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Conserved domains on  [gi|1831519346|ref|NP_001368073|]
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TOG domain-containing protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 219-361 1.32e-08

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 1.32e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  219 SAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPnfgkPRAA 298
Cdd:PHA03247  2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR----RLTR 2785

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346  299 VAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PHA03247  2786 PAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
YCG1 super family cl34945
Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell ...
 101-165 9.45e-04

Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5218:

Pssm-ID: 227543 [Multi-domain]  Cd Length: 885  Bit Score: 41.50  E-value: 9.45e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346 101 KNPQARQQTALFLSRFFAKNDPKIVETEE-VKQLAEHILKTSNDADKEVRKAALRIVAAVQKCLGE 165
Cdd:COG5218    59 KNPSIPDRILSFLKRFFEYDMPDDPEGEElVAGTFYHLLRGTESKDKKVRKRSLQILALLSDVVRE 124
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 219-361 1.32e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 1.32e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  219 SAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPnfgkPRAA 298
Cdd:PHA03247  2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR----RLTR 2785

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346  299 VAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PHA03247  2786 PAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
YCG1 COG5218
Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell ...
 101-165 9.45e-04

Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning];


Pssm-ID: 227543 [Multi-domain]  Cd Length: 885  Bit Score: 41.50  E-value: 9.45e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346 101 KNPQARQQTALFLSRFFAKNDPKIVETEE-VKQLAEHILKTSNDADKEVRKAALRIVAAVQKCLGE 165
Cdd:COG5218    59 KNPSIPDRILSFLKRFFEYDMPDDPEGEElVAGTFYHLLRGTESKDKKVRKRSLQILALLSDVVRE 124
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 181-358 1.35e-03

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 40.97  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 181 KTEKLPPLIEELEKEFESSASPEMLRLAKHYKIGSSS---TSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKA 257
Cdd:pfam08580 428 KTPGSSPPSSVIMTPVNKGSKTPSSRRGSSFDFGSSServINSKLRRESKLPQIASTLKQTKRPSKIPRASPNHSGFLST 507

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 258 PVVAPTrrAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVA-----PARAPQITQRAPAATRPATSAIRVI------- 325
Cdd:pfam08580 508 PSNTAT--SETPTPALRPPSRPQPPPPGNRPRWNASTNTNDLDvghnfKPLTLTTPSPTPSRSSRSSSTLPPVsplsrdk 585

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1831519346 326 -----PIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAP 358
Cdd:pfam08580 586 srspaPTCRSVSRASRRRASRKPTRIGSPNSRTSLLDE 623
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 219-361 1.32e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 1.32e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  219 SAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPnfgkPRAA 298
Cdd:PHA03247  2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR----RLTR 2785

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346  299 VAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PHA03247  2786 PAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP 2848
PHA03247 PHA03247
large tegument protein UL36; Provisional
 215-367 1.22e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 1.22e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  215 SSSTSAPPKTAAGAPKRLSSAVAPRRA-PPASAAPTRRAPSPKAPVVAPTRRA-PSPKAPVAPVAPVKPKPFVARPAPNF 292
Cdd:PHA03247  2635 ANEPDPHPPPTVPPPERPRDDPAPGRVsRPRRARRLGRAAQASSPPQRPRRRAaRPTVGSLTSLADPPPPPPTPEPAPHA 2714

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1831519346  293 GKPRAAVAPARAPQITQRAPAATRPATSAIRVIPIAPnvvrnGAPAAPrkpieiARPQTSSGIAAPGAPRSRIGT 367
Cdd:PHA03247  2715 LVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP-----GGPARP------ARPPTTAGPPAPAPPAAPAAG 2778
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
220-364 2.99e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 52.54  E-value: 2.99e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 220 APPKTAAGAPKRLSSAVAPRRAPP----ASAAPTRRAPSPKAPVVAPTRRAPSPKApVAPVAPVKPKPFVARPAPnfgkp 295
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPApgarAAAAVGASAVPAVTAVTGAAGAALAPKA-AAAAAATRAEAPPAAPAP----- 432

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831519346 296 raavaparapqiTQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAPRSR 364
Cdd:PRK07003  433 ------------PATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAA 489
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
215-361 4.89e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 51.77  E-value: 4.89e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 215 SSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA---PSPKAPVAPVAPVKPKPFVARPAPN 291
Cdd:PRK07003  387 AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRgddAADGDAPVPAKANARASADSRCDER 466

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1831519346 292 FGKPRAAVAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGA-PAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PRK07003  467 DAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARaPAAASREDAPAAAAPPAPEARPPTP 537
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 215-326 6.13e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 51.25  E-value: 6.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 215 SSSTSAPPKTAAGAPKRLSSAV---APRRAPPA--SAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPvAPVKPKPFVARPA 289
Cdd:PRK14951  377 EKKTPARPEAAAPAAAPVAQAAaapAPAAAPAAaaSAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP-AAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1831519346 290 PNFGKPRAAVAPARAPQITQRAPAATRPATSAIRVIP 326
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 188-283 8.00e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 51.43  E-value: 8.00e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  188 LIEELEKEFE---SSASPEMLRLAKHYKIGSSSTSAPPkTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTR 264
Cdd:PRK12270    10 LVEEMYQQYLadpNSVDPSWREFFADYGPGSTAAPTAA-AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAA 88

                           90
                   ....*....|....*....
gi 1831519346  265 RAPSPKAPVAPVAPVKPKP 283
Cdd:PRK12270    89 AAAAAAAPAAPPAAAAAAA 107
PHA03247 PHA03247
large tegument protein UL36; Provisional
 214-350 1.21e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.71  E-value: 1.21e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  214 GSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPS-PKAPVVAPTRRAPSPKAP---------VAPVAPVKPKP 283
Cdd:PHA03247  2765 GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAdPPAAVLAPAAALPPAASPagplppptsAQPTAPPPPPG 2844

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1831519346  284 FVARPAPNFGkpraavAPARAPQITQRAPAATRPATSAirvIPIAPNVVRNGAPAAPRKPIEIARPQ 350
Cdd:PHA03247  2845 PPPPSLPLGG------SVAPGGDVRRRPPSRSPAAKPA---APARPPVRRLARPAVSRSTESFALPP 2902
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 221-348 1.29e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.48  E-value: 1.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 221 PPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPtrrAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVA 300
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAP---AAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1831519346 301 PARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIAR 348
Cdd:PRK14951  443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
214-373 3.98e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.72  E-value: 3.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 214 GSSSTSAPPKTAAGAPKRLSSAVAP--RRAPPAS--AAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPF----- 284
Cdd:PRK12323  420 AAAPARRSPAPEALAAARQASARGPggAPAPAPApaAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDdpppw 499

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 285 ----VARPAPNFGKPRAAVAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRngaPAAPRKPIEIARPqtssgiaaPGA 360
Cdd:PRK12323  500 eelpPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPR---AAAATEPVVAPRP--------PRA 568

                         170
                  ....*....|...
gi 1831519346 361 PRSRIGTKFGWKW 373
Cdd:PRK12323  569 SASGLPDMFDGDW 581
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 179-363 8.74e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 47.76  E-value: 8.74e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 179 KLKTEKLPPLIEE-LEKEFESSASPEMLRL---AKHYKIGSSSTSAPPKTA-----AGAPKRLSSAVAPRRAPPA----- 244
Cdd:PTZ00449  490 KKSKKKLAPIEEEdSDKHDEPPEGPEASGLppkAPGDKEGEEGEHEDSKESdepkeGGKPGETKEGEVGKKPGPAkehkp 569

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 245 SAAP--TRRAPSPKAPvvAPTRRAPSPKAPVAPVAPVKPkpfVARPAPnfgkpraavaparapqitQRAPAATRPATSAI 322
Cdd:PTZ00449  570 SKIPtlSKKPEFPKDP--KHPKDPEEPKKPKRPRSAQRP---TRPKSP------------------KLPELLDIPKSPKR 626

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1831519346 323 RVIPIAPNvvrngAPAAPRKPIEIARPQTSSGIAAPGAPRS 363
Cdd:PTZ00449  627 PESPKSPK-----RPPPPQRPSSPERPEGPKIIKSPKPPKS 662
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
214-362 4.51e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 45.61  E-value: 4.51e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 214 GSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPvvAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFG 293
Cdd:PRK07003  441 DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP--PDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831519346 294 KPRAAVAPARAPQITQRAPAATRP------ATSAIRVIPIAPNVV---RNGAPAAPRKPieiARPQTSSgiAAPGAPR 362
Cdd:PRK07003  519 EDAPAAAAPPAPEARPPTPAAAAPaaraggAAAALDVLRNAGMRVssdRGARAAAAAKP---AAAPAAA--PKPAAPR 591
PHA03247 PHA03247
large tegument protein UL36; Provisional
 215-363 4.54e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 4.54e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  215 SSSTSAPPKTAAGAPKRLSSAVAPRRAPPA--SAAPTRRAPSPKAPVVAPTRRA-PSPKAPVAPVAPVKPK----PFVAR 287
Cdd:PHA03247  2744 VPAGPATPGGPARPARPPTTAGPPAPAPPAapAAGPPRRLTRPAVASLSESRESlPSPWDPADPPAAVLAPaaalPPAAS 2823

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346  288 PAPnfGKPRAAVAPARAPQITQRAPAATRPATSAirVIPIAPNVVRNGAPAAPRKPIEIARPQTSSgIAAPGAPRS 363
Cdd:PHA03247  2824 PAG--PLPPPTSAQPTAPPPPPGPPPPSLPLGGS--VAPGGDVRRRPPSRSPAAKPAAPARPPVRR-LARPAVSRS 2894
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 234-361 5.41e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.09  E-value: 5.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 234 SAVAPRRAPPASAAPTRraPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPfVARPAPnfgkpraaVAPARAPQITQRAPA 313
Cdd:PRK14951  367 AAAAEAAAPAEKKTPAR--PEAAAPAAAPVAQAAAAPAPAAAPAAAASAP-AAPPAA--------APPAPVAAPAAAAPA 435

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1831519346 314 ATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PRK14951  436 AAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP 483
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
241-361 6.26e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 45.25  E-value: 6.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 241 APPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVAPARAPQITQRAPAATRPATS 320
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1831519346 321 AIRVIPIApnVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PRK12323  453 APAAAPAA--AARPAAAGPRPVAAAAAAAPARAAPAAAPAP 491
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 191-294 6.33e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 44.93  E-value: 6.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 191 ELEKEFESSASPEmLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAP---TRRAP 267
Cdd:PRK14954  352 ELKFQFEYQFRFE-LALLRLIELVRNDGGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPspaSAPTP 430

                          90       100
                  ....*....|....*....|....*..
gi 1831519346 268 SPKAPVAPVAPVKPKPfVARPAPNFGK 294
Cdd:PRK14954  431 EQQPPVARSAPLPPSP-QASAPRNVAS 456
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 214-364 7.01e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.98  E-value: 7.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 214 GSSSTSAPPKTAAGAPkrlsSAVAPRRAPPASAAPTRRAPSPKAPVVAPtrrAPSPKAPVAPVAPVKPKPFVARPAPnfg 293
Cdd:PRK07764  391 AGAPAAAAPSAAAAAP----AAAPAPAAAAPAAAAAPAPAAAPQPAPAP---APAPAPPSPAGNAPAGGAPSPPPAA--- 460

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1831519346 294 kpraavaparaPQITQRAPAATRPATSAIRVIPIAPNVVRngAPAAPRKPieiARPQTSSGIAAPGAPRSR 364
Cdd:PRK07764  461 -----------APSAQPAPAPAAAPEPTAAPAPAPPAAPA--PAAAPAAP---AAPAAPAGADDAATLRER 515
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
216-349 7.65e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.87  E-value: 7.65e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 216 SSTSAPPKTAAGAPKRLSSAVAPRRAPPAS-AAPTRRAPSPKAPVVAPTRRAPSPKA-PVAPVAPVKPKPFVARPAPnfg 293
Cdd:PRK12323  376 TAAAAPVAQPAPAAAAPAAAAPAPAAPPAApAAAPAAAAAARAVAAAPARRSPAPEAlAAARQASARGPGGAPAPAP--- 452

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346 294 kpraavaparaPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARP 349
Cdd:PRK12323  453 -----------APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP 497
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 214-364 1.32e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 214 GSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPnfg 293
Cdd:PRK07764  637 AEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ--- 713

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1831519346 294 kpraavAPARAPQITQRAPAATRPATSAIRVIPIAPnvvRNGAPAAPRKPIEIARPQTSSGIAAPGAPRSR 364
Cdd:PRK07764  714 ------ADDPAAQPPQAAQGASAPSPAADDPVPLPP---EPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 204-290 1.33e-04

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 43.75  E-value: 1.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 204 MLR-LAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKapvaPVAPVKPK 282
Cdd:PRK01297    1 MLKaLKKIFGKGEAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPK----PASLWKLE 76


                  ....*...
gi 1831519346 283 PFVARPAP 290
Cdd:PRK01297   77 DFVVEPQE 84
PHA03247 PHA03247
large tegument protein UL36; Provisional
 226-358 1.52e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.52e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  226 AGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVV-APTRRAPSPKAPVAPVAPVKPKPFVARPAPNfgKPRAAVAPARA 304
Cdd:PHA03247  2548 AGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVtSRARRPDAPPQSARPRAPVDDRGDPRGPAPP--SPLPPDTHAPD 2625

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1831519346  305 PQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAP 358
Cdd:PHA03247  2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP 2679
PHA03379 PHA03379
EBNA-3A; Provisional
 238-350 4.25e-04

EBNA-3A; Provisional


Pssm-ID: 223066 [Multi-domain]  Cd Length: 935  Bit Score: 42.35  E-value: 4.25e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 238 PRRAPPASAAPtrrAPSPKAPVVAPTRRAPSPKAPVAPvAPVKPKPFVARPAPNFGKPRAAVAPARAPQITQRAPAAT-- 315
Cdd:PHA03379  487 VVQDGRPACAP---VPAPAGPIVRPWEASLSQVPGVAF-APVMPQPMPVEPVPVPTVALERPVCPAPPLIAMQGPGETsg 562

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1831519346 316 -RPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQ 350
Cdd:PHA03379  563 iVRVRERWRPAPWTPNPPRSPSQMSVRDRLARLRAE 598
PHA03378 PHA03378
EBNA-3B; Provisional
 214-360 6.69e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.98  E-value: 6.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 214 GSSSTSAPPKTAAGAPKRlsSAVAPRRAPPASAAPTRRAPSPKA------PVVAPTRRAPSPKAPVAPVAPVKPKpfvAR 287
Cdd:PHA03378  719 AATGRARPPAAAPGRARP--PAAAPGRARPPAAAPGRARPPAAApgrarpPAAAPGAPTPQPPPQAPPAPQQRPR---GA 793

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346 288 PAPnfgkPRAAVAPARAPQITQRAPAATRPATSAIrVIPIAPNVVRNGAPAApRKPIEIARPQTSSGIAAPGA 360
Cdd:PHA03378  794 PTP----QPPPQAGPTSMQLMPRAAPGQQGPTKQI-LRQLLTGGVKRGRPSL-KKPAALERQAAAGPTPSPGS 860
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 218-363 8.22e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.70  E-value: 8.22e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  218 TSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTR---RAPSPKAPVAPVAPVKPKPFVARPAPNFGK 294
Cdd:PHA03307    69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDpppPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831519346  295 PRAAVAPARAPqitQRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAPRS 363
Cdd:PHA03307   149 AASPPAAGASP---AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPIS 214
PHA03378 PHA03378
EBNA-3B; Provisional
 218-364 8.99e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.59  E-value: 8.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 218 TSAPPKTAAGAPKRlSSAVAPRRAPPASAAPTRR-----APSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPnf 292
Cdd:PHA03378  702 TPMRPPAAPPGRAQ-RPAAATGRARPPAAAPGRArppaaAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQP-- 778

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1831519346 293 gkprAAVAPARAPQITQRAPAATRPATsairvIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAPRSR 364
Cdd:PHA03378  779 ----PPQAPPAPQQRPRGAPTPQPPPQ-----AGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLK 841
valS PRK14900
valyl-tRNA synthetase; Provisional
 187-276 9.40e-04

valyl-tRNA synthetase; Provisional


Pssm-ID: 237855 [Multi-domain]  Cd Length: 1052  Bit Score: 41.52  E-value: 9.40e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  187 PLIEELEKEFES------SASP------EMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVA---PRRAPPASAAPTRR 251
Cdd:PRK14900   940 TVVESAEKAVAAvseaaqQAATavasgiEKVAEAVRKTVRRSVKKAAATRAAMKKKVAKKAPAkkaAAKKAAAKKAAAKK 1019

                           90       100
                   ....*....|....*....|....*
gi 1831519346  252 APSPKAPVVAPTRRAPSPKAPVAPV 276
Cdd:PRK14900  1020 KVAKKAPAKKVARKPAAKKAAKKPA 1044
YCG1 COG5218
Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell ...
 101-165 9.45e-04

Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics / Cell division and chromosome partitioning];


Pssm-ID: 227543 [Multi-domain]  Cd Length: 885  Bit Score: 41.50  E-value: 9.45e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346 101 KNPQARQQTALFLSRFFAKNDPKIVETEE-VKQLAEHILKTSNDADKEVRKAALRIVAAVQKCLGE 165
Cdd:COG5218    59 KNPSIPDRILSFLKRFFEYDMPDDPEGEElVAGTFYHLLRGTESKDKKVRKRSLQILALLSDVVRE 124
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 195-290 1.11e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 41.24  E-value: 1.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 195 EFESSASPEMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVA 274
Cdd:PRK14951  377 EKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAA 456

                          90
                  ....*....|....*.
gi 1831519346 275 PVAPVKPKPFVARPAP 290
Cdd:PRK14951  457 PETVAIPVRVAPEPAV 472
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 238-334 1.22e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 41.03  E-value: 1.22e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  238 PRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPfvARPAPNFGKPRAAVAPARAPQITQRAPAATRP 317
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP--PKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115

                           90
                   ....*....|....*..
gi 1831519346  318 ATSAIRVIPIApnVVRN 334
Cdd:PRK12270   116 EVTPLRGAAAA--VAKN 130
PHA03247 PHA03247
large tegument protein UL36; Provisional
 215-361 1.30e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 1.30e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  215 SSSTSAPPKTAAGAP--KRLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFV-----AR 287
Cdd:PHA03247  2677 SSPPQRPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPAtpggpAR 2756

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831519346  288 PAPNFGKPRAAVAPARAPQITQRAPAATRPATSAIRV----IPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAP 361
Cdd:PHA03247  2757 PARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSEsresLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 181-358 1.35e-03

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 40.97  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 181 KTEKLPPLIEELEKEFESSASPEMLRLAKHYKIGSSS---TSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPKA 257
Cdd:pfam08580 428 KTPGSSPPSSVIMTPVNKGSKTPSSRRGSSFDFGSSServINSKLRRESKLPQIASTLKQTKRPSKIPRASPNHSGFLST 507

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 258 PVVAPTrrAPSPKAPVAPVAPVKPKPFVARPAPNFGKPRAAVA-----PARAPQITQRAPAATRPATSAIRVI------- 325
Cdd:pfam08580 508 PSNTAT--SETPTPALRPPSRPQPPPPGNRPRWNASTNTNDLDvghnfKPLTLTTPSPTPSRSSRSSSTLPPVsplsrdk 585

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1831519346 326 -----PIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAP 358
Cdd:pfam08580 586 srspaPTCRSVSRASRRRASRKPTRIGSPNSRTSLLDE 623
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
219-358 1.44e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.63  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 219 SAPPKTAAGAPKRLSSAVAPrrAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAPNFGKpraa 298
Cdd:PRK12323  396 APAPAAPPAAPAAAPAAAAA--ARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP---- 469

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 299 vaparapqitqRAPAATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAP 358
Cdd:PRK12323  470 -----------RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
215-367 2.09e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.24  E-value: 2.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 215 SSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAA-PTRRAPSPKAPVVAPtrrAPSPKAPVAPVAPVKPKPFVARPAPNfg 293
Cdd:PRK12323  400 AAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAlAAARQASARGPGGAP---APAPAPAAAPAAAARPAAAGPRPVAA-- 474

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 294 kpRAAVAPARAPQITQRAPA-----------ATRPATSAIRVIPIAPNVVRNGAPAAPRKPIEIARPQTSSGIAAPGAPR 362
Cdd:PRK12323  475 --AAAAAPARAAPAAAPAPAdddpppweelpPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPR 552


                  ....*
gi 1831519346 363 SRIGT 367
Cdd:PRK12323  553 AAAAT 557
PRK11633 PRK11633
cell division protein DedD; Provisional
 219-290 2.55e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 38.83  E-value: 2.55e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346 219 SAPPKTAAGAPkRLSSAVAPRRAPPASAAPTrRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVA-RPAP 290
Cdd:PRK11633   65 TQPPEGAAEAV-RAGDAAAPSLDPATVAPPN-TPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPApKPEP 135
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 216-359 3.35e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 39.51  E-value: 3.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 216 SSTSAPPKTAAGAPK-RLSSAVAPRRAPPASA--APTRRAPSPKAPVVAPTRRAPSPK-------APVAPVAP--VKPKP 283
Cdd:pfam05109 481 TTSGASPVTPSPSPRdNGTESKAPDMTSPTSAvtTPTPNATSPTPAVTTPTPNATSPTlgktsptSAVTTPTPnaTSPTP 560

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831519346 284 FVARPAPNfGKPRAAVAPARAPQITQRAPAATRPATSAIRviPIApNVVRNGAPAAPRKPIEIARPQTSSGIAAPG 359
Cdd:pfam05109 561 AVTTPTPN-ATIPTLGKTSPTSAVTTPTPNATSPTVGETS--PQA-NTTNHTLGGTSSTPVVTSPPKNATSAVTTG 632
PHA03247 PHA03247
large tegument protein UL36; Provisional
 215-365 4.02e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.54  E-value: 4.02e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  215 SSSTSAPPKTAAGAPKRLS--SAVAP----RRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARP 288
Cdd:PHA03247  2833 SAQPTAPPPPPGPPPPSLPlgGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQ 2912

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346  289 APNFGKPRAAVAPARAPQITQRAPAATRPatsairviPIAPNVVRNGAPAAprkpiEIARPQTSSGIAAPG---APRSRI 365
Cdd:PHA03247  2913 APPPPQPQPQPPPPPQPQPPPPPPPRPQP--------PLAPTTDPAGAGEP-----SGAVPQPWLGALVPGrvaVPRFRV 2979
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 213-290 4.29e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 39.31  E-value: 4.29e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831519346 213 IGSSSTSAPPKTAAGAPKRLSSAV-APRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKPKPFVARPAP 290
Cdd:PRK14951  399 AAPAPAAAPAAAASAPAAPPAAAPpAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAP 477
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 222-367 4.83e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 38.79  E-value: 4.83e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 222 PKTAAGAPKRLSSAV--APRRAPPASAA---PTRRAPSPKAPVVAPTRRAPSPKAPVAPVAPVKP--KPFVARPAPNFGK 294
Cdd:pfam17823 100 PATREGAADGAASRAlaAAASSSPSSAAqslPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAasAPHAASPAPRTAA 179

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346 295 PRAAVAPARAPQITQRAPAATRPATSAIRVIPIAPNVVRNGAPAAprkpiEIARPQTSSGIAAPGAPRSRIGT 367
Cdd:pfam17823 180 SSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAA-----GTALAAVGNSSPAAGTVTAAVGT 247
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 220-363 6.58e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 38.74  E-value: 6.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 220 APPKTAAGAPKrlSSAVAPRRAPPASAAPTRR-----APSPKAPV--VAPTRRAPSP-------KAP--VAPVAPV---- 279
Cdd:pfam05109 440 AAPNTTTGLPS--STHVPTNLTAPASTGPTVStadvtSPTPAGTTsgASPVTPSPSPrdngtesKAPdmTSPTSAVttpt 517

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 280 ----KPKPFVARPAPNfGKPRAAVAPARAPQITQRAPAATRPATSAIRVIPIApnVVRNGAPAAPRKPIEIARPQTSSGI 355
Cdd:pfam05109 518 pnatSPTPAVTTPTPN-ATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNA--TIPTLGKTSPTSAVTTPTPNATSPT 594


                  ....*...
gi 1831519346 356 AAPGAPRS 363
Cdd:pfam05109 595 VGETSPQA 602
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 203-345 8.17e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 38.31  E-value: 8.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 203 EM--LR-LAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPkAPVVAPTRRAPSPKAPV------ 273
Cdd:PRK07994  350 EMtlLRmLAFHPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS-APQQAPAVPLPETTSQLlaarqq 428

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 274 -----APVAPVKPKPFVA---RPAPNFGKPRAAVAPARAPQitqrAPAATRPATSAIRVIPIAPNVVRNGA-PAAPRKPI 344
Cdd:PRK07994  429 lqraqGATKAKKSEPAAAsraRPVNSALERLASVRPAPSAL----EKAPAKKEAYRWKATNPVEVKKEPVAtPKALKKAL 504


                  .
gi 1831519346 345 E 345
Cdd:PRK07994  505 E 505
PHA03378 PHA03378
EBNA-3B; Provisional
 216-360 9.87e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 38.12  E-value: 9.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831519346 216 SSTSAPPKTAAGAPkrlsSAVAPRRAP----PASAAPTRRAPSPKAPVVAPTRRAPsPKAPVAPVAP--VKPKPFVARPA 289
Cdd:PHA03378  603 SQTPEPPTTQSHIP----ETSAPRQWPmplrPIPMRPLRMQPITFNVLVFPTPHQP-PQVEITPYKPtwTQIGHIPYQPS 677

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831519346 290 P-NFGKPRAAVAPARAPQITQRAPAATR-PATSAIRVIPIAPNVVRNGAPAAPrkPIEIARPQTSSGIAAPGA 360
Cdd:PHA03378  678 PtGANTMLPIQWAPGTMQPPPRAPTPMRpPAAPPGRAQRPAAATGRARPPAAA--PGRARPPAAAPGRARPPA 748
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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