYDDLNNQILELEGyEMDYNSylksiESLKKKIEEYSKNIERMS-----AFISEI 396
|
250 260 270
....*....|....*....|....*....|....
gi 1767287514 1483 NALQEL--EARKYEINDLTSRLDSTEQRLATLQQ 1514
Cdd:PRK01156 397 LKIQEIdpDAIKKELNEINVKLQDISSKVSSLNQ 430
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
277-944 |
8.31e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 47.89 E-value: 8.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 277 LSLEDENDRLRREFEryANDSK-----DKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQK 351
Cdd:pfam10174 6 RDLQRENELLRRELD--IKESKlgssmNSIKTFWSPELKKERALRKEEAARISVLKEQYRVTQEENQHLQLTIQALQDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 352 aeftRAIRNVNNISrNAAFSAGAGDGLGLYGLEDGGDVN--RTTNNYEKVFIE------TIKRM-------NGTGGAGSA 416
Cdd:pfam10174 84 ----RAQRDLNQLL-QQDFTTSPVDGEDKFSTPELTEENfrRLQSEHERQAKElfllrkTLEEMelrietqKQTLGARDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 417 SSADLLEELrkiRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQG--ALKKLH 494
Cdd:pfam10174 159 SIKKLLEML---QSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKtkALQTVI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 495 EMA-------QDSEKNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENa 567
Cdd:pfam10174 236 EMKdtkisslERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLET- 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 568 dearrrLDKQFADAKREISNLQKSVDEAERNSRRTDDKLrasEAERVAAEKARKFLEDELAKLQASFQKSSTDDA--RKL 645
Cdd:pfam10174 315 ------LTNQNSDCKQHIEVLKESLTAKEQRAAILQTEV---DALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGeiRDL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 646 RDEMDehtnsIQEEfktRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNST--------------QRRIEEKET 711
Cdd:pfam10174 386 KDMLD-----VKER---KINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTdtalttleealsekERIIERLKE 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 712 QIRYSDDIRR----NIQKDLDDLREKYDRVHTD-NEKILGELEHAQKAAHLAEQQLKeikiqRDDYQKQKDEHARHLFDI 786
Cdd:pfam10174 458 QREREDRERLeeleSLKKENKDLKEKVSALQPElTEKESSLIDLKEHASSLASSGLK-----KDSKLKSLEIAVEQKKEE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 787 RHKLETEIKGRQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDL 866
Cdd:pfam10174 533 CSKLENQLKKAHNAEEAVRTNPEINDRIRL----LEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESL 608
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 867 NQRLQKEkQDILNQKLKldgDVQALKEtiRKLENELEKLRNEnkelvgKEARARDAANQQLSRanlLNKELEDTKQDL 944
Cdd:pfam10174 609 TLRQMKE-QNKKVANIK---HGQQEMK--KKGAQLLEEARRR------EDNLADNSQQLQLEE---LMGALEKTRQEL 671
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
537-781 |
8.83e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 537 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseAERVAA 616
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL----GERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 617 EKARKFLEDELAKLQASfqKSSTDDARKLrdemdehtnsiqeefkTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLE 696
Cdd:COG3883 95 LYRSGGSVSYLDVLLGS--ESFSDFLDRL----------------SALSKIADADADLLEELKADKAELEAKKAELEAKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 697 NEYNSTQRRIEEKETQIrysDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQK 776
Cdd:COG3883 157 AELEALKAELEAAKAEL---EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*
gi 1767287514 777 DEHAR 781
Cdd:COG3883 234 AAAAA 238
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
442-633 |
9.54e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 9.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSlspgkt 521
Cdd:COG3883 40 DALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYLDVLLGSES------ 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 522 plpPSEALR--AVRNTFRNKDND-IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERN 598
Cdd:COG3883 114 ---FSDFLDrlSALSKIADADADlLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAE 190
|
170 180 190
....*....|....*....|....*....|....*
gi 1767287514 599 SRRTDDKLRASEAERVAAEKARKFLEDELAKLQAS 633
Cdd:COG3883 191 EAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1722-2148 |
1.07e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1722 RRALESRLQ-SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQA---RGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1797
Cdd:COG4717 44 RAMLLERLEkEADELFKPQGRKPELNLKELKELEEELKEAEEKEeeyAELQEELEELEEELEELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1798 KEEQWDssrfqLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRlsdsKVQDMKDDTDKLRRDLTkaESVEN 1877
Cdd:COG4717 124 LLQLLP-----LYQELEALEAELAELPERLEELEERLEELRELEEELEELEA----ELAELQEELEELLEQLS--LATEE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1878 ELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRvhdvnNRVSELQRQLQDANT--- 1954
Cdd:COG4717 193 ELQDLAE-------ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE-----ERLKEARLLLLIAAAlla 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1955 -----------------------------------EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 1999
Cdd:COG4717 261 llglggsllsliltiagvlflvlgllallflllarEKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2000 DLKRRLAQLENERRNSSQLSDGWKKEKItLLKKIELLENEKRRTDAAIRETALQ---REAIEKSLNAMERENKELYKNCA 2076
Cdd:COG4717 341 ELLDRIEELQELLREAEELEEELQLEEL-EQEIAALLAEAGVEDEEELRAALEQaeeYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 2077 QLQQQIAQLEMEngNRILELtNKQREEQERQLIRMRQEKGQIEKVIENRERthRNRIKQLEDQIAILRDQLD 2148
Cdd:COG4717 420 ELLEALDEEELE--EELEEL-EEELEELEEELEELREELAELEAELEQLEE--DGELAELLQELEELKAELR 486
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1089-1265 |
1.09e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDK---------------- 1149
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDklqAEIAEAEAEIEERREElgeraralyrsggsvs 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1150 ----------------HLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQ 1213
Cdd:COG3883 104 yldvllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1214 NQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAND 1265
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1303-1665 |
1.33e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1303 VQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLsha 1382
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1383 kteKERLQNAFREKTkQADHLNQL--ASQFDTKLTKL--RNELQDTNDKLItsdternalrNELQKLSQELKFGNEQIQR 1458
Cdd:COG3883 89 ---GERARALYRSGG-SVSYLDVLlgSESFSDFLDRLsaLSKIADADADLL----------EELKADKAELEAKKAELEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1459 KSDEYQTTIDDLAhshrvsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1538
Cdd:COG3883 155 KLAELEALKAELE-----------AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1539 RVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYD-PSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPR 1617
Cdd:COG3883 224 AAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAgAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGS 303
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1767287514 1618 SVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGT 1665
Cdd:COG3883 304 GGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGG 351
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1188-1399 |
1.52e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.93 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1188 DSLNRE--NELEREKRDYDEKINSLygqNQKIKDEwDDFRNDADKeiqkwKTDAYTVRSEAKALETTNTA--LKAQLQAA 1263
Cdd:PHA02562 169 DKLNKDkiRELNQQIQTLDMKIDHI---QQQIKTY-NKNIEEQRK-----KNGENIARKQNKYDELVEEAktIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1264 NDRIDHLTKTVNDHTSKVRDLTsqvrhleDELADTKGNL--VQKEM--------------DLESTQNRLRSLEDQHSTLQ 1327
Cdd:PHA02562 240 TDELLNLVMDIEDPSAALNKLN-------TAAAKIKSKIeqFQKVIkmyekggvcptctqQISEGPDRITKIKDKLKELQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1328 ---SDANKWRGELdaALRENDI---------LKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1395
Cdd:PHA02562 313 hslEKLDTAIDEL--EEIMDEFneqskklleLKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDK 390
|
....
gi 1767287514 1396 KTKQ 1399
Cdd:PHA02562 391 IVKT 394
|
|
| PRK10361 |
PRK10361 |
DNA recombination protein RmuC; Provisional |
1287-1447 |
1.62e-04 |
|
DNA recombination protein RmuC; Provisional
Pssm-ID: 182409 [Multi-domain] Cd Length: 475 Bit Score: 46.90 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1287 QVRHLEDELADtkgnlvQKEMDLESTQNRLRSLEDQHstlqsdankWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1366
Cdd:PRK10361 27 HAQQKAEQLAE------REEMVAELSAAKQQITQSEH---------WRAECELLNNEVRSLQSINTSLEADLREVTTRME 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1367 S----AEDALKELKNSLSHAKTEKERLQN-AFREKTKQADH-----LNQLASQFDTKLTKLRNELQDTNDKlitSDTERN 1436
Cdd:PRK10361 92 AaqqhADDKIRQMINSEQRLSEQFENLANrIFEHSNRRVDEqnrqsLNSLLSPLREQLDGFRRQVQDSFGK---EAQERH 168
|
170
....*....|.
gi 1767287514 1437 ALRNELQKLSQ 1447
Cdd:PRK10361 169 TLAHEIRNLQQ 179
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
721-968 |
1.81e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 46.06 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 721 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKaahlaeqQLKEIKIQRDDYQKQKDEharhlfdIRHKLETEIKGRQDL 800
Cdd:COG1340 4 DELSSSLEELEEKIEELREEIEELKEKRDELNE-------ELKELAEKRDELNAQVKE-------LREEAQELREKRDEL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 801 EKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQ--KEKQ 875
Cdd:COG1340 70 NEKVKELKEERDELNEKLNELREELDELRKELAELNKaggSIDKLRKEIERLEWRQQTEVLSPEEEKELVEKIKelEKEL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 876 DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLE 955
Cdd:COG1340 150 EKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKEADELHKEIVEAQEKADELH 229
|
250
....*....|...
gi 1767287514 956 QDIRDLKERLANI 968
Cdd:COG1340 230 EEIIELQKELREL 242
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
527-823 |
2.10e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 46.05 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 527 EALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 606
Cdd:COG4372 66 EELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 607 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVN 686
Cdd:COG4372 146 AEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKD 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 687 PLKDKYRDLENEYNSTQRRIEEKETQIrySDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 766
Cdd:COG4372 226 SLEAKLGLALSALLDALELEEDKEELL--EEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLN 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 767 IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYES 823
Cdd:COG4372 304 LAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1336-1796 |
2.24e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1336 ELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDT--K 1413
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1414 LTKLRNELQDTN---DKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsEDSRLNALQELEA 1490
Cdd:COG4717 134 LEALEAELAELPerlEELEERLEELRELEEELEELEAEL----AELQEELEELL-------------EQLSLATEEELQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1491 RKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ-----SSANRVINFHTFVDGGAGYVDGVPGGTSVIG 1565
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1566 GGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNL 1645
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1646 DGtttvnMNGGFDIANLEGTLQSLLNKIeKLEMErNELRDTLARmkkkttetHTTINQKETRYRNIEDNLQDAEEERRAL 1725
Cdd:COG4717 357 EE-----LEEELQLEELEQEIAALLAEA-GVEDE-EELRAALEQ--------AEEYQELKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1726 ESRLQ--SAKTLLRSQEEALKQRDEERRQMKSKM--VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR 1796
Cdd:COG4717 422 LEALDeeELEEELEELEEELEELEEELEELREELaeLEAELEQLEEDGELAELLQELEELKAELRELAEEWAALK 496
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1242-1525 |
2.26e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.83 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1242 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSqVRHLEDELADTkgnlvqkEMDLESTQNRLRSLED 1321
Cdd:PRK11281 78 QKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLS-LRQLESRLAQT-------LDQLQNAQNDLAEYNS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1322 QHSTLQSDANKWRGELDAALRE----NDILKSNNTNMETDLTRLKNRLkSAEDALKELKNSLSHAKTE-KERLQNAFrek 1396
Cdd:PRK11281 150 QLVSLQTQPERAQAALYANSQRlqqiRNLLKGGKVGGKALRPSQRVLL-QAEQALLNAQNDLQRKSLEgNTQLQDLL--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1397 TKQADHLNQLASQFDTKLTKLRNELqdtNDKLITSdTERNALRNELQKLSQELKfGNEQIQRksdeyqttidDLAHSHRV 1476
Cdd:PRK11281 226 QKQRDYLTARIQRLEHQLQLLQEAI---NSKRLTL-SEKTVQEAQSQDEAARIQ-ANPLVAQ----------ELEINLQL 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1767287514 1477 SEDsRLNALQELearkyeiNDLTSRLDSTEQRLATLQQdyikadSERDI 1525
Cdd:PRK11281 291 SQR-LLKATEKL-------NTLTQQNLRVKNWLDRLTQ------SERNI 325
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
542-965 |
2.34e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.50 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 542 DIQQLERKLKIAES---QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 618
Cdd:TIGR00618 387 QKTTLTQKLQSLCKeldILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 619 ARKFLEDELAKLQASFQKSStdDARKLRDEMDEHTNSIQEEFKTRIDELN-------------RRVENLLRENNRLKSEv 685
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQET--RKKAVVLARLLELQEEPCPLCGSCIHPNparqdidnpgpltRRMQRGEQTYAQLETS- 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 686 npLKDKYRDLENEYNSTQRrIEEKETQIRYSDDI----RRNIQKDLDDLREKYDRVHTDNEKilgELEHAQKAAHLAEQQ 761
Cdd:TIGR00618 544 --EEDVYHQLTSERKQRAS-LKEQMQEIQQSFSIltqcDNRSKEDIPNLQNITVRLQDLTEK---LSEAEDMLACEQHAL 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 762 LKEIKIQRDDYQK-----QKDEHARHLFDIRHKLETEI----------KGRQDLEKNGARNNDELDKL----RQTISDYE 822
Cdd:TIGR00618 618 LRKLQPEQDLQDVrlhlqQCSQELALKLTALHALQLTLtqervrehalSIRVLPKELLASRQLALQKMqsekEQLTYWKE 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 --SQINLLRRhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---------- 890
Cdd:TIGR00618 698 mlAQCQTLLR---ELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFnnneevtaal 774
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 891 -----LKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANL----LNKELEDTKQDLKHSTDVNKQLEQDIRDL 961
Cdd:TIGR00618 775 qtgaeLSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLqcetLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
|
....
gi 1767287514 962 KERL 965
Cdd:TIGR00618 855 EECS 858
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
668-913 |
2.52e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.16 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 668 NRR--VENLL------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEekeTQIRYSDDIRRNIQKDLDDLREKYDRvHT 739
Cdd:PHA02562 151 ARRklVEDLLdisvlsEMDKLNKDKIRELNQQIQTLDMKIDHIQQQIK---TYNKNIEEQRKKNGENIARKQNKYDE-LV 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 740 DNEKILgeleHAQKAahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTIS 819
Cdd:PHA02562 227 EEAKTI----KAEIE--ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGG-----VCPTCTQQIS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 820 DYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN--------QKL--KLDGDVQ 889
Cdd:PHA02562 296 EGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITlvdkakkvKAAieELQAEFV 375
|
250 260
....*....|....*....|....
gi 1767287514 890 ALKETIRKLENELEKLRNENKELV 913
Cdd:PHA02562 376 DNAEELAKLQDELDKIVKTKSELV 399
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1762-2120 |
2.53e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.65 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1762 LQARGKEAQLRHLNE---QLKNLRTDLDNAHtdirSLRDKEEQW-DSSRFQLETKMRE----SDSDTNKYQLQIASFESE 1833
Cdd:pfam15921 68 IAYPGKEHIERVLEEyshQVKDLQRRLNESN----ELHEKQKFYlRQSVIDLQTKLQEmqmeRDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1834 RQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRkTIDIQSKTSHEYQLLKDQLLNTQNelngANNR 1913
Cdd:pfam15921 144 RNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR-SILVDFEEASGKKIYEHDSMSTMH----FRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1914 KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA-----NTEKNRVEdRFLSVEKV--------VNTMRTTETDL 1980
Cdd:pfam15921 219 GSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKielllQQHQDRIE-QLISEHEVeitgltekASSARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1981 RQQL----ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG--WKKEKITLLKKIELLENEKRRtDAAIRETALQR 2054
Cdd:pfam15921 298 QSQLeiiqEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDkiEELEKQLVLANSELTEARTER-DQFSQESGNLD 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 2055 EAIEKSLNAMERENKELyknCAQLQQQIAQLEMENGNRIL------ELTNKQREEQ--ERQLIRMRQE-KGQIEK 2120
Cdd:pfam15921 377 DQLQKLLADLHKREKEL---SLEKEQNKRLWDRDTGNSITidhlrrELDDRNMEVQrlEALLKAMKSEcQGQMER 448
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1654-2061 |
2.75e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1654 NGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTInqkETRYRNIEDNLQDAEEERRALESRLQSAK 1733
Cdd:COG4913 335 NGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEF---AALRAEAAALLEALEEELEALEEALAEAE 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1734 TLLRSQEEALKQRDEERRQMKSKMV---AAELQARgkeaqlRHLNEQLKNLRTDLDNA--HTDIRslrDKEEQW------ 1802
Cdd:COG4913 412 AALRDLRRELRELEAEIASLERRKSnipARLLALR------DALAEALGLDEAELPFVgeLIEVR---PEEERWrgaier 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1803 -----------------DSSRF----QLETKMRESDSDTNKYQLQIASFESERqiLTEKikeldgaLRLSDSKVQDMKDD 1861
Cdd:COG4913 483 vlggfaltllvppehyaAALRWvnrlHLRGRLVYERVRTGLPDPERPRLDPDS--LAGK-------LDFKPHPFRAWLEA 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1862 TDKLRRDLTKAESVEnELRK-----TIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQ--QLENELLNVRSEVRDYKQR 1934
Cdd:COG4913 554 ELGRRFDYVCVDSPE-ELRRhpraiTRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNRAKlaALEAELAELEEELAEAEER 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1935 VHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETD-------------LRQQLETAKNEKRVATKELEDL 2001
Cdd:COG4913 633 LEALEAELDALQERREALQRLAEYSWDE-IDVASAEREIAELEAElerldassddlaaLEEQLEELEAELEELEEELDEL 711
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2002 KRRLAQLENERRNSSQLsdgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSL 2061
Cdd:COG4913 712 KGEIGRLEKELEQAEEE----LDELQDRLEAAEDLARLELRALLEERFAAALGDAVEREL 767
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
1728-2008 |
2.87e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.00 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1728 RLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNlrtDLDNAhtdiRSLRDKEEQwdsSRF 1807
Cdd:pfam09726 399 RLEQDIKKLKAELQASRQTEQELRSQISSLTSLERSLKSELGQLRQENDLLQT---KLHNA----VSAKQKDKQ---TVQ 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1808 QLETKMRESDSDTNKYQLQIASfESERqilteKIKELDGALRLSDSKVQDMKDDTDKLRRdltKAESVENELRKTidiqs 1887
Cdd:pfam09726 469 QLEKRLKAEQEARASAEKQLAE-EKKR-----KKEEEATAARAVALAAASRGECTESLKQ---RKRELESEIKKL----- 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1888 ktSHEYQLLKDQLlntqnelngannrkQQLENELlnvrSEVRDYKQRVHDVNNRVSELQrqlqdANTEKNRVEDRFLSVE 1967
Cdd:pfam09726 535 --THDIKLKEEQI--------------RELEIKV----QELRKYKESEKDTEVLMSALS-----AMQDKNQHLENSLSAE 589
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1767287514 1968 KVVN-TMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQL 2008
Cdd:pfam09726 590 TRIKlDLFSALGDAKRQLEIAQGQIYQKDQEIKDLKQKIAEV 631
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
450-1250 |
2.93e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 450 ESIERNIELESRgDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTPLPPSEA 528
Cdd:PTZ00121 1082 DAKEDNRADEAT-EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEaRKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 529 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKfenADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRA 608
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRK---AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKK 1237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 609 SEAERVAAEKAR------KFLEDELAKLQASFQKSSTDDARKLR-----DEMDEHTNSIQEEFKTRIDELNRRVENllre 677
Cdd:PTZ00121 1238 DAEEAKKAEEERnneeirKFEEARMAHFARRQAAIKAEEARKADelkkaEEKKKADEAKKAEEKKKADEAKKKAEE---- 1313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 678 nnrlKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIlgelEHAQKAAHL 757
Cdd:PTZ00121 1314 ----AKKADEAKKKAEEAKKKADAAKKKAEEAK---KAAEAAKAEAEAAADEAEAAEEKAEAAEKKK----EEAKKKADA 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 758 AEQQLKEIKiqRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgARNNDELDKLRQTISDYESQINLLRRHNDELDT 837
Cdd:PTZ00121 1383 AKKKAEEKK--KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK-AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 838 TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQAlkETIRKLENELEKLRNENKELVGKEA 917
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA--DEAKKAEEAKKADEAKKAEEAKKAD 1537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 918 RARDAanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDiRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADPS 997
Cdd:PTZ00121 1538 EAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAK--KAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 998 RTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihgRDGRDGRDAGNRGTHTITNTKERIERiEKNILDRYHDDELVEH 1077
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK---KKAEELKKAEEENKIKAAEEAKKAEE-DKKKAEEAKKAEEDEK 1688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1078 KIREVNDRWKRELERLENEKDDLERRIRELEdelsQIGRGNDKTENDITELKRKhaAEIDKLKSDisalhdkhlsDLDDE 1157
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAE----ELKKAEEENKIKAEEAKKE--AEEDKKKAE----------EAKKD 1752
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1158 KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENE---LEREKRDYDEKINSLYGQ--NQKIKDEWDDFRNDADKEI 1232
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkrrMEVDKKIKDIFDNFANIIegGKEGNLVINDSKEMEDSAI 1832
|
810
....*....|....*...
gi 1767287514 1233 QKWKTDAYTVRSEAKALE 1250
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFE 1850
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
442-632 |
2.96e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLH-EMAQDSEKNVDGTVSIKRTRSLSPGK 520
Cdd:COG4942 44 AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRaELEAQKEELAELLRALYRLGRQPPLA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 521 TPLPPSEALRAVRNT------FRNKDNDIQQLERKLKIAESQVKEflnkfenADEARRRLDKQFADAKREISNLQKSVDE 594
Cdd:COG4942 124 LLLSPEDFLDAVRRLqylkylAPARREQAEELRADLAELAALRAE-------LEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190
....*....|....*....|....*....|....*...
gi 1767287514 595 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQA 632
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
542-881 |
3.17e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.97 E-value: 3.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 542 DIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVAAEKARK 621
Cdd:pfam10174 381 EIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQT-------DSSNTDTALTTLEEALSEKERIIE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 622 FLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQEEF---KTRIDELNRRVENL----LRENNRLKS---EVNPLKDK 691
Cdd:pfam10174 454 RLKEQREREDRERLEEL-ESLKKENKDLKEKVSALQPELtekESSLIDLKEHASSLassgLKKDSKLKSleiAVEQKKEE 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 692 YRDLENEYNSTQRRIEEKETQIRYSDDIrRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKiqrDD 771
Cdd:pfam10174 533 CSKLENQLKKAHNAEEAVRTNPEINDRI-RLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELE---SL 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 772 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdYESQINLLRRHNDELDTTikghQGKITHLEN 851
Cdd:pfam10174 609 TLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQ-LEELMGALEKTRQELDAT----KARLSSTQQ 683
|
330 340 350
....*....|....*....|....*....|
gi 1767287514 852 ELHSRSGEiekLNDLNQRLQKEKQDILNQK 881
Cdd:pfam10174 684 SLAEKDGH---LTNLRAERRKQLEEILEMK 710
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1292-1656 |
3.27e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1292 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1371
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1372 LKELKNSLSHAktekERLQNA--FREKTKQADHLNQLASQFDTKLtklrNELQDTNDKLITSDTERNALRNELQKLSQEL 1449
Cdd:COG3883 95 LYRSGGSVSYL----DVLLGSesFSDFLDRLSALSKIADADADLL----EELKADKAELEAKKAELEAKLAELEALKAEL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1450 KFGNEQIQRKSDEYQTTIDDLAhshrVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDA 1529
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLS----AEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1530 LRrfQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSD 1609
Cdd:COG3883 243 AA--SAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAG 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1767287514 1610 QSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGG 1656
Cdd:COG3883 321 AVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGV 367
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
620-881 |
3.36e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.78 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 620 RKFLEDELA-KLQASFQKSSTDDARKLRDE---MDEHTNSIQEEFKTRIDELNRrvenlLRENNrlKSEVNPLKDKYRDL 695
Cdd:PHA02562 153 RKLVEDLLDiSVLSEMDKLNKDKIRELNQQiqtLDMKIDHIQQQIKTYNKNIEE-----QRKKN--GENIARKQNKYDEL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 696 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAE---------QQLKEik 766
Cdd:PHA02562 226 VEEAKTIKAEIEELTDELL-------NLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEkggvcptctQQISE-- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 767 iQRDDYQKQKDEharhLFDIRHKLETEIKGRQDLEKNgarnNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKI 846
Cdd:PHA02562 297 -GPDRITKIKDK----LKELQHSLEKLDTAIDELEEI----MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAI 367
|
250 260 270
....*....|....*....|....*....|....*
gi 1767287514 847 THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQK 881
Cdd:PHA02562 368 EELQAEFVDNAEELAKLQDELDKIVKTKSELVKEK 402
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1674-2001 |
3.51e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 45.66 E-value: 3.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1674 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK-------QR 1746
Cdd:pfam07888 69 EQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDIKtltqrvlER 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1747 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQ 1826
Cdd:pfam07888 149 ETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1827 IASFESerqiLTEKIKELDGALRLSDSKVQDMKDDTDKL--RRDLTKAEsvenelrktidiqsktSHEYQLLKDQLLNTQ 1904
Cdd:pfam07888 229 EAENEA----LLEELRSLQERLNASERKVEGLGEELSSMaaQRDRTQAE----------------LHQARLQAAQLTLQL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1905 NELN-----GANNRKQQLENELLNVRSEvrdyKQRVHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETd 1979
Cdd:pfam07888 289 ADASlalreGRARWAQERETLQQSAEAD----KDRIEKLSAELQRLEERLQEERMEREKLEVE-LGREKDCNRVQLSES- 362
|
330 340
....*....|....*....|..
gi 1767287514 1980 lRQQLETAKNEKRVATKELEDL 2001
Cdd:pfam07888 363 -RRELQELKASLRVAQKEKEQL 383
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
814-968 |
3.71e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 45.47 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 814 LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKE 893
Cdd:PRK12705 39 LQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR--EEERLVQKEEQLDARAEKLDNLENQLEEREKALSA 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 894 TIRKLENELEKLRNENKELVGKEaraRDAANQQLsrANLLNKELEDTKQDLKhstdvnKQLEQDIRDLKERLANI 968
Cdd:PRK12705 117 RELELEELEKQLDNELYRVAGLT---PEQARKLL--LKLLDAELEEEKAQRV------KKIEEEADLEAERKAQN 180
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1657-1901 |
3.84e-04 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 45.45 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1657 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEE----ERRALESRLQSA 1732
Cdd:pfam05622 211 FEYKKLEEKLEALQKEKERLIIERDTLRETNEELRCAQLQQAELSQADALLSPSSDPGDNLAAEimpaEIREKLIRLQHE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1733 KTLLR-SQEEALKQRDEERRQMkskMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLET 1811
Cdd:pfam05622 291 NKMLRlGQEGSYRERLTELQQL---LEDANRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQKLEE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1812 ---KMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDskvQDMKDDTDKLRRDLTKAESVenelRKTID--I 1885
Cdd:pfam05622 368 hleKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKD---EDMKAMEERYKKYVEKAKSV----IKTLDpkQ 440
|
250
....*....|....*.
gi 1767287514 1886 QSKTSHEYQLLKDQLL 1901
Cdd:pfam05622 441 NPASPPEIQALKNQLL 456
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
527-963 |
3.85e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.73 E-value: 3.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 527 EALRAVRNTFRNKDNDIQQLERKlKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 606
Cdd:TIGR00618 466 QSLKEREQQLQTKEQIHLQETRK-KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSE 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 607 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEHTNsIQEEFKTRIDELNRRVENLLRENNRLKSEVN 686
Cdd:TIGR00618 545 EDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR-SKEDIPNLQN-ITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 687 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRniqkdlDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 766
Cdd:TIGR00618 623 PEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQ------ERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWK 696
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 767 iqrddyqkqkdEHARHLFDIRHKLETEIKgrqdlekngarnndELDKLRQTISD-YESQINLLRRHNDELDTTIKGHQG- 844
Cdd:TIGR00618 697 -----------EMLAQCQTLLRELETHIE--------------EYDREFNEIENaSSSLGSDLAAREDALNQSLKELMHq 751
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 845 ---KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL---EKLRNENKELVGKEAR 918
Cdd:TIGR00618 752 artVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIpsdEDILNLQCETLVQEEE 831
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1767287514 919 ardaanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 963
Cdd:TIGR00618 832 ------QFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1898-2284 |
4.06e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 4.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1898 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE----KNRVEDRFLSVEKVVNTM 1973
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEiaeaEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1974 RTTETDLR--QQLETAKNekrvatkeLEDLKRRLAQLenerrnsSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETA 2051
Cdd:COG3883 96 YRSGGSVSylDVLLGSES--------FSDFLDRLSAL-------SKIADADADLLEELKADKAELEAKKAELEAKLAELE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2052 LQREAIEKSLNAMERENKELykncaqlqqqiaqlemengNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2131
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQ-------------------EALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2132 RIKQLEDQIAILRDQLDGERRRRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTP 2211
Cdd:COG3883 222 AAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASG 301
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 2212 PLGSSTPTHRPHVTDFRSAVDAGSSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2284
Cdd:COG3883 302 GSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGVGLSVGGG 374
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
761-969 |
4.16e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 45.27 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 761 QLKEIKIQRDDYQKQKDEHARHLFDIRHK-LETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTI 839
Cdd:pfam07888 48 QAQEAANRQREKEKERYKRDREQWERQRReLESRV---AELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQR 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 840 KGHQGKITHLENELHS-------RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKEL 912
Cdd:pfam07888 125 AAHEARIRELEEDIKTltqrvleRETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQR 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 913 VGKEARARDAAN---QQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 969
Cdd:pfam07888 205 DTQVLQLQDTITtltQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMA 264
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1711-2148 |
4.41e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1711 IEDNLQDAE----EERRALEsrlqsAKTLLRSQEEALKQRDEErrqmKSKMVAAelqargkeAQLRHLNEQLKNLRTDLD 1786
Cdd:COG3096 227 VRKAFQDMEaalrENRMTLE-----AIRVTQSDRDLFKHLITE----ATNYVAA--------DYMRHANERRELSERALE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1787 NAhtdiRSLRDKEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQILTEKIKELDGALRLSDsKVQDMKDDTDKLR 1866
Cdd:COG3096 290 LR----RELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQDYQAASDHLNLVQTALRQQE-KIERYQEDLEELT 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1867 RDLTKAESVENELRKTIDIQSKTSH----EYQLLKDQLLNTQNELNGANNR--------------KQQLENELL---NVR 1925
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEaaeeEVDSLKSQLADYQQALDVQQTRaiqyqqavqalekaRALCGLPDLtpeNAE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1926 SEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD--LRQQLETAKNEKRVATK------E 1997
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWqtARELLRRYRSQQALAQRlqqlraQ 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1998 LEDLKRRLAQLENERRNSSQLSDGWKKEkitlLKKIELLENEKRRTDAAIRE-TALQREAIEKsLNAMERENKELyknca 2076
Cdd:COG3096 521 LAELEQRLRQQQNAERLLEEFCQRIGQQ----LDAAEELEELLAELEAQLEElEEQAAEAVEQ-RSELRQQLEQL----- 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2077 qlqqqiaqlemenGNRILELTNKQ---REEQERqLIRMRQEKGQI----EKVIENRERTHRN--RIKQLEDQIAILRDQL 2147
Cdd:COG3096 591 -------------RARIKELAARApawLAAQDA-LERLREQSGEAladsQEVTAAMQQLLERerEATVERDELAARKQAL 656
|
.
gi 1767287514 2148 D 2148
Cdd:COG3096 657 E 657
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1239-1534 |
4.45e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1239 AYTVRSEAKALETTNTALKA-QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD--TKGNLVQKEMDLESTQNR 1315
Cdd:COG3206 141 SYTSPDPELAAAVANALAEAyLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQ 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1316 LRSLEDQHSTLQSDANkwrgELDAALRendilksnntnmetdltRLKNRLKSAEDALKELKNSlshaktekERLQNAfre 1395
Cdd:COG3206 221 LSELESQLAEARAELA----EAEARLA-----------------ALRAQLGSGPDALPELLQS--------PVIQQL--- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1396 ktkqadhLNQLAsQFDTKLTKLRNELQDTNDKLItsdternALRNELQKLSQELKfgnEQIQRKSDEYQTTIDDLAhshr 1475
Cdd:COG3206 269 -------RAQLA-ELEAELAELSARYTPNHPDVI-------ALRAQIAALRAQLQ---QEAQRILASLEAELEALQ---- 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1476 vsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYikaDSERDILSDALRRFQ 1534
Cdd:COG3206 327 -------AREASLQAQLAQLEARLAELPELEAELRRLEREV---EVARELYESLLQRLE 375
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1091-1394 |
4.56e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1091 ERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAaeidklksdisalhdkhLSDLDDEKEQYgkaVENLks 1170
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNG-----------------LVDLSEEAKLL---LQQL-- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1171 veDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqnqkikdewddfrnDADKEIQkwktdaytvrseakale 1250
Cdd:COG3206 222 --SELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL----------------LQSPVIQ----------------- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1251 ttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD-TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSD 1329
Cdd:COG3206 267 ----QLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQeAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1330 ANKwrgeldaalrendilksnNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFR 1394
Cdd:COG3206 343 LAE------------------LPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
737-968 |
4.77e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.30 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 737 VHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKdeharhlfdIRHKLETEIKgRQDLEKNGARNNDELDKLRQ 816
Cdd:PRK05771 31 VHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLN---------PLREEKKKVS-VKSLEELIKDVEEELEKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 817 TISDYESQINllrrhndELDTTIKGHQGKITHLE----------NELHSRS-----GEIEKLNDLNQRLQKEKQDILNQK 881
Cdd:PRK05771 101 EIKELEEEIS-------ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYvsvfvGTVPEDKLEELKLESDVENVEYIS 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 882 LKLDGD---VQALKETIRKLENELEKLRNENKELVGKEaRARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDI 958
Cdd:PRK05771 174 TDKGYVyvvVVVLKELSDEVEEELKKLGFERLELEEEG-TPSELIREIKEELEEIEKERESLLEELK---ELAKKYLEEL 249
|
250
....*....|
gi 1767287514 959 RDLKERLANI 968
Cdd:PRK05771 250 LALYEYLEIE 259
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
442-702 |
4.86e-04 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 44.25 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 442 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEknvdgtvsikrtrslspgkt 521
Cdd:pfam00261 18 KEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKLEEAEKAADESE-------------------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 522 plppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFEnadEARRRLdkqfadakreisnlqksvDEAERNSRR 601
Cdd:pfam00261 78 -----RGRKVLENRALKDEEKMEILEAQLKEAKEIAEEADRKYE---EVARKL------------------VVVEGDLER 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 602 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSStddarKLRDEMDEHTNSIQEEFK---TRIDELNRRVENLLREN 678
Cdd:pfam00261 132 AEERAELAESKIVELEEELKVVGNNLKSLEASEEKAS-----EREDKYEEQIRFLTEKLKeaeTRAEFAERSVQKLEKEV 206
|
250 260
....*....|....*....|....
gi 1767287514 679 NRLKSEVNPLKDKYRDLENEYNST 702
Cdd:pfam00261 207 DRLEDELEAEKEKYKAISEELDQT 230
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
760-963 |
5.28e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 5.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 760 QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLrrhNDEldtti 839
Cdd:PHA02562 181 QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI----------ARKQNKYDELVEEAKTIKAEIEEL---TDE----- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 840 kghqgkITHLENELHSRSGEIEKLNDLNQRLqKEKQDILNQKLKL--DGDV-QALKETIRKLENELEKLRNENKEL---- 912
Cdd:PHA02562 243 ------LLNLVMDIEDPSAALNKLNTAAAKI-KSKIEQFQKVIKMyeKGGVcPTCTQQISEGPDRITKIKDKLKELqhsl 315
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 913 ------VGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 963
Cdd:PHA02562 316 ekldtaIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQA 372
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
439-961 |
5.40e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 5.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 439 ELHKELMTKYEESIER----NIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTR 514
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRsqllTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEE------QLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 515 SLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 594
Cdd:TIGR00618 261 LLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKA-VTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 595 AERNSRRTDDKLRASEAERVAAEKARKFLEdelaklQASFQKSSTDDARKLRD--EMDEHTNSIQEEFKTRIDELNRRVE 672
Cdd:TIGR00618 340 IEEQRRLLQTLHSQEIHIRDAHEVATSIRE------ISCQQHTLTQHIHTLQQqkTTLTQKLQSLCKELDILQREQATID 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 673 NLLRENNRLKSEVNPLKdKYRDLENEYNSTQRRIEEKETQI-----------RYSDDIRRNIQKDLDDLREKYDRVHTDN 741
Cdd:TIGR00618 414 TRTSAFRDLQGQLAHAK-KQQELQQRYAELCAAAITCTAQCeklekihlqesAQSLKEREQQLQTKEQIHLQETRKKAVV 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 742 EKILGELEHAQKA-------AHLAEQQLKEIKIQRDDYQKQKDEHARH---LFDIRHKLETEIKGRQDLEKNGARNNDEL 811
Cdd:TIGR00618 493 LARLLELQEEPCPlcgscihPNPARQDIDNPGPLTRRMQRGEQTYAQLetsEEDVYHQLTSERKQRASLKEQMQEIQQSF 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 812 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDlnqrlQKEKQDILNQKLKLDGDVQAL 891
Cdd:TIGR00618 573 SILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHA---LLRKLQP-----EQDLQDVRLHLQQCSQELALK 644
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 892 KETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNK--ELEDTKQDLKHSTDVNKQLEQDIRDL 961
Cdd:TIGR00618 645 LTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEkeQLTYWKEMLAQCQTLLRELETHIEEY 716
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1718-2040 |
5.89e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 5.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1718 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1797
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1798 KEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGAlrlsdSKVQDMKDDTDKLRRdltKAESV-- 1875
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA-----KKAEELKKKEAEEKK---KAEELkk 1723
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1876 ENELRKTIDIQSKTSHEYQLLKDQLLNTQnelNGANNRKQQLENELLNVRSEVRDYKQRV------HDVNNRVSELQRQL 1949
Cdd:PTZ00121 1724 AEEENKIKAEEAKKEAEEDKKKAEEAKKD---EEEKKKIAHLKKEEEKKAEEIRKEKEAVieeeldEEDEKRRMEVDKKI 1800
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1950 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDgwkKEKITL 2029
Cdd:PTZ00121 1801 KDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFN---KEKDLK 1877
|
330
....*....|.
gi 1767287514 2030 LKKIELLENEK 2040
Cdd:PTZ00121 1878 EDDEEEIEEAD 1888
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1929-2148 |
6.09e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1929 RDYKQRVHDVNNRVSELQRQLQDANTEKNRV-------EDRFLSvEKVVNTMRTT--ETDLRQQLETAKNEKRVATKELE 1999
Cdd:COG3206 107 EDPLGEEASREAAIERLRKNLTVEPVKGSNVieisytsPDPELA-AAVANALAEAylEQNLELRREEARKALEFLEEQLP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2000 DLKRRLAQLENER---RNSSQLSDGwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA 2076
Cdd:COG3206 186 ELRKELEEAEAALeefRQKNGLVDL-SEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2077 QLQQQIAQLEMENgnRILELTNK----------QREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQ 2146
Cdd:COG3206 265 IQQLRAQLAELEA--ELAELSARytpnhpdviaLRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
..
gi 1767287514 2147 LD 2148
Cdd:COG3206 343 LA 344
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1103-1317 |
6.29e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1103 RIRELEDELSQIgrgndktENDITELKRkhaaEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNL 1182
Cdd:COG4942 21 AAAEAEAELEQL-------QQEIAELEK----ELAALKKEEKALLKQ-LAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1183 EKQLADSlnrENELEREKRDYDEKINSLY--GQNQKIK-----DEWDDFR---------NDADKE-IQKWKTDAYTVRSE 1245
Cdd:COG4942 89 EKEIAEL---RAELEAQKEELAELLRALYrlGRQPPLAlllspEDFLDAVrrlqylkylAPARREqAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1246 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADtkgnLVQKEMDLESTQNRLR 1317
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE----LQQEAEELEALIARLE 233
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1659-2064 |
6.44e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.29 E-value: 6.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1659 IANLEGTLQsLLNKIEKLEMERNELRDTlarmkkkttethttinqketryrniednLQDAEEERRALESRLQSAKtllrs 1738
Cdd:PRK11281 62 QQDLEQTLA-LLDKIDRQKEETEQLKQQ----------------------------LAQAPAKLRQAQAELEALK----- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1739 qeealKQRDEERRQMKSKMVAAELQARgkeaqLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRE--- 1815
Cdd:PRK11281 108 -----DDNDEETRETLSTLSLRQLESR-----LAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQirn 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1816 --SDSDTNKYQL---QIASFESERQILTEKI----KELDGALRLSdskvqdmkdDTDKLRRDLTKAEsvenelrktidiQ 1886
Cdd:PRK11281 178 llKGGKVGGKALrpsQRVLLQAEQALLNAQNdlqrKSLEGNTQLQ---------DLLQKQRDYLTAR------------I 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1887 SKTSHEYQLLKDqLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE-LQRQLQDAN--TEKNrvedrf 1963
Cdd:PRK11281 237 QRLEHQLQLLQE-AINSKR-LTLSEKTVQEAQSQDEAARIQANPLVAQELEINLQLSQrLLKATEKLNtlTQQN------ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1964 LSVEKVVNTMRTTETDL--------------------RQQLETAKNEKRVAtKELEDLkrRLAQLE-NERRNssQLSDGw 2022
Cdd:PRK11281 309 LRVKNWLDRLTQSERNIkeqisvlkgslllsrilyqqQQALPSADLIEGLA-DRIADL--RLEQFEiNQQRD--ALFQP- 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2023 kKEKITllkkiELLENEKRRTDAAIRETALQ-----REAIE---KSLNAM 2064
Cdd:PRK11281 383 -DAYID-----KLEAGHKSEVTDEVRDALLQllderRELLDqlnKQLNNQ 426
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1665-2071 |
6.64e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.04 E-value: 6.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1665 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERraleSRLQSAKTLLRSQEEALK 1744
Cdd:TIGR00606 204 EHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNL----SKIMKLDNEIKALKSRKK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1745 QRDEERRQMKSKMVAAelqARGKEAQLRHLNE----QLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1820
Cdd:TIGR00606 280 QMEKDNSELELKMEKV---FQGTDEQLNDLYHnhqrTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1821 NKYQLQIASFESERQILTEKIkELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQL 1900
Cdd:TIGR00606 357 DRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1901 LNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQD-------ANTEKNRVEDRFLSVEKVvnTM 1973
Cdd:TIGR00606 436 KGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElskaeknSLTETLKKEVKSLQNEKA--DL 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1974 RTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD------GWKKEKITLLKKIELLENEKRRTDAAI 2047
Cdd:TIGR00606 514 DRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDeltsllGYFPNKKQLEDWLHSKSKEINQTRDRL 593
|
410 420
....*....|....*....|....
gi 1767287514 2048 RETALQREAIEKSLNAMERENKEL 2071
Cdd:TIGR00606 594 AKLNKELASLEQNKNHINNELESK 617
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1048-1307 |
7.82e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 7.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1048 THTITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1127
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEE-------QRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1128 LKRKHA---AEIDKLKSDISALHDKH-----LSDLDDEKEQYGKavenlksveddLRDKLNNLEKQLADSLNRENELERE 1199
Cdd:PHA02562 260 LNTAAAkikSKIEQFQKVIKMYEKGGvcptcTQQISEGPDRITK-----------IKDKLKELQHSLEKLDTAIDELEEI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1200 KRDYDEKINSLYGQNQKIKDEwddfrndadkeiqkwKTDAYTVRSEAKALEttntalkaqlqaanDRIDHLTKTVNDHTS 1279
Cdd:PHA02562 329 MDEFNEQSKKLLELKNKISTN---------------KQSLITLVDKAKKVK--------------AAIEELQAEFVDNAE 379
|
250 260
....*....|....*....|....*...
gi 1767287514 1280 KVrdltSQVRHLEDELADTKGNLVQKEM 1307
Cdd:PHA02562 380 EL----AKLQDELDKIVKTKSELVKEKY 403
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
433-966 |
8.62e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 8.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 433 SSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAEL------RRNREKLNEA---------QGALKKLHEMA 497
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIkalksrKKQMEKDNSElelkmekvfQGTDEQLNDLY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 498 QD--------SEKNVDGTVSI----KRTRSLSPGKTPLppseALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFE 565
Cdd:TIGR00606 308 HNhqrtvrekERELVDCQRELeklnKERRLLNQEKTEL----LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 566 NAdearrrldkqfADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVA-AEKARKFLEDELAKLQASFQKSS---TDD 641
Cdd:TIGR00606 384 RG-----------PFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERlKQEQADEIRDEKKGLGRTIELKKeilEKK 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 ARKLRDEMDEHTN---------SIQEEFKTRIDELNRRVENLLRENnrLKSEVNPLKDKYRDLENeynsTQRRIEEKETQ 712
Cdd:TIGR00606 453 QEELKFVIKELQQlegssdrilELDQELRKAERELSKAEKNSLTET--LKKEVKSLQNEKADLDR----KLRKLDQEMEQ 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 713 IRYSDDIRRNIQKDLDDLREKYDRVHTDNEK-------ILGELEHAQKAAHLAEQQLKEIKIQRDDYQK-----QKDEHA 780
Cdd:TIGR00606 527 LNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKlnkelASLEQN 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 781 RHLFDIRHKLETE-----------IKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT------------ 837
Cdd:TIGR00606 607 KNHINNELESKEEqlssyedklfdVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDenqsccpvcqrv 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 838 --TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGK 915
Cdd:TIGR00606 687 fqTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEML-------GLAPGRQSIIDLKEKEIPELRNKLQKVNRD 759
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 916 EARARDAANQQLSRANLLNKELEDTKqDLKHSTDVNKQLEQDIRDLKERLA 966
Cdd:TIGR00606 760 IQRLKNDIEEQETLLGTIMPEEESAK-VCLTDVTIMERFQMELKDVERKIA 809
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
642-963 |
8.91e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.50 E-value: 8.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 ARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEN-------EYNSTQRRIEEKETQIR 714
Cdd:pfam07888 53 ANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAsseelseEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 715 -YSDDIRRNIQK------DLDDLREKYDRVH-------TDNEKILGELEHAQKAAHLAEQQLKEIKiqrdDYQKQKDEHA 780
Cdd:pfam07888 133 eLEEDIKTLTQRvleretELERMKERAKKAGaqrkeeeAERKQLQAKLQQTEEELRSLSKEFQELR----NSLAQRDTQV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 781 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRhndELDTTIkghqGKITHLENELHSRSGEI 860
Cdd:pfam07888 209 LQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGE---ELSSMA----AQRDRTQAELHQARLQA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 861 EKLN----DLNQRL-------QKEKQDiLNQKLKLDGD-VQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 928
Cdd:pfam07888 282 AQLTlqlaDASLALregrarwAQERET-LQQSAEADKDrIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLS 360
|
330 340 350
....*....|....*....|....*....|....*
gi 1767287514 929 RAnllNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 963
Cdd:pfam07888 361 ES---RRELQELKASLRVAQKEKEQLQAEKQELLE 392
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1089-1234 |
8.99e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 8.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1089 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDKhlsdLDDEKEQYG--- 1162
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEdleKEIKRLELEIEEVEAR----IKKYEEQLGnvr 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 1163 --KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQK 1234
Cdd:COG1579 87 nnKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
|
| Tht1 |
pfam04163 |
Tht1-like nuclear fusion protein; |
1150-1409 |
9.30e-04 |
|
Tht1-like nuclear fusion protein;
Pssm-ID: 282073 Cd Length: 595 Bit Score: 44.43 E-value: 9.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1150 HLSDLDDEKEQYGKAVENL----KSVEDDLRDKLNNLEKQLA-DSLNRENELEREKRDYDEKINSLYGQNQKI-KDEWDD 1223
Cdd:pfam04163 153 REALLEFEKELIIELFLNItelqDQFGDDLDMKILHLMFQMEqDFENFLDDLAQMFDKFDGEFNNATESNRIIiENDFKD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1224 FRNDADKEIQKWktdaytvrSEAKALETTNTALKAQLQAANDRIdhltktvndhTSKVRDLTSQVRHLEDELADTKGNLV 1303
Cdd:pfam04163 233 FNFKVNDEIMGL--------VELENHEQEGMVLEKEIIEKIKQL----------KNEIDDIHHFFADFADELAGYKNDII 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1304 QKEMDLESTQnrlrsledQHSTLQSDANKWRGELDAALRENdilksnntnmetdltrLKNRLKSAEDALKE-LKNSLSHA 1382
Cdd:pfam04163 295 EKINDLKDDS--------ENAIALSAIGKYTSEFSAFMEKN----------------IKDLIEMSEDSLKEsVQRNIDFV 350
|
250 260
....*....|....*....|....*..
gi 1767287514 1383 KTEKERLQNAFREKTKQADHLNQLASQ 1409
Cdd:pfam04163 351 NSGFQELEDFSIGLKEELGGLKKDLSE 377
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1809-2157 |
9.48e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.51 E-value: 9.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1809 LETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMK----------DDTDKLRRDLTKAES-VEN 1877
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKsalnelssleDMKNRYESEIKTAESdLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1878 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENE---LLNVRSEVRDYkqrvHDVNNRVSELQRQLQDANT 1954
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKkqiLSNIDAEINKY----HAIIKKLSVLQKDYNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1955 EKNRVEDrflsVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIE 2034
Cdd:PRK01156 344 KKSRYDD----LNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQ 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2035 LLENEKRRTDAAIRETALQREAIEKSLNAMERENK---------ELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQE 2105
Cdd:PRK01156 420 DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKI 499
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 2106 RQLIRM--RQEKGQIEKVI--ENRERTHRNRIKQLEDQIAILRDQLDGERRRRREY 2157
Cdd:PRK01156 500 VDLKKRkeYLESEEINKSIneYNKIESARADLEDIKIKINELKDKHDKYEEIKNRY 555
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1717-2067 |
9.57e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.56 E-value: 9.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1717 DAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaAELQARGKEAQL---RHLNEQLKNLRTDLDNAHTDIR 1793
Cdd:COG3096 833 DPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQL--QLLNKLLPQANLladETLADRLEELREELDAAQEAQA 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1794 SLRDKEEQWDssrfQLETKMRESDSDTNKY-QLQIASFE--SERQILTEKIKELD------GALRLSDS-----KVQDMk 1859
Cdd:COG3096 911 FIQQHGKALA----QLEPLVAVLQSDPEQFeQLQADYLQakEQQRRLKQQIFALSevvqrrPHFSYEDAvgllgENSDL- 985
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1860 ddTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKDqllntqneLNGANNRKQQLENELLN--------------- 1923
Cdd:COG3096 986 --NEKLRARLEQAEEARREAREQLrQAQAQYSQYNQVLAS--------LKSSRDAKQQTLQELEQeleelgvqadaeaee 1055
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1924 -VRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKN------------- 1989
Cdd:COG3096 1056 rARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDY-------KQEREQVVQAKAgwcavlrlardnd 1128
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1990 -EKRVATKEL-----EDLKR---------RLAQLENER-RNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQ 2053
Cdd:COG3096 1129 vERRLHRRELaylsaDELRSmsdkalgalRLAVADNEHlRDALRLSEDPRRPERKVQFYIAVYQHLRERIRQDIIRTDDP 1208
|
410
....*....|....
gi 1767287514 2054 REAIEKslnaMERE 2067
Cdd:COG3096 1209 VEAIEQ----MEIE 1218
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
719-1141 |
9.67e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 9.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 719 IRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgRQ 798
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-----KL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 799 DLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgKITHLENELHSRSGEI-EKLNDLNQRLQKEKQDI 877
Cdd:COG4717 122 EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEE----ELEELEAELAELQEELeELLEQLSLATEEELQDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 878 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARDAANQQLSRANLL------------------------ 933
Cdd:COG4717 198 AEELEELQQRLAELEEELEEAQEELEELEEELEQL--ENELEAAALEERLKEARLLlliaaallallglggsllslilti 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 934 --------------------NKELEDTKQDLKHSTDVNKQLEQdiRDLKERLANIGKGGRISRDSTTGtdggAFGDRSSV 993
Cdd:COG4717 276 agvlflvlgllallflllarEKASLGKEAEELQALPALEELEE--EELEELLAALGLPPDLSPEELLE----LLDRIEEL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 994 ADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIH-GRDGRDGRDAGNRgthtITNTKERIERIEKNILD--RYH 1070
Cdd:COG4717 350 QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAaLEQAEEYQELKEE----LEELEEQLEELLGELEEllEAL 425
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1767287514 1071 DDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGrgndkTENDITELKRKHAAEIDKLKS 1141
Cdd:COG4717 426 DEEELEEELEEL----EEELEELEEELEELREELAELEAELEQLE-----EDGELAELLQELEELKAELRE 487
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1670-2032 |
1.02e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1670 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALEsRLQSAKTLLRSQEEALKQRDEE 1749
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE-ELKKAEEENKIKAAEEAKKAEE 1672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1750 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1829
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1830 FESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrRDLTKAESVEnelRKTIDIQSKTSHEYQLLKDQLLNTQNELNG 1909
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE--EDEKRRMEVD---KKIKDIFDNFANIIEGGKEGNLVINDSKEM 1827
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1910 ANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflSVEKVVNTMRTTETDlRQQLETAKN 1989
Cdd:PTZ00121 1828 EDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED---DEEEIEEADEIEKID-KDDIEREIP 1903
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1767287514 1990 EKRVATKELEDLKRRLAQLENERRNSSQLsdgwKKEKITLLKK 2032
Cdd:PTZ00121 1904 NNNMAGKNNDIIDDKLDKDEYIKRDAEET----REEIIKISKK 1942
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
583-1268 |
1.08e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.33 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 583 REISNLQKSVDEAERNSRRTDDKLRASEAErvaAEKARKFLEDELAKLQaSFQKSSTDDARKLRDEMDEHTNSIQEEFKT 662
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENK---LQENRKIIEAQRKAIQ-ELQFENEKVSLKLEEEIQENKDLIKENNAT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 663 R--IDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSD-DIRRNIQKD---LDDLREKYDR 736
Cdd:pfam05483 154 RhlCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARlEMHFKLKEDhekIQHLEEEYKK 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 737 VHTDNEKILG-------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNND 809
Cdd:pfam05483 234 EINDKEKQVSllliqitEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDK--------LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLND----LNQRLQKEKQDi 877
Cdd:pfam05483 314 ALEEdlqiatktICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDqlkiITMELQKKSSE- 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 878 LNQKLKLDGDVQALKETIRKLENELEKLRNENKElVGKEARARDAANQQLS-RANLLNKELEDTKQDLKHSTDVNKQLEQ 956
Cdd:pfam05483 393 LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQ-FEKIAEELKGKEQELIfLLQAREKEIHDLEIQLTAIKTSEEHYLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 957 DIRDLKERLANigkggrisrDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDiesrgggeidipssgdvihgrd 1036
Cdd:pfam05483 472 EVEDLKTELEK---------EKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQE---------------------- 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1037 grdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1116
Cdd:pfam05483 521 -------------DIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEK 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1117 GNDKTENDITELKRK---HAAEIDKLKSDISALHDKHLSD---LDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADS- 1189
Cdd:pfam05483 588 QMKILENKCNNLKKQienKNKNIEELHQENKALKKKGSAEnkqLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKk 667
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1190 LNREN---ELEREKRDYDE--------------KINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETT 1252
Cdd:pfam05483 668 ISEEKlleEVEKAKAIADEavklqkeidkrcqhKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIE 747
|
730
....*....|....*.
gi 1767287514 1253 NTALKAQLQAANDRID 1268
Cdd:pfam05483 748 LSNIKAELLSLKKQLE 763
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1051-1459 |
1.12e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.51 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERIERIEKNIlDRYHDDelveHKIREVNDRWKRELERLENEKDDLERRIRELEDE-------LSQIGRGNDKTEN 1123
Cdd:PRK01156 307 IENKKQILSNIDAEI-NKYHAI----IKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYemdynsyLKSIESLKKKIEE 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1124 DITELKRKHA--AEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR--------- 1192
Cdd:PRK01156 382 YSKNIERMSAfiSEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgtt 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1193 --ENELEREKRDYDEKINSLygqNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHL 1270
Cdd:PRK01156 462 lgEEKSNHIINHYNEKKSRL---EEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKI 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1271 TKTVNDHTsKVRDLTSQVRHLEDELADTK------GNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALR 1342
Cdd:PRK01156 539 NELKDKHD-KYEEIKNRYKSLKLEDLDSKrtswlnALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFpdDKSYI 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1343 ENDILKsnntnMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRN 1419
Cdd:PRK01156 618 DKSIRE-----IENEANNLNNKYNEIQEnkiLIEKLRGKIDNYKKQIAEID----SIIPDLKEITSRINDIEDNLKKSRK 688
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1767287514 1420 ELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRK 1459
Cdd:PRK01156 689 ALDDAKANRARLESTIEILRTRINELSDRINDINETLESM 728
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1055-1184 |
1.18e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1055 KERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSqigrgndKTENDITELKRKHAA 1134
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRL-EEQVERLEAEVEELEAELEEKDERIE-------RLERELSEARSEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1135 EIDKlksdisalhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1184
Cdd:COG2433 460 EIRK---------DREISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
642-941 |
1.20e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 44.07 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 642 ARKLRDEMDEHTNSIQEEfktrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNsTQR-----RIEEKETQIRY- 715
Cdd:pfam06160 84 AKKALDEIEELLDDIEED----IKQILEELDELLESEEKNREEVEELKDKYRELRKTLL-ANRfsygpAIDELEKQLAEi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 716 ------------------SDDIRRNIQKDLDDLREKYDRV------------------------------HTDNEKILGE 747
Cdd:pfam06160 159 eeefsqfeeltesgdyleAREVLEKLEEETDALEELMEDIpplyeelktelpdqleelkegyremeeegyALEHLNVDKE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 748 LEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDeharHLFDIrhkLETEIKGRQDLEKNGARNNDELDKLRQTisdye 822
Cdd:pfam06160 239 IQQLEEQLEENLALLENLELDEaeealEEIEERID----QLYDL---LEKEVDAKKYVEKNLPEIEDYLEHAEEQ----- 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 823 sqinllrrhNDELDTtikghqgKITHL-------ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALK 892
Cdd:pfam06160 307 ---------NKELKE-------ELERVqqsytlnENELERVRGLEKQLEELEKRYDEIVERLEEKEVaysELQEELEEIL 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1767287514 893 ETIRKLENELEKLRNENKELVGKEARARDAANQqlsranlLNKELEDTK 941
Cdd:pfam06160 371 EQLEEIEEEQEEFKESLQSLRKDELEAREKLDE-------FKLELREIK 412
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
862-968 |
1.21e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.42 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 862 KLNDLNQRLQKEKQdilnQKLKLDGDVQALKETIRKLENELEKLRNENKELvgkeARARDAANQqlsRANLLNKELEDTK 941
Cdd:PRK09039 61 QIAELADLLSLERQ----GNQDLQDSVANLRASLSAAEAERSRLQALLAEL----AGAGAAAEG---RAGELAQELDSEK 129
|
90 100 110
....*....|....*....|....*....|.
gi 1767287514 942 Q----DLKHSTDVNKQLEQdirdLKERLANI 968
Cdd:PRK09039 130 QvsarALAQVELLNQQIAA----LRRQLAAL 156
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1994-2146 |
1.38e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1994 ATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKEL-- 2071
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELra 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2072 ----------------YKNCAQLQQQ-----IAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHR 2130
Cdd:COG4942 98 eleaqkeelaellralYRLGRQPPLAlllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170
....*....|....*.
gi 1767287514 2131 NRIKQLEDQIAILRDQ 2146
Cdd:COG4942 178 ALLAELEEERAALEAL 193
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1190-1535 |
1.48e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.96 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1190 LNRENELEREKRDYDEKINSLYGQNQKIKDewddfrnDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR--- 1266
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIELEKKASALKR-------QLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKkky 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1267 IDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRE 1343
Cdd:pfam05557 85 LEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKakaSEAEQLRQNLEKQQSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1344 ndiLKSNNTNMETdltrLKNRLKSAEDALKELKNSlshaKTEKERLQNAFREKTKQADHLNQLASQFDTKLTkLRNELQD 1423
Cdd:pfam05557 165 ---LAEAEQRIKE----LEFEIQSQEQDSEIVKNS----KSELARIPELEKELERLREHNKHLNENIENKLL-LKEEVED 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1424 TNDKLITSDTERNALRN---ELQKLSQELKFGNEQIQRKSDEYQTTID-----------DLAHSHRVS---------EDS 1480
Cdd:pfam05557 233 LKRKLEREEKYREEAATlelEKEKLEQELQSWVKLAQDTGLNLRSPEDlsrrieqlqqrEIVLKEENSsltssarqlEKA 312
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1481 RLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQS 1535
Cdd:pfam05557 313 RRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDK 367
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1875-2144 |
1.51e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1875 VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANT 1954
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1955 EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITllKKIE 2034
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAE--QALD 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2035 LLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQE 2114
Cdd:COG4372 187 ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELA 266
|
250 260 270
....*....|....*....|....*....|
gi 1767287514 2115 KGQIEKVIENRERTHRNRIKQLEDQIAILR 2144
Cdd:COG4372 267 ILVEKDTEEEELEIAALELEALEEAALELK 296
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1713-2127 |
1.55e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 43.88 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1713 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQArgKEAQLRHLNEQLKNLRTDLDNAHTDI 1792
Cdd:TIGR00606 393 KNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIEL--KKEILEKKQEELKFVIKELQQLEGSS 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1793 RSLRDKEEQWDSSRFQLetKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1872
Cdd:TIGR00606 471 DRILELDQELRKAEREL--SKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKD 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1873 ESV-ENELRKTIDIQS----------------KTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 1935
Cdd:TIGR00606 549 EQIrKIKSRHSDELTSllgyfpnkkqledwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKL 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1936 HDV------NNRVSELQRQLQDANTE------KNRVEDRFL--------SVEKVVNTMRTTETDLRQQLETAKNEKRVAT 1995
Cdd:TIGR00606 629 FDVcgsqdeESDLERLKEEIEKSSKQramlagATAVYSQFItqltdenqSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1996 KELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNA------------ 2063
Cdd:TIGR00606 709 DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTimpeeesakvcl 788
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 2064 -----MERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRER 2127
Cdd:TIGR00606 789 tdvtiMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE 857
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1108-2134 |
1.56e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.01 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1108 EDELSQIGRGNDKTENDITELKRKHAaeidKLKSDISALHDKhlsdLDDEKEQYGKAVE---NLKSVEDDLRDKLNNLEK 1184
Cdd:pfam01576 11 EEELQKVKERQQKAESELKELEKKHQ----QLCEEKNALQEQ----LQAETELCAEAEEmraRLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1185 QLADSLNRENELEREKRDYDEKINSLYGQnqkiKDEWDDFRNDAdkEIQKWKTDAYTVRSEAK--ALETTNTALKAQLQA 1262
Cdd:pfam01576 83 RLEEEEERSQQLQNEKKKMQQHIQDLEEQ----LDEEEAARQKL--QLEKVTTEAKIKKLEEDilLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1263 ANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrGELDAALR 1342
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQI----AELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1343 EndiLKSNNTNMETDLTRLKNRLK-------SAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdtKLT 1415
Cdd:pfam01576 233 E---LRAQLAKKEEELQAALARLEeetaqknNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGE-------ELE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1416 KLRNELQDTNDKLITSD---TERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEAR 1491
Cdd:pfam01576 303 ALKTELEDTLDTTAAQQelrSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1492 KYEINDLTSRLDSTEQRLATLQQDYIKADSERDIL----SDALRRFQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGG 1567
Cdd:pfam01576 383 ESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELqarlSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKD 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1568 PSAQRSGAYDPSSGGVIGSGISGGPGGSDfgREIEIGRG-------DSDQSDVAYPRSVPFPPSADFSSGRPGAASAGgr 1640
Cdd:pfam01576 463 VSSLESQLQDTQELLQEETRQKLNLSTRL--RQLEDERNslqeqleEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAG-- 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1641 vinNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQD--- 1717
Cdd:pfam01576 539 ---TLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEeka 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1718 -----AEEERRA-LESRLQSAK--TLLRSQEEALKQRDEERRQMKskMVAAELQA-------------------RGKEAQ 1770
Cdd:pfam01576 616 isaryAEERDRAeAEAREKETRalSLARALEEALEAKEELERTNK--QLRAEMEDlvsskddvgknvhelerskRALEQQ 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1771 LRHLNEQLKNLRTDLDNAHTDI---------------RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQ 1835
Cdd:pfam01576 694 VEEMKTQLEELEDELQATEDAKlrlevnmqalkaqfeRDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKK 773
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1836 ILTEKIKEL----DGALRLSDSKVQDMKD---DTDKLRRDLTKAESVenelRKTIDIQSKTSH-EYQLLKDQLLNTQNEL 1907
Cdd:pfam01576 774 KLELDLKELeaqiDAANKGREEAVKQLKKlqaQMKDLQRELEEARAS----RDEILAQSKESEkKLKNLEAELLQLQEDL 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1908 NGANNRKQQLENELLNVRSEV----------RDYKQRVHDvnnRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTE 1977
Cdd:pfam01576 850 AASERARRQAQQERDELADEIasgasgksalQDEKRRLEA---RIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTEL 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1978 TDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKkiELLENEK----------RRTDAAI 2047
Cdd:pfam01576 927 AAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE--EQLEQESrerqaanklvRRTEKKL 1004
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2048 RETALQREAiekslnamERENKELYKncaqlqqqiaqlemengnrileltnkqrEEQERQLIRMRQEKGQIEKVIENRER 2127
Cdd:pfam01576 1005 KEVLLQVED--------ERRHADQYK----------------------------DQAEKGNSRMKQLKRQLEEAEEEASR 1048
|
....*..
gi 1767287514 2128 THRNRIK 2134
Cdd:pfam01576 1049 ANAARRK 1055
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
782-918 |
1.56e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 43.08 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 782 HLFDIRHKLETEIKG----RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDttiKGHQGKITHLENELHSRS 857
Cdd:smart00787 141 LLEGLKEGLDENLEGlkedYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELE---DCDPTELDRAKEKLKKLL 217
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 858 GEIE----KLNDLNQRLQKEKQDIlnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEAR 918
Cdd:smart00787 218 QEIMikvkKLEELEEELQELESKI--------EDLTNKKSELNTEIAEAEKKLEQCRGFTFKEIE 274
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1737-2058 |
1.56e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1737 RSQEEALKQRDEERRQMKSKMVAAELQARgkeaqlRHLNEQLKNLRTDLDNAHTdIRSLRDK---EEQWDSSRFQLETKM 1813
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKAREVERR------RKLEEAEKARQAEMDRQAA-IYAEQERmamERERELERIRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1814 RESDsdtnkyqlQIASFESERQIltEKIKELDgalRLSDSKVQdmkdDTDKLRRDLTKAESVE-NELRKTIDIQSKTSHE 1892
Cdd:pfam17380 360 RELE--------RIRQEEIAMEI--SRMRELE---RLQMERQQ----KNERVRQELEAARKVKiLEEERQRKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1893 YQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvEDRFLSVEKVVNT 1972
Cdd:pfam17380 423 EQIRAEQEEARQREV---RRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEK---RDRKRAEEQRRKI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1973 MRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ------LENERRNSSQLsdgwkKEKITLLKKIELLENEKRRTDAA 2046
Cdd:pfam17380 497 LEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEeerrreAEEERRKQQEM-----EERRRIQEQMRKATEERSRLEAM 571
|
330
....*....|..
gi 1767287514 2047 IRETALQREAIE 2058
Cdd:pfam17380 572 EREREMMRQIVE 583
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1665-2148 |
1.65e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.80 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1665 TLQSLLNKIEKLEMERNELRDTLARMKKKttethttinqketryrnIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK 1744
Cdd:TIGR00618 404 ILQREQATIDTRTSAFRDLQGQLAHAKKQ-----------------QELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1745 QRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR-------------TDLDNAHTDIRSLRDKEEQWDSSRFQLET 1811
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCplcgscihpnparQDIDNPGPLTRRMQRGEQTYAQLETSEED 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1812 KMRESDSDTNKyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSH 1891
Cdd:TIGR00618 547 VYHQLTSERKQ-----------RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQH 615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1892 EYQLLKDQLLNTQN---ELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnRVEDRFLSVEK 1968
Cdd:TIGR00618 616 ALLRKLQPEQDLQDvrlHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQ-KMQSEKEQLTY 694
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1969 VVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIR 2048
Cdd:TIGR00618 695 WKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAAL 774
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2049 ETALQREAIEKSLNAMERENKELYKNcAQLQQQIAQLEMENGNRILELTN---KQREEQERQLIRMRQEK-GQIEKVIEN 2124
Cdd:TIGR00618 775 QTGAELSHLAAEIQFFNRLREEDTHL-LKTLEAEIGQEIPSDEDILNLQCetlVQEEEQFLSRLEEKSATlGEITHQLLK 853
|
490 500
....*....|....*....|....
gi 1767287514 2125 RERThRNRIKQLEDQIAILRDQLD 2148
Cdd:TIGR00618 854 YEEC-SKQLAQLTQEQAKIIQLSD 876
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
800-963 |
1.94e-03 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 43.30 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 800 LEKNGARNNDELDKLRQTISDYESQINLLrrhnDELDTTIKGHQGKITHlENELHSrsgeiEKLNDLNQRLQKEKQDI-- 877
Cdd:pfam09726 400 LEQDIKKLKAELQASRQTEQELRSQISSL----TSLERSLKSELGQLRQ-ENDLLQ-----TKLHNAVSAKQKDKQTVqq 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 878 LNQKLKLDGDVQALKEtirKLENElEKLRNENKELVGKEARARDAANQQ------LSRANLLNKELEDTKQDLKHSTDVN 951
Cdd:pfam09726 470 LEKRLKAEQEARASAE---KQLAE-EKKRKKEEEATAARAVALAAASRGecteslKQRKRELESEIKKLTHDIKLKEEQI 545
|
170
....*....|....*
gi 1767287514 952 KQLE---QDIRDLKE 963
Cdd:pfam09726 546 RELEikvQELRKYKE 560
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
1048-1497 |
2.06e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 43.67 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1048 THTITNTKERIERIEKNILDRYHDDELveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1127
Cdd:PTZ00440 2163 SEAVTNSEEIIENIKKEIIEINENTEM--NTLENTADKLKELYENLKKKKNIINNIYKKINFIKLQEIENSSEKYNDISK 2240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1128 LKRKhaaEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRD----- 1202
Cdd:PTZ00440 2241 LFNN---VVETQKKKLLDNKNKINNIKDKINDKEKELINVDSSFTLESIKTFNEIYDDIKSNIGDLYKLEDTNNDelkkv 2317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1203 --YDEKINSLYGQNQKIKDEWDDFRNDA---DKEIQKWKTDAYTVRSEAKALETTNTALKAQLQaandrIDHLTKTVNDH 1277
Cdd:PTZ00440 2318 klYIENITHLLNRINTLINDLDNYQDENygkDKNIELNNENNSYIIKTKEKINNLKEEFSKLLK-----NIKRNNTLCNN 2392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1278 TSKVRDLTSQVRHLEDELADTKGNLVQKE--MDLESTQNRLRSL---EDQHSTLQSDANKWRGELDAALRENDILKSNNT 1352
Cdd:PTZ00440 2393 NNIKDFISNIGKSVETIKQRFSSNLPEKEklHQIEENLNEIKNImneTKRISNVDAFTNKILQDIDNEKNKENNNMNAEK 2472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1353 --NMETDLTRLKNRLKSAedaLKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLIT 1430
Cdd:PTZ00440 2473 idDLIENVTSHNEKIKSE---LLIINDALRRVKEKKDEMNKLFNSLTENNNNNNNSAKNIVDNSTYIINELESHVSKLNE 2549
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1431 ----SDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSH-RVSEDSRLNALQELEARKYEIND 1497
Cdd:PTZ00440 2550 llsyIDNEIKELENEKLKLLEKAKIEESRKERERIESETQEDNTDEEQiNRQQQERLQKEEEQKAYSQERLN 2621
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1662-2148 |
2.06e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1662 LEGTLqsLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDA--------EEERRALESRLQSAK 1733
Cdd:TIGR02169 223 YEGYE--LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1734 TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKM 1813
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1814 RESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQ----SKT 1889
Cdd:TIGR02169 381 AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQewklEQL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1890 SHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHD--------------VNNRVSEL-----QRQLQ 1950
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraveevlkasiqgVHGTVAQLgsvgeRYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1951 DANTEKNR-----VED--------RFLSVEKV-------VNTMRTTETDLR----------------------------- 1981
Cdd:TIGR02169 541 IEVAAGNRlnnvvVEDdavakeaiELLKRRKAgratflpLNKMRDERRDLSilsedgvigfavdlvefdpkyepafkyvf 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1982 ------QQLETAKN----------------------------------------EKRVATKELEDLKRRLAQLENERRNS 2015
Cdd:TIGR02169 621 gdtlvvEDIEAARRlmgkyrmvtlegelfeksgamtggsraprggilfsrsepaELQRLRERLEGLKRELSSLQSELRRI 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2016 SQLSDGWK-------KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLE-- 2086
Cdd:TIGR02169 701 ENRLDELSqelsdasRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEea 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2087 ------MENGNRILELTNKQRE-------------EQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQL 2147
Cdd:TIGR02169 781 lndleaRLSHSRIPEIQAELSKleeevsriearlrEIEQKLNRLTLEKEYLEKEIQELQ----EQRIDLKEQIKSIEKEI 856
|
.
gi 1767287514 2148 D 2148
Cdd:TIGR02169 857 E 857
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1874-2013 |
2.08e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1874 SVENELRKTIDIQSKTSHEYQL------LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQR 1947
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLehrlkeLPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 1948 QLQDANTEK--NRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERR 2013
Cdd:COG1579 81 QLGNVRNNKeyEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1051-1182 |
2.14e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1051 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK------------RELERLENEKDDLERRIRELEDELSQIGRGN 1118
Cdd:COG1579 47 LEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvrnnkeyealqKEIESLKRRISDLEDEILELMERIEELEEEL 126
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1767287514 1119 DKTENDITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAV-ENLKSVEDDLRDKLNNL 1182
Cdd:COG1579 127 AELEAELAELEAELEEKKAELDEELAEL-EAELEELEAEREELAAKIpPELLALYERIRKRKNGL 190
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1093-1210 |
2.46e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.99 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1093 LENEKDDLERRIRELE----DELSQIGrGNDKTEN---DITELKRKhaaeIDKLKSDISALHDKhlsdlddEKEQYGKAV 1165
Cdd:PRK05771 14 LKSYKDEVLEALHELGvvhiEDLKEEL-SNERLRKlrsLLTKLSEA----LDKLRSYLPKLNPL-------REEKKKVSV 81
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1767287514 1166 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSL 1210
Cdd:PRK05771 82 KSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERL 126
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
419-784 |
2.50e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 419 ADLLEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLnEAQGALKKLHEMAQ 498
Cdd:COG4717 173 AELQEELEELLEQLSLATEEEL-QDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL-EAAALEERLKEARL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 499 DSekNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNkdnDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQF 578
Cdd:COG4717 251 LL--LIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLAL---LFLLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 579 ADAKREISNLQKSVDEAERNSRRTDDKLRasEAERVAAEKARKFLEDELAKLQASFQKSSTDD----------ARKLRDE 648
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLR--EAEELEEELQLEELEQEIAALLAEAGVEDEEElraaleqaeeYQELKEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 649 MDEHTNSIQEEFKTRIDELNRRV-ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirrnIQKDL 727
Cdd:COG4717 404 LEELEEQLEELLGELEELLEALDeEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE-----LLQEL 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 728 DDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKE-IKIQRDDYQKQKDEHARHLF 784
Cdd:COG4717 479 EELKAE-----------LRELAEEWAALKLALELLEEaREEYREERLPPVLERASEYF 525
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
669-1332 |
2.67e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.29 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 669 RRVENLLRENNRLKSEVNPLKDkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKILGE 747
Cdd:pfam12128 234 AGIMKIRPEFTKLQQEFNTLES----AELRLSHLHFGYKSDETLIASRQEERQETSAELNQlLRTLDDQWKEKRDELNGE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 748 LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE----HARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdyES 823
Cdd:pfam12128 310 LSAADAAVAKDRSELEALEDQHGAFLDADIEtaaaDQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK--EQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 824 QINLLRRHNDELD----TTIKGH---QGKITHLENEL-HSRSGEIEKLNDLNQRLqkeKQDILNQKLKLDgDVQALKETI 895
Cdd:pfam12128 388 NNRDIAGIKDKLAkireARDRQLavaEDDLQALESELrEQLEAGKLEFNEEEYRL---KSRLGELKLRLN-QATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 896 RKLEN----------ELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKH--------STDVNKQLEQD 957
Cdd:pfam12128 464 LQLENfderierareEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDElelqlfpqAGTLLHFLRKE 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 958 IRDLKERLANIgkggrISRDSTTGTDGGAFGDRSSVADPSRTRGaagstvfvpAAEDIEsrgggEIDIPSSGDviHGRDG 1037
Cdd:pfam12128 544 APDWEQSIGKV-----ISPELLHRTDLDPEVWDGSVGGELNLYG---------VKLDLK-----RIDVPEWAA--SEEEL 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1038 RDGRDAGNRgthTITNTKERIERIEKnildryhddELVEhkIREVNDRWKRELER----LENEKDDLERRIRELEDELSQ 1113
Cdd:pfam12128 603 RERLDKAEE---ALQSAREKQAAAEE---------QLVQ--ANGELEKASREETFartaLKNARLDLRRLFDEKQSEKDK 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1114 IGRGNDKTENDITELKRKHAAEIDKLKSDISAL---HDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------------K 1178
Cdd:pfam12128 669 KNKALAERKDSANERLNSLEAQLKQLDKKHQAWleeQKEQKREARTEKQAYWQVVEGALDAQLALLKaaiaarrsgakaE 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1179 LNNLEKQLADSL-------NRENELEREKRDYDEKINSLYGQNQKIKdEWDDFRNDA-DKEIQKWKTDAYTVRSEAKALE 1250
Cdd:pfam12128 749 LKALETWYKRDLaslgvdpDVIAKLKREIRTLERKIERIAVRRQEVL-RYFDWYQETwLQRRPRLATQLSNIERAISELQ 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1251 TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTK--GNLVQKEMDLESTQNRLRSLEDQHSTLQS 1328
Cdd:pfam12128 828 QQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKedANSEQAQGSIGERLAQLEDLKLKRDYLSE 907
|
....
gi 1767287514 1329 DANK 1332
Cdd:pfam12128 908 SVKK 911
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1249-1471 |
2.74e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1249 LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTkgnlvqkEMDLESTQNRLRSLEDQHSTLQS 1328
Cdd:PHA02562 197 IKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNL-------VMDIEDPSAALNKLNTAAAKIKS 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1329 DANKWRGELDAaLRENDILKsnnTNMETdltrlknrLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAs 1408
Cdd:PHA02562 270 KIEQFQKVIKM-YEKGGVCP---TCTQQ--------ISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQS- 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1409 qfdTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLA 1471
Cdd:PHA02562 337 ---KKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKS 396
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1105-1409 |
2.75e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.12 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1105 RELEDELSQIGrgNDKTENDitelkrkhAAEIDKLKSDISALHDKHLSDldDEKEQYGKAVENLKSVEDDLRDKLNNLE- 1183
Cdd:PRK10929 26 KQITQELEQAK--AAKTPAQ--------AEIVEALQSALNWLEERKGSL--ERAKQYQQVIDNFPKLSAELRQQLNNERd 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1184 --KQLADSLNrENELEREKRdydeKINS-LYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEA----KALETTNT 1254
Cdd:PRK10929 94 epRSVPPNMS-TDALEQEIL----QVSSqLLEKSRQAQQEQDRAREISDSlsQLPQQQTEARRQLNEIerrlQTLGTPNT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1255 AL-KAQLQAandridhLTKTVNDHTSKVRDLtsqvrhledELADTKGNLVQK--EMDLESTQNRLRSLEDQHSTLQSDAN 1331
Cdd:PRK10929 169 PLaQAQLTA-------LQAESAALKALVDEL---------ELAQLSANNRQElaRLRSELAKKRSQQLDAYLQALRNQLN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1332 KWRG-ELDAALRENDILKSNNTNMETDLTRL--KNRlksaedalkELKNSLSHaktekerlqnafrektkQADHLNQLAS 1408
Cdd:PRK10929 233 SQRQrEAERALESTELLAEQSGDLPKSIVAQfkINR---------ELSQALNQ-----------------QAQRMDLIAS 286
|
.
gi 1767287514 1409 Q 1409
Cdd:PRK10929 287 Q 287
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1674-2011 |
2.84e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1674 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQM 1753
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1754 KSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1833
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1834 RQILTE-----KIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1908
Cdd:COG4372 166 LAALEQelqalSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1909 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAK 1988
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELA 325
|
330 340
....*....|....*....|...
gi 1767287514 1989 NEKRVATKELEDLKRRLAQLENE 2011
Cdd:COG4372 326 KKLELALAILLAELADLLQLLLV 348
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
810-971 |
2.99e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKlkldgDVQ 889
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNK-----EYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 890 ALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDIRDLKERLANIG 969
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELA 169
|
..
gi 1767287514 970 KG 971
Cdd:COG1579 170 AK 171
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1155-1392 |
3.09e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1155 DDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQk 1234
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1235 wktDAYTVRSEAKALETTntaLKAQ-LQAANDRIDhLTKTVNDHTskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQ 1313
Cdd:COG3883 94 ---ALYRSGGSVSYLDVL---LGSEsFSDFLDRLS-ALSKIADAD---ADLLEELKADKAELEAKKAELEAKLAELEALK 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1314 NRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNA 1392
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1087-2067 |
3.19e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1087 KRELERLENekdDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEID---KL---KSDISALHDKHLSDLDDEKEQ 1160
Cdd:pfam01576 70 KQELEEILH---ELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqKLqleKVTTEAKIKKLEEDILLLEDQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1161 YGKAVENLKSVEddlrDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYG---QNQKIKDEWDDFRNDADKEIQKWKT 1237
Cdd:pfam01576 147 NSKLSKERKLLE----ERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEErlkKEEKGRQELEKAKRKLEGESTDLQE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1238 DAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDeladtkgnlvqkemDLESTQNRLR 1317
Cdd:pfam01576 223 QIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQE--------------DLESERAARN 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1318 SLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRL----KSAEDALKELKNSLSHAKTE-KERLQNA 1392
Cdd:pfam01576 289 KAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALeeetRSHEAQLQEMRQKHTQALEElTEQLEQA 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1393 FR-----EKTKQA------------DHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQ 1455
Cdd:pfam01576 369 KRnkanlEKAKQAlesenaelqaelRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1456 IQRKSDEYQTTIDDLAhshrvSEDSRLNALQEL--EARKYEINdLTSRLDSTEQRLATLQQdyiKADSERDILSDALRRF 1533
Cdd:pfam01576 449 LNEAEGKNIKLSKDVS-----SLESQLQDTQELlqEETRQKLN-LSTRLRQLEDERNSLQE---QLEEEEEAKRNVERQL 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1534 QSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSA------QRSGAYDPSSGGVIGSGISGGPGGSDFGRE------I 1601
Cdd:pfam01576 520 STLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEAltqqleEKAAAYDKLEKTKNRLQQELDDLLVDLDHQrqlvsnL 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1602 EIGRGDSDQSdVAYPRSVpfppSADFSSGRPGA-ASAGGRVINNLdgtttvnmnggfdiaNLEGTLQSLLNKIEKLEMER 1680
Cdd:pfam01576 600 EKKQKKFDQM-LAEEKAI----SARYAEERDRAeAEAREKETRAL---------------SLARALEEALEAKEELERTN 659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1681 NELRdtlARMkkkttetHTTINQKEtryrNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAA 1760
Cdd:pfam01576 660 KQLR---AEM-------EDLVSSKD----DVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQAL 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1761 ------ELQARGK--EAQLRHLNEQLKNLRTDLDNAhtdirslRDKEEQWDSSRFQLETKMRESDSDTN----------- 1821
Cdd:pfam01576 726 kaqferDLQARDEqgEEKRRQLVKQVRELEAELEDE-------RKQRAQAVAAKKKLELDLKELEAQIDaankgreeavk 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1822 ---KYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE-----------SVENELRKTIDIQS 1887
Cdd:pfam01576 799 qlkKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASErarrqaqqerdELADEIASGASGKS 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1888 KTSHEYQLLKDQLLNTQNELNGANN---------RKQQLENELLNVR-SEVRDYKQRvhdVNNRVSELQRQLQDANTEKN 1957
Cdd:pfam01576 879 ALQDEKRRLEARIAQLEEELEEEQSntellndrlRKSTLQVEQLTTElAAERSTSQK---SESARQQLERQNKELKAKLQ 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1958 RVEDRFLSVEKvvNTMRTTETDLRQ---QLETAKNEKRVATKEL----EDLKRRLAQLENERRNSSQLSDGWKKEKI--- 2027
Cdd:pfam01576 956 EMEGTVKSKFK--SSIAALEAKIAQleeQLEQESRERQAANKLVrrteKKLKEVLLQVEDERRHADQYKDQAEKGNSrmk 1033
|
1050 1060 1070 1080
....*....|....*....|....*....|....*....|..
gi 1767287514 2028 TLLKKIELLENEKRRTDAAIREtaLQREAIE--KSLNAMERE 2067
Cdd:pfam01576 1034 QLKRQLEEAEEEASRANAARRK--LQRELDDatESNESMNRE 1073
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1093-1235 |
3.23e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 41.93 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1093 LENEKDDLERRIRELEDELSQIgrgndktenditelkRKHAAEIDKLKSDISALHDKHLSDLDDEKEQyGKAVENLKSVE 1172
Cdd:smart00787 142 LEGLKEGLDENLEGLKEDYKLL---------------MKELELLNSIKPKLRDRKDALEEELRQLKQL-EDELEDCDPTE 205
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 1173 DD-LRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDAdKEIQKW 1235
Cdd:smart00787 206 LDrAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKL-EQCRGF 268
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
417-1423 |
3.43e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.12 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 417 SSADLLEELRKIRGGGSSEGDA-ELHKELMTKYEESIERNIELesrgDDSQRKIAELEAELRRNREK--LNEAQGALKKL 493
Cdd:TIGR01612 1299 NISDIREKSLKIIEDFSEESDInDIKKELQKNLLDAQKHNSDI----NLYLNEIANIYNILKLNKIKkiIDEVKEYTKEI 1374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 494 HEmaqdSEKNVDGTVSiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDND-----IQQLERKLKIAESQVKEFlnkFENAD 568
Cdd:TIGR01612 1375 EE----NNKNIKDELD-KSEKLIKKIKDDINLEECKSKIESTLDDKDIDecikkIKELKNHILSEESNIDTY---FKNAD 1446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 569 EARRRLDKQFADAKREiSNLQKSVDEAERNSRRTDDKLRASEAERvAAEKARKFledelaKLQASFQKSSTDDARKL--- 645
Cdd:TIGR01612 1447 ENNENVLLLFKNIEMA-DNKSQHILKIKKDNATNDHDFNINELKE-HIDKSKGC------KDEADKNAKAIEKNKELfeq 1518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 646 -RDEMDEHTNSIQE-EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNI 723
Cdd:TIGR01612 1519 yKKDVTELLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDI 1598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 724 QKDLDDLREKYDRVHTDNEKILGELEHAQKaahlAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQDLEKN 803
Cdd:TIGR01612 1599 QLSLENFENKFLKISDIKKKINDCLKETES----IEKKISSFSIDSQDTELKENG------DNLNSLQEFLESLKDQKKN 1668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 804 GARNNDELDKLRQTISDYESQINLLRRhNDELDTTIKGHQGKITHlENELHSRSGEIE----------KLNDL-----NQ 868
Cdd:TIGR01612 1669 IEDKKKELDELDSEIEKIEIDVDQHKK-NYEIGIIEKIKEIAIAN-KEEIESIKELIEptienlissfNTNDLegidpNE 1746
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 869 RLQK---EKQDILNQKLKLDGDVQALKETIRKLENELEKLRN-----ENKELVGKEARARDAANQQLSRANLLNKELEDT 940
Cdd:TIGR01612 1747 KLEEyntEIGDIYEEFIELYNIIAGCLETVSKEPITYDEIKNtrinaQNEFLKIIEIEKKSKSYLDDIEAKEFDRIINHF 1826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 941 KQDLKHstdVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgDRSSVADP-SRTRGAAGSTV---FVPAAEDIE 1016
Cdd:TIGR01612 1827 KKKLDH---VNDKFTKEYSKINEGFDDISKSIENVKNST---------DENLLFDIlNKTKDAYAGIIgkkYYSYKDEAE 1894
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1017 SRGGGEIDIPSSGDV-IHGRDGRD-----------GRDAGNRGTHTITNTKERIERIEKNILDRYhdDELVEhKIREVND 1084
Cdd:TIGR01612 1895 KIFINISKLANSINIqIQNNSGIDlfdniniailsSLDSEKEDTLKFIPSPEKEPEIYTKIRDSY--DTLLD-IFKKSQD 1971
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1085 RWKRELERLE--NEKDDLERRIR---ELEDELSQIGRGNDKTENDITELKRKhAAEIDKLKSDiSALHDK--HLSDLDDE 1157
Cdd:TIGR01612 1972 LHKKEQDTLNiiFENQQLYEKIQasnELKDTLSDLKYKKEKILNDVKLLLHK-FDELNKLSCD-SQNYDTilELSKQDKI 2049
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1158 KEQ---YGKAVENLKSVED--DLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND----A 1228
Cdd:TIGR01612 2050 KEKidnYEKEKEKFGIDFDvkAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKELTEAFNTEikiiE 2129
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1229 DKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN------------------DRIDHLTKTVNDHTSKVR---DLTSQ 1287
Cdd:TIGR01612 2130 DKIIEKNDLIDKLIEMRKECLLFSYATLVETLKSKVinhsefitsaakfskdffEFIEDISDSLNDDIDALQikyNLNQT 2209
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1288 VRHLEDELADT---KGNLVQKEMDLESTQNRLRSLedqhstLQSDANKwrgeLDAalrenDILKSNNTNMetdlTRLKNR 1364
Cdd:TIGR01612 2210 KKHMISILADAtkdHNNLIEKEKEATKIINNLTEL------FTIDFNN----ADA-----DILHNNKIQI----IYFNSE 2270
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1365 LKSAEDALKELKNSLSHAKTEKERLQNA-FREKTKQADHLNQLASQfdtKLTKLRNELQD 1423
Cdd:TIGR01612 2271 LHKSIESIKKLYKKINAFKLLNISHINEkYFDISKEFDNIIQLQKH---KLTENLNDLKE 2327
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1164-1495 |
3.50e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.82 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1164 AVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvr 1243
Cdd:COG1340 2 KTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKE------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1244 seakalettntaLKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhleDELADTKGNLVQKEMDLESTQNRLRSLEDQH 1323
Cdd:COG1340 76 ------------LKEERDELNEKLNELREEL------------------DELRKELAELNKAGGSIDKLRKEIERLEWRQ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1324 STLQSDANKwrgeldaalrENDILKsnntnmetDLTRLKNRLKSAEDALkELKNSLSHAKTEKERLQNAFREKTKQADHL 1403
Cdd:COG1340 126 QTEVLSPEE----------EKELVE--------KIKELEKELEKAKKAL-EKNEKLKELRAELKELRKEAEEIHKKIKEL 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1404 NQLASQFDTKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDL-AHSHRVSEDSRL 1482
Cdd:COG1340 187 AEEAQELHEEMIELYKEADELRK-------EADELHKEIVEAQEKADELHEEIIELQKELRELRKELkKLRKKQRALKRE 259
|
330
....*....|...
gi 1767287514 1483 NALQELEARKYEI 1495
Cdd:COG1340 260 KEKEELEEKAEEI 272
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1228-1574 |
3.55e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1228 ADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEM 1307
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQA-------ELEALQAEIDKLQAEIAEAEAEIEERRE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1308 DLEstqNRLRSLEDQHSTLqsdankwrGELDAALrendilksNNTNMETDLTRLkNRLKSAEDALKELKNSLSHAKTEKE 1387
Cdd:COG3883 87 ELG---ERARALYRSGGSV--------SYLDVLL--------GSESFSDFLDRL-SALSKIADADADLLEELKADKAELE 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1388 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLitsDTERNALRNELQKLSQELkfgnEQIQRKSDEYQTTI 1467
Cdd:COG3883 147 AKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQL---SAEEAAAEAQLAELEAEL----AAAEAAAAAAAAAA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1468 DDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFV 1547
Cdd:COG3883 220 AAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAA 299
|
330 340
....*....|....*....|....*..
gi 1767287514 1548 DGGAGYVDGVPGGTSVIGGGPSAQRSG 1574
Cdd:COG3883 300 SGGSGGGSGGAGGVGSGGGAGAVVGGA 326
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
536-633 |
3.60e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 536 FRNKDNDIQQLERKLKIAESQVKeflNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseaERVA 615
Cdd:PRK12704 77 LRERRNELQKLEKRLLQKEENLD---RKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL-----ERIS 148
|
90 100
....*....|....*....|....
gi 1767287514 616 ---AEKARKFLEDEL---AKLQAS 633
Cdd:PRK12704 149 gltAEEAKEILLEKVeeeARHEAA 172
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1141-1318 |
3.75e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1141 SDISALHDkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKInslygqnqkikde 1220
Cdd:COG1579 4 EDLRALLD--LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI------------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1221 wddfrNDADKEIQKWKTDAYTVRS--EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADT 1298
Cdd:COG1579 69 -----EEVEARIKKYEEQLGNVRNnkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK 143
|
170 180
....*....|....*....|
gi 1767287514 1299 KGNLVQKEMDLESTQNRLRS 1318
Cdd:COG1579 144 KAELDEELAELEAELEELEA 163
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1758-2021 |
3.87e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1758 VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLrdkEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQIL 1837
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEEL---NEEYNELQAELEALQAEID----KLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1838 TEKIKEldgalRLSDSKVQDmkDDTDKLRRdLTKAESVENELRKTIDIQSKTSHEYQLLkDQLLNTQNELngaNNRKQQL 1917
Cdd:COG3883 85 REELGE-----RARALYRSG--GSVSYLDV-LLGSESFSDFLDRLSALSKIADADADLL-EELKADKAEL---EAKKAEL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1918 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKE 1997
Cdd:COG3883 153 EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAA 232
|
250 260
....*....|....*....|....
gi 1767287514 1998 LEDLKRRLAQLENERRNSSQLSDG 2021
Cdd:COG3883 233 AAAAAAAAAAAASAAGAGAAGAAG 256
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
797-967 |
4.11e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 797 RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND--ELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEK 874
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 875 QDILNQ--KLKLDGDVQALKETIRKLENELEKLR-----------------NENKELVGKEA-RARDAANQQLSRANLLN 934
Cdd:COG3206 250 GSGPDAlpELLQSPVIQQLRAQLAELEAELAELSarytpnhpdvialraqiAALRAQLQQEAqRILASLEAELEALQARE 329
|
170 180 190
....*....|....*....|....*....|...
gi 1767287514 935 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLAN 967
Cdd:COG3206 330 ASLQAQLAQLEARLAELPELEAELRRLEREVEV 362
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1852-2149 |
4.26e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1852 DSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDY 1931
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEEL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1932 KQRVHDVNNRV-------------SELQRQLQDANTEKNRVEDRFLSVEKVVNTMRttetDLRQQLETAKNEKRVATKEL 1998
Cdd:PRK03918 272 KKEIEELEEKVkelkelkekaeeyIKLSEFYEEYLDELREIEKRLSRLEEEINGIE----ERIKELEEKEERLEELKKKL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1999 EDLKRRLAQLE-------------NERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIREtalqreaIEKSLNAME 2065
Cdd:PRK03918 348 KELEKRLEELEerhelyeeakakkEELERLKKRLTGLTPEKLE--KELEELEKAKEEIEEEISK-------ITARIGELK 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2066 RENKELYKN-------------CAQLQQQIAQLE-MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2131
Cdd:PRK03918 419 KEIKELKKAieelkkakgkcpvCGRELTEEHRKElLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL 498
|
330
....*....|....*...
gi 1767287514 2132 RikQLEDQIAILRDQLDG 2149
Cdd:PRK03918 499 K--ELAEQLKELEEKLKK 514
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
452-841 |
4.48e-03 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 42.36 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 452 IERNIELESR-------GDDS---QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRslspgKT 521
Cdd:pfam13166 71 VEENLSEQGEikpiftlGEESieiQEKIAKLKKEIKDHEEKLDAAEANLQKLDKEKEKLEADFLDECWKKIKR-----KK 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 522 PLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEflnkfenaDEARRRLDKQFADAKREISNLQKSV---DEAERN 598
Cdd:pfam13166 146 NSALSEALNGFKYEANFKSRLLREIEKDNFNAGVLLSD--------EDRKAALATVFSDNKPEIAPLTFNVidfDALEKA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 599 SRRTDDKLRASEA-ERVAAE-KARKFLEDELAKLQAS-----FQKSSTDDARKLR------DEMDEHTNSIQEefktRID 665
Cdd:pfam13166 218 EILIQKVIGKSSAiEELIKNpDLADWVEQGLELHKAHldtcpFCGQPLPAERKAAleahfdDEFTEFQNRLQK----LIE 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 666 ELNRRVENLL----------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqirySDDIRRNIQkdLDDLREKYD 735
Cdd:pfam13166 294 KVESAISSLLaqlpavsdlaSLLSAFELDVEDIESEAEVLNSQLDGLRRALEAK------RKDPFKSIE--LDSVDAKIE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 736 RVhTDNEKILGEL--EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKgrqDLEKNGARNNDELDK 813
Cdd:pfam13166 366 SI-NDLVASINELiaKHNEITDNFEEEKNKAKKKLRLHLVEEFKSEIDEYKDKYAGLEKAIN---SLEKEIKNLEAEIKK 441
|
410 420
....*....|....*....|....*...
gi 1767287514 814 LRQTISDYESQINLLRRHNDELDTTIKG 841
Cdd:pfam13166 442 LREEIKELEAQLRDHKPGADEINKLLKA 469
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
579-778 |
4.56e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 579 ADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEhtnsIQE 658
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQA--------EIDKLQAEIAE----AEA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 659 EFKTRIDELNRRVENLLRENNR-------LKSE-----------VNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIR 720
Cdd:COG3883 80 EIEERREELGERARALYRSGGSvsyldvlLGSEsfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 721 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE 778
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1088-1495 |
4.57e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.15 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1088 RELERLENEKDDLERriRELEDELSQIGRGN---------DKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlddek 1158
Cdd:pfam06160 10 KEIDELEERKNELMN--LPVQEELSKVKKLNltgetqekfEEWRKKWDDIVTKSLPDIEELLFEAEELNDKY-------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1159 eQYGKAvenlKSVEDDLRDKLNNLEKQLADSLNRENELeREKrdydEKINSLygQNQKIKDEWDDFRN----------DA 1228
Cdd:pfam06160 80 -RFKKA----KKALDEIEELLDDIEEDIKQILEELDEL-LES----EEKNRE--EVEELKDKYRELRKtllanrfsygPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1229 DKEIQKWKTDAYTVRSEAKALETTNTALKA--QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKE 1306
Cdd:pfam06160 148 IDELEKQLAEIEEEFSQFEELTESGDYLEAreVLEKLEEETDALEELMEDIPPLYEELKTELPDQLEELKEGYREMEEEG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1307 MDLESTQ--NRLRSLEDQHSTLQSDANKwrGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1384
Cdd:pfam06160 228 YALEHLNvdKEIQQLEEQLEENLALLEN--LELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1385 EKERLQNAFrEKTKQADHLN----QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKS 1460
Cdd:pfam06160 306 QNKELKEEL-ERVQQSYTLNenelERVRGLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQL----EEIEEEQ 380
|
410 420 430
....*....|....*....|....*....|....*
gi 1767287514 1461 DEYQTTIDDLahshRVSEDSRLNALQELEARKYEI 1495
Cdd:pfam06160 381 EEFKESLQSL----RKDELEAREKLDEFKLELREI 411
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1663-1878 |
4.77e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1663 EGTLQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1742
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAE-------LEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1743 LKQ--RDEERRQMKSKMVAAELQARG----------KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLE 1810
Cdd:COG3883 88 LGEraRALYRSGGSVSYLDVLLGSESfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELE 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1767287514 1811 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1878
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1679-2007 |
4.81e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.25 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1679 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRD----------- 1747
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEkieryqedlee 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1748 -EERRQMKSKMVA-AELQARGKEAQLRHLNEQLKNLRTDL--------------------------------------DN 1787
Cdd:COG3096 359 lTERLEEQEEVVEeAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyqqavqalekaralcglpdltpEN 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1788 AHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNK----YQL--QIASfESERQILTEKIKELdgaLRLSDSKvQDMKDD 1861
Cdd:COG3096 439 AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQfekaYELvcKIAG-EVERSQAWQTAREL---LRRYRSQ-QALAQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1862 TDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 1941
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1942 VSELQ------RQLQDA-NTEKNRVEDRFLSVEKVVNTMRTTETDLRqQLETAKNEKRVATKELEDLKRRLAQ 2007
Cdd:COG3096 594 IKELAarapawLAAQDAlERLREQSGEALADSQEVTAAMQQLLERER-EATVERDELAARKQALESQIERLSQ 665
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
603-901 |
4.93e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 4.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 603 DDKLRASEAERV--AAEKARKfLEDELAKLQASFQKSSTDDARKlrdemdehtnsiQEEFKTRIDELNRRVENLLrenNR 680
Cdd:PRK05771 34 EDLKEELSNERLrkLRSLLTK-LSEALDKLRSYLPKLNPLREEK------------KKVSVKSLEELIKDVEEEL---EK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 681 LKSEVNPLKDKYRDLENEynstQRRIEEKETQIRYsddiRRNIQKDLDDLREkYDRVHTdnekILGELEHAQKAAHLAEQ 760
Cdd:PRK05771 98 IEKEIKELEEEISELENE----IKELEQEIERLEP----WGNFDLDLSLLLG-FKYVSV----FVGTVPEDKLEELKLES 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 761 QLKEIKIQRDDYQKqkdehaRHLFDIRHKlETEIKGRQDLEKNGARNND--ELDKLRQTISDYESQINLLRRHNDELDTT 838
Cdd:PRK05771 165 DVENVEYISTDKGY------VYVVVVVLK-ELSDEVEEELKKLGFERLEleEEGTPSELIREIKEELEEIEKERESLLEE 237
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1767287514 839 IKghqGKITHLENELHSRSGEIEklndlnqrLQKEKQDILNQKLK------LDG-----DVQALKETIRKLENE 901
Cdd:PRK05771 238 LK---ELAKKYLEELLALYEYLE--------IELERAEALSKFLKtdktfaIEGwvpedRVKKLKELIDKATGG 300
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1078-1524 |
5.08e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1078 KIREVNDRWKRELERLENEK--------------DDLERRIRELEDELSQIGRGND---KTENDITELKRKHAAEIDKLK 1140
Cdd:pfam01576 265 KIRELEAQISELQEDLESERaarnkaekqrrdlgEELEALKTELEDTLDTTAAQQElrsKREQEVTELKKALEEETRSHE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1141 SDISALHDKHLSDLDDEKEQygkaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK-- 1218
Cdd:pfam01576 345 AQLQEMRQKHTQALEELTEQ----LEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQar 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1219 -DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDE--- 1294
Cdd:pfam01576 421 lSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDErns 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1295 -------------------------LADTKGNLVQKEM--------------DLESTQNRLRSLEDQHSTLQSDANKWRG 1335
Cdd:pfam01576 501 lqeqleeeeeakrnverqlstlqaqLSDMKKKLEEDAGtlealeegkkrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQ 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1336 ELDAALRENDILKSNNTNMEtdltrlkNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKtkqadhlnqlasqfDTKLT 1415
Cdd:pfam01576 581 ELDDLLVDLDHQRQLVSNLE-------KKQKKFDQMLAEEKAISARYAEERDRAEAEAREK--------------ETRAL 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1416 KLRNELQDTNDKLITSDTERNALRNELQKL----------SQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAL 1485
Cdd:pfam01576 640 SLARALEEALEAKEELERTNKQLRAEMEDLvsskddvgknVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLE 719
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1767287514 1486 QELEARKYEIN-DLTSRLDSTEQRLATLQQDYIKADSERD 1524
Cdd:pfam01576 720 VNMQALKAQFErDLQARDEQGEEKRRQLVKQVRELEAELE 759
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
457-726 |
5.11e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.43 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 457 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaQDSEKNvdgtvsiKRTRSLspgktplppSEALRAVRNTF 536
Cdd:COG1340 5 ELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAE--KRDELN-------AQVKEL---------REEAQELREKR 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 537 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKqfadAKREISNLQKSVDEAER----------NSRRTDDKL 606
Cdd:COG1340 67 DELNEKVKELKEERDELNEKLNELREELDELRKELAELNK----AGGSIDKLRKEIERLEWrqqtevlspeEEKELVEKI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 607 RASEAERVAAEKARKfLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLLRENNRLKSEVN 686
Cdd:COG1340 143 KELEKELEKAKKALE-KNEKLKELRAELKELR-KEAEEIHKKIKELAEEAQ-ELHEEMIELYKEADELRKEADELHKEIV 219
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1767287514 687 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKD 726
Cdd:COG1340 220 EAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKRE 259
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1701-1845 |
5.27e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1701 INQKETRYRNIEDNLQDAEEERRALESRLQ---------SAKTLLRSQE--EALKQRDEERRQMKSKmvaAELQARGKEA 1769
Cdd:PRK04863 937 FEQLKQDYQQAQQTQRDAKQQAFALTEVVQrrahfsyedAAEMLAKNSDlnEKLRQRLEQAEQERTR---AREQLRQAQA 1013
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1770 QLRHLNEqlknLRTDLDNAHTDIRSLRDK----------------EEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1833
Cdd:PRK04863 1014 QLAQYNQ----VLASLKSSYDAKRQMLQElkqelqdlgvpadsgaEERARARRDELHARLSANRSRRNQLEKQLTFCEAE 1089
|
170
....*....|..
gi 1767287514 1834 RQILTEKIKELD 1845
Cdd:PRK04863 1090 MDNLTKKLRKLE 1101
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1918-2284 |
5.33e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 5.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1918 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTETDLRQQLETAknEKRVATKE 1997
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKLQAEIAEA--EAEIEERR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1998 lEDLKRRLAQLENERRNSSQL-----SDGWKkekiTLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMErenkely 2072
Cdd:COG3883 86 -EELGERARALYRSGGSVSYLdvllgSESFS----DFLDRLSALSKIADADADLLEELKADKAELEAKKAELE------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2073 kncaqlqqqiaqlemengnrileltnKQREEQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQLDGERR 2152
Cdd:COG3883 154 --------------------------AKLAELEALKAELEAAKAELEAQQAEQE----ALLAQLSAEEAAAEAQLAELEA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2153 RRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTPPLGSSTPTHRPHVTDFRSAVD 2232
Cdd:COG3883 204 ELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAG 283
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 2233 AG-SSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2284
Cdd:COG3883 284 GGaGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGG 336
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1192-1516 |
5.37e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.25 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1192 RENELE--REKRD-----YDE------KINSLYGQ-NQKIKDEWDD-FRNDADKEIQKWKTDAYTVRSEAKALETTNTAL 1256
Cdd:COG3096 783 REKRLEelRAERDelaeqYAKasfdvqKLQRLHQAfSQFVGGHLAVaFAPDPEAELAALRQRRSELERELAQHRAQEQQL 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1257 KAQLQAANDRIDHLTKTV-NDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrg 1335
Cdd:COG3096 863 RQQLDQLKEQLQLLNKLLpQANLLADETLADRLEELREELDAAQ----EAQAFIQQHGKALAQLEPLVAVLQSDP----- 933
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1336 eldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSH--------AKTEKERLQNAFREKTKQADhlnQLA 1407
Cdd:COG3096 934 ------EQFEQLQADYLQAKEQQRRLKQQI----FALSEVVQRRPHfsyedavgLLGENSDLNEKLRARLEQAE---EAR 1000
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1408 SQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDeyqTTIDDLAHSHRvseDSRLNALQE 1487
Cdd:COG3096 1001 REAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQEL----EELGVQAD---AEAEERARIRR---DELHEELSQ 1070
|
330 340 350
....*....|....*....|....*....|...
gi 1767287514 1488 LEARKYEIN-DLTSR---LDSTEQRLATLQQDY 1516
Cdd:COG3096 1071 NRSRRSQLEkQLTRCeaeMDSLQKRLRKAERDY 1103
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1087-1470 |
5.41e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.75 E-value: 5.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1087 KRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHaaeiDKLKSDISA----------LHDKHLSDLDD 1156
Cdd:PRK04778 104 KHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLY----RELRKSLLAnrfsfgpaldELEKQLENLEE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1157 EKEQYGKAVEN-----LKSVEDDLRDKLNNLEKQLADSLNRENELEREkrdYDEKINSL-YGQNQKIKDEWDDFRNDADK 1230
Cdd:PRK04778 180 EFSQFVELTESgdyveAREILDQLEEELAALEQIMEEIPELLKELQTE---LPDQLQELkAGYRELVEEGYHLDHLDIEK 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1231 EIQKWKTDAYTVRSEAKALETTNTalKAQLQAANDRIDHLTKTV-------NDHTSKVRDLTSQVRHLEDELADTKGNL- 1302
Cdd:PRK04778 257 EIQDLKEQIDENLALLEELDLDEA--EEKNEEIQERIDQLYDILerevkarKYVEKNSDTLPDFLEHAKEQNKELKEEId 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1303 -VQK-----EMDLESTqnrlRSLEDQHSTLQSDANkwrgELDAALRENDILKSnntnmetdltrlknrlkSAEDALKELK 1376
Cdd:PRK04778 335 rVKQsytlnESELESV----RQLEKQLESLEKQYD----EITERIAEQEIAYS-----------------ELQEELEEIL 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1377 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTN---------DKLITSDTERNALRNELqklsQ 1447
Cdd:PRK04778 390 KQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKSNlpglpedylEMFFEVSDEIEALAEEL----E 465
|
410 420
....*....|....*....|...
gi 1767287514 1448 ELKFGNEQIQRKSDEYQTTIDDL 1470
Cdd:PRK04778 466 EKPINMEAVNRLLEEATEDVETL 488
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1657-1962 |
5.44e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 5.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1657 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL 1736
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1737 RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRES 1816
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAE 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1817 DSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKvqdmKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLL 1896
Cdd:COG4372 198 KEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLAL----SALLDALELEEDKEELLEEVILKEIEELELAILVEKDT 273
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1767287514 1897 KDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDR 1962
Cdd:COG4372 274 EEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAEL 339
|
|
| Rabaptin |
pfam03528 |
Rabaptin; |
1172-1536 |
5.50e-03 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 41.63 E-value: 5.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1172 EDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALET 1251
Cdd:pfam03528 3 DEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1252 TNTALKAQLQAANDRI-----DHLTKTVNDHTSKVRDLTSQVRH-LEDELAdtKGNLVQKEMDLESTQNRLRSLEDQH-S 1324
Cdd:pfam03528 83 VATVSENTKQEAIDEVksqwqEEVASLQAIMKETVREYEVQFHRrLEQERA--QWNQYRESAEREIADLRRRLSEGQEeE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1325 TLQSDANKwrgeldaALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNS----LSHA------------------ 1382
Cdd:pfam03528 161 NLEDEMKK-------AQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASkmkeLNHYleaekscrtdlemyvavl 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1383 KTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS------DTER--NALRNELQKLSQELKFGN- 1453
Cdd:pfam03528 234 NTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESqrllmrDMQRmeSVLTSEQLRQVEEIKKKDq 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1454 --EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQElearKYEINDLTSRLDSTEQRLATLQQDYIKADS-----ERDIL 1526
Cdd:pfam03528 314 eeHKRARTHKEKETLKSDREHTVSIHAVFSPAGVET----SAPLSNVEEQINSAHGSVHSLDTDVVLGAGdsfnkQEDPF 389
|
410
....*....|
gi 1767287514 1527 SDALRRFQSS 1536
Cdd:pfam03528 390 KEGLRRAQST 399
|
|
| HemX |
COG2959 |
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis ... |
810-907 |
5.61e-03 |
|
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis) [General function prediction only];
Pssm-ID: 442199 [Multi-domain] Cd Length: 361 Bit Score: 41.49 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 810 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD------------I 877
Cdd:COG2959 61 ELAQLAQQLAALQQQAQELRALAQQLQELLQQLAARLAQLEQRLAELQQQLAALQQLLQSLSGSSRDdwllaeaeyllrL 140
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1767287514 878 LNQKLKLDGDVQ----ALKE--------------TIRK-LENELEKLRN 907
Cdd:COG2959 141 AGQQLQLEGDVKtalaALQSadarlarlndpsllPVRRaIARDIARLRA 189
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1073-1313 |
5.88e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 41.05 E-value: 5.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1073 ELVEH--KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndKTENDITELKRKhaaEIDKLKSDISALHDKH 1150
Cdd:COG1340 54 ELREEaqELREKRDELNEKVKELKEERDELNEKLNELREELDEL-----RKELAELNKAGG---SIDKLRKEIERLEWRQ 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1151 L-SDLDDEKEQygKAVENLKSVEDDL--RDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND 1227
Cdd:COG1340 126 QtEVLSPEEEK--ELVEKIKELEKELekAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1228 ADKeiqkwktdaytVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEM 1307
Cdd:COG1340 204 ADE-----------LRKEAD-------ELHKEIVEAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKREKEKEEL 265
|
....*.
gi 1767287514 1308 DLESTQ 1313
Cdd:COG1340 266 EEKAEE 271
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1148-1292 |
5.91e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 41.16 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1148 DKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQladsLNRENELEREKRDYDEkiNSLYGQNQKIKDEwddfrnd 1227
Cdd:smart00787 150 DENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEE----LRQLKQLEDELEDCDP--TELDRAKEKLKKL------- 216
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1767287514 1228 aDKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVND---HT-SKVRDLTSQVRHLE 1292
Cdd:smart00787 217 -LQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQcrgFTfKEIEKLKEQLKLLQ 284
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1258-1500 |
5.98e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1258 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL 1337
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1338 DAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAfREKTKQADHLNQLASQFDTKLTKL 1417
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQE-LQALSEAEAEQALDELLKEANRNA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1418 RNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEIND 1497
Cdd:COG4372 197 EKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEE 276
|
...
gi 1767287514 1498 LTS 1500
Cdd:COG4372 277 ELE 279
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
638-757 |
6.02e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.77 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 638 STDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqIRYSD 717
Cdd:COG2433 389 ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERRE---IRKDR 465
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1767287514 718 DIRRnIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHL 757
Cdd:COG2433 466 EISR-LDREIERLERELEEERERIEELKRKLERLKELWKL 504
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
543-751 |
6.45e-03 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 40.78 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 543 IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraSEAERVA--AEKAR 620
Cdd:pfam00261 3 MQQIKEELDEAEERLKEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKL--EEAEKAAdeSERGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 621 KFLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQEEFKT------RIDELNRRVENLLRE-NNRLKSEVNPLK-- 689
Cdd:pfam00261 81 KVLENRALKDEEKmeILEAQLKEAKEIAEEADRKYEEVARKLVVvegdleRAEERAELAESKIVElEEELKVVGNNLKsl 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 690 ----DKYRDLENEYNSTQRRIEE--KETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEKILGELEHA 751
Cdd:pfam00261 161 easeEKASEREDKYEEQIRFLTEklKEAETRAEFAERSvqKLEKEVDRLEDELEAEKEKYKAISEELDQT 230
|
|
| DUF4686 |
pfam15742 |
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins ... |
1907-2147 |
6.62e-03 |
|
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins in this family are typically between 498 and 775 amino acids in length. There is a conserved DLK sequence motif.
Pssm-ID: 464838 [Multi-domain] Cd Length: 384 Bit Score: 41.20 E-value: 6.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1907 LNGANNRKQQLenellNVRSEVRDYKQRVHDVNNRVSELQRQLQDAntEKNRVEDRFLS----VEKVVNTMRTTETDLRQ 1982
Cdd:pfam15742 100 LKQAQSIKSQN-----SLQEKLAQEKSRVADAEEKILELQQKLEHA--HKVCLTDTCILekkqLEERIKEASENEAKLKQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1983 QLETAKNEKRVATKELEDLKRRLAQLEN-----ERRNSSQLSDGWKKEkiTLLKKielLENEKRRTDAAIRetaLQREAI 2057
Cdd:pfam15742 173 QYQEEQQKRKLLDQNVNELQQQVRSLQDkeaqlEMTNSQQQLRIQQQE--AQLKQ---LENEKRKSDEHLK---SNQELS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 2058 EKsLNAMERENKELYKNCAQLQQQIAQlEMENGNrileltnkqrEEQERQLIRMRQEKGQIEKVIENRERthrnRIKQLE 2137
Cdd:pfam15742 245 EK-LSSLQQEKEALQEELQQVLKQLDV-HVRKYN----------EKHHHHKAKLRRAKDRLVHEVEQRDE----RIKQLE 308
|
250
....*....|
gi 1767287514 2138 DQIAILRDQL 2147
Cdd:pfam15742 309 NEIGILQQQS 318
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1344-1450 |
6.78e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.25 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1344 NDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAF-REKTKQADHLNQLASQFDTKLTKLRNELQ 1422
Cdd:TIGR04320 242 NKFDKTPIPNPPNSLAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYaAAQAALATAQKELANAQAQALQTAQNNLA 321
|
90 100
....*....|....*....|....*...
gi 1767287514 1423 DTNDKLITSDTERNALRNELQKLSQELK 1450
Cdd:TIGR04320 322 TAQAALANAEARLAKAKEALANLNADLA 349
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1096-1202 |
6.94e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.61 E-value: 6.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1096 EKDDLERRIRELEDELSQIGRgndktENDITELKRKHA--AEIDKLKSDISALHDKHLSdlddEKEQYGKaVENLKSVED 1173
Cdd:COG0542 412 ELDELERRLEQLEIEKEALKK-----EQDEASFERLAElrDELAELEEELEALKARWEA----EKELIEE-IQELKEELE 481
|
90 100
....*....|....*....|....*....
gi 1767287514 1174 DLRDKLNNLEKQLADSLNRENELEREKRD 1202
Cdd:COG0542 482 QRYGKIPELEKELAELEEELAELAPLLRE 510
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1050-1538 |
7.03e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 7.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1050 TITNTKERIERIEKNILDRYHDDELVEHKIR------EVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEn 1123
Cdd:TIGR00618 216 TYHERKQVLEKELKHLREALQQTQQSHAYLTqkreaqEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1124 diTELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlRDKLNNLEKQlADSLNRENELEREKRDY 1203
Cdd:TIGR00618 295 --LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQ-RRLLQTLHSQ-EIHIRDAHEVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1204 DEKINSL---YGQNQKIKDEWDDFRNDADKEIQKWKTDAYTV---RSEAKALETTNTALKAQLQAANDRID----HLTKT 1273
Cdd:TIGR00618 371 SCQQHTLtqhIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtrTSAFRDLQGQLAHAKKQQELQQRYAElcaaAITCT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1274 VNDHTSKVRDLTSQVRHL--EDELADTKGNLVQKEMdlESTQNRLRSLEdQHSTLQSDANKWRGELDAALRENDILKSNN 1351
Cdd:TIGR00618 451 AQCEKLEKIHLQESAQSLkeREQQLQTKEQIHLQET--RKKAVVLARLL-ELQEEPCPLCGSCIHPNPARQDIDNPGPLT 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1352 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDtkltKLRNELQDTNDKLITS 1431
Cdd:TIGR00618 528 RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP----NLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1432 DTERNALRNELQKL---------SQELKFGNEQIQRKSDEYQTTIDDLA----------HSHRVSED------SRLNALQ 1486
Cdd:TIGR00618 604 SEAEDMLACEQHALlrklqpeqdLQDVRLHLQQCSQELALKLTALHALQltltqervreHALSIRVLpkellaSRQLALQ 683
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1767287514 1487 ELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1538
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLA 735
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1825-1955 |
7.17e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 7.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1825 LQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI------QSKTSHEYQLLkd 1898
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgNVRNNKEYEAL-- 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 1899 qllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE 1955
Cdd:COG1579 95 -----QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
246-744 |
7.91e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 7.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 246 NANYEMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLR-----------REFERYANDSKDKEKTFINRERNLAQY 314
Cdd:PRK01156 245 SSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIIndpvyknrnyiNDYFKYKNDIENKKQILSNIDAEINKY 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 315 lSDEQRKMLDL---WTELQRVRKQFSDLKtHTEEDLDKQKAEFTRAIRNVNNIsrnaafsagagdglglygledggdvNR 391
Cdd:PRK01156 325 -HAIIKKLSVLqkdYNDYIKKKSRYDDLN-NQILELEGYEMDYNSYLKSIESL-------------------------KK 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 392 TTNNYEKVFIETIKRMNGTGGAGSASSADLLEELRKIRGG----GSSEGDAELHKELMTKYEESIERNIE-LESRG---- 462
Cdd:PRK01156 378 KIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKlqdiSSKVSSLNQRIRALRENLDELSRNMEmLNGQSvcpv 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 463 -------DDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLspgktplppsealravrnT 535
Cdd:PRK01156 458 cgttlgeEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSI------------------N 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 536 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREI---SNLQKSVDEAERNSRRTDDKlraseae 612
Cdd:PRK01156 520 EYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwlnALAVISLIDIETNRSRSNEI------- 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 613 rvaaEKARKFLEDELAKLQASFQ--KSSTDDA-RKLRDEMDEHTNSIQE--EFKTRIDELNRRVENLLRENNRLKSevnp 687
Cdd:PRK01156 593 ----KKQLNDLESRLQEIEIGFPddKSYIDKSiREIENEANNLNNKYNEiqENKILIEKLRGKIDNYKKQIAEIDS---- 664
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1767287514 688 lkdkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 744
Cdd:PRK01156 665 -------IIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINEL 714
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
246-356 |
8.37e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.26 E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 246 NANYEMIARLDEERRRSDEYRMQWENERQKSLSL--EDENDRLRREFERYANDSKDKEKTFINReRNLAQYLSDEQRKML 323
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQVERlrQQEEERKRKKLELEKEKRDRKRAEEQRR-KILEKELEERKQAMI 509
|
90 100 110
....*....|....*....|....*....|...
gi 1767287514 324 DLWTELQRVRKQFSDLKTHTEEDLDKQKAEFTR 356
Cdd:pfam17380 510 EEERKRKLLEKEMEERQKAIYEEERRREAEEER 542
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1083-1527 |
8.64e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.31 E-value: 8.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1083 NDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEiDKLKSDISALHDKHLSDLDDEKEQyg 1162
Cdd:pfam01576 147 NSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQEQ-- 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1163 kaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDD---FRNDADKEIQKWKTDA 1239
Cdd:pfam01576 224 --IAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESeraARNKAEKQRRDLGEEL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1240 YTVRSEakaLETT--NTALKAQLQAANDR-IDHLTKTVND----HTSKVRDL----TSQVRHLEDELADTKGNLVqkemd 1308
Cdd:pfam01576 302 EALKTE---LEDTldTTAAQQELRSKREQeVTELKKALEEetrsHEAQLQEMrqkhTQALEELTEQLEQAKRNKA----- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1309 lestqnrlrSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKER 1388
Cdd:pfam01576 374 ---------NLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELES 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1389 LQNAFREKTKQADHLNQLASQFDTKLTKLRNELQ-DTNDKLITS------DTERNALRNELQKLSQELKFGNEQI---QR 1458
Cdd:pfam01576 445 VSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQeETRQKLNLStrlrqlEDERNSLQEQLEEEEEAKRNVERQLstlQA 524
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1767287514 1459 KSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDY----IKADSERDILS 1527
Cdd:pfam01576 525 QLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELddllVDLDHQRQLVS 597
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1347-1536 |
9.02e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 9.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1347 LKSNNTNMETDLTRLKNRLKSAEDALKELKNSlshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTND 1426
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKK---NGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSA 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 1427 KLITSDTERNALRNELQKLSQELKFGNE-------------------QIQRKSDEYQTTIDDLahshrvsedsrLNALQE 1487
Cdd:PHA02562 256 ALNKLNTAAAKIKSKIEQFQKVIKMYEKggvcptctqqisegpdritKIKDKLKELQHSLEKL-----------DTAIDE 324
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1767287514 1488 LEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSS 1536
Cdd:PHA02562 325 LEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAE 373
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
643-971 |
9.26e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 40.97 E-value: 9.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 643 RKLRDEMDeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLeneynstQRRIEEKETQirYSDDIRrN 722
Cdd:PRK04778 101 RKAKHEIN-EIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYREL-------RKSLLANRFS--FGPALD-E 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 723 IQKDLDDLREKYDRVHTDNEKilGELEHAQKAAHLAEQQLKEIKIQRDD----YQKQKDEHARHLFDIRHkleteikGRQ 798
Cdd:PRK04778 170 LEKQLENLEEEFSQFVELTES--GDYVEAREILDQLEEELAALEQIMEEipelLKELQTELPDQLQELKA-------GYR 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 799 DLEKNGARnndeLDKLrqtisDYESQINLLRRHNDELDTTIKghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDIL 878
Cdd:PRK04778 241 ELVEEGYH----LDHL-----DIEKEIQDLKEQIDENLALLE--ELDLDEAEEKNEEIQERIDQLYDILEREVKARKYVE 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767287514 879 NQKLKLDGDVQALKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRanlLNKELEDTKQDLKHSTDVNKQLEQDI 958
Cdd:PRK04778 310 KNSDTLPDFLEHAKEQNKELKEEIDRV-KQSYTLNESELESVRQLEKQLES---LEKQYDEITERIAEQEIAYSELQEEL 385
|
330
....*....|...
gi 1767287514 959 RDLKERLANIGKG 971
Cdd:PRK04778 386 EEILKQLEEIEKE 398
|
|
| |
