|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
200-435 |
4.38e-36 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 136.32 E-value: 4.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 200 RQRIDNNVEQQREYSEMMAALQNKVHEYRKHIAELEGRMVGarnrmlddptsnvmifDNYDPGNTYITNHNVELWSPARG 279
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLE----------------KTSELEKTELLLRKLTLEPRLQR 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 280 KREtilggggapglttvnvhagagysgsgvagygggvqamvgDPNANYE-MIARLDEERRRSDE-------YRMQWENER 351
Cdd:pfam15035 65 LER---------------------------------------EHSADLEeALIRLEEERQRSESlsqvnslLREQLEQAS 105
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 352 QKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQKAE 431
Cdd:pfam15035 106 RANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWREVVAVRRQFTELKTATERDLSELKTE 185
|
....
gi 1845979720 432 FTRA 435
Cdd:pfam15035 186 FSRT 189
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
672-1600 |
4.84e-34 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 144.04 E-value: 4.84e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 672 EAERNSRRTDDKLR-----ASEAER------VAAEKARKFLE--DELAKLQASfqkSSTDDARKLRDEMDEhTNSIQEEF 738
Cdd:TIGR02168 176 ETERKLERTRENLDrlediLNELERqlksleRQAEKAERYKElkAELRELELA---LLVLRLEELREELEE-LQEELKEA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 739 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYsddirrnIQKDLDDLREKYDRVHTD 818
Cdd:TIGR02168 252 EEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQI-------LRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 819 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD 898
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 899 YESQINLLRRHNDELDTTIKGHQGKIThlENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLEN 978
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 979 ELEKLRNENKELVGKEARARDaaNQQLSRANLLNKE-LEDTKQDLKHSTDVNKQLEQDIR-DLKERLANIgkggrISRDS 1056
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEG--FSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIEaALGGRLQAV-----VVENL 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1057 TTGTDGGAFgdrssvadpsRTRGAAGSTVFVPAaediESRGGGEIDiPSSGDVIHGRDGRDGRDAgnrgthTITNTKERI 1136
Cdd:TIGR02168 556 NAAKKAIAF----------LKQNELGRVTFLPL----DSIKGTEIQ-GNDREILKNIEGFLGVAK------DLVKFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1137 ERIEKNILDRYhddeLVEHKIREVNDRWKRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---K 1209
Cdd:TIGR02168 615 RKALSYLLGGV----LVVDDLDNALELAKKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieE 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1210 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1289
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKA-LAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1290 GQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1369
Cdd:TIGR02168 761 AEIEELEER----LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1370 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1449
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1450 LKELKNSLSHAKTEKERLQNafrektkqadhlnqlasQFDTKLTKLRNELQDTNDklitsdternalrnELQKLSQELKF 1529
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEV-----------------RIDNLQERLSEEYSLTLE--------------EAEALENKIED 965
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1530 GNEQIQRKSDEYQTTIDDLAhshRVSedsrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1600
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELG---PVN----LAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1244-2142 |
8.29e-29 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 127.09 E-value: 8.29e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1244 ENLKSVED---DLRDKLNNLEKQlADSLNRENELEREKRDYDekINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytV 1320
Cdd:TIGR02168 186 ENLDRLEDilnELERQLKSLERQ-AEKAERYKELKAELRELE--LALLVLRLEELREELEELQEELKEAEEELEE----L 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1321 RSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR------- 1393
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKldelaee 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1394 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQnafRE 1473
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE---DR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1474 KTKQADHLNQLASQFDtkltklRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHShr 1553
Cdd:TIGR02168 416 RERLQQEIEELLKKLE------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL-- 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1554 vseDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQ---DYIKADSE---------RDILSDALRRFQSSANRVINF 1621
Cdd:TIGR02168 488 ---QARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGvlsELISVDEGyeaaieaalGGRLQAVVVENLNAAKKAIAF 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1622 HTFVDGGAGYV---DGVPGGTSVIGGGPSAQRS-GAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSD-VAYPRS 1696
Cdd:TIGR02168 565 LKQNELGRVTFlplDSIKGTEIQGNDREILKNIeGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELaKKLRPG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1697 VPFPpSADFSSGRPGAASAGGRvinnlDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETH 1776
Cdd:TIGR02168 645 YRIV-TLDGDLVRPGGVITGGS-----AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1777 TTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQL 1856
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1857 KNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDM 1936
Cdd:TIGR02168 799 KALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1937 KDDTDKLRRDLTKAESVENELRKTIDiqsKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRdykqrvhdv 2016
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELR---ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS--------- 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2017 nnrvSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNssql 2096
Cdd:TIGR02168 947 ----EEYSLTLEEAEALENKIEDDEEEARRRL-------KRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKED---- 1011
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1845979720 2097 sdgwkkekitLLKKIELLENEKRRTDAAIRETALQR-EAIEKSLNAM 2142
Cdd:TIGR02168 1012 ----------LTEAKETLEEAIEEIDREARERFKDTfDQVNENFQRV 1048
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1181-2121 |
2.76e-25 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 115.55 E-value: 2.76e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1181 RIRELEDELSQIGRG----NDKTENDITELKRKHAAEIDKLKSDIS--ALHDKHLSDLDDEKEQYGKAVENLKSVEDDLR 1254
Cdd:TIGR02169 118 RLSEIHDFLAAAGIYpegyNVVLQGDVTDFISMSPVERRKIIDEIAgvAEFDRKKEKALEELEEVEENIERLDLIIDEKR 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1255 DKLNNLEKQLADSLnRENELEREKRDYDEKINSlygqnqkikdewddfrndadKEIQKWKTDAYTVRSEAKALETTNTAL 1334
Cdd:TIGR02169 198 QQLERLRREREKAE-RYQALLKEKREYEGYELL--------------------KEKEALERQKEAIERQLASLEEELEKL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1335 KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--------QVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1406
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlrvkeKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1407 DANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAS 1486
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1487 QFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsedsrlnalQEL 1566
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL----EQLAADLSKYE---------------------QEL 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1567 EARKYEINDLtsrldstEQRLATLQQDYIKADSERDILSDALRRFqSSANRVINfhtfvdggagyvDGVPG--GTSVIGG 1644
Cdd:TIGR02169 472 YDLKEEYDRV-------EKELSKLQRELAEAEAQARASEERVRGG-RAVEEVLK------------ASIQGvhGTVAQLG 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1645 GPSAQRSGAYDPSSGGVIG----SGISGGPGGSDFGREIEIGRGD--------SDQSDVAYPRS----------VPFPPS 1702
Cdd:TIGR02169 532 SVGERYATAIEVAAGNRLNnvvvEDDAVAKEAIELLKRRKAGRATflplnkmrDERRDLSILSEdgvigfavdlVEFDPK 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1703 ---------------ADFSSGRPgaaSAGGRVINNLDG---TTTVNMNGGFDI--------ANLEGTLQSLLNKIEKLEM 1756
Cdd:TIGR02169 612 yepafkyvfgdtlvvEDIEAARR---LMGKYRMVTLEGelfEKSGAMTGGSRAprggilfsRSEPAELQRLRERLEGLKR 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1757 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdEERRQMKSKmV 1836
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEI----ENVKSELKE-L 763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1837 AAELQArgKEAQLRHLNEQLKNLRTDLdnAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILT 1916
Cdd:TIGR02169 764 EARIEE--LEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQ 839
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1917 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLE 1996
Cdd:TIGR02169 840 EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES----------RLGDLKKERDELEAQLRELERKIEELE 909
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1997 NELLNVRSEVRDYKQRVHDVNNRVSELQrqlqDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQqLETAKNEkrvATKEL 2076
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIE----DPKGEDEEIPEEELSLEDVQAELQRVEEEIRA-LEPVNML---AIQEY 981
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*
gi 1845979720 2077 EDLKRRLAQLENERrnssqlsDGWKKEKITLLKKIELLENEKRRT 2121
Cdd:TIGR02169 982 EEVLKRLDELKEKR-------AKLEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
653-1433 |
3.59e-24 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 111.70 E-value: 3.59e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 653 DKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKLRDEMDEHTN 732
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQA-LLKEKREYEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 733 SIQEE---FKTRIDELNRRVENLLRENNRLKSEVNPLKdkyrdlENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLR 809
Cdd:TIGR02169 248 SLEEElekLTEEISELEKRLEEIEQLLEELNKKIKDLG------EEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 810 EKYDRVHTDNEKILGELEHAQKAahLAEQQLKEIKIQrDDYQKQKDEharhlfdiRHKLETEIkgrQDLEKNGARNNDEL 889
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELERE--IEEERKRRDKLT-EEYAELKEE--------LEDLRAEL---EEVDKEFAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 890 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKE-------KQDILNQKLKL 962
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEikkqewkLEQLAADLSKY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 963 DGDVQALKETIRKLENELEKLRnenKELVGKEARARDAANQQLSRA---NLLNKELEDT--------KQDLKHSTDV--- 1028
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQ---RELAEAEAQARASEERVRGGRaveEVLKASIQGVhgtvaqlgSVGERYATAIeva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1029 ------NKQLEQD------IRDLKERlanigKGGRIS-----------RDSTTGTDGGAFGDRSSVADPSRTRGAA---- 1081
Cdd:TIGR02169 545 agnrlnNVVVEDDavakeaIELLKRR-----KAGRATflplnkmrderRDLSILSEDGVIGFAVDLVEFDPKYEPAfkyv 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1082 -GSTVFVpaaEDIES--RGGGEI-------DIPSSGDVIHGrdgrdGRDAGNRGTHTITNTKERIERieknildryhdde 1151
Cdd:TIGR02169 620 fGDTLVV---EDIEAarRLMGKYrmvtlegELFEKSGAMTG-----GSRAPRGGILFSRSEPAELQR------------- 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1152 lVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAA---EIDKLKSDISALHDKh 1228
Cdd:TIGR02169 679 -LRERLEGL----KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKlkeRLEELEEDLSSLEQE- 752
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1229 LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSlnRENELEREKRDYDEKINslygqnqkikdEWDDFRNDADK 1308
Cdd:TIGR02169 753 IENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVS-----------RIEARLREIEQ 819
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1309 EIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1388
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR 899
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1845979720 1389 STQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1433
Cdd:TIGR02169 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1165-2049 |
6.18e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 110.92 E-value: 6.18e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1165 KRELE-RLENEKDDLERrireLEDELSQIGRGNDKTEnditeLKRKHAAEIDKLKSDISALHdkhLSDLDDEKEQYGKAV 1243
Cdd:TIGR02168 174 RKETErKLERTRENLDR----LEDILNELERQLKSLE-----RQAEKAERYKELKAELRELE---LALLVLRLEELREEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1244 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINS----LYGQNQKIKD------EWDDFRNDADKEIQKW 1313
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEElqkeLYALANEISRleqqkqILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1314 KTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNR 1393
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1394 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMEtdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1473
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDA 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1474 KTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNeqiqrksdEYQTTID-DLAhsh 1552
Cdd:TIGR02168 480 AERE---LAQLQARLDS-LERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDE--------GYEAAIEaALG--- 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1553 rvsedSRLNAL--QELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFVDGGag 1630
Cdd:TIGR02168 545 -----GRLQAVvvENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA-- 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1631 yVDGVPGGTSVIGGGPSAQR-SGAYDPSsggvigsgisggpggsdfgreieiGRGDSDQSDVAYPRSVPFPPSADFSSGR 1709
Cdd:TIGR02168 618 -LSYLLGGVLVVDDLDNALElAKKLRPG------------------------YRIVTLDGDLVRPGGVITGGSAKTNSSI 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1710 PGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNI 1789
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL 752
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1790 EDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD 1869
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERR 832
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1870 I----RSLRDKEEQWD----------SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1935
Cdd:TIGR02168 833 IaateRRLEDLEEQIEelsedieslaAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1936 MKDDTDKLRRDLTKAESVENELRKTID-IQSKTSHEYQLLKDQLLNTQN----ELNGANNRKQQLENEL-------LNVR 2003
Cdd:TIGR02168 913 LRRELEELREKLAQLELRLEGLEVRIDnLQERLSEEYSLTLEEAEALENkiedDEEEARRRLKRLENKIkelgpvnLAAI 992
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2004 SEVRDYKQRVHDVNNRVSELQR---QLQDANTEKNR-VEDRFLSVEKVVN 2049
Cdd:TIGR02168 993 EEYEELKERYDFLTAQKEDLTEakeTLEEAIEEIDReARERFKDTFDQVN 1042
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
531-1528 |
7.38e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 110.53 E-value: 7.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 531 ERNIELESRGDDSQRKIAELE---AELRRNREKLNEAQGALKKLHEMaQDSEKNVDGTVSIKRTRSLSpgktplppsEAL 607
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRLEdilNELERQLKSLERQAEKAERYKEL-KAELRELELALLVLRLEELR---------EEL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 608 RAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAS 687
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 688 EAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEhTNSIQEEFKTRIDELNRRVENllrennrlksevnpLK 767
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELES-LEAELEE-LEAELEELESRLEELEEQLET--------------LR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 768 DKYRDLENEYNSTQRRIEEKETQirysddirrniqkdLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQR 847
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEAR--------------LERLEDRRERLQQEIEELLKKLEEAELKEL--QAELEELEEEL 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 848 DDYQKQKDEHARHLFDIRhkleteikgrqdlekngarnnDELDKLRQtisdyesqinllrrhndeldttikghqgKITHL 927
Cdd:TIGR02168 450 EELQEELERLEEALEELR---------------------EELEEAEQ----------------------------ALDAA 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 928 ENELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDGDVQALKETIrKLENELEKlrnenkelvGKEARARDAANqq 1004
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVkalLKNQSGLSGILGVLSELI-SVDEGYEA---------AIEAALGGRLQ-- 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1005 lsraNLLNKELEDTKQDLKHstdvnkqleqdirdLKErlANIGKGGRISRDSTTGTDggafgdrssvADPSRTRGAAGST 1084
Cdd:TIGR02168 549 ----AVVVENLNAAKKAIAF--------------LKQ--NELGRVTFLPLDSIKGTE----------IQGNDREILKNIE 598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1085 VFVPAAEDIESrgggeidipssgdvihgrdgrdgrdagnrgthtitnTKERIERIEKNILDRYhddeLVEHKIREVNDRW 1164
Cdd:TIGR02168 599 GFLGVAKDLVK------------------------------------FDPKLRKALSYLLGGV----LVVDDLDNALELA 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1165 KRELERLenekddlerRIRELEDEL----SQIGRGNDKTENDITELKR---KHAAEIDKLKSDISALHDKhLSDLDDEKE 1237
Cdd:TIGR02168 639 KKLRPGY---------RIVTLDGDLvrpgGVITGGSAKTNSSILERRReieELEEKIEELEEKIAELEKA-LAELRKELE 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1238 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDA 1317
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEER----LEEAEEELAEAEAEI 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1318 YTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSL 1397
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1398 EDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNafrektkq 1477
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV-------- 936
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1478 adhlnqlasQFDTKLTKLRNELQDTNDKLITS----DTERNALRNELQKLSQELK 1528
Cdd:TIGR02168 937 ---------RIDNLQERLSEEYSLTLEEAEALenkiEDDEEEARRRLKRLENKIK 982
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
721-1543 |
2.03e-22 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 105.92 E-value: 2.03e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 721 RKLRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRlKSEVNPLKDKYRDLE-----NEYNSTQRRIEEKETQI---- 791
Cdd:TIGR02169 173 EKALEELEEVEENI-ERLDLIIDEKRQQLERLRREREK-AERYQALLKEKREYEgyellKEKEALERQKEAIERQLasle 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 792 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKI--LGELEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDEHARHLFDI 864
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEELNKKIkdLGEEEQLRVKEKIGELEAEIASLERsiaekERELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 865 RHKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDL 944
Cdd:TIGR02169 331 IDKLLAEI---EELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 945 NQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRAnllNKELEDTKQDLKH 1024
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLA----ADLSKY---EQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1025 STDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTR-----------GAAGSTVFVP----A 1089
Cdd:TIGR02169 481 VEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGeryataievaaGNRLNNVVVEddavA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1090 AEDIE----SRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKER---------------IERIE--KNILDRYH 1148
Cdd:TIGR02169 561 KEAIEllkrRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPkyepafkyvfgdtlvVEDIEaaRRLMGKYR 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1149 ----DDELVE---------HKIREVNDRWKRELERLEnekdDLERRIRELEDELSQIGRGNDKTENDITELKRKhaaeID 1215
Cdd:TIGR02169 641 mvtlEGELFEksgamtggsRAPRGGILFSRSEPAELQ----RLRERLEGLKRELSSLQSELRRIENRLDELSQE----LS 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1216 KLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYgqnqki 1295
Cdd:TIGR02169 713 DASRKIGEI-EKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLE------ 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1296 kdewddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD 1375
Cdd:TIGR02169 786 -------ARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1376 TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDankwRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDALKELKN 1455
Cdd:TIGR02169 859 LNGKKEELEEELEELEAALRDLESRLGDLKKE----RDELEAQLRE---LERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1456 SLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRnELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQ 1535
Cdd:TIGR02169 932 ELSEIEDPKGEDE----EIPEEELSLEDVQAELQRVEEEIR-ALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
....*...
gi 1845979720 1536 RKSDEYQT 1543
Cdd:TIGR02169 1007 ERIEEYEK 1014
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
615-1405 |
2.22e-20 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 99.37 E-value: 2.22e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 615 RNKDNDIQQLERKLKiaESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRAseaervAA 694
Cdd:TIGR02169 207 REKAERYQALLKEKR--EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEE------LN 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 695 EKARKFLEDELAKLQA-----SFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 769
Cdd:TIGR02169 279 KKIKDLGEEEQLRVKEkigelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 770 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 849
Cdd:TIGR02169 359 YAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 850 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN 929
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKA 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 930 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLK---LDGDVQAlKETIRKLENE---------LEKLRNENKEL-VGKEAR 996
Cdd:TIGR02169 519 SIQGVHGTVAQLGSVGERYATAIEVAAGNRLNnvvVEDDAVA-KEAIELLKRRkagratflpLNKMRDERRDLsILSEDG 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 997 ARD-------------AANQQLSRANLLNKELEDTKQDLKHSTDVNkqLEQDIRDlkerlanigKGGRISrdsttgtdGG 1063
Cdd:TIGR02169 598 VIGfavdlvefdpkyePAFKYVFGDTLVVEDIEAARRLMGKYRMVT--LEGELFE---------KSGAMT--------GG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1064 AFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRGGGEIDIPSSGDVIHGR--DGRDGRDAGNRGTHTITNTKERIERIEK 1141
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRL-----RERLEGLKRELSSLQSELRRIENRldELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1142 NILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTE-NDITELKRKHAAEIDKLKSD 1220
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1221 ISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1300
Cdd:TIGR02169 814 LREI-EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1301 DFRND---ADKEIQKWKTDAYTVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKV------RDLTSQVRHLED 1371
Cdd:TIGR02169 893 ELEAQlreLERKIEELEAQIEKKRKRLS-------ELKAKLEALEEELSEIEDPKGEDEEIPeeelslEDVQAELQRVEE 965
|
810 820 830
....*....|....*....|....*....|....
gi 1845979720 1372 ELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ 1405
Cdd:TIGR02169 966 EIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLE 999
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
615-1042 |
1.03e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 1.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 615 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAA 694
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 695 EKARKFLEDELAKLQAsfQKSSTDDAR-KLRDEMDEHTNSIQEEfKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 773
Cdd:TIGR02168 746 EERIAQLSKELTELEA--EIEELEERLeEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 774 ENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLddlrekydrvhtdnEKILGELEHAQkaahlaeQQLKEIKIQRDDYQKQ 853
Cdd:TIGR02168 823 RERLESLERRIAATERRLEDLEEQIEELSEDI--------------ESLAAEIEELE-------ELIEELESELEALLNE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 854 KDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhndeldttikghQGKITHLenelhs 933
Cdd:TIGR02168 882 RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL--------------EVRIDNL------ 941
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 934 rsgeIEKLNDLNQRLQkekQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKElvgkearARDAANQQLSRANLLNK 1013
Cdd:TIGR02168 942 ----QERLSEEYSLTL---EEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLA-------AIEEYEELKERYDFLTA 1007
|
410 420
....*....|....*....|....*....
gi 1845979720 1014 ELEDTKQDLkhstdvnKQLEQDIRDLKER 1042
Cdd:TIGR02168 1008 QKEDLTEAK-------ETLEEAIEEIDRE 1029
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
517-993 |
3.23e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 91.62 E-value: 3.23e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 517 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtrslsp 596
Cdd:TIGR04523 211 QKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQN----------- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 597 gktplppsealravRNTFRNKDNDIQQLERKLKIAESQVKEFLNK-----FENADEARRRLDKQFA-------DAKREIS 664
Cdd:TIGR04523 280 --------------NKKIKELEKQLNQLKSEISDLNNQKEQDWNKelkseLKNQEKKLEEIQNQISqnnkiisQLNEQIS 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 665 NLQKSVD--EAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFktri 742
Cdd:TIGR04523 346 QLKKELTnsESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK---- 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 743 DELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 822
Cdd:TIGR04523 422 ELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 823 LGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgrqDLEKNGARNNDELDKLRQTISDYESQ 902
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD-----DFELKKENLEKEIDEKNKEIEELKQT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 903 INLLRRHNDELDTTIKGHQGKITHLENELHSR-------SGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRK 975
Cdd:TIGR04523 577 QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKekkisslEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
490
....*....|....*...
gi 1845979720 976 LENELEKLRNENKELVGK 993
Cdd:TIGR04523 657 IRNKWPEIIKKIKESKTK 674
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
607-1383 |
6.97e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 90.46 E-value: 6.97e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 607 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS-------VDEAERNSRR 679
Cdd:TIGR04523 42 LKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDlskinseIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 680 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST--DDARKLRDEMDEHTNSIQEEF---KTRIDELN---RRVEN 751
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNkyNDLKKQKEELENELNLLEKEKlniQKNIDKIKnklLKLEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 752 LL-------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILG 824
Cdd:TIGR04523 202 LLsnlkkkiQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIS-------NTQTQLNQLKDEQNKIKKQLSEKQK 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 825 ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQ----DLEKNGARNNDELDKLRQTISDYE 900
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKEQ------DWNKELKSELKNQEkkleEIQNQISQNNKIISQLNEQISQLK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL----NDLNQRLQKEKQD----------ILNQKLKLDGDV 966
Cdd:TIGR04523 349 KELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLesqiNDLESKIQNQEKLnqqkdeqikkLQQEKELLEKEI 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 967 QALKETIRKLENELEKLRNEN--KELVGKE-ARARDAANQQLS----RANLLNKELEDTKQDLKHSTDVNKQLEQDIRDL 1039
Cdd:TIGR04523 429 ERLKETIIKNNSEIKDLTNQDsvKELIIKNlDNTRESLETQLKvlsrSINKIKQNLEQKQKELKSKEKELKKLNEEKKEL 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1040 KERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgr 1119
Cdd:TIGR04523 509 EEKVKDL------------------------------------------------------------------------- 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1120 dagnrgthtitntKERIERIEKNIldryhddelvehkirevndrwkrelERLENEKDDLERRIRELEDELSQIGRGNDKt 1199
Cdd:TIGR04523 516 -------------TKKISSLKEKI-------------------------EKLESEKKEKESKISDLEDELNKDDFELKK- 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1200 eNDITELKRKHAAEIDKLKSDISALHDKHlSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKR 1279
Cdd:TIGR04523 557 -ENLEKEIDEKNKEIEELKQTQKSLKKKQ-EEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIK 634
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1280 DYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVrseAKALETTNTALKAQLQAANDRIDHLTKT-----VND 1354
Cdd:TIGR04523 635 NIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKI---DDIIELMKDWLKELSLHYKKYITRMIRIkdlpkLEE 711
|
810 820
....*....|....*....|....*....
gi 1845979720 1355 HTSKVRDLTSQVRHLEDELADTKGNLVQK 1383
Cdd:TIGR04523 712 KYKEIEKELKKLDEFSKELENIIKNFNKK 740
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
746-1509 |
7.99e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 90.46 E-value: 7.99e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 746 NRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE 825
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 826 LEHAQKAAHLAEQQLKEIKiqrddyqKQKDEHARHLFDIRhkleTEIKgrqDLEKNGARNNDELDKLRQTISDYESQINL 905
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLE-------KQKKENKKNIDKFL----TEIK---KKEKELEKLNNKYNDLKKQKEELENELNL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 906 LRRHNDELDTTIKghqgKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRN 985
Cdd:TIGR04523 178 LEKEKLNIQKNID----KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 986 ENKELVGKEARARD---AANQQLSRANLLNKELEDTKQDLKHS-TDVNKQLEQDI-RDLKERLANIGKggrisrdsttgt 1060
Cdd:TIGR04523 254 QLNQLKDEQNKIKKqlsEKQKELEQNNKKIKELEKQLNQLKSEiSDLNNQKEQDWnKELKSELKNQEK------------ 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1061 dggafgdrssvadpsrtrgaagstvfvpAAEDIESRgggeidipssgdvihgrdgrdgrdagnrgthtITNTKERIERIE 1140
Cdd:TIGR04523 322 ----------------------------KLEEIQNQ--------------------------------ISQNNKIISQLN 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1141 KNILDryhddelvehkirevndrWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKrkhaAEIDKLKSD 1220
Cdd:TIGR04523 342 EQISQ------------------LKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE----SQINDLESK 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1221 I------SALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK 1294
Cdd:TIGR04523 400 IqnqeklNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINK 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1295 IKDEWDDFRNDADKEIQKWKTdaytvrseakalettntaLKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1374
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKK------------------LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1375 DTKGNLVQKEMDLESTQnrlrsLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK 1454
Cdd:TIGR04523 542 DLEDELNKDDFELKKEN-----LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLE 616
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1455 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1509
Cdd:TIGR04523 617 KELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKES 671
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
798-1612 |
4.89e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 4.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 798 RRNIQKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRD---DYQKQKDEharhLFDIRHKLETeikg 874
Cdd:TIGR02168 174 RKETERKLERTRENLDRL----EDILNELE----------RQLKSLERQAEkaeRYKELKAE----LRELELALLV---- 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 875 rQDLEkngaRNNDELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 954
Cdd:TIGR02168 232 -LRLE----ELREELEELQEELKEAEEELE-------ELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 955 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 1034
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1035 DIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVfvpaaEDIESRgggeidipssgdvihgRD 1114
Cdd:TIGR02168 380 QLETLRSKVAQL---------------------ELQIASLNNEIERLEARL-----ERLEDR----------------RE 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1115 GRDGRDAGNRGTHTITNTKERIERIEknildryhDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1194
Cdd:TIGR02168 418 RLQQEIEELLKKLEEAELKELQAELE--------ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1195 GNDKTENDITELKRKH--AAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-LKSVEDDLRDKLNNLEKQLADSLnRE 1271
Cdd:TIGR02168 490 RLDSLERLQENLEGFSegVKALLKNQSGLSGILGV-LSELISVDEGYEAAIEAaLGGRLQAVVVENLNAAKKAIAFL-KQ 567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1272 NELER-----EKRDYDEKINSLYGQNQK-------IKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALE--------TTN 1331
Cdd:TIGR02168 568 NELGRvtflpLDSIKGTEIQGNDREILKniegflgVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALElakklrpgYRI 647
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1332 TALKAQL-----------QAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ 1400
Cdd:TIGR02168 648 VTLDGDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQ 727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1401 HSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKElknslshAKTEKERLQnafrektKQADH 1480
Cdd:TIGR02168 728 ISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-------AEAEIEELE-------AQIEQ 793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1481 LNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEyqttIDDLAHSHRVSEDSRL 1560
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED----IESLAAEIEELEELIE 869
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1561 NALQELEArkyeindLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ 1612
Cdd:TIGR02168 870 ELESELEA-------LLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1129-1619 |
5.23e-17 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 87.77 E-value: 5.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNILDryhddelVEHKIREVNDRWKR---ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1205
Cdd:TIGR04523 119 KNKLEVELNKLEKQKKE-------NKKNIDKFLTEIKKkekELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1206 LKRKHAAEIDKLkSDISALHDKH------LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLadsLNRENELEREKR 1279
Cdd:TIGR04523 192 IKNKLLKLELLL-SNLKKKIQKNkslesqISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQL---NQLKDEQNKIKK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1280 DYDEKINSLYGQNQKIKD---------------------EWDDFRNDADKEIQKWKTDAYT------------------V 1320
Cdd:TIGR04523 268 QLSEKQKELEQNNKKIKElekqlnqlkseisdlnnqkeqDWNKELKSELKNQEKKLEEIQNqisqnnkiisqlneqisqL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1321 RSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ 1400
Cdd:TIGR04523 348 KKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1401 HSTLQSDANKWRGELDAalrendiLKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADH 1480
Cdd:TIGR04523 428 IERLKETIIKNNSEIKD-------LTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKK 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1481 LNQLASQFDTK---LTKLRNELQDTNDKLITSDTERNA----LRNELQKLSQELKFgnEQIQRKSDEYQTTIDDLAHSHR 1553
Cdd:TIGR04523 501 LNEEKKELEEKvkdLTKKISSLKEKIEKLESEKKEKESkisdLEDELNKDDFELKK--ENLEKEIDEKNKEIEELKQTQK 578
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 1554 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1619
Cdd:TIGR04523 579 SLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLK 644
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
521-1283 |
1.31e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 1.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 521 ELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNvdgtvsIKRTRslspgktp 600
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQ------KQILR-------- 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 601 lppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRT 680
Cdd:TIGR02168 309 ----ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 681 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTdDARKLRDEMDEHTnsiQEEFKTRIDELNRRVENLLRENNRLK 760
Cdd:TIGR02168 385 RSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQ-EIEELLKKLEEAE---LKELQAELEELEEELEELQEELERLE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 761 SEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKY--------------DRVHTDN------E 820
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLknqsglsgilgvlsELISVDEgyeaaiE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 821 KILGELEHA-----QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQT 895
Cdd:TIGR02168 541 AALGGRLQAvvvenLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 896 I-------SDYESQINLLRRHN-----------------------DELDTTIKGHQGKITHLENELHSRSGEIEKLNDLN 945
Cdd:TIGR02168 621 LlggvlvvDDLDNALELAKKLRpgyrivtldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKAL 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 946 QRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHS 1025
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1026 TDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTvfvpaAEDIESRgggeidips 1105
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR-----LEDLEEQ--------- 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1106 sgdvihgrdgrdgrdagnrgthtITNTKERIERIEKNILDryhddelvehkIREVNDRWKRELERLENEKDDLERRIREL 1185
Cdd:TIGR02168 847 -----------------------IEELSEDIESLAAEIEE-----------LEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1186 EDELSQIGRGNDKTENDITELKRKHAA----------EIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD 1255
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEElreklaqlelRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
810 820 830
....*....|....*....|....*....|..
gi 1845979720 1256 KLNNLEKQLAD----SLNRENELEREKRDYDE 1283
Cdd:TIGR02168 973 RLKRLENKIKElgpvNLAAIEEYEELKERYDF 1004
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1167-1610 |
1.44e-16 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 86.23 E-value: 1.44e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHdkhlSDLDDEKEQYGKAVENL 1246
Cdd:TIGR04523 55 ELKNLDKNLNKDEEKINNSNNKIKIL----EQQIKDLNDKLKKNKDKINKLNSDLSKIN----SEIKNDKEQKNKLEVEL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1247 KSVEDDLRDK----------LNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWkTD 1316
Cdd:TIGR04523 127 NKLEKQKKENkknidkflteIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLL-SN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1317 AYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS 1396
Cdd:TIGR04523 206 LKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1397 LEDQHSTLQSDANKWRGELDAALreNDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK 1476
Cdd:TIGR04523 286 LEKQLNQLKSEISDLNNQKEQDW--NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1477 QADHLNQlasqfdtKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQT---TIDDLAHSHR 1553
Cdd:TIGR04523 364 ELEEKQN-------EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELlekEIERLKETII 436
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1554 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRR 1610
Cdd:TIGR04523 437 KNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
328-1047 |
1.49e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.65 E-value: 1.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 328 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKDKE--KTFINRERN--------LAQYLSDEQ 397
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEqqKQILRERLAnlerqleeLEAQLEELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 398 RKMLDLWTELQRVRKQFSDLKTHTEEdLDKQKAEFTRAIRNVNNISR--NAAFSAGAGDglgLYGLEDGGDVNRTTNNYE 475
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELES-LEAELEELEAELEELESRLEelEEQLETLRSK---VAQLELQIASLNNEIERL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 476 KVFIETIKRMNGTGGAGSASSADLLEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRgddsqrkIAELEAELR 555
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE-------LEEAEQALD 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 556 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPpsealravrntfrnkdndiqqlerklkiaeSQV 635
Cdd:TIGR02168 479 AAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVL------------------------------SEL 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 636 KEFLNKFENADEA--RRRLD----KQFADAKREISNLQKSvdEAERN-----SRRTDDKLRASEAERVAAEKARKFLEDE 704
Cdd:TIGR02168 529 ISVDEGYEAAIEAalGGRLQavvvENLNAAKKAIAFLKQN--ELGRVtflplDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 705 LAKLQASFQK----------------SSTDDARKLRDEM-------------------DEHTNSIQEEFKTRIDELNRRV 749
Cdd:TIGR02168 607 LVKFDPKLRKalsyllggvlvvddldNALELAKKLRPGYrivtldgdlvrpggvitggSAKTNSSILERRREIEELEEKI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 750 ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHA 829
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 830 QKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgrqDLEKNGARNNDELDKLRQTISDYESQINLLRRH 909
Cdd:TIGR02168 767 EERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD-------ELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 910 NDELDTTIKGHQGKITHLEnelhsrsGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 989
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLA-------AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSE 912
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 990 LVGKEARARDAANQ--------QLSRANLLNK-------ELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 1047
Cdd:TIGR02168 913 LRRELEELREKLAQlelrleglEVRIDNLQERlseeyslTLEEAEALENKIEDDEEEARRRLKRLENKIKELG 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1736-2226 |
1.72e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.53 E-value: 1.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1815
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1816 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRtdldnahtdiRSLRDKEEQWDSSRFQLETKMRESD 1895
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE----------AELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1896 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLK 1975
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--VSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRT 2053
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2054 TETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssqlsdgwkkekITLLKKIELLENEKRrtDAAIRETALQRE 2133
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR-------------GAIGAAVDLVASDLR--EADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2134 AIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2213
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490
....*....|...
gi 1845979720 2214 LEDQIAILRDQLD 2226
Cdd:COG1196 702 EEEEERELAEAEE 714
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
694-1280 |
1.88e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.14 E-value: 1.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 694 AEKARKF--LEDELAKLQASfqksstddARKLRDEmdeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYR 771
Cdd:COG1196 209 AEKAERYreLKEELKELEAE--------LLLLKLR---ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 772 DLENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQ 851
Cdd:COG1196 278 ELELELEEAQAEEYELLAELA-------RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 852 KQKDEHARHLFDIRHKLETEIKGRQDLEkngarnnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL 931
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAE-------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 932 HSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLL 1011
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1012 NKELEDTKQDLKHS-----------------------------------TDVNKQLEQDIRDLKER---------LANIG 1047
Cdd:COG1196 504 EGFLEGVKAALLLAglrglagavavligveaayeaaleaalaaalqnivVEDDEVAAAAIEYLKAAkagratflpLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1048 KGGRISRDSTTGTDGGAFGDRSS--VADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRG 1125
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASdlREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1126 THTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEN---D 1202
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEellE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1203 ITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGK----AVENLKSVE---DDLRDKLNNLEKQLADSLNRENELE 1275
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEEL-ERELERLEREIEALGPvnllAIEEYEELEeryDFLSEQREDLEEARETLEEAIEEID 822
|
....*
gi 1845979720 1276 REKRD 1280
Cdd:COG1196 823 RETRE 827
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
516-1048 |
1.57e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.45 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 516 AELHKELMTKYEESIERNIELESRGDD---SQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsikrtr 592
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL------- 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 593 slspgktplppSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 672
Cdd:COG1196 336 -----------EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 673 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEmdEHTNSIQEEFKTRIDELNRRVENL 752
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE--EALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 753 LRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEketqirysdDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQ-- 830
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKAALLL---------AGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvv 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 831 ---KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR----QDLEKNGARNNDELDKLRQTISDY---E 900
Cdd:COG1196 554 eddEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVdlvaSDLREADARYYVLGDTLLGRTLVAarlE 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 980
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 981 EKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1048
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
737-1371 |
1.70e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.06 E-value: 1.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 737 EFKTRIDElnRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVH 816
Cdd:COG1196 217 ELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 817 TDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 896
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 897 SDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklndlnqRLQKEKQDILNQKLKLDGDVQALKETIRKL 976
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE-------RLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 977 ENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGrisrDS 1056
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG----LA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1057 TTGTDGGAFGDRSSVADPSRTrGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERI 1136
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAAL-AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVD 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1137 ERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndktenDITELKRKHAAEIDK 1216
Cdd:COG1196 603 LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGG-------SLTGGSRRELLAALL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1217 LKSDIsalhdkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK 1296
Cdd:COG1196 676 EAEAE-------LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1297 DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLtktvndhTSKVRDLTSQVRHLED 1371
Cdd:COG1196 749 EEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELEERYDFL-------SEQREDLEEARETLEE 816
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
546-1048 |
1.83e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 82.76 E-value: 1.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 546 KIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTvsIKRTRSLSPGKTPLPPS-----EALRAVRNTFRNKD-- 618
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDL--KKQKEELENELNLLEKEklniqKNIDKIKNKLLKLEll 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 -NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKA 697
Cdd:TIGR04523 203 lSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKK 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 698 RKFLEDELAKLQASFQKsstddarkLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN----RLKSEVNPLKDKYRDL 773
Cdd:TIGR04523 283 IKELEKQLNQLKSEISD--------LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNkiisQLNEQISQLKKELTNS 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 774 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDdyqkq 853
Cdd:TIGR04523 355 ESENSEKQRELEEKQNEIE-------KLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKE----- 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 854 kdeharhlfdirhKLETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHS 933
Cdd:TIGR04523 423 -------------LLEKEI---ERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 934 RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKearaRDAANQQLSRANL--- 1010
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE----LNKDDFELKKENLeke 562
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1845979720 1011 ---LNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1048
Cdd:TIGR04523 563 ideKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIK 603
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
770-1534 |
5.50e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 81.22 E-value: 5.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 770 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKIlgelehaqkaaHLAEQQLKEIKiqrd 848
Cdd:TIGR04523 24 YKNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKnLNKDEEKINNSNNKI-----------KILEQQIKDLN---- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 849 dyqkqkdeharhlfdirHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLE 928
Cdd:TIGR04523 89 -----------------DKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 929 NELhsrsgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEarardaanqqlSRA 1008
Cdd:TIGR04523 152 KEL-------EKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKI-----------QKN 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1009 NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvp 1088
Cdd:TIGR04523 214 KSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT---------------------------------------- 253
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1089 aaediesrgggeidipssgdvihgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDR---WK 1165
Cdd:TIGR04523 254 ---------------------------------------QLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQlnqLK 294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1166 RELERLENEKD-----DLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHDKHLSdLDDEKEQYG 1240
Cdd:TIGR04523 295 SEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNE----QISQLKKELTNSESENSE-KQRELEEKQ 369
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1241 KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIkdewddfrndaDKEIQKWKTDAYTV 1320
Cdd:TIGR04523 370 NEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELL-----------EKEIERLKETIIKN 438
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1321 RSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEMDLES-------TQNR 1393
Cdd:TIGR04523 439 NSEIKDLTNQDSVKELIIKNLDNTRESLET-------QLKVLSRSINKIKQNLEQKQKELKSKEKELKKlneekkeLEEK 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1394 LRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTR--LKNRLKSAEDALKELKNSLSHAKTEKERLQNAF 1471
Cdd:TIGR04523 512 VKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELI 591
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1472 REKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQI 1534
Cdd:TIGR04523 592 DQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1241-1893 |
9.22e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 80.75 E-value: 9.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1241 KAVENLKSVEDDL---RDKLNNLEKQLaDSLNRENELEREKRDYDEKINSLygQNQKIKDEWDDFRND---ADKEIQKWK 1314
Cdd:COG1196 176 EAERKLEATEENLerlEDILGELERQL-EPLERQAEKAERYRELKEELKEL--EAELLLLKLRELEAEleeLEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1315 TDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1394
Cdd:COG1196 253 AELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1395 RSLEDQhstlqsdankwrgeldaalrendilksnntnmetdLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREK 1474
Cdd:COG1196 333 EELEEE-----------------------------------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1475 TKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKfgneqiqrksdEYQTTIDDLAHSHRV 1554
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA-----------ELEEEEEEEEEALEE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1555 SEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTfvdggagyVDG 1634
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL--------LAG 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1635 VPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAAS 1714
Cdd:COG1196 519 LRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1715 AG-GRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNL 1793
Cdd:COG1196 599 AAvDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1794 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSL 1873
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
650 660
....*....|....*....|
gi 1845979720 1874 RDKEEQWDSSRFQLETKMRE 1893
Cdd:COG1196 759 PPDLEELERELERLEREIEA 778
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
901-1618 |
1.29e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 80.55 E-value: 1.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 SQINLLRRHNDELDTTIK--GHQGKiTHLENELHSRSGEIEklnDLNQRLQKEKQdiLNQKLKLdgdvqALKETIRKLEN 978
Cdd:pfam15921 49 TQIPIFPKYEVELDSPRKiiAYPGK-EHIERVLEEYSHQVK---DLQRRLNESNE--LHEKQKF-----YLRQSVIDLQT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 979 ELEKLRNENKELVgkEARARDAANQQLSRANLLNK--ELEDT---KQDLKHstDVNKQLEQDIRDLKERLANIGKGGRIS 1053
Cdd:pfam15921 118 KLQEMQMERDAMA--DIRRRESQSQEDLRNQLQNTvhELEAAkclKEDMLE--DSNTQIEQLRKMMLSHEGVLQEIRSIL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1054 RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGrdgrdgrDAGNRGTHTITNTK 1133
Cdd:pfam15921 194 VDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKS-------ESQNKIELLLQQHQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1134 ERIERI----EKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndktENDITELKRK 1209
Cdd:pfam15921 267 DRIEQLisehEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQL-------RSELREAKRM 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1210 HAAEIDKLKSDIsALHDKHLSDLDDEKEQYGKAVENLksveDDlrdklnNLEKQLADSLNRENELEREKRdydekinsly 1289
Cdd:pfam15921 340 YEDKIEELEKQL-VLANSELTEARTERDQFSQESGNL----DD------QLQKLLADLHKREKELSLEKE---------- 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1290 gQNQKIkdeWD-DFRNDADKEIQKWKTDAYTVrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRH 1368
Cdd:pfam15921 399 -QNKRL---WDrDTGNSITIDHLRRELDDRNM--EVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLES 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1369 LEDELADTKGNLVQKEMDLESTQnrlRSLEDQHSTLQ----------SDANKWRGELDAALRENDILKSNN---TNMETD 1435
Cdd:pfam15921 473 TKEMLRKVVEELTAKKMTLESSE---RTVSDLTASLQekeraieatnAEITKLRSRVDLKLQELQHLKNEGdhlRNVQTE 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1436 LTRLKNRLKSAEDALKELKNSL--------SHAKT------EKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD 1501
Cdd:pfam15921 550 CEALKLQMAEKDKVIEILRQQIenmtqlvgQHGRTagamqvEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSD 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1502 ---TNDKLITSDTER------------------NALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSE---D 1557
Cdd:pfam15921 630 lelEKVKLVNAGSERlravkdikqerdqllnevKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQselE 709
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1558 SRLNALQELE------------------ARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRV 1618
Cdd:pfam15921 710 QTRNTLKSMEgsdghamkvamgmqkqitAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
525-1048 |
1.48e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 80.11 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 525 KYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTRSLspgktplpp 603
Cdd:PRK03918 186 KRTENIEELIkEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE------LEKELESL--------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 604 SEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEfLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRT 680
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEfyeEYLDELREIEKRLSRLEEEINGIEER 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 681 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKssTDDARKLRDEMDEH----TNSIQEEFKTRIDELNRRVENLLREN 756
Cdd:PRK03918 330 IKELEEKEERLEELKKKLKELEKRLEELEERHEL--YEEAKAKKEELERLkkrlTGLTPEKLEKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 757 NRLKSEVNPLKDKYRDLE---NEYNSTQRRI----------EEKETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEK 821
Cdd:PRK03918 408 SKITARIGELKKEIKELKkaiEELKKAKGKCpvcgrelteeHRKELLEEYTAELKRieKELKEIEEKERKLRKELRELEK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 822 ILGELEHAQKAAHLAEqQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQdlekngARNNDELDKLRQTISDYES 901
Cdd:PRK03918 488 VLKKESELIKLKELAE-QLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEI------KSLKKELEKLEELKKKLAE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 902 QINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRL---QKEKQDILNQKLKLDGDVQALKETIRKLEN 978
Cdd:PRK03918 561 LEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELkdaEKELEREEKELKKLEEELDKAFEELAETEK 640
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 979 ELEKLRNENKELVGK--EARARDAANQQLSranlLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1048
Cdd:PRK03918 641 RLEELRKELEELEKKysEEEYEELREEYLE----LSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1736-2226 |
1.71e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 1.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1815
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1816 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1895
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1896 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtshEYQLLK 1975
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE---EAALLE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR--------------------VSELQRQLQDANTEKN 2035
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavligveaayeaalEAALAAALQNIVVEDD 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2036 RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLE 2115
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2116 NEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA--QLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2193
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLeaEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER 716
|
490 500 510
....*....|....*....|....*....|...
gi 1845979720 2194 GQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2226
Cdd:COG1196 717 LEEELEEEALEEQLEAEREELLEELLEEEELLE 749
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1783-2120 |
7.71e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.79 E-value: 7.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1783 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRqmKSKMVAAeLQARGKEAQLRHLNEQLKNLRTD 1862
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRE--LELALLV-LRLEELREELEELQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1863 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK 1942
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1943 LRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE 2022
Cdd:TIGR02168 335 LAEELAELEEKLEELKE----------ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2023 LQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTEtdLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKK 2102
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330
....*....|....*...
gi 1845979720 2103 EKITLLKKIELLENEKRR 2120
Cdd:TIGR02168 483 ELAQLQARLDSLERLQEN 500
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
498-1280 |
2.28e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 76.26 E-value: 2.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 498 DLLEELRKIrgggssEGDAELH-KELMTKYEESIERNI-ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL--HE 573
Cdd:TIGR02169 215 ALLKEKREY------EGYELLKeKEALERQKEAIERQLaSLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeEE 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 574 MAQDSEKNVDGTVSIKRTRSlspgktplppsealravrnTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD 653
Cdd:TIGR02169 289 QLRVKEKIGELEAEIASLER-------------------SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEER 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 654 KQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASfQKSSTDDARKLRDEMDEHTNS 733
Cdd:TIGR02169 350 KRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE-LDRLQEELQRLSEELADLNAA 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 734 I------QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD 807
Cdd:TIGR02169 429 IagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 808 LREKYDRVHTDNEKILGEL--------EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARH----------LFDIRHKLE 869
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHGTVaqlgsvgeRYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRrkagratflpLNKMRDERR 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 870 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDeldtTIKGHQGKI--THLENELHSRSGEI------EKL 941
Cdd:TIGR02169 589 DLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIE----AARRLMGKYrmVTLEGELFEKSGAMtggsraPRG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 942 NDLNQRLQKEKQDILNQKL-KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARdaanqqlSRANLLNKELEDTKQ 1020
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLeGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE-------KEIEQLEQEEEKLKE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1021 DLKHSTDVNKQLEQDIRDLKERLANIGKggRIS-RDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVpaaEDIESRGGG 1099
Cdd:TIGR02169 738 RLEELEEDLSSLEQEIENVKSELKELEA--RIEeLEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL---EEEVSRIEA 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1100 EIDipsSGDVIHGRDGRDGRDAGNRgthtITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKR---ELERLENEKD 1176
Cdd:TIGR02169 813 RLR---EIEQKLNRLTLEKEYLEKE----IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEleaALRDLESRLG 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1177 DLERRIRELEDELSQIGRGNDKTENDItELKRKHAAEidkLKSDISALHDKhLSDLDDEKEQ----------YGKAVENL 1246
Cdd:TIGR02169 886 DLKKERDELEAQLRELERKIEELEAQI-EKKRKRLSE---LKAKLEALEEE-LSEIEDPKGEdeeipeeelsLEDVQAEL 960
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 1247 KSVE------------------------DDLRDKLNNLEKQLADSLNRENELEREKRD 1280
Cdd:TIGR02169 961 QRVEeeiralepvnmlaiqeyeevlkrlDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1785-2104 |
3.20e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 3.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1785 RYRNIEDNLQDAEEE-----RRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNL 1859
Cdd:COG1196 214 RYRELKEELKELEAEllllkLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1860 RTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsdtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDD 1939
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAEL-------EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1940 TDKLRRDLTKAESVENELRKtidiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 2019
Cdd:COG1196 367 LLEAEAELAEAEEELEELAE----------ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2020 VSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG 2099
Cdd:COG1196 437 EEEEEEALEEAAEEEAELEEEEEALLELL-------AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
....*
gi 1845979720 2100 WKKEK 2104
Cdd:COG1196 510 VKAAL 514
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1942-2226 |
4.56e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.36 E-value: 4.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1942 KLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2021
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2022 ELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWK 2101
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2102 KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELykncaqlqqqiAQLEMENGNRILELTNKQREE 2181
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL-----------EEALAELEEEEEEEEEALEEA 447
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1845979720 2182 QERQLIRMRQEKGQIEKVIENRERThrnriKQLEDQIAILRDQLD 2226
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEA-----ALLEAALAELLEELA 487
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
729-1527 |
4.64e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.15 E-value: 4.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 729 EHTNSIQEEFKTRIDELNRRvenlLRENNRLKSevnplKDKYRdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDL 808
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRR----LNESNELHE-----KQKFY-LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 809 REKY-DRVHtdnekilgELEHAQKaahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLeteikgrQDLEKNGARNND 887
Cdd:pfam15921 144 RNQLqNTVH--------ELEAAKC---LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSIL-------VDFEEASGKKIY 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 888 ELDKLrqTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEklNDLNQRLQKEKQDILNQKLKLDGDVQ 967
Cdd:pfam15921 206 EHDSM--STMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQ--NKIELLLQQHQDRIEQLISEHEVEIT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 968 ALKETIRKLENELEKLRNEnKELVGKEARARDAAN-QQLSranllnkELEDTKQDLKHSTDVNKQLEQD-IRDLKERL-- 1043
Cdd:pfam15921 282 GLTEKASSARSQANSIQSQ-LEIIQEQARNQNSMYmRQLS-------DLESTVSQLRSELREAKRMYEDkIEELEKQLvl 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1044 ANigkggriSRDSTTGTDGGAFGDRSSVADPSRTRGAAGstvfvpaaediesrgggeidipssgdvIHGRDgrdgrdagn 1123
Cdd:pfam15921 354 AN-------SELTEARTERDQFSQESGNLDDQLQKLLAD---------------------------LHKRE--------- 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1124 rgtHTITNTKERieriEKNILDRYHDDEL-VEHKIREVNDRwKRELERLENEKDDLERRIR-ELEDELSQIGRGNDKTEN 1201
Cdd:pfam15921 391 ---KELSLEKEQ----NKRLWDRDTGNSItIDHLRRELDDR-NMEVQRLEALLKAMKSECQgQMERQMAAIQGKNESLEK 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1202 ---------DITELKRKHAAEIDKLKSDISAlHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNREN 1272
Cdd:pfam15921 463 vssltaqleSTKEMLRKVVEELTAKKMTLES-SERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGD 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1273 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvrseAKALETTNTALKAQLQAANDRIDHLTKTV 1352
Cdd:pfam15921 542 HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT--------AGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1353 NDHTSKVRDLTSQVRHLEDEladtKGNLVQkemdleSTQNRLRSLED---QHSTLQSDANKWRGELDAALRENDILKSNN 1429
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELE----KVKLVN------AGSERLRAVKDikqERDQLLNEVKTSRNELNSLSEDYEVLKRNF 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1430 TN----METDLTRLKNRLKSAEDALKELKNSLshaktekERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDK 1505
Cdd:pfam15921 684 RNkseeMETTTNKLKMQLKSAQSELEQTRNTL-------KSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEA 756
|
810 820
....*....|....*....|..
gi 1845979720 1506 LITSDTERNALRNELQKLSQEL 1527
Cdd:pfam15921 757 MTNANKEKHFLKEEKNKLSQEL 778
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1743-2151 |
6.43e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 74.29 E-value: 6.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1743 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEER---------------------R 1801
Cdd:TIGR04523 205 NLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQnkikkqlsekqkeleqnnkkiK 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1802 ALESRLQSAKTLL-----RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTD------- 1869
Cdd:TIGR04523 285 ELEKQLNQLKSEIsdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESEnsekqre 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1870 --------------IRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELdgalrlsDSKVQD 1935
Cdd:TIGR04523 365 leekqneieklkkeNQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERL-------KETIIK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1936 MKDDTDKLRRDLTKAESVENELRKTIDIQ----SKTSHEYQLLKDQLLNTQNELngannrkQQLENELLNVRSEVRDYKQ 2011
Cdd:TIGR04523 438 NNSEIKDLTNQDSVKELIIKNLDNTRESLetqlKVLSRSINKIKQNLEQKQKEL-------KSKEKELKKLNEEKKELEE 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2012 RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETdlRQQLETAKNEKRvatKELEDLKRRLAQLENERR 2091
Cdd:TIGR04523 511 KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK--KENLEKEIDEKN---KEIEELKQTQKSLKKKQE 585
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 2092 NSSQLSDGWKKEKITLLKKIEL-------LENEKRRTDAAIRETALQREAIEKSLNAMERENKELYK 2151
Cdd:TIGR04523 586 EKQELIDQKEKEKKDLIKEIEEkekkissLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
544-1046 |
6.63e-13 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 74.57 E-value: 6.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 544 QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvsikrtrslspgktplppsEALRAVRNtfrNKDNDIQQ 623
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELD---------------------ELEAQIRG---NGGDRLEQ 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 624 LERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQK----SVDEAERNSRRTDDKLRASEAERVAAEKARK 699
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAeaaaLLEALEEELEALEEALAEAEAALRDLRRELR 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 700 FLEDELAKLQASfQKSSTDDARKLRDEMDEHTNSIQEE---------------------------FKTRI-------DEL 745
Cdd:COG4913 423 ELEAEIASLERR-KSNIPARLLALRDALAEALGLDEAElpfvgelievrpeeerwrgaiervlggFALTLlvppehyAAA 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 746 NRRVENL-LREnnRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQIRY-----------------SDDIRRNIQ---- 802
Cdd:COG4913 502 LRWVNRLhLRG--RLVYErVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwleaelgrrfdyvcvdsPEELRRHPRaitr 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 803 ----KDLDDLREKYDRVHTDNEKILG------------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLF---- 862
Cdd:COG4913 580 agqvKGNGTRHEKDDRRRIRSRYVLGfdnraklaaleaELAELEEELAEAEERLEALEAELDALQERREALQRLAEyswd 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 863 DIRHK-LETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENEL---------H 932
Cdd:COG4913 660 EIDVAsAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdelqdrleaA 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 933 SRSGEIEKLNDLNQRLQKEKQDILNQKLK--LDGDVQALKETIRKLENELEKLRNENKE---LVGKEARARDAANQQLSR 1007
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERELRenLEERIDALRARLNRAEEELERAMRAFNRewpAETADLDADLESLPEYLA 819
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1008 --ANLLNKELEDTKQDLKHS---------TDVNKQLEQDIRDLKERLANI 1046
Cdd:COG4913 820 llDRLEEDGLPEYEERFKELlnensiefvADLLSKLRRAIREIKERIDPL 869
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1840-2217 |
1.45e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.55 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1840 LQARGKEA--QLRHLNEQLKNLrtdldnahTDIrsLRDKEEQWDSSRFQLETkmresdsdTNKYQ-LQIASFESERQILT 1916
Cdd:TIGR02168 170 YKERRKETerKLERTRENLDRL--------EDI--LNELERQLKSLERQAEK--------AERYKeLKAELRELELALLV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1917 EKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRktiDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1996
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR---LEVSELEEEIEELQKELYALANEISRLEQQKQILR 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1997 NELLNVrseVRDYKQrvhdVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKEL 2076
Cdd:TIGR02168 309 ERLANL---ERQLEE----LEAQLEELESKLDELAEELAELEEKLEELKEELE-------SLEAELEELEAELEELESRL 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2077 EDLKrrlAQLENERRNSSQlsdgwkkekitLLKKIELLENEKRRTDAairetalQREAIEKSLNAMERENKELYKNCAQL 2156
Cdd:TIGR02168 375 EELE---EQLETLRSKVAQ-----------LELQIASLNNEIERLEA-------RLERLEDRRERLQQEIEELLKKLEEA 433
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 2157 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVI---ENRERTHRNRIKQLEDQ 2217
Cdd:TIGR02168 434 ELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALdaaERELAQLQARLDSLERL 497
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1737-2225 |
1.72e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.55 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1737 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAK----- 1811
Cdd:TIGR02168 360 LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkelq 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1812 ----------TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQ-- 1879
Cdd:TIGR02168 440 aeleeleeelEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGls 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1880 ------WDSSRFQ------LETKMRES-----DSDTNKYQLQIASFESER----------QILTEKIKELDGALRLSDSK 1932
Cdd:TIGR02168 520 gilgvlSELISVDegyeaaIEAALGGRlqavvVENLNAAKKAIAFLKQNElgrvtflpldSIKGTEIQGNDREILKNIEG 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1933 VQDMKDDTDKLRRDLTKAES-------VENELRKTIDIQSKTSHEYQLLKDQ--------------------LLNTQNEL 1985
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgdlvrpggvitggsaktnssILERRREI 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1986 NGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETA 2065
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2066 KNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERE 2145
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2146 NKELykncaqlqqqiaQLEMENGNRILELTNKQREEQ-------ERQLIRMRQEKGQIEKVIENRE----------RTHR 2208
Cdd:TIGR02168 840 LEDL------------EEQIEELSEDIESLAAEIEELeelieelESELEALLNERASLEEALALLRseleelseelRELE 907
|
570
....*....|....*..
gi 1845979720 2209 NRIKQLEDQIAILRDQL 2225
Cdd:TIGR02168 908 SKRSELRRELEELREKL 924
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
796-1415 |
1.83e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.15 E-value: 1.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 796 DIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGR 875
Cdd:PRK02224 173 DARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGL--ESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 876 QDLEKNGArnndELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDI 955
Cdd:PRK02224 251 EELETLEA----EIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEEL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 956 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARdaanqqlsranlLNKELEDTKQDLKHSTDVNKQLEQD 1035
Cdd:PRK02224 327 RDRLEECRVAAQAHNEEAESLREDADDLEERAEEL--REEAAE------------LESELEEAREAVEDRREEIEELEEE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1036 IRDLKERLANigkggrisrdstTGTDGGAFGDRSS--VADPSRTRGAAGSTvfvpaaediesrgggEIDIPSSGDVIhgR 1113
Cdd:PRK02224 393 IEELRERFGD------------APVDLGNAEDFLEelREERDELREREAEL---------------EATLRTARERV--E 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1114 DGRDGRDAGNRGT-----------HTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK--RELERLENEKDDLER 1180
Cdd:PRK02224 444 EAEALLEAGKCPEcgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEaeDRIERLEERREDLEE 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1181 RIRELEDELsqigrgndktenditELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDL------R 1254
Cdd:PRK02224 524 LIAERRETI---------------EEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLaelkerI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1255 DKLNNLEKQLADSLNRENELE--REKRdydekinslygqnqKIKDEWDDFRNDADKEIQKWKTDAytvrsEAKALETTNT 1332
Cdd:PRK02224 589 ESLERIRTLLAAIADAEDEIErlREKR--------------EALAELNDERRERLAEKRERKREL-----EAEFDEARIE 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1333 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1412
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE-ELRERREALENRVEALEALYDEAEELESMYGDLR 728
|
...
gi 1845979720 1413 GEL 1415
Cdd:PRK02224 729 AEL 731
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
622-1528 |
2.05e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.23 E-value: 2.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 622 QQLERKLKIAESQVKEFLNKFENADEARrrlDKQFADAKREISNLQKSVDEA--ERNSRrTDDKLRASEAErvaaEKARK 699
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELH---EKQKFYLRQSVIDLQTKLQEMqmERDAM-ADIRRRESQSQ----EDLRN 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 700 FLEDELAKLQAS------FQKSSTDDARKLRDEMDEHTNSIQEEFKTRID---------------------ELNRRVENL 752
Cdd:pfam15921 146 QLQNTVHELEAAkclkedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDfeeasgkkiyehdsmstmhfrSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 753 LRENNR----LKSEVNPLKDKYRDLENEynsTQRRIEEKETQirYSDDIRRNIQK---DLDDLREKYDRVHTDNEKILGE 825
Cdd:pfam15921 226 LRELDTeisyLKGRIFPVEDQLEALKSE---SQNKIELLLQQ--HQDRIEQLISEhevEITGLTEKASSARSQANSIQSQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 826 LEHAQKAA---------HLAE------QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELD 890
Cdd:pfam15921 301 LEIIQEQArnqnsmymrQLSDlestvsQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 891 KLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---------- 960
Cdd:pfam15921 381 KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMaaiqgknesl 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 961 ----KLDGDVQALKETIRKLENEL--EKLRNENKE---------LVGKEaRARDAANQQL----SRANLLNKELEDTKQD 1021
Cdd:pfam15921 461 ekvsSLTAQLESTKEMLRKVVEELtaKKMTLESSErtvsdltasLQEKE-RAIEATNAEItklrSRVDLKLQELQHLKNE 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1022 LKHSTDVNKQLEQdirdLKERLANIGKGGRISRdsttgtdggafgdrssvadpsrtrgaagstvfvpaaEDIESrgggei 1101
Cdd:pfam15921 540 GDHLRNVQTECEA----LKLQMAEKDKVIEILR------------------------------------QQIEN------ 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1102 dipssgdvIHGRDGRDGRDAGNRgthtitntkerieRIEKNILDryhddelvehkiREVNDRwKRELERLENEKDDLERR 1181
Cdd:pfam15921 574 --------MTQLVGQHGRTAGAM-------------QVEKAQLE------------KEINDR-RLELQEFKILKDKKDAK 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1182 IRELEDELSQIgrgndktenditelkrkhaaEIDKLKsdisalhdkhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLE 1261
Cdd:pfam15921 620 IRELEARVSDL--------------------ELEKVK-------------LVNAGSERLRAVKDIKQERDQLLNEVKTSR 666
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1262 KQLaDSLNRENELerEKRDYDEKINSLYGQNQKIKdewddfrndadKEIQKWKTDAYTVRSEAKALETTNT-ALKAQLQa 1340
Cdd:pfam15921 667 NEL-NSLSEDYEV--LKRNFRNKSEEMETTTNKLK-----------MQLKSAQSELEQTRNTLKSMEGSDGhAMKVAMG- 731
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1341 andridhLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLESTQNRlrsLEDQHSTLQSDANKWRGELDAALR 1420
Cdd:pfam15921 732 -------MQKQITAKRGQIDALQSKIQFLEEAMT----NANKEKHFLKEEKNK---LSQELSTVATEKNKMAGELEVLRS 797
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1421 ENDILKSNNTNMETDLTRLKNRLKSAEDALKE-----LKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQfdTKLTKL 1495
Cdd:pfam15921 798 QERRLKEKVANMEVALDKASLQFAECQDIIQRqeqesVRLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASF--TRTHSN 875
|
970 980 990
....*....|....*....|....*....|....*..
gi 1845979720 1496 RNELQDTNDKLITSDTERNALRN----ELQKLSQELK 1528
Cdd:pfam15921 876 VPSSQSTASFLSHHSRKTNALKEdptrDLKQLLQELR 912
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1793-2139 |
3.20e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.41 E-value: 3.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1793 LQDAEEERRALESRLQSAKTLLrsqEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRS 1872
Cdd:TIGR02169 172 KEKALEELEEVEENIERLDLII---DEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1873 LRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE 1951
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1952 SVENELRKTIDIQSKTSHEYQLLKDQLL----NTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2027
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRDKLTeeyaELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2028 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2107
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKL 488
|
330 340 350
....*....|....*....|....*....|..
gi 1845979720 2108 LKKIELLENEKRRTDAAIRETALQREAIEKSL 2139
Cdd:TIGR02169 489 QRELAEAEAQARASEERVRGGRAVEEVLKASI 520
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
755-1410 |
4.22e-12 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 71.86 E-value: 4.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 755 ENNRLKSEVNPLKDKYRDLENEYNStqrrIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAH 834
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEISN----IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 835 LAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLrrhnDELD 914
Cdd:PRK01156 236 NLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDI----ENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 915 TTIKGHQGKITHLEnELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKE 994
Cdd:PRK01156 312 QILSNIDAEINKYH-AIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 995 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRI-SRDSTTGTDGGAFGDRSSvad 1073
Cdd:PRK01156 391 AFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMlNGQSVCPVCGTTLGEEKS--- 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1074 psrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgRDAGNRGTHTITNTKERIERIEKNILDRyhdDELV 1153
Cdd:PRK01156 468 ---------------------------------------------NHIINHYNEKKSRLEEKIREIEIEVKDI---DEKI 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1154 EHKIREVNDRWKRELERLENEKDDLERRIRELEDElsqigrgndktENDITELKRKHaaeiDKLKSDISALHDKHLSDLD 1233
Cdd:PRK01156 500 VDLKKRKEYLESEEINKSINEYNKIESARADLEDI-----------KIKINELKDKH----DKYEEIKNRYKSLKLEDLD 564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1234 DEKEQYGKAVENLKSVE-DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGqnqKIKDEWDDFRNDAdKEIQK 1312
Cdd:PRK01156 565 SKRTSWLNALAVISLIDiETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIR---EIENEANNLNNKY-NEIQE 640
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1313 WKTDAYTVRSEAKalettntalkaQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQN 1392
Cdd:PRK01156 641 NKILIEKLRGKID-----------NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRT 709
|
650
....*....|....*...
gi 1845979720 1393 RLRSLEDQHSTLQSDANK 1410
Cdd:PRK01156 710 RINELSDRINDINETLES 727
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
769-1615 |
4.49e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 769 KYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLrEKYDRVHTDNEKILGELEHAQKAAHlaEQQLKEIKIQRD 848
Cdd:TIGR02169 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA-ERYQALLKEKREYEGYELLKEKEAL--ERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 849 DYQKQKDEHARHLFDIRHKLET-EIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHL 927
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEiEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 928 ENELHSRSGEIEKLNDLNQRLQKEKQdilnqklkldgdvqALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSR 1007
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRD--------------KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1008 ANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgAAGSTVFV 1087
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGI---------------------------------EAKINELE 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1088 PAAEDIesrgggeidipssgdvihgrdgrdgrdagnrgthtitntKERIERIEKNIldryhddelveHKIREVNDRWKRE 1167
Cdd:TIGR02169 441 EEKEDK---------------------------------------ALEIKKQEWKL-----------EQLAADLSKYEQE 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1168 LERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVE--- 1244
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEA----EAQARASEERVRGGRAVEEVLKASIQGVHGT-VAQLGSVGERYATAIEvaa 545
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1245 ----NLKSVEDD---------LRDKlnNLEKQLADSLNRENELEREKR---------------DYDEKINSLYGQN---- 1292
Cdd:TIGR02169 546 gnrlNNVVVEDDavakeaielLKRR--KAGRATFLPLNKMRDERRDLSilsedgvigfavdlvEFDPKYEPAFKYVfgdt 623
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1293 ------QKIKDEWDDFRN-DADKEIQKwKTDAYTVRSEA-KALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTS 1364
Cdd:TIGR02169 624 lvvediEAARRLMGKYRMvTLEGELFE-KSGAMTGGSRApRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1365 QVRHLEDELADTKGNLVQKEMDLEStqnrlrsledqhstLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1444
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQ--------------LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1445 SAEDALKELKNSLshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNalrnELQKLS 1524
Cdd:TIGR02169 769 ELEEDLHKLEEAL--NDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQ----ELQEQR 842
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1525 QELKFGNEQIQRKSDEYQTTIDDLAhshrvsedsrlnalQELEARKYEINDLTSRL-------DSTEQRLATLQQDYIKA 1597
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENLNGKKEELE--------------EELEELEAALRDLESRLgdlkkerDELEAQLRELERKIEEL 908
|
890
....*....|....*...
gi 1845979720 1598 DSERDILSDALRRFQSSA 1615
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKL 926
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1745-2149 |
5.09e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.61 E-value: 5.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1745 QSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQR 1824
Cdd:PRK02224 310 EAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEEL 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1825 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdSSRFQLETKMRESDSD------- 1897
Cdd:PRK02224 390 EEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEE--AEALLEAGKCPECGQPvegsphv 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1898 --TNKYQLQIASFESERQILTEKIKELDGALrlsdSKVQDMKDDTDKLRRDLTKAESVEnelrKTIDIQSKTSHEYQLLK 1975
Cdd:PRK02224 468 etIEEDRERVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIERLEERREDLE----ELIAERRETIEEKRERA 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLlntqnelngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflsvekvVNTMRTTE 2055
Cdd:PRK02224 540 EEL----------RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER--------IRTLLAAI 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2056 TDLRQQLETaKNEKRVATKELEDLKRRLAQLENERRnsSQLSDGWKKEKITLLK-KIELLENEKRRTDAAIRETALQREA 2134
Cdd:PRK02224 602 ADAEDEIER-LREKREALAELNDERRERLAEKRERK--RELEAEFDEARIEEAReDKERAEEYLEQVEEKLDELREERDD 678
|
410
....*....|....*
gi 1845979720 2135 IEKSLNAMERENKEL 2149
Cdd:PRK02224 679 LQAEIGAVENELEEL 693
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1736-2204 |
5.22e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.63 E-value: 5.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTI------NQKETRYRNIEDNLQDAEEERRALESRLQS 1809
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIklsefyEEYLDELREIEKRLSRLEEEINGIEERIKE 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1810 AKTLLRSQEEALKQRDE-ERRQMKSKMVAAELQ-ARGKEAQLRHLNEQLKNLrtDLDNAHTDIRSLRDKEEQWDSSRFQL 1887
Cdd:PRK03918 333 LEEKEERLEELKKKLKElEKRLEELEERHELYEeAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKI 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1888 ETKMRESDSDTNKYQLQIASFESERQI-------LTEKIKEldGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKT 1960
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKAKGKcpvcgreLTEEHRK--ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKV 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1961 IDIQSKTSHEYQLLkDQLLNTQNELNGANNRKQQLENEllnvrsEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEdr 2040
Cdd:PRK03918 489 LKKESELIKLKELA-EQLKELEEKLKKYNLEELEKKAE------EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA-- 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2041 flSVEKVVNTMRTTETDLRQQLEtaknekRVATKELEDLKRRLAQLENERRNSSQLSDGwKKEKITLLKKIELLENEKRR 2120
Cdd:PRK03918 560 --ELEKKLDELEEELAELLKELE------ELGFESVEELEERLKELEPFYNEYLELKDA-EKELEREEKELKKLEEELDK 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2121 TDAAIRETALQREAIEKSLNAMERE-NKELYKNcAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKV 2199
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKySEEEYEE-LREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
....*
gi 1845979720 2200 IENRE 2204
Cdd:PRK03918 710 KKELE 714
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
863-1473 |
5.83e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.63 E-value: 5.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 863 DIRHKLETEIKGRQDLE---KNGARNNDELDKLRQTISDY---ESQI-NLLRRHNDELDTTIKghqgKITHLENELHSRS 935
Cdd:PRK03918 145 ESREKVVRQILGLDDYEnayKNLGEVIKEIKRRIERLEKFikrTENIeELIKEKEKELEEVLR----EINEISSELPELR 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 936 GEIEKLNDLNQRLQKEKQDILN---QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLsRANLLN 1012
Cdd:PRK03918 221 EELEKLEKEVKELEELKEEIEElekELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAE-EYIKLS 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1013 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpAAED 1092
Cdd:PRK03918 300 EFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE----------------------------------------KEER 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1093 IESRGGGEIDIPSSGDVIHGRdgrdgrdagNRGTHTITNTKERIERIEKNILDRyhDDELVEHKIREVNDRWK---RELE 1169
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEER---------HELYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEeieEEIS 408
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1170 RLENEKDDLERRIRELEDELSQIGRGNDK--------TENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1241
Cdd:PRK03918 409 KITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEYTAELKRIEKELKEIEEK-ERKLRKELRELEK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1242 AVENLK--SVEDDLRDKLNNLEKQLaDSLNREnELEREKRDYD---EKINSLYGQNQKIKDEWddfrndadKEIQKWKTD 1316
Cdd:PRK03918 488 VLKKESelIKLKELAEQLKELEEKL-KKYNLE-ELEKKAEEYEklkEKLIKLKGEIKSLKKEL--------EKLEELKKK 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1317 AYTVRSEAKALETTNTALKAQL--------QAANDRIDHLTKTVNDHTSkVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1388
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELeelgfesvEELEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELA 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1389 STQNRLRSLEDQHSTLQSDANKwrgeldaalRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQ 1468
Cdd:PRK03918 637 ETEKRLEELRKELEELEKKYSE---------EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE 707
|
....*
gi 1845979720 1469 NAFRE 1473
Cdd:PRK03918 708 KAKKE 712
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
614-1262 |
6.79e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.25 E-value: 6.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 614 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVA 693
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISS-------ELPELREELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 694 AEKARKFLEdELAKLQASFQKSstddARKLRDEMDEHTNSIqEEFKTRIDELNRRVENLlrennrlkSEVNPLKDKYRDL 773
Cdd:PRK03918 233 LEELKEEIE-ELEKELESLEGS----KRKLEEKIRELEERI-EELKKEIEELEEKVKEL--------KELKEKAEEYIKL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 774 E---NEYNSTQRRIEEKETqiRYSDDIrRNIQKDLDDLREKYDRVhtdnEKILGELEHAQ------KAAHLAEQQLKEIK 844
Cdd:PRK03918 299 SefyEEYLDELREIEKRLS--RLEEEI-NGIEERIKELEEKEERL----EELKKKLKELEkrleelEERHELYEEAKAKK 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 845 IQRDDYQKQKDEhaRHLFDIRHKLETEIKGRQDLEKngarnndELDKLRQTISDYESQINLLRRHNDELdttiKGHQGKI 924
Cdd:PRK03918 372 EELERLKKRLTG--LTPEKLEKELEELEKAKEEIEE-------EISKITARIGELKKEIKELKKAIEEL----KKAKGKC 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 925 ---------THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETI--RKLENELEKLRNENKELVGK 993
Cdd:PRK03918 439 pvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIklKELAEQLKELEEKLKKYNLE 518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 994 EARARDAANQQL-SRANLLNKELEDTKQDLKHSTDVNKQ---LEQDIRDLKERLANIGKggrisrdsttgtdggafgdrs 1069
Cdd:PRK03918 519 ELEKKAEEYEKLkEKLIKLKGEIKSLKKELEKLEELKKKlaeLEKKLDELEEELAELLK--------------------- 577
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1070 svadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrdgrdgrDAGNRGTHTITNTKERIERIEKnILDRYhd 1149
Cdd:PRK03918 578 --------------------------------------------------ELEELGFESVEELEERLKELEP-FYNEY-- 604
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1150 delveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKRKHAAEIDKLKSDISALHDKHL 1229
Cdd:PRK03918 605 -----LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSEEEYEELREEYLELSREL 675
|
650 660 670
....*....|....*....|....*....|...
gi 1845979720 1230 SDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1262
Cdd:PRK03918 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
550-1288 |
8.03e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 8.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 550 LEAELRRNREKLnEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSpgktplppsEALRAVRNTFRNKDNDIQQLERKLK 629
Cdd:COG1196 194 ILGELERQLEPL-ERQAEKAERYRELKEELKELEAELLLLKLRELE---------AELEELEAELEELEAELEELEAELA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 630 IAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQ 709
Cdd:COG1196 264 ELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 710 ASfqksstddarklrdemdehtnsiQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKET 789
Cdd:COG1196 344 EE-----------------------LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 790 QIrysddirRNIQKDLDDLREkydrvhtdnekilgELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLE 869
Cdd:COG1196 401 QL-------EELEEAEEALLE--------------RLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 870 TEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlenELHSRSGEIEKLNDLNQRLQ 949
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY----------------EGFLEGVKAALLLAGLRGLA 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 950 KEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANqQLSRANLLnkELEDTKQDLKHSTDVN 1029
Cdd:COG1196 524 GAVAVLI-------GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAA-KAGRATFL--PLDKIRARAALAAALA 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1030 KQLEQDIRDLKERLAnigkggrISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDV 1109
Cdd:COG1196 594 RGAIGAAVDLVASDL-------READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1110 IHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREV--NDRWKRELERLENEKDDLERRIRELED 1187
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLeeELEEEALEEQLEAEREELLEELLEEEE 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1188 ELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALhdkhlsdlddekeqyGkAVeNLKSVE--DDLRDKLNNLEKQLA 1265
Cdd:COG1196 747 LLEEEALEELPEPPDLEELER----ELERLEREIEAL---------------G-PV-NLLAIEeyEELEERYDFLSEQRE 805
|
730 740
....*....|....*....|...
gi 1845979720 1266 DslnreneLEREKRDYDEKINSL 1288
Cdd:COG1196 806 D-------LEEARETLEEAIEEI 821
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1905-2254 |
1.33e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.48 E-value: 1.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1905 IASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI-QSKTSHEYQLLKDQLLNTQN 1983
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYeGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1984 ELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELqrqlqdANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLE 2063
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL------GEEEQLRVKEKIGELEAEIASLERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2064 TAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2143
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2144 RENKELYKNCAQLQQQIAQLEMENGN----------RILEL----TNKQRE--EQERQLIRMRQEKGQIEKVIENRERTH 2207
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADlnaaiagieaKINELeeekEDKALEikKQEWKLEQLAADLSKYEQELYDLKEEY 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2208 R---NRIKQLEDQIAILRDQLDGERRRRREYVDRSMVndigrLGSNVLGI 2254
Cdd:TIGR02169 479 DrveKELSKLQRELAEAEAQARASEERVRGGRAVEEV-----LKASIQGV 523
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
330-1051 |
1.69e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 1.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 330 IARLDEERRRSDEYRmQWENERQKSLSLEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQR 409
Cdd:PTZ00121 1156 IARKAEDARKAEEAR-KAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEE 1234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 410 VRKQFSDLKTHTEEDLDKQKAEFTRAiRNVNNISRNAAFSAgagdglglygledggdvnrttnnYEKVFIETIKRMNGTG 489
Cdd:PTZ00121 1235 AKKDAEEAKKAEEERNNEEIRKFEEA-RMAHFARRQAAIKA-----------------------EEARKADELKKAEEKK 1290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 490 GAGSASSAdllEELRKIRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGAlK 569
Cdd:PTZ00121 1291 KADEAKKA---EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK-A 1366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 570 KLHEMAQDSEKnvdgtvsiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAEsQVKEFLNKFENADEAR 649
Cdd:PTZ00121 1367 EAAEKKKEEAK--------KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD-EAKKKAEEKKKADEAK 1437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 650 RRldkqfADAKREISNLQKSVDE---AERNSRRTDDKLRASEAERVAAEKARKfledELAKLQASFQKSSTDDARKLRDE 726
Cdd:PTZ00121 1438 KK-----AEEAKKADEAKKKAEEakkAEEAKKKAEEAKKADEAKKKAEEAKKA----DEAKKKAEEAKKKADEAKKAAEA 1508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 727 MDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQirysdDIRRNIQKDLD 806
Cdd:PTZ00121 1509 KKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA-----EEDKNMALRKA 1583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 807 DLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 886
Cdd:PTZ00121 1584 EEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEE---LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 887 DELDKLRQTISDYESQINLLRRHNDELDTTikghqgkithlENELHSRSGEIEKLNDLNQRLQKEKQDIlnQKLKLDGDV 966
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKA-----------AEALKKEAEEAKKAEELKKKEAEEKKKA--EELKKAEEE 1727
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 967 QALK-ETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQD--IRDLKERL 1043
Cdd:PTZ00121 1728 NKIKaEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDkkIKDIFDNF 1807
|
....*...
gi 1845979720 1044 ANIGKGGR 1051
Cdd:PTZ00121 1808 ANIIEGGK 1815
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
328-1042 |
2.19e-11 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 69.69 E-value: 2.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 328 EMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLRREFERYANDSKD----KEKTFINRERNLAQYLSDEQRKMLDL 403
Cdd:TIGR00606 238 EIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSElelkMEKVFQGTDEQLNDLYHNHQRTVREK 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 404 WTELQRVRKQFSDLKTHTEEdLDKQKAEFT--------RAIRNVNNISRNAAFSAGAGDGLGLYGLEDGGDVNRTTNNYE 475
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRL-LNQEKTELLveqgrlqlQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFH 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 476 KVFIEtikRMNGTGGAGSASSADLLEELR-------KIRGGGSSEGDA-ELHKELMTKYEESIERNIELESRGDDSQRKI 547
Cdd:TIGR00606 397 TLVIE---RQEDEAKTAAQLCADLQSKERlkqeqadEIRDEKKGLGRTiELKKEILEKKQEELKFVIKELQQLEGSSDRI 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 548 AELEAELRRNREKL--------------------NEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLSPGKTplppSEAL 607
Cdd:TIGR00606 474 LELDQELRKAERELskaeknsltetlkkevkslqNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKM----DKDE 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 608 RAVRNTFRNKDNDIQQLER--KLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLR 685
Cdd:TIGR00606 550 QIRKIKSRHSDELTSLLGYfpNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 686 ---ASEAERVAAEKARKFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTR--IDELNRRVENLLREnnr 758
Cdd:TIGR00606 630 dvcGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEaeLQEFISDLQSKLRL--- 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 759 lksevnpLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQK------- 831
Cdd:TIGR00606 707 -------APDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETllgtimp 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 832 AAHLAEQQLKEIKIQRDDYQKQKDEHARHlfdirhkleteikGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 911
Cdd:TIGR00606 780 EEESAKVCLTDVTIMERFQMELKDVERKI-------------AQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIE 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 912 ELDTTIKGHQGKITHLE---NELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENK 988
Cdd:TIGR00606 847 LNRKLIQDQQEQIQHLKsktNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKE 926
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 989 ELVGKEARARDAANQqlsranllnkELEDTKQDLKHSTDVNKQLEQDIRDLKER 1042
Cdd:TIGR00606 927 ELISSKETSNKKAQD----------KVNDIKEKVKNIHGYMKDIENKIQDGKDD 970
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1744-2225 |
2.27e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 2.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1744 LQSLLNKIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKtllrsqeEALKQ 1823
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQ-------RLSEELADLNAAIAGIEAKINELEEEKEDKA-------LEIKK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1824 RDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkEEQWDSSRFQLETK---------MRES 1894
Cdd:TIGR02169 453 QEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE--ERVRGGRAVEEVLKasiqgvhgtVAQL 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1895 DSDTNKYQLQIASFESER----------------QILteKIKELDGALRLSDSKVQDMKDDTDKLRR------------- 1945
Cdd:TIGR02169 531 GSVGERYATAIEVAAGNRlnnvvveddavakeaiELL--KRRKAGRATFLPLNKMRDERRDLSILSEdgvigfavdlvef 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1946 DLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNEL---NGA-------------------------NNRKQQLEN 1997
Cdd:TIGR02169 609 DPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGELfekSGAmtggsraprggilfsrsepaelqrlRERLEGLKR 688
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1998 ELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 2077
Cdd:TIGR02169 689 ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE 768
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2078 DLKRRLAQLENERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIRET--ALQREAIEKSLNAMERENKELYKNCAQ 2155
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQ--AELSKLEEEVSRIEARLREIeqKLNRLTLEKEYLEKEIQELQEQRIDLK 846
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2156 LQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRE---RTHRNRIKQLEDQIAILRDQL 2225
Cdd:TIGR02169 847 EQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEaqlRELERKIEELEAQIEKKRKRL 919
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1129-1593 |
2.30e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 69.71 E-value: 2.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKR 1208
Cdd:PRK03918 202 LEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1209 KhAAEIDKLKSD------ISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------KLNNLEKQLADSLNRENELER 1276
Cdd:PRK03918 281 K-VKELKELKEKaeeyikLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEleekeeRLEELKKKLKELEKRLEELEE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1277 EKRDYdEKINSLYGQNQKIKDEWDDFR-NDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT---- 1351
Cdd:PRK03918 360 RHELY-EEAKAKKEELERLKKRLTGLTpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkc 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1352 ---------------VNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDL--ESTQNRLRSLEDQHSTLQSDANKWRGE 1414
Cdd:PRK03918 439 pvcgrelteehrkelLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLkkESELIKLKELAEQLKELEEKLKKYNLE 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1415 -LDAALRENDILKSNNTNMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQNAFREKT-KQADHLNQLASQFD 1489
Cdd:PRK03918 519 eLEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1490 T------KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDlaHSHRVSEDSRLNAL 1563
Cdd:PRK03918 599 PfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSE--EEYEELREEYLELS 672
|
490 500 510
....*....|....*....|....*....|
gi 1845979720 1564 QELEARKYEINDLTSRLDSTEQRLATLQQD 1593
Cdd:PRK03918 673 RELAGLRAELEELEKRREEIKKTLEKLKEE 702
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1177-1606 |
2.40e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.30 E-value: 2.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1177 DLERRIRELEDEL-SQIgrgNDKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlDDEKEQYGKAVENLKSVEDDlRD 1255
Cdd:PRK02224 180 RVLSDQRGSLDQLkAQI---EEKEEKDLHERLNGLESELAELDEEIERYEEQR----EQARETRDEADEVLEEHEER-RE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1256 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEiqkwKTDAYTVRSEAKALETTNTAL- 1334
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLD----DADAEAVEARREELEDRDEELr 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1335 ------KAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDA 1408
Cdd:PRK02224 328 drleecRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1409 NKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELK--------------NSLSHAKTEKERL------- 1467
Cdd:PRK02224 408 GNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvETIEEDRERVEELeaeledl 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1468 ---QNAFREKTKQADHLNQLASQFDTKLTKLRN--ELQDTNDKLITSDTERNA-LRNELQKLSQELKFGNEQIQRKSDEY 1541
Cdd:PRK02224 488 eeeVEEVEERLERAEDLVEAEDRIERLEERREDleELIAERRETIEEKRERAEeLRERAAELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1542 QTTIDDLA--HSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQdyiKADSERDILSD 1606
Cdd:PRK02224 568 EEAREEVAelNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAE---LNDERRERLAE 631
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1941-2226 |
2.48e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 2.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1941 DKLRRDLTKAESVENELRK---TIDIQSKTSHEYQLLKDQLLNTQNELNGanNRKQQLENELLNVRSEVRDYKQRVHDVN 2017
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERqlkSLERQAEKAERYKELKAELRELELALLV--LRLEELREELEELQEELKEAEEELEELT 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2018 NRVSELQRQLQDANTEKNRVEDRFLSVEKVVNtmrttetDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS 2097
Cdd:TIGR02168 260 AELQELEEKLEELRLEVSELEEEIEELQKELY-------ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2098 DGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEME---NGNRILEL 2174
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierLEARLERL 412
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 2175 T-NKQREEQERQLIRMRQEKGQIEKVIEN-------------RERTHRNRIKQLEDQIAILRDQLD 2226
Cdd:TIGR02168 413 EdRRERLQQEIEELLKKLEEAELKELQAEleeleeeleelqeELERLEEALEELREELEEAEQALD 478
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
520-1033 |
2.63e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 69.38 E-value: 2.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIErniELESrgddsQRKIAELE-AELRRNREKLNEAQGALK-KLHEMAQDSEKNvDGTVSIKRTRSLSPG 597
Cdd:pfam15921 334 REAKRMYEDKIE---ELEK-----QLVLANSElTEARTERDQFSQESGNLDdQLQKLLADLHKR-EKELSLEKEQNKRLW 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 598 KTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAES----QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEA 673
Cdd:pfam15921 405 DRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEEL 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 674 E------RNSRRT--------DDKLRASEAERVAAEKARKFLEDELAKLQasFQKSSTDDARKLRDEMDEHTNSIQEEFK 739
Cdd:pfam15921 485 TakkmtlESSERTvsdltaslQEKERAIEATNAEITKLRSRVDLKLQELQ--HLKNEGDHLRNVQTECEALKLQMAEKDK 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 740 TrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNStqRRIEEKETQI--RYSDDIRRNIQKDLDDLR-EKYDRVH 816
Cdd:pfam15921 563 V-IEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEIND--RRLELQEFKIlkDKKDAKIRELEARVSDLElEKVKLVN 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 817 TDNEKILGELEHAQKAahlaEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTI 896
Cdd:pfam15921 640 AGSERLRAVKDIKQER----DQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTL 715
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 897 SDYESQinllrrhNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 976
Cdd:pfam15921 716 KSMEGS-------DGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 977 ENELEKLRNENKELVGKEAR---ARDAANQQLSRAN--LLNKELEDTKQDLKHSTDVnKQLE 1033
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANmevALDKASLQFAECQdiIQRQEQESVRLKLQHTLDV-KELQ 849
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
840-1350 |
3.70e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 68.64 E-value: 3.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 840 LKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 919
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 920 HQgkithLENELHSRSgeiEKLNDLNQRLQKEKQDILnqklkldgDVQALKETIRKLENELEKLRNE-NKELVGKEARAR 998
Cdd:COG4717 128 LP-----LYQELEALE---AELAELPERLEELEERLE--------ELRELEEELEELEAELAELQEElEELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 999 DAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA----FGDRSSVADP 1074
Cdd:COG4717 192 EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAAllalLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1075 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRdgrdagnrgthtitntkERIERIE-KNILDRYHDDELV 1153
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAL-----------------EELEEEElEELLAALGLPPDL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1154 EHKIREVNDRWKRELERLENEKDDLERRIR--ELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSD 1231
Cdd:COG4717 335 SPEELLELLDRIEELQELLREAEELEEELQleELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ-LEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1232 LDDEKEQYGKAVEnlksvEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQN--QKIKDEWDDFRNDADKE 1309
Cdd:COG4717 414 LLGELEELLEALD-----EEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKAELREL 488
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1845979720 1310 IQKWKTDAYTVRSEAKALE-TTNTALKAQLQAANDRIDHLTK 1350
Cdd:COG4717 489 AEEWAALKLALELLEEAREeYREERLPPVLERASEYFSRLTD 530
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
619-1591 |
4.83e-11 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 68.92 E-value: 4.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 NDIQQLERKLKIAESQVKEFLNKFEnadEARRRLDKQFADAKREISNLQKSVDEAERNSrrTDDKLRASEAERVAAEKAR 698
Cdd:TIGR01612 1111 DEINKIKDDIKNLDQKIDHHIKALE---EIKKKSENYIDEIKAQINDLEDVADKAISND--DPEEIEKKIENIVTKIDKK 1185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 699 KFLEDELAKLQASFQKSSTDDA--RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 776
Cdd:TIGR01612 1186 KNIYDEIKKLLNEIAEIEKDKTslEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENE 1265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 777 YNSTQRRIEEKET-QIRYSDD-----IRRNIQKDLDDLREKYDRVHTDNEK------ILGELE----HAQKAAHLAEQQL 840
Cdd:TIGR01612 1266 MGIEMDIKAEMETfNISHDDDkdhhiISKKHDENISDIREKSLKIIEDFSEesdindIKKELQknllDAQKHNSDINLYL 1345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 841 KEIKiqrDDYQKQKDEHARHLFDIRHKLETEIkgrqdlEKNGARNNDELDKLRQTISDYESQINlLRRHNDELDTTIKGH 920
Cdd:TIGR01612 1346 NEIA---NIYNILKLNKIKKIIDEVKEYTKEI------EENNKNIKDELDKSEKLIKKIKDDIN-LEECKSKIESTLDDK 1415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 921 Q-----GKITHLENELHSRSG---------------------EIEKLNDLNQRLQKEKQDilNQKLKLDGDVQALKETIR 974
Cdd:TIGR01612 1416 DideciKKIKELKNHILSEESnidtyfknadennenvlllfkNIEMADNKSQHILKIKKD--NATNDHDFNINELKEHID 1493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 975 KlENELEKLRNENKELVGKEARARDAANQQLSRanLLNKELE-DTKQDLKHSTDVNKQLEQDIRDLKERL-----ANIGK 1048
Cdd:TIGR01612 1494 K-SKGCKDEADKNAKAIEKNKELFEQYKKDVTE--LLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFileaeKSEQK 1570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1049 GGRISRDSTTGTDGGAFGDRSSVAdpsrtrgaagstvfvpaaediesrgggEIDIPSSGDVIHGRdgrdgrdagnrgTHT 1128
Cdd:TIGR01612 1571 IKEIKKEKFRIEDDAAKNDKSNKA---------------------------AIDIQLSLENFENK------------FLK 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERI-------ERIEKNILDRYHDDELVEHKIREVNDRWKRE-LERLENEKDDLERRIRELEDELSQIgrgnDKTE 1200
Cdd:TIGR01612 1612 ISDIKKKIndclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEI----EKIE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1201 NDITELKRKHAAEI-DKLKSDISALHDKhlsdLDDEKEQYGKAVENLKSVED-------DLRDKLNNLEKQLADSLNREN 1272
Cdd:TIGR01612 1688 IDVDQHKKNYEIGIiEKIKEIAIANKEE----IESIKELIEPTIENLISSFNtndlegiDPNEKLEEYNTEIGDIYEEFI 1763
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1273 ELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQ-KWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT 1351
Cdd:TIGR01612 1764 ELYNIIAGCLETVSKEPITYDEIKNTRINAQNEFLKIIEiEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSK 1843
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1352 VNDHTSKVRDLTSQVRHLEDE--LADTKGNlvQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALREN------- 1422
Cdd:TIGR01612 1844 INEGFDDISKSIENVKNSTDEnlLFDILNK--TKDAYAGIIGKKYYSYKDEAEKIFINISKLANSINIQIQNNsgidlfd 1921
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1423 ----DILKSNNTNMETDLTRLKNRLKSAE----------DALKELKNSLSHAKTEKERLQNAFR-----EKTKQADHLNQ 1483
Cdd:TIGR01612 1922 niniAILSSLDSEKEDTLKFIPSPEKEPEiytkirdsydTLLDIFKKSQDLHKKEQDTLNIIFEnqqlyEKIQASNELKD 2001
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1484 LASQFDTKLTKLRNELQdtndKLITSDTERNALRNELQKLSQELKFGN-EQIQRKSDEYQTTIDDLAHSHRVS--EDSRL 1560
Cdd:TIGR01612 2002 TLSDLKYKKEKILNDVK----LLLHKFDELNKLSCDSQNYDTILELSKqDKIKEKIDNYEKEKEKFGIDFDVKamEEKFD 2077
|
1050 1060 1070
....*....|....*....|....*....|....
gi 1845979720 1561 NALQELEarKYEINDLTSRL---DSTEQRLATLQ 1591
Cdd:TIGR01612 2078 NDIKDIE--KFENNYKHSEKdnhDFSEEKDNIIQ 2109
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
517-1536 |
7.67e-11 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 67.89 E-value: 7.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 517 ELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRN---REKLN----EAQGALKKLHE---MAQDSEKNVDGTV 586
Cdd:pfam01576 75 EILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEeaaRQKLQlekvTTEAKIKKLEEdilLLEDQNSKLSKER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 587 SIKRTRsLSPGKTPLPPSEALRAVRNTFRNK-DNDIQQLERKLKIAESQVKEFlnkfenaDEARRRLDKQFADAKREISN 665
Cdd:pfam01576 155 KLLEER-ISEFTSNLAEEEEKAKSLSKLKNKhEAMISDLEERLKKEEKGRQEL-------EKAKRKLEGESTDLQEQIAE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 666 LQKSVDEAERNSRRTDDKLRA-------SEAERVAAEKARKFLEDELAKLQASF--QKSSTDDARKLRDEMDEHTNSIQE 736
Cdd:pfam01576 227 LQAQIAELRAQLAKKEEELQAalarleeETAQKNNALKKIRELEAQISELQEDLesERAARNKAEKQRRDLGEELEALKT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 737 EFKTRID------ELNRRVENLLRENNR-LKSEVNPLKDKYRDLENEYNSTqrrIEEKETQIRYSDDIRRNIQKDLDDLR 809
Cdd:pfam01576 307 ELEDTLDttaaqqELRSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQA---LEELTEQLEQAKRNKANLEKAKQALE 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 810 EKYDRVHTDNEKILG---ELEHAQKAahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNN 886
Cdd:pfam01576 384 SENAELQAELRTLQQakqDSEHKRKK---LEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 887 DELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGD- 965
Cdd:pfam01576 461 KDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEE---EEEAKRNVERQLSTLQAQLSDMKKKLEEDa 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 966 --VQALKETIRKLENELEKLRNENKElvgkearaRDAANQQLSRA-NLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKER 1042
Cdd:pfam01576 538 gtLEALEEGKKRLQRELEALTQQLEE--------KAAAYDKLEKTkNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQM 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1043 LANigkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaAEDIESRGGGEIDipssgdvihgRDGRDGRDAG 1122
Cdd:pfam01576 610 LAE--------------------------------------------EKAISARYAEERD----------RAEAEAREKE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1123 NRG---THTITNTKERIERIEK-NILDRYHDDELVEHKirevNDRWK--RELER----LENEKDDLERRIRELEDELSQI 1192
Cdd:pfam01576 636 TRAlslARALEEALEAKEELERtNKQLRAEMEDLVSSK----DDVGKnvHELERskraLEQQVEEMKTQLEELEDELQAT 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1193 GRGNDKTENDITELKRKHAAEI--------DKLKSDISALHDkHLSDLDDEKEQYGKAVENLKSVEDDLRDklnnLEKQL 1264
Cdd:pfam01576 712 EDAKLRLEVNMQALKAQFERDLqardeqgeEKRRQLVKQVRE-LEAELEDERKQRAQAVAAKKKLELDLKE----LEAQI 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1265 -ADSLNRENELEREKRdydekinsLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS-EAKAL---ETTNTALKAQLQ 1339
Cdd:pfam01576 787 dAANKGREEAVKQLKK--------LQAQMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLqlqEDLAASERARRQ 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1340 AANDRiDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ-------SDANKWR 1412
Cdd:pfam01576 859 AQQER-DELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTtelaaerSTSQKSE 937
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1413 GELDAALRENDILKSNNTNME-TDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTK-------QADHLNQL 1484
Cdd:pfam01576 938 SARQQLERQNKELKAKLQEMEgTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKklkevllQVEDERRH 1017
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1485 ASQFDTKLTKLRNELQDTNDKLITSDTER---NALRNELQKLSQELKFGNEQIQR 1536
Cdd:pfam01576 1018 ADQYKDQAEKGNSRMKQLKRQLEEAEEEAsraNAARRKLQRELDDATESNESMNR 1072
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
721-1540 |
7.73e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 68.07 E-value: 7.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 721 RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRI---EEKETQirySDDI 797
Cdd:pfam02463 197 LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIekeEEKLAQ---VLKE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 798 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRddyQKQKDEHARHLFDIRHKLETEIKGRQD 877
Cdd:pfam02463 274 NKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEK---KKAEKELKKEKEEIEELEKELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 878 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 957
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 958 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTdVNKQLEQDIR 1037
Cdd:pfam02463 431 ILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERS-QKESKARSGL 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1038 DLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADpsRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDgRD 1117
Cdd:pfam02463 510 KVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAI--STAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI-PK 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1118 GRDAGNRGTHTITNTKERIERIEKNILDRyhDDELVEHKIREVNDRWKRELERLENEKdDLERRIRELEDELSQIGRGND 1197
Cdd:pfam02463 587 LKLPLKSIAVLEIDPILNLAQLDKATLEA--DEDDKRAKVVEGILKDTELTKLKESAK-AKESGLRKGVSLEEGLAEKSE 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1198 KTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELERE 1277
Cdd:pfam02463 664 VKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQ 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1278 KRD-----YDEKIN-SLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANdridhltkt 1351
Cdd:pfam02463 744 KIDeeeeeEEKSRLkKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA--------- 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1352 vndhtskvrdltsqvrhLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENdilksnntn 1431
Cdd:pfam02463 815 -----------------ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEEL--------- 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1432 metdltRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDT 1511
Cdd:pfam02463 869 ------LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*....
gi 1845979720 1512 ERNALRNELQKLSQELKFGNEQIQRKSDE 1540
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1129-1601 |
8.93e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.78 E-value: 8.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNIldryHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGN---DKTENDITE 1205
Cdd:PRK03918 171 IKEIKRRIERLEKFI----KRTENIEELIKEK----EKELEEVLREINEISSELPELREELEKLEKEVkelEELKEEIEE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1206 LKRKHAA---EIDKLKSDISALHD------KHLSDLDD------EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR 1270
Cdd:PRK03918 243 LEKELESlegSKRKLEEKIRELEErieelkKEIEELEEkvkelkELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1271 ENELEREKRDYDEK---INSLYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEAKALETTNtaLKAQLQAANDRI 1345
Cdd:PRK03918 323 INGIEERIKELEEKeerLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEK--LEKELEELEKAK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1346 DHLTKTVNDHTSKVRDLTSQVRHLED---ELADTKGN--LVQKEMDLEstqNRLRSLEDQHSTLqSDANKWRGELDAALR 1420
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEIKELKKaieELKKAKGKcpVCGRELTEE---HRKELLEEYTAEL-KRIEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1421 EndiLKSNNTNMETDLTRLKN--RLKSAEDALKELKNSLShaKTEKERLQNAFREKTKQADHLNQLASQFDT------KL 1492
Cdd:PRK03918 477 K---LRKELRELEKVLKKESEliKLKELAEQLKELEEKLK--KYNLEELEKKAEEYEKLKEKLIKLKGEIKSlkkeleKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1493 TKLRNELQDTNDKLITSDTERNALRNELQKLSQE-LKFGNEQIQRKSDEYQTTID--DLAHSHRVSEDSRLNALQELEAR 1569
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGFEsVEELEERLKELEPFYNEYLElkDAEKELEREEKELKKLEEELDKA 631
|
490 500 510
....*....|....*....|....*....|..
gi 1845979720 1570 KYEINDLTSRLDSTEQRLATLQQDYIKADSER 1601
Cdd:PRK03918 632 FEELAETEKRLEELRKELEELEKKYSEEEYEE 663
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1811-2216 |
1.00e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.35 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1811 KTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETK 1890
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLK-------KNKDK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1891 MRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIdiqSKTSHE 1970
Cdd:TIGR04523 98 INKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQK---EELENE 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1971 YQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---RVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 2047
Cdd:TIGR04523 175 LNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSlesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2048 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITLL----KKIELLENEKRRTD 2122
Cdd:TIGR04523 255 LNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlNNQKEQDWNKELKSELknqeKKLEEIQNQISQNN 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2123 AAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVI 2200
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNleSQINDLESKIQNQEKLNQQKDEQI 414
|
410
....*....|....*.
gi 1845979720 2201 ENRERTHRNRIKQLED 2216
Cdd:TIGR04523 415 KKLQQEKELLEKEIER 430
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1133-1433 |
1.24e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1133 KERIERIEKNIldRYHDDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK---RK 1209
Cdd:COG1196 219 KEELKELEAEL--LLLKLRELEAELEEL----EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeeYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1210 HAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLY 1289
Cdd:COG1196 293 LLAELARLEQDIARLEER-RRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1290 GQNQKIKDEWDDFRNDADKEIQkwktdaytvrsEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHL 1369
Cdd:COG1196 372 AELAEAEEELEELAEELLEALR-----------AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 1370 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNME 1433
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYE 504
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1324-1528 |
1.34e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.94 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1324 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHST 1403
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1404 LQSDANKWRGELDAALRE----------NDILKSNNTN--------METDLTRLKNRLKSAEDALKELKNSLSHAKTEKE 1465
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyrlgrqpplALLLSPEDFLdavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1466 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELK 1528
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1133-1964 |
1.36e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.07 E-value: 1.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1133 KERIERIekniLDRY-HDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELE---DELSQIGRGNDKTENDITELKR 1208
Cdd:pfam15921 73 KEHIERV----LEEYsHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQmerDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1209 KHAAEIDKLKSdisaLHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdyDEKINSL 1288
Cdd:pfam15921 149 NTVHELEAAKC----LKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMS------TMHFRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1289 YGQNQKIKDEwddfrndADKEIQKWKTDAYTVRSEAKALET-TNTALKAQLQAANDRIDHL-----------TKTVNDHT 1356
Cdd:pfam15921 219 GSAISKILRE-------LDTEISYLKGRIFPVEDQLEALKSeSQNKIELLLQQHQDRIEQLiseheveitglTEKASSAR 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1357 SKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRS--------LEDQHSTLQSDANKWRGELDAALRENDILKSN 1428
Cdd:pfam15921 292 SQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSelreakrmYEDKIEELEKQLVLANSELTEARTERDQFSQE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1429 NTNMETDLTRLKNRLKSAEdalkelkNSLSHAKTEKERLQNAFREKTKQADHL-------NQLASQFDTKLTKLRNELQD 1501
Cdd:pfam15921 372 SGNLDDQLQKLLADLHKRE-------KELSLEKEQNKRLWDRDTGNSITIDHLrrelddrNMEVQRLEALLKAMKSECQG 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1502 TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDsRLNALQE----LEARKYEINDLT 1577
Cdd:pfam15921 445 QMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSD-LTASLQEkeraIEATNAEITKLR 523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1578 SRLDSTEQRLATLQQDyikADSERDILS--DALRRFQSSANRVINFhtfvdggagYVDGVPGGTSVIggGPSAQRSGAYD 1655
Cdd:pfam15921 524 SRVDLKLQELQHLKNE---GDHLRNVQTecEALKLQMAEKDKVIEI---------LRQQIENMTQLV--GQHGRTAGAMQ 589
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1656 PSSGGVIGSGISGGPGGSDFgrEIEIGRGDSDQSDVAYPRSvpfppsaDFSSGRPGAASAGGRVINNldgtttvnmnggf 1735
Cdd:pfam15921 590 VEKAQLEKEINDRRLELQEF--KILKDKKDAKIRELEARVS-------DLELEKVKLVNAGSERLRA------------- 647
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 dIANLEGTLQSLLNKIEKLEMERNELRDtlarmkkkttethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1815
Cdd:pfam15921 648 -VKDIKQERDQLLNEVKTSRNELNSLSE-----------------DYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1816 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfQLETKMRESD 1895
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKN-------KLSQELSTVA 782
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1896 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrrdlTKAESVENELRKTIDIQ 1964
Cdd:pfam15921 783 TEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQR-----QEQESVRLKLQHTLDVK 846
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1741-2226 |
1.62e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.58 E-value: 1.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1741 EGTLQSLLNKIEKLEMERNELRDTLarmkkktTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1820
Cdd:TIGR04523 67 EEKINNSNNKIKILEQQIKDLNDKL-------KKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1821 LKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKmresDSDTNK 1900
Cdd:TIGR04523 140 IDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1901 YQLQIASFESERQILTEKIKELdgalrlsdskvqdmkddTDKLRRDLTKAESVENELRKTIDIQSKTsheyqllKDQLLN 1980
Cdd:TIGR04523 216 LESQISELKKQNNQLKDNIEKK-----------------QQEINEKTTEISNTQTQLNQLKDEQNKI-------KKQLSE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1981 TQNELNGANNRKQQLENELLNVRSEVRDYKQR------------VHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVV 2048
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQkeqdwnkelkseLKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKEL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2049 NTMRTTETDLRQQL-------ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLS-------DGWKKEKITLLKKIELL 2114
Cdd:TIGR04523 352 TNSESENSEKQRELeekqneiEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNqqkdeqiKKLQQEKELLEKEIERL 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2115 ENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNcaqlqQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKG 2194
Cdd:TIGR04523 432 KETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ-----LKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKK 506
|
490 500 510
....*....|....*....|....*....|....*
gi 1845979720 2195 QIE---KVIENRERTHRNRIKQLEDQIAILRDQLD 2226
Cdd:TIGR04523 507 ELEekvKDLTKKISSLKEKIEKLESEKKEKESKIS 541
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
500-981 |
2.03e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.63 E-value: 2.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 500 LEELRKIRGGGSS-EGDAELHKELMTKYEESIE--RNIE-----LESRGDDSQRKIAELEAELRRNREKLNEAQGALKKL 571
Cdd:PRK03918 275 IEELEEKVKELKElKEKAEEYIKLSEFYEEYLDelREIEkrlsrLEEEINGIEERIKELEEKEERLEELKKKLKELEKRL 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 572 HEMAQDSEKNVDGTVSIKRTRSLSPGKTPLPPSEalravrntfrnkdndiqqLERKLKIAESQVKEFLNKFENADEARRR 651
Cdd:PRK03918 355 EELEERHELYEEAKAKKEELERLKKRLTGLTPEK------------------LEKELEELEKAKEEIEEEISKITARIGE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 652 LDKQFADAKREISNLQKS----------VDEAERNS--RRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD 719
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAkgkcpvcgreLTEEHRKEllEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 A-RKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEnEYNSTQRRIEEKEtqirysDDIR 798
Cdd:PRK03918 497 KlKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAELEKKL------DELE 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 799 RNIQKDLDDLREKYDRVHTDNEKILGELE-------HAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRhKLETE 871
Cdd:PRK03918 570 EELAELLKELEELGFESVEELEERLKELEpfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLE-ELRKE 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 872 IK--GRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgkitHLENELHSRSGEIEKLNDLNQRLQ 949
Cdd:PRK03918 649 LEelEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE-------KLKEELEEREKAKKELEKLEKALE 721
|
490 500 510
....*....|....*....|....*....|..
gi 1845979720 950 kekqdilnqklkldgDVQALKETIRKLENELE 981
Cdd:PRK03918 722 ---------------RVEELREKVKKYKALLK 738
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1167-1619 |
3.02e-10 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 65.48 E-value: 3.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRELEDELSQigrgndktendITELKRKHAAEIDKLKSDISALHD---------KHLSDLDDEKE 1237
Cdd:pfam05622 1 DLSEAQEEKDELAQRCHELDQQVSL-----------LQEEKNSLQQENKKLQERLDQLESgddsgtpggKKYLLLQKQLE 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1238 QYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELErekrdydekinSLYGQNQKIKDEWDDFRNDADKeIQKWKTda 1317
Cdd:pfam05622 70 QLQEENFRLETARDDYRIKCEELEKEVLELQHRNEELT-----------SLAEEAQALKDEMDILRESSDK-VKKLEA-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1318 yTVRSEAKALETTNTaLKAQLQAANDR-IDHLTKTVN--DHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRL 1394
Cdd:pfam05622 136 -TVETYKKKLEDLGD-LRRQVKLLEERnAEYMQRTLQleEELKKANALRGQLETYKRQVQELHGKLSEESKKADKLEFEY 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1395 RSLEDQHSTLQSDANKWRGELDaALREndilksnnTNMETDLTRLKNRLKSAEDALKElKNSLSHAKTEKERLQNAFREK 1474
Cdd:pfam05622 214 KKLEEKLEALQKEKERLIIERD-TLRE--------TNEELRCAQLQQAELSQADALLS-PSSDPGDNLAAEIMPAEIREK 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1475 TKQADHLNQL-----ASQFDTKLTKLRNELQDTNDKLITSDTErnaLRNELQKLSqELKFGNEQIQRKSDEYQTTIDDLA 1549
Cdd:pfam05622 284 LIRLQHENKMlrlgqEGSYRERLTELQQLLEDANRRKNELETQ---NRLANQRIL-ELQQQVEELQKALQEQGSKAEDSS 359
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 1550 HSHRVSE---DSRLNALQELEARKYEINDLTSRLDS-TEQRLATLQQDYIKADSERDILSDALRRFQSSANRVI 1619
Cdd:pfam05622 360 LLKQKLEehlEKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKDEDMKAMEERYKKYVEKAKSVI 433
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
607-1046 |
5.90e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.06 E-value: 5.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 607 LRAVRNTFRNKDNDIQQLERK--------LKIAESQVKEFLNKFE-NADEARRRLDK-------------QFADAKREIS 664
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKdlherlngLESELAELDEEIERYEeQREQARETRDEadevleeheerreELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 665 NLQKSVDEAERnsRRTDDKLRASEAERVAAEkarkfLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQ---EEFK 739
Cdd:PRK02224 262 DLRETIAETER--EREELAEEVRDLRERLEE-----LEEERDDLLAEagLDDADAEAVEARREELEDRDEELRdrlEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 740 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIR--------------YSDDIRRNIQKDL 805
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEeleeeieelrerfgDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 806 DDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR--------------DDYQKQKDEHARHLFDIR---HKL 868
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEALLEAGKCPEcgqpvegsphvetiEEDRERVEELEAELEDLEeevEEV 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 869 ETEI----------KGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKIThlenELHSRSGEI 938
Cdd:PRK02224 495 EERLeraedlveaeDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAA----EAEEEAEEA 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 939 -EKLNDLNQRLQ--KEKQDILNqklkldgDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE- 1014
Cdd:PRK02224 571 rEEVAELNSKLAelKERIESLE-------RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEf 643
|
490 500 510
....*....|....*....|....*....|....*.
gi 1845979720 1015 ----LEDTKQDLKHSTDVNKQLEQDIRDLKERLANI 1046
Cdd:PRK02224 644 dearIEEAREDKERAEEYLEQVEEKLDELREERDDL 679
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1741-2146 |
5.97e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 64.79 E-value: 5.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1741 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKET--RYRNIEDNLQDAEEERRALESRLQSAKTLLRSQE 1818
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1819 EALKQRDEERRQMKSKMVAAELQargKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1898
Cdd:COG4717 167 ELEAELAELQEELEELLEQLSLA---TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1899 NKYQLQ--------IASFESERQILTEKIKELDGAL---------------RLSDSKVQDMKDDTDKLRRDLTKAESVEN 1955
Cdd:COG4717 244 RLKEARlllliaaaLLALLGLGGSLLSLILTIAGVLflvlgllallflllaREKASLGKEAEELQALPALEELEEEELEE 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1956 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE--------NELLN---------VRSEVRDYKQRvHDVNN 2018
Cdd:COG4717 324 LLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqeiAALLAeagvedeeeLRAALEQAEEY-QELKE 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2019 RVSELQRQLQDANTEKNRVEDRFlsvekvvntmrtTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRnssQLSD 2098
Cdd:COG4717 403 ELEELEEQLEELLGELEELLEAL------------DEEELEEELEELEEELEELEEELEELREELAELEAELE---QLEE 467
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1845979720 2099 GWKKEKitLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREN 2146
Cdd:COG4717 468 DGELAE--LLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
535-1048 |
6.19e-10 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 64.92 E-value: 6.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 535 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEK-NVDGTVSIKRTRSLSPGKTPLPPSE-------- 605
Cdd:PRK01156 208 DDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRyESEIKTAESDLSMELEKNNYYKELEerhmkiin 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 606 -ALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDK---QFADAKREISNLQKSVDEAERNSRRTD 681
Cdd:PRK01156 288 dPVYKNRNYINDYFKYKNDIENKKQILSN-IDAEINKYHAIIKKLSVLQKdynDYIKKKSRYDDLNNQILELEGYEMDYN 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 682 DKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDdARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKS 761
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEID-PDAIKKELNEINVKLQD-ISSKVSSLNQRIRALRENLDELSR 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 762 EVNPLK--------------DKYRDLENEYNSTQRRIEEK----ETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIL 823
Cdd:PRK01156 445 NMEMLNgqsvcpvcgttlgeEKSNHIINHYNEKKSRLEEKireiEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKI 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 824 GELEHAQKAAhlaEQQLKEIKIQRDDYQKQKDEH-ARHLFDIRHKLETEIKGrqdlekNGARNNDELDKLRQTISDYESQ 902
Cdd:PRK01156 525 ESARADLEDI---KIKINELKDKHDKYEEIKNRYkSLKLEDLDSKRTSWLNA------LAVISLIDIETNRSRSNEIKKQ 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 903 INLLRRHNDELDTTIKghqgkithlenelhsrsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 982
Cdd:PRK01156 596 LNDLESRLQEIEIGFP------------------DDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKK 657
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 983 LRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1048
Cdd:PRK01156 658 QIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINE 723
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
540-808 |
8.55e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.55 E-value: 8.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 540 GDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgtvSIKRTRSLSPGKTPLPPSEA----LRAVRNTFR 615
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERRE---ALQRLAEYSWDEIDVASAEReiaeLEAELERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 616 NKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD----DKLRASEAER 691
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELrallEERFAAALGD 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 692 VAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENL---LRENNRLKSEVNP-LK 767
Cdd:COG4913 762 AVERELRENLEERIDALRA--------RLNRAEEELERAMRAFNREWPAETADLDADLESLpeyLALLDRLEEDGLPeYE 833
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1845979720 768 DKYRDLENEynSTQRRIEEKETQIRYSddiRRNIQKDLDDL 808
Cdd:COG4913 834 ERFKELLNE--NSIEFVADLLSKLRRA---IREIKERIDPL 869
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1736-2225 |
9.02e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 9.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEME-------RNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1808
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQkqilrerLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1809 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfqlE 1888
Cdd:TIGR02168 362 ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE---------E 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1889 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKtidiqskts 1968
Cdd:TIGR02168 433 AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG--------- 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1969 heYQLLKDQLLNTQNELNGANNRKQQL-------ENELLNVRSEVRDY---------KQRV-HDVNNRV---------SE 2022
Cdd:TIGR02168 504 --FSEGVKALLKNQSGLSGILGVLSELisvdegyEAAIEAALGGRLQAvvvenlnaaKKAIaFLKQNELgrvtflpldSI 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2023 LQRQLQDANTEKNRVEDRFLSV-----------EKVVNTMRTT---ETDLRQQLETAKNEK---RVATKELEDLKRRLAQ 2085
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGVakdlvkfdpklRKALSYLLGGvlvVDDLDNALELAKKLRpgyRIVTLDGDLVRPGGVI 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2086 L-ENERRNSSQLSDgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE-------KSLNAMERENKELYKNCAQLQ 2157
Cdd:TIGR02168 662 TgGSAKTNSSILER--RREIEELEEKIEELEEKIAELEKALAELRKELEELEeeleqlrKELEELSRQISALRKDLARLE 739
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2158 QQIAQLEMENGNRILELTN--KQREEQERQLIRMRQEKGQIEKVIENRER---THRNRIKQLEDQIAILRDQL 2225
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTEleAEIEELEERLEEAEEELAEAEAEIEELEAqieQLKEELKALREALDELRAEL 812
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
619-833 |
9.17e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 63.24 E-value: 9.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKAR 698
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 699 KFLEDELAKLQASFQKSSTDDARKLR---------DEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDK 769
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLlspedfldaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 770 YRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAA 833
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1803-2225 |
1.34e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 63.91 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1803 LESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRslrDKEEQWDS 1882
Cdd:TIGR00606 700 LQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIE---EQETLLGT 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1883 SRFQLETKMRESDSDTNKYQLQIASFESERQIlTEKIKELDGA-LRLSDSKVQDMKDDTD-KLRRDLTKAEsvenELRKT 1960
Cdd:TIGR00606 777 IMPEEESAKVCLTDVTIMERFQMELKDVERKI-AQQAAKLQGSdLDRTVQQVNQEKQEKQhELDTVVSKIE----LNRKL 851
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1961 IDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvedr 2040
Cdd:TIGR00606 852 IQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEK------ 925
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2041 flsvEKVVNTMRTtetdlrqqletaknEKRVATKELEDLKRRLAQLENERRN-SSQLSDGWKKEKITllkkielLENEKR 2119
Cdd:TIGR00606 926 ----EELISSKET--------------SNKKAQDKVNDIKEKVKNIHGYMKDiENKIQDGKDDYLKQ-------KETELN 980
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2120 RTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQ--ERQLIRMRQEKGQIE 2197
Cdd:TIGR00606 981 TVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEmgQMQVLQMKQEHQKLE 1060
|
410 420 430
....*....|....*....|....*....|.
gi 1845979720 2198 KVIENRERTHR---NRIKQLEDQIAILRDQL 2225
Cdd:TIGR00606 1061 ENIDLIKRNHVlalGRQKGYEKEIKHFKKEL 1091
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
516-1593 |
1.80e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 63.53 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 516 AELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLS 595
Cdd:TIGR01612 747 GEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIK 826
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 596 PGKTPLPPSEaLRAVRNTFRNKDNDIQQLE----RKLKIAESQVKEFLNKFEN--ADEARRRLDKQFADAKREISNLQKS 669
Cdd:TIGR01612 827 EDEIFKIINE-MKFMKDDFLNKVDKFINFEnnckEKIDSEHEQFAELTNKIKAeiSDDKLNDYEKKFNDSKSLINEINKS 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 670 VDEAERNS---RRTDDKLRASEAERVAAEKarkfledelaklqasFQKSSTDDARKLRDEMD--EHTNSIQEEFKTRIDe 744
Cdd:TIGR01612 906 IEEEYQNIntlKKVDEYIKICENTKESIEK---------------FHNKQNILKEILNKNIDtiKESNLIEKSYKDKFD- 969
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 745 lnrrvenllrenNRLKSEVNPLKDKYRDLE-NEYNSTQRRIeeketqIRYSDDIRRNIQKDLDD-LREKYDrvhtDNEKI 822
Cdd:TIGR01612 970 ------------NTLIDKINELDKAFKDASlNDYEAKNNEL------IKYFNDLKANLGKNKENmLYHQFD----EKEKA 1027
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 823 LGELEhaqkaahlaeqqlkeikiqrddyqkQKDEHA-RHLFDIRHKLETEIKG-RQDLEKNGARNNDELDKlrqtisdye 900
Cdd:TIGR01612 1028 TNDIE-------------------------QKIEDAnKNIPNIEIAIHTSIYNiIDEIEKEIGKNIELLNK--------- 1073
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 sqiNLLRRHNDELdTTIKGHQGKITHLENELHSRSGEIEKLNDLNqrlqKEKQDILNQKLKLDGDVQALKETIRKLENEL 980
Cdd:TIGR01612 1074 ---EILEEAEINI-TNFNEIKEKLKHYNFDDFGKEENIKYADEIN----KIKDDIKNLDQKIDHHIKALEEIKKKSENYI 1145
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 981 EKLRNENKELvgkearaRDAANQQLSRANLlnKELEDTKQDLKHSTDVNKQLEQDIRDLKERLAnigkggRISRDSTTgt 1060
Cdd:TIGR01612 1146 DEIKAQINDL-------EDVADKAISNDDP--EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIA------EIEKDKTS-- 1208
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1061 dggafgdRSSVADPSRTRGAAGSTVFVPAAEdiESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTItntkERIERIE 1140
Cdd:TIGR01612 1209 -------LEEVKGINLSYGKNLGKLFLEKID--EEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGI----EMDIKAE 1275
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1141 KNILDRYHDDELVEHKIREVNDrwkrelerlENEKDDLERRIRELED--ELSQIGRGNDKTENDITElKRKHAAEIDKLK 1218
Cdd:TIGR01612 1276 METFNISHDDDKDHHIISKKHD---------ENISDIREKSLKIIEDfsEESDINDIKKELQKNLLD-AQKHNSDINLYL 1345
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1219 SDISALHD----KHLSDLDDEKEQYGKAVE-NLKSVEDDLrDKLNNLEKQLADSLNreneLEREKrdydekinslygqnQ 1293
Cdd:TIGR01612 1346 NEIANIYNilklNKIKKIIDEVKEYTKEIEeNNKNIKDEL-DKSEKLIKKIKDDIN----LEECK--------------S 1406
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1294 KIKDEWDDfrNDADKEIQKWKTDAYTVRSEakalETTNTALKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhledEL 1373
Cdd:TIGR01612 1407 KIESTLDD--KDIDECIKKIKELKNHILSE----ESNIDTYFKNADENNENVLLLFKNI-------------------EM 1461
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1374 ADTKGNLVQKEM------DLESTQNRLRSLEDQHSTLQSDANKWRgeldAALRENDILKSnntNMETDLTRLKNRLKSAe 1447
Cdd:TIGR01612 1462 ADNKSQHILKIKkdnatnDHDFNINELKEHIDKSKGCKDEADKNA----KAIEKNKELFE---QYKKDVTELLNKYSAL- 1533
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1448 dalkELKNSLSHAKTEKERLQNAFREKTKQadhLNQLASQFDTKLTKLRNE---LQD-------TNDKLITSDTERNALR 1517
Cdd:TIGR01612 1534 ----AIKNKFAKTKKDSEIIIKEIKDAHKK---FILEAEKSEQKIKEIKKEkfrIEDdaakndkSNKAAIDIQLSLENFE 1606
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1518 NELQKLSQELKFGN------EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNA-LQELEARKYEINDLTSRLDSTEQRLATL 1590
Cdd:TIGR01612 1607 NKFLKISDIKKKINdclketESIEKKISSFSIDSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKELDELDSEIEKI 1686
|
...
gi 1845979720 1591 QQD 1593
Cdd:TIGR01612 1687 EID 1689
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
597-1021 |
2.00e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.86 E-value: 2.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 597 GKTPLPPSEALRAVRNTFR---NKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDK--QFADAKREISNLQKSVD 671
Cdd:COG4717 63 GRKPELNLKELKELEEELKeaeEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 672 EAERNSrrtdDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVEN 751
Cdd:COG4717 143 ELPERL----EELEERLEELRELEEELEELEAELAELQE--------ELEELLEQLSLATEEELQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 752 LLRENNRLKSEVNPLKDKYRDLENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLR 809
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 810 EKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDI-------------------RHKLET 870
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRieelqellreaeeleeelqLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 871 EIKgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG-----HQGKITHLENELHSRSGEIEKLNDLN 945
Cdd:COG4717 371 EIA--ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEleellEALDEEELEEELEELEEELEELEEEL 448
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 946 QRLQKEKQDILNQKLKLDGDvqalkETIRKLENELEKLRNENKELVgKEARARDAANQQLSRAnllNKELEDTKQD 1021
Cdd:COG4717 449 EELREELAELEAELEQLEED-----GELAELLQELEELKAELRELA-EEWAALKLALELLEEA---REEYREERLP 515
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
785-1589 |
2.16e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.01 E-value: 2.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 785 EEKETQirysDDIRRnIQKDLDDLREKYDRVHTDNEKI--LGEL-EHAQKAAHlAEQQLKEIKIQRDDYQKQKDEHARHL 861
Cdd:COG4913 219 EEPDTF----EAADA-LVEHFDDLERAHEALEDAREQIelLEPIrELAERYAA-ARERLAELEYLRAALRLWFAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 862 fdirhkLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-KITHLENELhsrsgeiek 940
Cdd:COG4913 293 ------LEAEL----------EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGdRLEQLEREI--------- 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 941 lndlnQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANllnKELEDTKQ 1020
Cdd:COG4913 348 -----ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE---AALRDLRR 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1021 DLKhstdvnkQLEQDIRDLKERLANIGKGGRISRDsttgtdggafgdrssvadpsRTRGAAGSTvfvpaaediesrgggE 1100
Cdd:COG4913 420 ELR-------ELEAEIASLERRKSNIPARLLALRD--------------------ALAEALGLD---------------E 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1101 IDIPSSGDVIHGRDG-RDGRDAGNRGTHTITNT---KERIERIEKNILDRYHDDE-LVEHKIREVNdrwkRELERLENEK 1175
Cdd:COG4913 458 AELPFVGELIEVRPEeERWRGAIERVLGGFALTllvPPEHYAAALRWVNRLHLRGrLVYERVRTGL----PDPERPRLDP 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1176 DDLERRI--------RELEDELSQigRGNDKTENDITELKR-KHAAEIDKLKSDISALHDKhlsdlDDEKEQYGKAV--- 1243
Cdd:COG4913 534 DSLAGKLdfkphpfrAWLEAELGR--RFDYVCVDSPEELRRhPRAITRAGQVKGNGTRHEK-----DDRRRIRSRYVlgf 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1244 ENlksveddlRDKLNNLEKQLAdslnrenELEREKRDYDEKINSL---YGQNQKIKDEWDDFRNDADKEIqkwktDAYTV 1320
Cdd:COG4913 607 DN--------RAKLAALEAELA-------ELEEELAEAEERLEALeaeLDALQERREALQRLAEYSWDEI-----DVASA 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1321 RSEAKALEttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED- 1399
Cdd:COG4913 667 EREIAELE----AELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDl 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1400 QHSTLQSDANKWRGELDAALRENDILKsnntNMETDLTRLKNRLKSAEDALkelknslshaktekERLQNAFREKTK--Q 1477
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRE----NLEERIDALRARLNRAEEEL--------------ERAMRAFNREWPaeT 804
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1478 ADHLNQLAS--QFDTKLTKLRNE------------LQDTNDKLITS-----DTERNALRNELQKLSQELK---FGNE--- 1532
Cdd:COG4913 805 ADLDADLESlpEYLALLDRLEEDglpeyeerfkelLNENSIEFVADllsklRRAIREIKERIDPLNDSLKripFGPGryl 884
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1533 QI---QRKSDEYQTTIDDLahsHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLAT 1589
Cdd:COG4913 885 RLearPRPDPEVREFRQEL---RAVTSGASLFDEELSEARFAALKRLIERLRSEEEESDR 941
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1748-2224 |
2.56e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 62.73 E-value: 2.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1748 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSaktllrsqeeaLKQRDEE 1827
Cdd:TIGR04523 144 LTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN-----------LKKKIQK 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1828 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQwdsSRFQLETKMRESDSDTNKyqlqIAS 1907
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNK---IKKQLSEKQKELEQNNKK----IKE 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1908 FESERQILTEKIKELDgalrlsDSKVQD-MKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1986
Cdd:TIGR04523 286 LEKQLNQLKSEISDLN------NQKEQDwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENS 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1987 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQ-----------------------------------DAN 2031
Cdd:TIGR04523 360 EKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQnqeklnqqkdeqikklqqekellekeierlketiiKNN 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2032 TEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ-------LENERRNSSQLSDGWKKEK 2104
Cdd:TIGR04523 440 SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSkekelkkLNEEKKELEEKVKDLTKKI 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2105 ITLLKKIELLENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQER 2184
Cdd:TIGR04523 520 SSLKEKIEKLESEKKEKESKISD-------LEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1845979720 2185 QLirmRQEKGQIEKVIENRERThrnrIKQLEDQIAILRDQ 2224
Cdd:TIGR04523 593 QK---EKEKKDLIKEIEEKEKK----ISSLEKELEKAKKE 625
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1156-1614 |
2.79e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.48 E-value: 2.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1156 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRkhaaEIDKLKSDISALHD-KHLSDLDD 1234
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE----ELEKLEKLLQLLPLyQELEALEA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1235 EKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1314
Cdd:COG4717 140 ELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1315 TDAYTVRSEAKALETtntalKAQLQAANDRIDHLTKTVNDhTSKVRDLTSQVRHLEDELADTKG--------------NL 1380
Cdd:COG4717 220 EELEELEEELEQLEN-----ELEAAALEERLKEARLLLLI-AAALLALLGLGGSLLSLILTIAGvlflvlgllallflLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1381 VQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAalrENDILKSNNTNMETDLTRLKNRLKSAEDALKELKnsLSHA 1460
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGL---PPDLSPEELLELLDRIEELQELLREAEELEEELQ--LEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1461 KTEKERLQN--------AFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERnaLRNELQKLSQELKFGNE 1532
Cdd:COG4717 369 EQEIAALLAeagvedeeELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEE--LEEELEELEEELEELEE 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1533 QIQRKSDEYQTT---IDDLAHSHRVSEdsrlnALQELEARKyeindltsrldsteQRLATLQQDYIKADSERDILSDALR 1609
Cdd:COG4717 447 ELEELREELAELeaeLEQLEEDGELAE-----LLQELEELK--------------AELRELAEEWAALKLALELLEEARE 507
|
....*
gi 1845979720 1610 RFQSS 1614
Cdd:COG4717 508 EYREE 512
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1781-2145 |
3.29e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 62.09 E-value: 3.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1781 QKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKskmvaaelqargKEAQLRHLNEQLKNLR 1860
Cdd:COG4717 85 EKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA------------LEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1861 TDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDT 1940
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLAT---EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1941 DKLRRDLTKAEsVENELRK-------------------------------------------TIDIQSKTSHEYQLLKDQ 1977
Cdd:COG4717 230 EQLENELEAAA-LEERLKEarlllliaaallallglggsllsliltiagvlflvlgllallfLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1978 LLNTQNELNGA--NNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVE-DRFLSVEKVvntmrTT 2054
Cdd:COG4717 309 ALPALEELEEEelEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEiAALLAEAGV-----ED 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2055 ETDLRQQLEtAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD--GWKKEKITLLKKIELLENEKRRTDAAIRETALQR 2132
Cdd:COG4717 384 EEELRAALE-QAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAEL 462
|
410
....*....|...
gi 1845979720 2133 EAIEKSLNAMERE 2145
Cdd:COG4717 463 EQLEEDGELAELL 475
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
679-1564 |
3.79e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.50 E-value: 3.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 679 RTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD---ARKLRDEMDEHTNSiqEEFKTRIDELNRRVENLLRE 755
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKnalQEQLQAETELCAEA--EEMRARLAARKQELEEILHE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 756 nnrLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD-------NEKILGELEH 828
Cdd:pfam01576 80 ---LESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDillledqNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 829 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLR- 907
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRa 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 908 ---RHNDELdttikghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELE 981
Cdd:pfam01576 237 qlaKKEEEL-------QAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAarnKAEKQRRDLGEELEALKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 982 ----------KLRNENKELVG-------KEARARDAANQQLSRA-----NLLNKELEDTKQDlKHSTDVNKQ-LEQDIRD 1038
Cdd:pfam01576 310 dtldttaaqqELRSKREQEVTelkkaleEETRSHEAQLQEMRQKhtqalEELTEQLEQAKRN-KANLEKAKQaLESENAE 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1039 LKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVfvpaaedieSRGGGEID-IPSSGDVIHGRDGRD 1117
Cdd:pfam01576 389 LQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKL---------SKLQSELEsVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1118 GRDAGNRGTHtITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENE---KDDLERRIRELEDELSQIGR 1194
Cdd:pfam01576 460 SKDVSSLESQ-LQDTQELLQEETRQKLN-------LSTRLRQLEDERNSLQEQLEEEeeaKRNVERQLSTLQAQLSDMKK 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1195 gndKTEND------ITELKRKHAAEIDKLKSDI---SALHDKhlsdLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQ-- 1263
Cdd:pfam01576 532 ---KLEEDagtleaLEEGKKRLQRELEALTQQLeekAAAYDK----LEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKqk 604
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1264 -----LADSLN----------------RENE-----LEREKRDYDEKINSLYGQNQKIKDEWDDF---RNDADKEIQKWK 1314
Cdd:pfam01576 605 kfdqmLAEEKAisaryaeerdraeaeaREKEtralsLARALEEALEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELE 684
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1315 TDAYTVRSEAKALETTNTALKAQLQAANDRidHLTKTVNDHTSKV-----------------RDLTSQVRHLEDELADTK 1377
Cdd:pfam01576 685 RSKRALEQQVEEMKTQLEELEDELQATEDA--KLRLEVNMQALKAqferdlqardeqgeekrRQLVKQVRELEAELEDER 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1378 GNLVQK-------EMDL--------------ESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRENDilkSNNTNME 1433
Cdd:pfam01576 763 KQRAQAvaakkklELDLkeleaqidaankgrEEAVKQLKKLQAQMKDLQrelEEARASRDEILAQSKESE---KKLKNLE 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1434 TDLTRLKNRLKSAEDALKelknslsHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQD-------TNDKL 1506
Cdd:pfam01576 840 AELLQLQEDLAASERARR-------QAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEeqsntelLNDRL 912
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1507 ITSDTERNALRNELQ---KLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQ 1564
Cdd:pfam01576 913 RKSTLQVEQLTTELAaerSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALE 973
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
527-1046 |
4.09e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 62.44 E-value: 4.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 527 EESIERNIELESRG-DDSQRKIAELEAELRRNREKLNEAQGALK-KLHEMAQDSeknvDGTVSIKRTRSLSPG------K 598
Cdd:pfam15921 73 KEHIERVLEEYSHQvKDLQRRLNESNELHEKQKFYLRQSVIDLQtKLQEMQMER----DAMADIRRRESQSQEdlrnqlQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 599 TPLPPSEALRAVR-NTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFADAKREISNLQKSVDEAern 676
Cdd:pfam15921 149 NTVHELEAAKCLKeDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASgKKIYEHDSMSTMHFRSLGSAISKI--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 677 srrtddkLRASEAErVAAEKARKF-LEDELAKLQASFQ-------KSSTDDARKLRDEMD--------------EHTNSI 734
Cdd:pfam15921 226 -------LRELDTE-ISYLKGRIFpVEDQLEALKSESQnkielllQQHQDRIEQLISEHEveitgltekassarSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 735 QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYnstQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDR 814
Cdd:pfam15921 298 QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMY---EDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 815 VHTDNEKILGELEHAQKAAHLAEQQLKEIkIQRDDYQKQKDEHARHLFDIRH-----------KLETEIKGRQDLEKNGA 883
Cdd:pfam15921 375 LDDQLQKLLADLHKREKELSLEKEQNKRL-WDRDTGNSITIDHLRRELDDRNmevqrleallkAMKSECQGQMERQMAAI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 884 R-NNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLN----DLNQRLQKEKQDI 955
Cdd:pfam15921 454 QgKNESLEKVSSLTAQLESTKEMLRKVVEELTAkkmTLESSERTVSDLTASLQEKERAIEATNaeitKLRSRVDLKLQEL 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 956 lnQKLKLDGD--------VQALKETIRKLENELEKLRN--EN-KELVGKEARArdAANQQLSRANLlNKELEDTKQDLKH 1024
Cdd:pfam15921 534 --QHLKNEGDhlrnvqteCEALKLQMAEKDKVIEILRQqiENmTQLVGQHGRT--AGAMQVEKAQL-EKEINDRRLELQE 608
|
570 580
....*....|....*....|..
gi 1845979720 1025 STDVNKQLEQDIRDLKERLANI 1046
Cdd:pfam15921 609 FKILKDKKDAKIRELEARVSDL 630
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
619-1046 |
4.24e-09 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 61.79 E-value: 4.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 698
Cdd:pfam06160 86 KALDEIEELLDDIEEDIKQILEELDELLESEEKNREEVEELKDKYRELRKTL-----------------LANRFSYGPAI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 699 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNSIQEEFKtRIDELNRRVENLlrennrLKSEVNPLKDKYR 771
Cdd:pfam06160 149 DELEKQLAEIEEEFSQFEEltesgdyLEAREVLEKLEEETDALEELME-DIPPLYEELKTE------LPDQLEELKEGYR 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 772 DLENE-YNSTQRRIEEKETQIRysDDIRRNIQK----DLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQ 846
Cdd:pfam06160 222 EMEEEgYALEHLNVDKEIQQLE--EQLEENLALlenlELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 847 RDDYQKQKDEharhlfdirhkLETEIkgrQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITH 926
Cdd:pfam06160 300 LEHAEEQNKE-----------LKEEL---ERVQQSYTLNENELERVRG----LEKQLEELEKRYDEIVERLEEKEVAYSE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 927 LENELhsrsgeIEKLNDLNQrLQKEKQDILNQKLKLDGDVQALKETIRKLENELE--KLRNENKELVGKEARARDAANQQ 1004
Cdd:pfam06160 362 LQEEL------EEILEQLEE-IEEEQEEFKESLQSLRKDELEAREKLDEFKLELReiKRLVEKSNLPGLPESYLDYFFDV 434
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1845979720 1005 LSRANLLNKELEDTKQDLKhstDVNKQLE---QDIRDLKERLANI 1046
Cdd:pfam06160 435 SDEIEDLADELNEVPLNMD---EVNRLLDeaqDDVDTLYEKTEEL 476
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
619-1042 |
5.23e-09 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 61.39 E-value: 5.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 NDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVdeaernsrrtddklrasEAERVAAEKAR 698
Cdd:PRK04778 105 HEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYRELRKSL-----------------LANRFSFGPAL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 699 KFLEDELAKLQASFQKSST-------DDARKLRDEMDEHTNsiqeEFKTRIDElnrrVENLLRE-NNRLKSEVNPLKDKY 770
Cdd:PRK04778 168 DELEKQLENLEEEFSQFVEltesgdyVEAREILDQLEEELA----ALEQIMEE----IPELLKElQTELPDQLQELKAGY 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 771 RDLENE-YNstqrrIEEKetqirysddirrNIQKDLDDLREKYDRvhtdNEKILGELEHAQkaahlAEQQLKEIKIQRDd 849
Cdd:PRK04778 240 RELVEEgYH-----LDHL------------DIEKEIQDLKEQIDE----NLALLEELDLDE-----AEEKNEEIQERID- 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 850 yqkqkdeharHLFDIrhkLETEIKGRQDLEKNgarnndeldklrqtISDYESQINLLRRHNDELDTtikghqgKITHL-- 927
Cdd:PRK04778 293 ----------QLYDI---LEREVKARKYVEKN--------------SDTLPDFLEHAKEQNKELKE-------EIDRVkq 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 928 -----ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALKETIRKLENELEKLRNENKELVGKEARARD 999
Cdd:PRK04778 339 sytlnESELESVRQLEKQLESLEKQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMLQGLRKDELEARE 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 1000 AANQ----------QLSRANL--------------------LNKELEDTKQDLKhstDVNKQLEQ---DIRDLKER 1042
Cdd:PRK04778 419 KLERyrnklheikrYLEKSNLpglpedylemffevsdeieaLAEELEEKPINME---AVNRLLEEateDVETLEEE 491
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1976-2247 |
6.33e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.55 E-value: 6.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTE 2055
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAE-------LAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2056 TDLRQQLETAKnekrvatkelEDLKRRLAQLENERRNSsqlsdgwkkekitllkKIELLENEKRRTDAAIRETALQR--E 2133
Cdd:COG4942 93 AELRAELEAQK----------EELAELLRALYRLGRQP----------------PLALLLSPEDFLDAVRRLQYLKYlaP 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2134 AIEKSLNAMERENKELykncaqlqqQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQ 2213
Cdd:COG4942 147 ARREQAEELRADLAEL---------AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
250 260 270
....*....|....*....|....*....|....
gi 1845979720 2214 LEDQIAILRDQLDGERRRRREYVDRSMVNDIGRL 2247
Cdd:COG4942 218 LQQEAEELEALIARLEAEAAAAAERTPAAGFAAL 251
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1129-1590 |
6.87e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.62 E-value: 6.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNIL--DRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgndkTENDITEL 1206
Cdd:PRK03918 140 ILESDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLR----EINEISSE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1207 KRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRdklnNLEKQLADSLNRENELEREKRDYDE--K 1284
Cdd:PRK03918 216 LPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKLEEKIR----ELEERIEELKKEIEELEEKVKELKElkE 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1285 INSLYGQNQKIKDEWDDFRNDADKEIQKWktdaytvRSEAKALEttntalkAQLQAANDRidhltktvndhTSKVRDLTS 1364
Cdd:PRK03918 291 KAEEYIKLSEFYEEYLDELREIEKRLSRL-------EEEINGIE-------ERIKELEEK-----------EERLEELKK 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1365 QVRHLEDELADTKGNlVQKEMDLESTQNRLRSLEDQHSTLQSDanKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1444
Cdd:PRK03918 346 KLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1445 SAEDALKELKNS-----LSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTnDKLITSDTERNALR-- 1517
Cdd:PRK03918 423 ELKKAIEELKKAkgkcpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKel 501
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1518 -NELQKLSQELK-FGNEQIQRKSDEYQTTIDDLA--HSHRVSEDSRLNALQELEARKYEINdltSRLDSTEQRLATL 1590
Cdd:PRK03918 502 aEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIklKGEIKSLKKELEKLEELKKKLAELE---KKLDELEEELAEL 575
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
605-1246 |
7.62e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 7.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 605 EALRAVRNTFRnkdnDIQQLERKLKIAESQVK---EFLNKFENADEARRRLDK-QFADAKREISNLQKSVDEAERNSRRT 680
Cdd:COG4913 225 EAADALVEHFD----DLERAHEALEDAREQIEllePIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 681 DDKLRASEAERVAAEKARKFLEDELAKLQASFQKSSTDD-----------------ARKLRDEMDEHTNSI--------- 734
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDRleqlereierlereleeRERRRARLEALLAALglplpasae 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 735 -----QEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRR---IEEKETQIRysDDIRRNIQKDLD 806
Cdd:COG4913 381 efaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRksnIPARLLALR--DALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 807 DL---------REKYDRVHTDNEKILG--------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIR---H 866
Cdd:COG4913 459 ELpfvgelievRPEEERWRGAIERVLGgfaltllvPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDslaG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 867 KLET-----------EIKGRQDLEKngARNNDELDKLRQTISDyESQI-NLLRRHndELDTTIKGHQG---------KIT 925
Cdd:COG4913 539 KLDFkphpfrawleaELGRRFDYVC--VDSPEELRRHPRAITR-AGQVkGNGTRH--EKDDRRRIRSRyvlgfdnraKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 926 HLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDG---------DVQALKETIRKLENELEKLRNENKELvgkear 996
Cdd:COG4913 614 ALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaeyswdeiDVASAEREIAELEAELERLDASSDDL------ 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 997 arDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIgkggrisrdsttgtdggafgdRSSVADPSR 1076
Cdd:COG4913 688 --AALEEQLEE---LEAELEELEEEL-------DELKGEIGRLEKELEQA---------------------EEELDELQD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1077 TRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihGRDGRDGRDAGNRgthTITNTKERIERIEKNILDRYHD------- 1149
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVEREL--RENLEERIDALRA---RLNRAEEELERAMRAFNREWPAetadlda 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1150 ------------DELVEHKIREVNDRWKRELER------------LENEKDDLERRIRELEDELSQIGRGNDKTendIT- 1204
Cdd:COG4913 810 dleslpeylallDRLEEDGLPEYEERFKELLNEnsiefvadllskLRRAIREIKERIDPLNDSLKRIPFGPGRY---LRl 886
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 1845979720 1205 ELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENL 1246
Cdd:COG4913 887 EARPRPDPEVREFRQELRAVTSGASLFDEELSEARFAALKRL 928
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
520-1047 |
9.32e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 9.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsiKRTRSLSPGKT 599
Cdd:PRK02224 240 DEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE---------------ERDDLLAEAGL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 600 PLPPSEALRAVRNTFrnkDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRR 679
Cdd:PRK02224 305 DDADAEAVEARREEL---EDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVED 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 680 TDDKLRASEAERVAAEKARKFLEDELaklqasfqksstDDARKLRDEMDEHTNSIQEEFKTRIDELnRRVENLLRENNRL 759
Cdd:PRK02224 382 RREEIEELEEEIEELRERFGDAPVDL------------GNAEDFLEELREERDELREREAELEATL-RTARERVEEAEAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 760 KSEVN------PLKDkyrdleneyNSTQRRIEEKETQIrysddirRNIQKDLDDLREKYDRVhtdnEKILGELEHAQKaa 833
Cdd:PRK02224 449 LEAGKcpecgqPVEG---------SPHVETIEEDRERV-------EELEAELEDLEEEVEEV----EERLERAEDLVE-- 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 834 hlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDEL 913
Cdd:PRK02224 507 --AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 914 DTTIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQkEKQDILNQKLKldgdvqALKETIRKLENELEKLRNEnkelvgk 993
Cdd:PRK02224 585 KERIES-LERIRTLLAAIADAEDEIERLREKREALA-ELNDERRERLA------EKRERKRELEAEFDEARIE------- 649
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 994 EARA-RDAANQQLSRANLLNKELEDTKQDLKHSTD-VNKQLEQdIRDLKERLANIG 1047
Cdd:PRK02224 650 EAREdKERAEEYLEQVEEKLDELREERDDLQAEIGaVENELEE-LEELRERREALE 704
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
938-1529 |
1.06e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 938 IEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---LKETIRKLENELEKLRNENKELVGKEARARdaanQQLSRANLLNKE 1014
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRtenIEELIKEKEKELEEVLREINEISSELPELR----EELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1015 LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgdrssvadpsrtrgaagstvfvpaaEDIE 1094
Cdd:PRK03918 233 LEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEI---------------------------------EELE 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1095 SRGG--GEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEhKIREVNDRWKRELERLE 1172
Cdd:PRK03918 280 EKVKelKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-ELKKKLKELEKRLEELE 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1173 nEKDDLERRIRELEDELSQI-----GRGNDKTENDITELKRKHaaeiDKLKSDISALHDKhLSDLDDEKEQYGKAVENLK 1247
Cdd:PRK03918 359 -ERHELYEEAKAKKEELERLkkrltGLTPEKLEKELEELEKAK----EEIEEEISKITAR-IGELKKEIKELKKAIEELK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1248 SVE-------------------DDLRDKLNNLEKQLADSLNRENELEREKRDYDEKIN---------SLYGQNQKIKDEW 1299
Cdd:PRK03918 433 KAKgkcpvcgrelteehrkellEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKkeseliklkELAEQLKELEEKL 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1300 DDFrnDADKEIQKWKtdaytvrsEAKALETTNTALKAQLQAANDRIdhltKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1379
Cdd:PRK03918 513 KKY--NLEELEKKAE--------EYEKLKEKLIKLKGEIKSLKKEL----EKLEELKKKLAELEKKLDELEEELAELLKE 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1380 LVQKEM-DLESTQNRLRSLEDQHSTLQSdANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLS 1458
Cdd:PRK03918 579 LEELGFeSVEELEERLKELEPFYNEYLE-LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS 657
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1459 haKTEKERLQNAFREKTKQadhLNQLASQFDTkLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKF 1529
Cdd:PRK03918 658 --EEEYEELREEYLELSRE---LAGLRAELEE-LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALER 722
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
654-1462 |
1.15e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 61.22 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 654 KQFADAKREISNLQKSVDEAERNSR-------RTDDKLRA---SEAERVAAEKARKfLEDELAKLQASFQKSSTDDARKL 723
Cdd:TIGR01612 620 KKAIDLKKIIENNNAYIDELAKISPyqvpehlKNKDKIYStikSELSKIYEDDIDA-LYNELSSIVKENAIDNTEDKAKL 698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 724 RD---EMDEHTNSIQEeFKTRIDELNrrVENLLRENNRLKSEVNPLKDK-YRDLENEYNSTQRRIEEKETQI-------- 791
Cdd:TIGR01612 699 DDlksKIDKEYDKIQN-METATVELH--LSNIENKKNELLDIIVEIKKHiHGEINKDLNKILEDFKNKEKELsnkindya 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 792 RYSDDIRRNIQKdLDDLREKY-DRVHTDNEKIlgelEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLET 870
Cdd:TIGR01612 776 KEKDELNKYKSK-ISEIKNHYnDQINIDNIKD----EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDK 850
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 871 EIkgrqDLEKNGARNNDeldklrqtiSDYESQINLLRRHNDELDTTikghqgKITHLENELHSRSGEIeklNDLNQRLQK 950
Cdd:TIGR01612 851 FI----NFENNCKEKID---------SEHEQFAELTNKIKAEISDD------KLNDYEKKFNDSKSLI---NEINKSIEE 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 951 EKQDIlNQKLKLDGDV---QALKETIRKLENELEKLR---NENKELVgKEARARDAANQQLSRANLLNK--ELEDTKQDL 1022
Cdd:TIGR01612 909 EYQNI-NTLKKVDEYIkicENTKESIEKFHNKQNILKeilNKNIDTI-KESNLIEKSYKDKFDNTLIDKinELDKAFKDA 986
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1023 KHST--DVNKQLEQDIRDLKERLANiGKGGRISRDsttgtdggaFGDRSSvadpsrtrgaagstvfvpAAEDIESRG-GG 1099
Cdd:TIGR01612 987 SLNDyeAKNNELIKYFNDLKANLGK-NKENMLYHQ---------FDEKEK------------------ATNDIEQKIeDA 1038
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1100 EIDIPSSGDVIHGrdgrdgrdagnrgthTITNTKERIER-IEKNIlDRYHDDELVEHKIREVNDRWKRELERLENEKDDL 1178
Cdd:TIGR01612 1039 NKNIPNIEIAIHT---------------SIYNIIDEIEKeIGKNI-ELLNKEILEEAEINITNFNEIKEKLKHYNFDDFG 1102
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1179 ER-------RIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALH---DKHLSdlDDEKEQYGKAVENLKS 1248
Cdd:TIGR01612 1103 KEenikyadEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEdvaDKAIS--NDDPEEIEKKIENIVT 1180
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1249 VeddlRDKLNNLEKQLADSLNRENELEREKRDYDE--KINSLYGQN------QKIKDEWDDFRNDAdKEIQKWKTDAYTV 1320
Cdd:TIGR01612 1181 K----IDKKKNIYDEIKKLLNEIAEIEKDKTSLEEvkGINLSYGKNlgklflEKIDEEKKKSEHMI-KAMEAYIEDLDEI 1255
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1321 RSEAKALETTntalkaqlQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQ 1400
Cdd:TIGR01612 1256 KEKSPEIENE--------MGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIR----EKSLKIIEDFSEESDINDI 1323
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1401 HSTLQ---SDANKWRGELDAALRE----NDILKSNntNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1462
Cdd:TIGR01612 1324 KKELQknlLDAQKHNSDINLYLNEianiYNILKLN--KIKKIIDEVKEYTKEIEENNKNIKDELDKSEK 1390
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
864-1047 |
1.16e-08 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 60.64 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 864 IRHKLETEI-KGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELdttikghqgkithlENELHSRSGEIEKLN 942
Cdd:COG2433 382 LEELIEKELpEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEEL--------------EAELEEKDERIERLE 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 943 DlnqRLQKEKQDIlNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQD 1021
Cdd:COG2433 448 R---ELSEARSEE-RREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKELWKLEHSGELVPVKVVEKfTKEA 523
|
170 180 190
....*....|....*....|....*....|....*.
gi 1845979720 1022 LKHSTDVNKQLEQDI----------RDLKERLANIG 1047
Cdd:COG2433 524 IRRLEEEYGLKEGDVvylrdasgagRSTAELLAEAG 559
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1738-2218 |
1.60e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1738 ANLEGTLQSLLNKIEklEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLlrsq 1817
Cdd:PRK02224 183 SDQRGSLDQLKAQIE--EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETL---- 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1818 EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESdsd 1897
Cdd:PRK02224 257 EAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEC--- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1898 tnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSK----TSHEYQL 1973
Cdd:PRK02224 334 ----RVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdAPVDLGN 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1974 LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQ---------------------RVHDVNNRVSELQRQLQDANT 2032
Cdd:PRK02224 410 AEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpecgqpvegsphveTIEEDRERVEELEAELEDLEE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2033 EKNRVEDRFLSVEKVVNTMRTTETdLRQQLETAknEKRVATKElEDLKRRLAQLENERRNSSQLSDgwkkekitllkkie 2112
Cdd:PRK02224 490 EVEEVEERLERAEDLVEAEDRIER-LEERREDL--EELIAERR-ETIEEKRERAEELRERAAELEA-------------- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2113 llENEKRRTDAAIRETALQREAIE-KSLNAMERENKElykncaqlqqqiaqlEMENGNRILELTNKqREEQERQLIRMRQ 2191
Cdd:PRK02224 552 --EAEEKREAAAEAEEEAEEAREEvAELNSKLAELKE---------------RIESLERIRTLLAA-IADAEDEIERLRE 613
|
490 500 510
....*....|....*....|....*....|
gi 1845979720 2192 EKGQI-EKVIENRER--THRNRIKQLEDQI 2218
Cdd:PRK02224 614 KREALaELNDERRERlaEKRERKRELEAEF 643
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1751-2222 |
1.60e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 1.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1751 IEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRlqsaKTLLRSQEEALKQRDEERRQ 1830
Cdd:PRK03918 181 LEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL----KEEIEELEKELESLEGSKRK 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1831 MKSKMVAAELQARGKEAQLRHLNEQLKnlrtdldnahtDIRSLRDKEEQWDssrfQLETKMRESDSDTNKYQLQIASFES 1910
Cdd:PRK03918 257 LEEKIRELEERIEELKKEIEELEEKVK-----------ELKELKEKAEEYI----KLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1911 ERQILTEKIKELDGalrlSDSKVQDMKDDTDKLRRDL----TKAESVENELRKTIDIQSKTSHEYQLLKDQLlntQNELN 1986
Cdd:PRK03918 322 EINGIEERIKELEE----KEERLEELKKKLKELEKRLeeleERHELYEEAKAKKEELERLKKRLTGLTPEKL---EKELE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1987 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQ---------RQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD 2057
Cdd:PRK03918 395 ELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcGRELTEEHRKELLEEYTAELKRIEKELKEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2058 LRQ------QLETA-KNEKRVAT-----KELEDLKRRLAQLENER--------RNSSQLSDGWKKEKITL---LKKIELL 2114
Cdd:PRK03918 475 ERKlrkelrELEKVlKKESELIKlkelaEQLKELEEKLKKYNLEElekkaeeyEKLKEKLIKLKGEIKSLkkeLEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2115 ENEKRRTDAAIREtalqreaIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQReEQERQLIRMRQEKG 2194
Cdd:PRK03918 555 KKKLAELEKKLDE-------LEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEK-ELEREEKELKKLEE 626
|
490 500
....*....|....*....|....*...
gi 1845979720 2195 QIEKVIENRERThRNRIKQLEDQIAILR 2222
Cdd:PRK03918 627 ELDKAFEELAET-EKRLEELRKELEELE 653
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
851-1048 |
1.87e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 851 QKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENE 930
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 931 LHSRSGEIEKLNDLNQRL--QKEKQDILNQK--LKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 1006
Cdd:COG4942 99 LEAQKEELAELLRALYRLgrQPPLALLLSPEdfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1845979720 1007 RANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGK 1048
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQ 220
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
520-1340 |
1.91e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.99 E-value: 1.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIERNIELESRGDDSQR--KIAELEAELRRNREKLNEAQGALKKLHEMA--QDSEKNVDGTVSIKRTRSLS 595
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKlkEQAKKALEYYQLKEKLELEEEYLLYLDYLKlnEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 596 PGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAER 675
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 676 NSRRTDDKLRASEAERVAAEKARKFLEDELakLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRE 755
Cdd:pfam02463 336 EIEELEKELKELEIKREAEEEEEEELEKLQ--EKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 756 NNRLKSEVNPLKDKYRDLENEynsTQRRIEEKETQIRysddIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQkaahL 835
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEE---EEESIELKQGKLT----EEKEELEKQELKLLKDELELKKSEDLLKETQLVK----L 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 836 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT 915
Cdd:pfam02463 483 QEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 916 TIKGhQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQaLKETIRKLENELEKLRNENKELVGKE- 994
Cdd:pfam02463 563 RQKL-VRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATL-EADEDDKRAKVVEGILKDTELTKLKEs 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 995 ARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADP 1074
Cdd:pfam02463 641 AKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEI--LRRQLEIKKKEQREKEELKKLKLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1075 SRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRdagnrgthtitntKERIERIEKNILDRYHDDELVE 1154
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKE-------------EEKSELSLKEKELAEEREKTEK 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1155 HKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENdiTELKRKHAAEIDKLKSDISALHDKHLSDLDD 1234
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKE--EELEELALELKEEQKLEKLAEEELERLEEEI 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1235 EKEQYgKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWK 1314
Cdd:pfam02463 864 TKEEL-LQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
810 820
....*....|....*....|....*.
gi 1845979720 1315 TDAYTVRSEAKALETTNTALKAQLQA 1340
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLA 968
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
829-1593 |
2.49e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 59.68 E-value: 2.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 829 AQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTIsdyesqinlLRR 908
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKV---------FQG 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 909 HNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRnenk 988
Cdd:TIGR00606 299 TDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA---- 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 989 elvgkearardaanqqlsranlLNKELEdtkqDLKHSTDVNKQLEQDIRDLKERLAniGKGGRISRDSTTGTDGGAFGDR 1068
Cdd:TIGR00606 375 ----------------------TRLELD----GFERGPFSERQIKNFHTLVIERQE--DEAKTAAQLCADLQSKERLKQE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1069 ssvadpsrtrgaagstvfvpAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGtHTITNTKERIERIEKNILDRYH 1148
Cdd:TIGR00606 427 --------------------QADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL-QQLEGSSDRILELDQELRKAER 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1149 DDELVEHKirEVNDRWKRELERLENEKDDLERRIRELEDELSQIGRgnDKTENDITELKRKHAAEIDKLKSDISALHDKH 1228
Cdd:TIGR00606 486 ELSKAEKN--SLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNH--HTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1229 LSDLDDE---KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqNQKIKD--EWDDFR 1303
Cdd:TIGR00606 562 LTSLLGYfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSY---EDKLFDvcGSQDEE 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1304 NDAD---KEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEladtkgnl 1380
Cdd:TIGR00606 639 SDLErlkEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK-------- 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1381 vqkemdLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHA 1460
Cdd:TIGR00606 711 ------LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1461 K------TEKERLQNAFREKTKQADHL--NQLASQFDTKLTKLRNELQDTNDKL--ITSDTErnalrnELQKLSQELKFG 1530
Cdd:TIGR00606 785 KvcltdvTIMERFQMELKDVERKIAQQaaKLQGSDLDRTVQQVNQEKQEKQHELdtVVSKIE------LNRKLIQDQQEQ 858
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 1531 NEQIQRKSDEYQT---TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1593
Cdd:TIGR00606 859 IQHLKSKTNELKSeklQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQE 924
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1736-1933 |
2.58e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.62 E-value: 2.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1815
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1816 SQEEALKQR-----------------------DEERRQMKSKMVAAELQARGKEaqLRHLNEQLKNLRTDLDNAHTDIRS 1872
Cdd:COG4942 101 AQKEELAELlralyrlgrqpplalllspedflDAVRRLQYLKYLAPARREQAEE--LRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1873 LRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKV 1933
Cdd:COG4942 179 LLAELEEeraaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1737-2198 |
2.77e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 59.35 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1737 IANLEGTLQSLLNKIEK----LEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKT 1812
Cdd:pfam05483 224 IQHLEEEYKKEINDKEKqvslLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKM 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1813 LLRSQEEALKQRdEERRQMKSKMVAAELQArgKEAQLRHLNE----------QLKNLRTDLDN-AHTDIRSLRDKEEQWD 1881
Cdd:pfam05483 304 SLQRSMSTQKAL-EEDLQIATKTICQLTEE--KEAQMEELNKakaahsfvvtEFEATTCSLEElLRTEQQRLEKNEDQLK 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1882 SSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDgalrlSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI 1961
Cdd:pfam05483 381 IITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD-----EKKQFEKIAEELKGKEQELIFLLQAREKEIHDL 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1962 DIQ---SKTSHEYQLLKDQLLNTQNElngannrKQQLENELLNVRSE--VRDYKQRVHDVNNRVSELQRQLQDANTEKNR 2036
Cdd:pfam05483 456 EIQltaIKTSEEHYLKEVEDLKTELE-------KEKLKNIELTAHCDklLLENKELTQEASDMTLELKKHQEDIINCKKQ 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2037 vEDRFLsveKVVNTMRTTETDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLEN 2116
Cdd:pfam05483 529 -EERML---KQIENLEEKEMNLRDELESVREEFI---QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2117 EKRRTDAAIRETALQREAIEKSLNAmerENKELykNCAQLQQQIAQLEMENG-NRILELTNKQREEQERQLIRMRQEKGQ 2195
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSA---ENKQL--NAYEIKVNKLELELASAkQKFEEIIDNYQKEIEDKKISEEKLLEE 676
|
...
gi 1845979720 2196 IEK 2198
Cdd:pfam05483 677 VEK 679
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
621-1254 |
3.27e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 59.47 E-value: 3.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 621 IQQLERKLKIAESQVKEFLNKFenaDEARRRLDKQFADAKREIsnlQKSVDEAERNSRRTDDKLRASEAERVAAE-KARK 699
Cdd:pfam12128 260 LSHLHFGYKSDETLIASRQEER---QETSAELNQLLRTLDDQW---KEKRDELNGELSAADAAVAKDRSELEALEdQHGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 700 FLEDELAKLQA------SFQ----------KSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV 763
Cdd:pfam12128 334 FLDADIETAAAdqeqlpSWQselenleerlKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVA 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 764 --------NPLKDKYRDLENEYNSTQRRI-----------------EEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 818
Cdd:pfam12128 414 eddlqaleSELREQLEAGKLEFNEEEYRLksrlgelklrlnqatatPELLLQLENFDERIERAREEQEAANAEVERLQSE 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 819 NEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHK------------LETEIKGRQDL--EKNGAR 884
Cdd:pfam12128 494 LRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKeapdweqsigkvISPELLHRTDLdpEVWDGS 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 885 NNDE-------LDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKlndlnqrLQKEKQDILN 957
Cdd:pfam12128 574 VGGElnlygvkLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEK-------ASREETFART 646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 958 QKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKElEDTKQDLKHSTDVNKQLEQDIR 1037
Cdd:pfam12128 647 ALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLE-EQKEQKREARTEKQAYWQVVEG 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1038 DLKERLANIgkggrisrdsttgtdggafgdRSSVADPSRTRGAAGSTVFVPAAEDIESRGggeIDipssGDVIHGRDgrd 1117
Cdd:pfam12128 726 ALDAQLALL---------------------KAAIAARRSGAKAELKALETWYKRDLASLG---VD----PDVIAKLK--- 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1118 grdagnRGTHTITNTKERIERIEKNILdRYHDdelvehkirEVNDRWKRELERLENEKDDLERRIRELEDELSQI----- 1192
Cdd:pfam12128 775 ------REIRTLERKIERIAVRRQEVL-RYFD---------WYQETWLQRRPRLATQLSNIERAISELQQQLARLiadtk 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1193 --------GRG-NDKTENDITELKRKHAAEIDKL----------KSDISALH-----DKHLSDLDDEKEQYGKAVENLKS 1248
Cdd:pfam12128 839 lrraklemERKaSEKQQVRLSENLRGLRCEMSKLatlkedanseQAQGSIGErlaqlEDLKLKRDYLSESVKKYVEHFKN 918
|
....*.
gi 1845979720 1249 VEDDLR 1254
Cdd:pfam12128 919 VIADHS 924
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
643-1054 |
3.45e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 59.01 E-value: 3.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 643 ENADEARRRLDKQFADAKREISNLQKSVDEAE---RNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQksstdd 719
Cdd:COG4717 53 KEADELFKPQGRKPELNLKELKELEEELKEAEekeEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ------ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 ARKLRDEMDEHTNSIqEEFKTRIDELNRRVEnllrennrlksEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirr 799
Cdd:COG4717 127 LLPLYQELEALEAEL-AELPERLEELEERLE-----------ELRELEEELEELEAELAELQEELEELLEQLSLAT---- 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 800 niQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEI--KIQRDDYQKQKDEHARHLFDI------------- 864
Cdd:COG4717 191 --EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLenELEAAALEERLKEARLLLLIAaallallglggsl 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 865 -------------------------RHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKG 919
Cdd:COG4717 269 lsliltiagvlflvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 920 HQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQ----DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVgkEA 995
Cdd:COG4717 349 LQELLREAEELEEEL--QLEELEQEIAALLAEAGvedeEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL--EA 424
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 996 RARDAANQQLSRanlLNKELEDTKQDLkhstdvnKQLEQDIRDLKERLANIGKGGRISR 1054
Cdd:COG4717 425 LDEEELEEELEE---LEEELEELEEEL-------EELREELAELEAELEQLEEDGELAE 473
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
517-1017 |
4.00e-08 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 58.60 E-value: 4.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 517 ELHKELMTKYEESIERNIELESRGDDSQRKIA-------ELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK 589
Cdd:pfam05557 13 QLQNEKKQMELEHKRARIELEKKASALKRQLDresdrnqELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 590 RTRSLSpgktplppseaLRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKS 669
Cdd:pfam05557 93 NEKESQ-----------LADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 670 VDEAE-----------RNSRRTDDKLRA----SEAERVA---AEKAR---------------KFLEDELAKLQASFQKSS 716
Cdd:pfam05557 162 QSSLAeaeqrikelefEIQSQEQDSEIVknskSELARIPeleKELERlrehnkhlnenienkLLLKEEVEDLKRKLEREE 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 717 TDDAR---------KLRDEMDEHTNSIQ---------EEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYN 778
Cdd:pfam05557 242 KYREEaatlelekeKLEQELQSWVKLAQdtglnlrspEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQELA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 779 STQRRIEEKETQIRYSDDIRRNIQKDL-------DDLR---EKYDRVHTDNEKILGELEHAQKAAHLAEQ---QLKEIKI 845
Cdd:pfam05557 322 QYLKKIEDLNKKLKRHKALVRRLQRRVllltkerDGYRailESYDKELTMSNYSPQLLERIEEAEDMTQKmqaHNEEMEA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 846 QRDdyqkQKDEHARHLFDIRHKLETEIKG--RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGH--Q 921
Cdd:pfam05557 402 QLS----VAEEELGGYKQQAQTLERELQAlrQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRclQ 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 922 GKITHLENE-LHSRSGEIeklndlnqrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDA 1000
Cdd:pfam05557 478 GDYDPKKTKvLHLSMNPA----------AEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLD 547
|
570
....*....|....*..
gi 1845979720 1001 ANQQLSRANLLNKELED 1017
Cdd:pfam05557 548 LRKELESAELKNQRLKE 564
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
527-802 |
4.36e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.93 E-value: 4.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 527 EESIERNIeLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRtrslspgktplppsea 606
Cdd:TIGR02169 781 LNDLEARL-SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI---------------- 843
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 607 lravrntfrnkDNDIQQLERKLKIAESQVK--EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERnsrrtddKL 684
Cdd:TIGR02169 844 -----------DLKEQIKSIEKEIENLNGKkeELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER-------KI 905
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 685 RASEAERvaaEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-- 762
Cdd:TIGR02169 906 EELEAQI---EKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEye 982
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 763 -----VNPLKDKYRDLENEYNSTQRRIEEKETQIRYS-----DDIRRNIQ 802
Cdd:TIGR02169 983 evlkrLDELKEKRAKLEEERKAILERIEEYEKKKREVfmeafEAINENFN 1032
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
500-979 |
5.07e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.24 E-value: 5.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 500 LEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELEsrgdDSQRKIAELEAELRRNREKLNEAQGALKKLhEMAQDSE 579
Cdd:COG4717 55 ADELFKPQGRKPELNLKEL-KELEEELKEAEEKEEEYA----ELQEELEELEEELEELEAELEELREELEKL-EKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 580 KNVDGTVSIKRTRSLSPGKTplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEAR-RRLDKQFAD 658
Cdd:COG4717 129 PLYQELEALEAELAELPERL-----EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 659 AKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSstddARKLRDEMDEHTNSIQEEF 738
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLA----LLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 739 KTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTD 818
Cdd:COG4717 280 FLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 819 NEKILGELEHAQKAAHLAEQQLKEIK--IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTI 896
Cdd:COG4717 360 EEELQLEELEQEIAALLAEAGVEDEEelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEAL-----DEEELEEEL 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 897 SDYESQINLLRRHNDELDTTIKGHQGKITHLENelhsrSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 976
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEY 509
|
...
gi 1845979720 977 ENE 979
Cdd:COG4717 510 REE 512
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
605-1447 |
5.14e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.90 E-value: 5.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 605 EALRAVRNTFRNKDNDIQ---QLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTD 681
Cdd:TIGR00606 189 ETLRQVRQTQGQKVQEHQmelKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLD 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 682 DKLRASEAERVAAEKARKFLEDELAKLqasFQKSstddarklrdemDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKS 761
Cdd:TIGR00606 269 NEIKALKSRKKQMEKDNSELELKMEKV---FQGT------------DEQLNDLYHNHQRTVREKERELVDCQRELEKLNK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 762 EVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQ--KDLDDL-REKYDRVHTDNE---KILGELEHAQKAAHL 835
Cdd:TIGR00606 334 ERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLAtrLELDGFeRGPFSERQIKNFhtlVIERQEDEAKTAAQL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 836 -AEQQLKEIKIQR--DDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGAR---NNDELDKLRQTISDYESQINLLrrh 909
Cdd:TIGR00606 414 cADLQSKERLKQEqaDEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegSSDRILELDQELRKAERELSKA--- 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 910 ndELDTTIKGHQGKITHLENE----LHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIR----------- 974
Cdd:TIGR00606 491 --EKNSLTETLKKEVKSLQNEkadlDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsllgy 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 975 -----KLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELED-TKQDLKHSTDV-----NKQLEQDIRDLKERL 1043
Cdd:TIGR00606 569 fpnkkQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESkEEQLSSYEDKLfdvcgSQDEESDLERLKEEI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1044 ANIGKGGRISRDSTTGTDG--GAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEID-IPSSGDVIHGRDGRDGRD 1120
Cdd:TIGR00606 649 EKSSKQRAMLAGATAVYSQfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDkLKSTESELKKKEKRRDEM 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1121 AG---------NRGTHTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRE---------LERLENEKDDLERRI 1182
Cdd:TIGR00606 729 LGlapgrqsiiDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvcltdvtiMERFQMELKDVERKI 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1183 RELEDELSqiGRGNDKTENDITELKRKHAAEIDKLKSDISALH-------------DKHLSDLDDEKEQYGKAVENLKSV 1249
Cdd:TIGR00606 809 AQQAAKLQ--GSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRkliqdqqeqiqhlKSKTNELKSEKLQIGTNLQRRQQF 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1250 EDDLRDK---LNNLEKQLADSLNRENELEREKRDY----DEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1322
Cdd:TIGR00606 887 EEQLVELsteVQSLIREIKDAKEQDSPLETFLEKDqqekEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD 966
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1323 ----EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE 1398
Cdd:TIGR00606 967 gkddYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQ 1046
|
890 900 910 920
....*....|....*....|....*....|....*....|....*....
gi 1845979720 1399 DQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAE 1447
Cdd:TIGR00606 1047 MQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
802-1592 |
6.64e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 6.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 802 QKDLDDLREKYDRVhtdnEKILGELEhaqkaahlaeQQLKEIKIQRDD---YQKQKDE----HARHLFDIRHKLETEIkg 874
Cdd:COG1196 178 ERKLEATEENLERL----EDILGELE----------RQLEPLERQAEKaerYRELKEElkelEAELLLLKLRELEAEL-- 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 875 rQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD 954
Cdd:COG1196 242 -EELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 955 ILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQ 1034
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1035 DIRDLKERLANIgkggrisrdsttgtdggafgdrssvadpsrtrgaagstvfvpaaediesrgggeidipssgdvihgrd 1114
Cdd:COG1196 401 QLEELEEAEEAL-------------------------------------------------------------------- 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1115 grdgrdagnrgthtitntKERIERIEKNILDRyhddelvehkirevndrwKRELERLENEKDDLERRIRELEDELSQIGR 1194
Cdd:COG1196 413 ------------------LERLERLEEELEEL------------------EEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1195 GNDKTENDITELKRKHA---AEIDKLKSDISALHDKHLSDLDDEKEQYGKAvenlksvEDDLRDKLNNLEKQLADSLNRE 1271
Cdd:COG1196 457 EEEALLELLAELLEEAAlleAALAELLEELAEAAARLLLLLEAEADYEGFL-------EGVKAALLLAGLRGLAGAVAVL 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1272 NELEREKRDYDEKINSLYGQNQKIKDEWDdfrndADKEIQKWKTDaytvRSEAKALETTNTALKAQLQAANDRIDHLTKT 1351
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEV-----AAAAIEYLKAA----KAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1352 VNDHTSKVRDLTSQVRHLEDELADTkgNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALRENDILKSNN 1429
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGR--TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLtgGSRRELLAALLEAE 678
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1430 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS 1509
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1510 DTERNALRNELQKLSQELK-FG--NeqiqrksdeyqttiddlahshrvsedsrLNALQELEARKYEINDLTSRLDSTEQR 1586
Cdd:COG1196 759 PPDLEELERELERLEREIEaLGpvN----------------------------LLAIEEYEELEERYDFLSEQREDLEEA 810
|
....*.
gi 1845979720 1587 LATLQQ 1592
Cdd:COG1196 811 RETLEE 816
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1333-1479 |
9.31e-08 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 55.32 E-value: 9.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1333 ALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdaNKwr 1412
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN--NK-- 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1413 gELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQAD 1479
Cdd:COG1579 90 -EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
619-1033 |
1.00e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.42 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 619 NDIQQLERKLKIAESQVKEFLNK--------------FENADEARRRLDKQFADAKREISNL--QKSVDEAERNSRRTDD 682
Cdd:pfam05483 268 DKANQLEEKTKLQDENLKELIEKkdhltkeledikmsLQRSMSTQKALEEDLQIATKTICQLteEKEAQMEELNKAKAAH 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 683 KLRASE--------AERVAAEKAR-KFLEDELAKLQASFQKSSTDdarklRDEMDEHTNSIQ---EEFKTRIDElnrrVE 750
Cdd:pfam05483 348 SFVVTEfeattcslEELLRTEQQRlEKNEDQLKIITMELQKKSSE-----LEEMTKFKNNKEvelEELKKILAE----DE 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 751 NLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGE----L 826
Cdd:pfam05483 419 KLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHcdklL 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 827 EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLL 906
Cdd:pfam05483 499 LENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSI 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 907 RRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKeKQDILNQKLkldgdvQALKETIRKLENELEKLRNE 986
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK-KGSAENKQL------NAYEIKVNKLELELASAKQK 651
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1845979720 987 NKELVgkEARARDAANQQLSRANLLnKELEDTKQDLKHSTDVNKQLE 1033
Cdd:pfam05483 652 FEEII--DNYQKEIEDKKISEEKLL-EEVEKAKAIADEAVKLQKEID 695
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
737-1510 |
1.03e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 57.75 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 737 EFKTRIDELNRRVENLLRENNRLKSevnpLKDKYRDLENEYNSTQRRIEEkeTQIRYSDDIRRNIQKDldDLREKYDRVH 816
Cdd:TIGR01612 386 EFLEEIKKIAKQRAIFFYNAKKLKH----LEILYKHQEDILNNFHKTIER--LIFEKPDPNNNNIFKD--DFDEFNKPIP 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 817 TDNEKILgelehAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgarnnDELDKLRQTI 896
Cdd:TIGR01612 458 KSKLKAL-----EKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKLILMRMKDFKDIIDFMELYKP-----DEVPSKNIIG 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 897 SDYESQINLLRRhnDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKL 976
Cdd:TIGR01612 528 FDIDQNIKAKLY--KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEIIYINKLKLEL 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 977 ENELEKLRNENKEL-----VGKEARARDAANQQLSRANLLNKELEDTKQDLKHST---DVNKQLEQDIRDLKERLANIGK 1048
Cdd:TIGR01612 606 KEKIKNISDKNEYIkkaidLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTiksELSKIYEDDIDALYNELSSIVK 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1049 GGRIsrDSTTgtDGGAFGDRSSVADPSRTRGAAGSTVFVPA-AEDIESRGGGEID-IPSSGDVIHGrdgrdgrDAGNRGT 1126
Cdd:TIGR01612 686 ENAI--DNTE--DKAKLDDLKSKIDKEYDKIQNMETATVELhLSNIENKKNELLDiIVEIKKHIHG-------EINKDLN 754
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1127 HTITNTKERIERIEKNILD-RYHDDEL--VEHKIREVNDRWKRELErLENEKDDLERRIRELEDELSQ-IGRGNDKTEND 1202
Cdd:TIGR01612 755 KILEDFKNKEKELSNKINDyAKEKDELnkYKSKISEIKNHYNDQIN-IDNIKDEDAKQNYDKSKEYIKtISIKEDEIFKI 833
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1203 ITELKRKHAAEIDKLKSDISaLHDKHLSDLDDEKEQYGKAVENLKSVEDDlrDKLNNLEKQLADSLNRENELEREKRDYD 1282
Cdd:TIGR01612 834 INEMKFMKDDFLNKVDKFIN-FENNCKEKIDSEHEQFAELTNKIKAEISD--DKLNDYEKKFNDSKSLINEINKSIEEEY 910
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1283 EKINSLYGQNQKIK------DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTK--TVND 1354
Cdd:TIGR01612 911 QNINTLKKVDEYIKicentkESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKdaSLND 990
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1355 HTSKVRDLTSQVRHLEDELADTKGNLVQKEMD--LESTQNRLRSLEDQ-----------HSTLQSDANKWRGEL--DAAL 1419
Cdd:TIGR01612 991 YEAKNNELIKYFNDLKANLGKNKENMLYHQFDekEKATNDIEQKIEDAnknipnieiaiHTSIYNIIDEIEKEIgkNIEL 1070
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1420 RENDILKSNNTNMeTDLTRLKNRLK-------------SAEDALKELKNSLSHAKTEKERLQNAFRE-KTKQADHLNQLA 1485
Cdd:TIGR01612 1071 LNKEILEEAEINI-TNFNEIKEKLKhynfddfgkeeniKYADEINKIKDDIKNLDQKIDHHIKALEEiKKKSENYIDEIK 1149
|
810 820
....*....|....*....|....*
gi 1845979720 1486 SQFdtkltklrNELQDTNDKLITSD 1510
Cdd:TIGR01612 1150 AQI--------NDLEDVADKAISND 1166
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1783-2227 |
1.17e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.62 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1783 ETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTD 1862
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1863 LDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT-NKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTD 1941
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1942 KLRRDLTKAESVENELRKTIdiqsktsheyqllkdqllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2021
Cdd:COG4913 384 ALRAEAAALLEALEEELEAL--------------------EEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2022 ELQRQLQDAnTEKNRVEDRFL---------------SVEKVVNTMRTT----------------ETDLRQQLETAKNEKR 2070
Cdd:COG4913 444 ALRDALAEA-LGLDEAELPFVgelievrpeeerwrgAIERVLGGFALTllvppehyaaalrwvnRLHLRGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2071 VATKELED--------------------LKRRLA------------QLENERRN---SSQLSDGW----KKEKITLL--- 2108
Cdd:COG4913 523 LPDPERPRldpdslagkldfkphpfrawLEAELGrrfdyvcvdspeELRRHPRAitrAGQVKGNGtrheKDDRRRIRsry 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2109 -------KKIELLENEKRRTDAAIRETALQREAIEKSLNAMEREnKELYKNCAQLQQQIAQ---------------LEME 2166
Cdd:COG4913 603 vlgfdnrAKLAALEAELAELEEELAEAEERLEALEAELDALQER-REALQRLAEYSWDEIDvasaereiaeleaelERLD 681
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 2167 NGNRILELTNKQREEQERQLIRMRQEKGQIEKvienRERTHRNRIKQLEDQIAILRDQLDG 2227
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKG----EIGRLEKELEQAEEELDELQDRLEA 738
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
623-1041 |
1.31e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.04 E-value: 1.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 623 QLERKLKIAESQVK------EFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 696
Cdd:pfam05483 210 RLEMHFKLKEDHEKiqhleeEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 697 ARKFLEDELAKLQASFQKSSTDDaRKLRDEMDEHTNSI---QEEFKTRIDELNR-----------------RVENLLR-E 755
Cdd:pfam05483 290 KKDHLTKELEDIKMSLQRSMSTQ-KALEEDLQIATKTIcqlTEEKEAQMEELNKakaahsfvvtefeattcSLEELLRtE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 756 NNRLKSEVNPLKDKYRDLE---NEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD---LREKYDRVHTDNEKILGELEHA 829
Cdd:pfam05483 369 QQRLEKNEDQLKIITMELQkksSELEEMTKFKNNKEVELEELKKILAEDEKLLDEkkqFEKIAEELKGKEQELIFLLQAR 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 830 QKAAHLAEQQLKEIKIQRDDYQKQKDeharhlfDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISD-------YESQ 902
Cdd:pfam05483 449 EKEIHDLEIQLTAIKTSEEHYLKEVE-------DLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDmtlelkkHQED 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 903 INLLRRHNDELDTTIKGHQGKITHLENELHS-RSGEIEKLNDLNQRLQKEKQDILN----------QKLKLDGDVQALKE 971
Cdd:pfam05483 522 IINCKKQEERMLKQIENLEEKEMNLRDELESvREEFIQKGDEVKCKLDKSEENARSieyevlkkekQMKILENKCNNLKK 601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 972 TIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDvNKQLEQDIRDLKE 1041
Cdd:pfam05483 602 QIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIID-NYQKEIEDKKISE 670
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
832-1064 |
1.45e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 832 AAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND 911
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 912 ELDTTIKGHQGKITHLENELHsRSGEIEKLNDLNQrlQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELV 991
Cdd:COG4942 94 ELRAELEAQKEELAELLRALY-RLGRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 992 GKEARARDAANQQLSRANLLNKE-------LEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGA 1064
Cdd:COG4942 171 AERAELEALLAELEEERAALEALkaerqklLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
793-1542 |
1.57e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.04 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 793 YSDDIRRNIQKDLDDLREKYDRVHTDNEKILG-----ELEHAQKAAHLAEQQlKEIKIQRDDYQKQKDEHARhlfdIRHK 867
Cdd:pfam05483 61 YQEGLKDSDFENSEGLSRLYSKLYKEAEKIKKwkvsiEAELKQKENKLQENR-KIIEAQRKAIQELQFENEK----VSLK 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 868 LETEIKGRQDLEKNGARNNDELDKLRQT-------ISDYESQINLLRR----HNDELDTTIKGHQGKITHLEN---ELHS 933
Cdd:pfam05483 136 LEEEIQENKDLIKENNATRHLCNLLKETcarsaekTKKYEYEREETRQvymdLNNNIEKMILAFEELRVQAENarlEMHF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 934 RSGE-IEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLN 1012
Cdd:pfam05483 216 KLKEdHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLT 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1013 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKggrisrdsttgtdggafgDRSSVADPSRTRGAAGSTVFVPAaed 1092
Cdd:pfam05483 296 KELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTE------------------EKEAQMEELNKAKAAHSFVVTEF--- 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1093 iesrgggEIDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTKERIERIEKNILDRYHDDELVEHKirevndRWKRELERLE 1172
Cdd:pfam05483 355 -------EATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELK------KILAEDEKLL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1173 NEKDDLERRIREL---EDELSQIGRGNDKTEND-------ITELKRKHAAEIDKLKSDisaLHDKHLSDLDDEKEQYGKA 1242
Cdd:pfam05483 422 DEKKQFEKIAEELkgkEQELIFLLQAREKEIHDleiqltaIKTSEEHYLKEVEDLKTE---LEKEKLKNIELTAHCDKLL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1243 VENlKSVEDDLRDKLNNLEKQLADSLNRENELEREKRdydeKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRS 1322
Cdd:pfam05483 499 LEN-KELTQEASDMTLELKKHQEDIINCKKQEERMLK----QIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1323 EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLtsqvrHLEDELADTKGNLVQKEMDLESTQNRLRSLEdqhs 1402
Cdd:pfam05483 574 NARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEEL-----HQENKALKKKGSAENKQLNAYEIKVNKLELE---- 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1403 tLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEkerlQNAFREKTKQadHLN 1482
Cdd:pfam05483 645 -LASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAE----MVALMEKHKH--QYD 717
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1483 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1542
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1167-1600 |
1.88e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRELEDELSQ----IGRGNDKTEN---DITEL------KRKHAAEIDK-LKSDISALHDKH--LS 1230
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEEcrvaAQAHNEEAESlreDADDLeeraeeLREEAAELESeLEEAREAVEDRReeIE 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1231 DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINslygQNQKIKDEWDDFRNDADKEI 1310
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVE----EAEALLEAGKCPECGQPVEG 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1311 QKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVndhtskvrDLTSQVRHLEDELADTKGNLVQKEMDLEST 1390
Cdd:PRK02224 464 SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLV--------EAEDRIERLEERREDLEELIAERRETIEEK 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1391 QNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAKTEKERLQNa 1470
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI----ESLERIRTLLAAIADAEDEIER- 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1471 FREKTKQADHLNQlasQFDTKLTKLRNELQDTNDKLitsDTER-NALRNELQKLSQELkfgnEQIQRKSDEYQTTIDDLA 1549
Cdd:PRK02224 611 LREKREALAELND---ERRERLAEKRERKRELEAEF---DEARiEEAREDKERAEEYL----EQVEEKLDELREERDDLQ 680
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1550 HSHRVSEDSrLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSE 1600
Cdd:PRK02224 681 AEIGAVENE-LEELEELRERREALENRVEALEALYDEAEELESMYGDLRAE 730
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1148-2092 |
2.20e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.52 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1148 HDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELsqigrgndktenDITELKRKHAAEIDKLKSDIsalhdk 1227
Cdd:pfam02463 158 IEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQE------------LKLKEQAKKALEYYQLKEKL------ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1228 hlsdldDEKEQYGKAVENLKSVED--DLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND 1305
Cdd:pfam02463 220 ------ELEEEYLLYLDYLKLNEEriDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1306 ADKEiqkwktdaytVRSEAKALETTNTALKAQLQAANDRIDHLTKtvndHTSKVRDLTSQVRHLEDELADTKGNLVQKEM 1385
Cdd:pfam02463 294 EEEE----------LKSELLKLERRKVDDEEKLKESEKEKKKAEK----ELKKEKEEIEELEKELKELEIKREAEEEEEE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1386 DLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKsaEDALKELKNSLSHAKTEKE 1465
Cdd:pfam02463 360 ELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLE--DLLKEEKKEELEILEEEEE 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1466 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLsQELKFGNEQIQRKSDEYQTTI 1545
Cdd:pfam02463 438 SIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKL-EERSQKESKARSGLKVLLALI 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1546 DDLAHSHRVSEDSRLNALQELEArkyeiNDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSsaNRVINFHTFV 1625
Cdd:pfam02463 517 KDGVGGRIISAHGRLGDLGVAVE-----NYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARK--LRLLIPKLKL 589
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1626 DGGAGYVDGVpggtsvigggpsaqrsgayDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADF 1705
Cdd:pfam02463 590 PLKSIAVLEI-------------------DPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRK 650
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1706 SSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLarmkkKTTETHTTINQKETR 1785
Cdd:pfam02463 651 GVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKE-----ELKKLKLEAEELLAD 725
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1786 YRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLrtdldn 1865
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQ------ 799
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1866 ahtdIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLqiasfESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRR 1945
Cdd:pfam02463 800 ----EEELRALEEELKEEAELLEEEQLLIEQEEKIKEE-----ELEELALELKEEQKLEKLAEEELERLEEEITKEELLQ 870
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1946 DLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQ--NELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSEL 2023
Cdd:pfam02463 871 ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQklNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEK 950
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2024 QRQ-LQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRN 2092
Cdd:pfam02463 951 EENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1912-2092 |
2.23e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 56.31 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1912 RQILTEKI-KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN---- 1986
Cdd:COG4717 44 RAMLLERLeKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEklek 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1987 -----GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRF----LSVEKVVNTMRTTETD 2057
Cdd:COG4717 124 llqllPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLeqlsLATEEELQDLAEELEE 203
|
170 180 190
....*....|....*....|....*....|....*
gi 1845979720 2058 LRQQLETAKNEKRVATKELEDLKRRLAQLENERRN 2092
Cdd:COG4717 204 LQQRLAELEEELEEAQEELEELEEELEQLENELEA 238
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
645-902 |
2.35e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.54 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 645 ADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLR 724
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA--------ELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 725 DEMDEhtnsIQEEFKTRIDELNRRVENLLR--ENNRLKSEVNPlkdkyrdleNEYNSTQRRieeketqIRYSDDIRRNIQ 802
Cdd:COG4942 90 KEIAE----LRAELEAQKEELAELLRALYRlgRQPPLALLLSP---------EDFLDAVRR-------LQYLKYLAPARR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 803 KDLDDLREKYDRVHTDNEKIlgELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNG 882
Cdd:COG4942 150 EQAEELRADLAELAALRAEL--EAERAELEALLAELE-----EERAALEALKAERQKLLARLEKELAELAAELAELQQEA 222
|
250 260
....*....|....*....|
gi 1845979720 883 ARNNDELDKLRQTISDYESQ 902
Cdd:COG4942 223 EELEALIARLEAEAAAAAER 242
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
784-1130 |
2.48e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.61 E-value: 2.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 784 IEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFd 863
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 864 irhkleteikgrqdleKNGaRNNDELDKL--RQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKL 941
Cdd:COG3883 97 ----------------RSG-GSVSYLDVLlgSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 942 NDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQD 1021
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1022 LKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEI 1101
Cdd:COG3883 240 AAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGA 319
|
330 340
....*....|....*....|....*....
gi 1845979720 1102 DIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1130
Cdd:COG3883 320 GAVVGGASAGGGGGSGGGGGSSGGGSGGG 348
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
513-979 |
2.75e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.10 E-value: 2.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 513 EGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTR 592
Cdd:COG1196 301 EQDIARLEERRRELEERLEE---LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 593 SlspgktplppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 672
Cdd:COG1196 378 E-----------EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 673 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSST----------------------------------- 717
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAArllllleaeadyegflegvkaalllaglrglagav 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 718 ----DDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENN--------------RLKSEVNPLKDKYRDLENEYNS 779
Cdd:COG1196 527 avliGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflpldkiraRAALAAALARGAIGAAVDLVAS 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 780 TQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHAR 859
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 860 HLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQG-----------KITHLE 928
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEeealeelpeppDLEELE 766
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 929 NELHSRSGEIEKLNDLN-------QRLQKEKQDILNQKLKLDGDVQALKETIRKLENE 979
Cdd:COG1196 767 RELERLEREIEALGPVNllaieeyEELEERYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1797-2217 |
2.78e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.28 E-value: 2.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1797 EEERRALESRLQSAKTLLRSQ-----EEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTdldnahTDIR 1871
Cdd:pfam15921 244 EDQLEALKSESQNKIELLLQQhqdriEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNS------MYMR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1872 SLRDKEeqwdSSRFQLETKMRESdsdtnkyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDltkAE 1951
Cdd:pfam15921 318 QLSDLE----STVSQLRSELREA-----------------KRMYEDKIEELEKQLVLANSELTEARTERDQFSQE---SG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1952 SVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNnrvSELQRQLQdan 2031
Cdd:pfam15921 374 NLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---SECQGQME--- 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2032 TEKNRVEDRFLSVEKVvntmrtteTDLRQQLETAKNEKRvatKELEDLKRRLAQLENERRNSSQLSDGwkkekitllkki 2111
Cdd:pfam15921 448 RQMAAIQGKNESLEKV--------SSLTAQLESTKEMLR---KVVEELTAKKMTLESSERTVSDLTAS------------ 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2112 elLENEKRRTDAAIRETALQREAIEKSLNAMER-ENKELYKNCAQLQQQIAQLEMENGNRILELTNKQRE-------EQE 2183
Cdd:pfam15921 505 --LQEKERAIEATNAEITKLRSRVDLKLQELQHlKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIEnmtqlvgQHG 582
|
410 420 430
....*....|....*....|....*....|....
gi 1845979720 2184 RQLIRMRQEKGQIEKVIENReRTHRNRIKQLEDQ 2217
Cdd:pfam15921 583 RTAGAMQVEKAQLEKEINDR-RLELQEFKILKDK 615
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1167-1535 |
3.75e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 55.52 E-value: 3.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRE----LEDELSQIGRGNDKTENDITELKRKHAAEIDKLKsdisaLHDKHLSDLDDEKEQYGKA 1242
Cdd:pfam05557 87 ALNKKLNEKESQLADAREviscLKNELSELRRQIQRAELELQSTNSELEELQERLD-----LLKAKASEAEQLRQNLEKQ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1243 VENLKSVEDDLRDKLNNLEKQLADSLNREN---------ELEREK---RDYDEKINSLYGQNQKIKDEWDDFRNDADKEI 1310
Cdd:pfam05557 162 QSSLAEAEQRIKELEFEIQSQEQDSEIVKNskselaripELEKELerlREHNKHLNENIENKLLLKEEVEDLKRKLEREE 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1311 QkwktdaytVRSEAKALETTNTALKAQLQ-----------------AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDEL 1373
Cdd:pfam05557 242 K--------YREEAATLELEKEKLEQELQswvklaqdtglnlrspeDLSRRIEQLQQREIVLKEENSSLTSSARQLEKAR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1374 ADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSdankwrgELDAALRENDILKSNNTNMETDLT------RLKNRLKSAE 1447
Cdd:pfam05557 314 RELEQELAQYLKKIEDLNKKLKRHKALVRRLQR-------RVLLLTKERDGYRAILESYDKELTmsnyspQLLERIEEAE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1448 DALKELKNSLSHAKTekeRLQNAFREKTKQadhlNQLASQFDTKLTKLRNElQDTNDKLITSDtERNALRNELQKLSQEL 1527
Cdd:pfam05557 387 DMTQKMQAHNEEMEA---QLSVAEEELGGY----KQQAQTLERELQALRQQ-ESLADPSYSKE-EVDSLRRKLETLELER 457
|
....*...
gi 1845979720 1528 KFGNEQIQ 1535
Cdd:pfam05557 458 QRLREQKN 465
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1737-2221 |
4.35e-07 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 55.60 E-value: 4.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1737 IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTT------INQKETRYRNIEDNLQDAEEERRALESrlqSA 1810
Cdd:pfam10174 187 IAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKTkalqtvIEMKDTKISSLERNIRDLEDEVQMLKT---NG 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1811 KTLLRSQEEALKQRDEERRQ---MKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA--HTDI--RSLRDKEE----- 1878
Cdd:pfam10174 264 LLHTEDREEEIKQMEVYKSHskfMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCkqHIEVlkESLTAKEQraail 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1879 --QWDSSRFQLETKmresDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1956
Cdd:pfam10174 344 qtEVDALRLRLEEK----ESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAG 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1957 LRKTI-DIQSKTSHeyqllKDQLLNTQNELNGANNR-----KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA 2030
Cdd:pfam10174 420 LKERVkSLQTDSSN-----TDTALTTLEEALSEKERiierlKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEK 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2031 NTEKN--------------RVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKElEDLKRRLAQLENERRNSSQL 2096
Cdd:pfam10174 495 ESSLIdlkehasslassglKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTN-PEINDRIRLLEQEVARYKEE 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2097 SDGWKKEKITLLKKIELLENEKRRTDAAIRE-------------------TALQREAIEKSLNAME---RENKELYKNCA 2154
Cdd:pfam10174 574 SGKAQAEVERLLGILREVENEKNDKDKKIAElesltlrqmkeqnkkvaniKHGQQEMKKKGAQLLEearRREDNLADNSQ 653
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 2155 QLQQQIAQLEMENGNRILELTnKQR--------EEQERQLIRMRQE-KGQIEKVIENRERTHRNRIKQLEDQIAIL 2221
Cdd:pfam10174 654 QLQLEELMGALEKTRQELDAT-KARlsstqqslAEKDGHLTNLRAErRKQLEEILEMKQEALLAAISEKDANIALL 728
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
556-931 |
4.44e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.82 E-value: 4.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 556 RNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIK-RTRSLSPGKTPLPPSE------ALRAVRNTFRNKDNDIQQLERKL 628
Cdd:TIGR00606 688 QTEAELQEFISDLQSKLRLAPDKLKSTESELKKKeKRRDEMLGLAPGRQSIidlkekEIPELRNKLQKVNRDIQRLKNDI 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 629 KIAESQVKEFLNKFENADEAR------RRLDKQFADAKREI---------SNLQKSVDEAERNSRRTDDKLRASEAErva 693
Cdd:TIGR00606 768 EEQETLLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIaqqaaklqgSDLDRTVQQVNQEKQEKQHELDTVVSK--- 844
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 694 AEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEHTNSIQEeFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDL 773
Cdd:TIGR00606 845 IELNRKLIQDQQEQIQH--LKSKTNELKSEKLQIGTNLQRRQQ-FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 774 ENEynsTQRRIEEKETQIRYSDDIRRNIQKDLDDLR------EKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 847
Cdd:TIGR00606 922 QQE---KEELISSKETSNKKAQDKVNDIKEKVKNIHgymkdiENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINE 998
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 848 DDYQKQKDEHARHLFD-------IRHKLETEIKGRQDLEKN--GARNNDELDKLRQTISDYESQINLLRRHNDELDTTIK 918
Cdd:TIGR00606 999 DMRLMRQDIDTQKIQErwlqdnlTLRKRENELKEVEEELKQhlKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQK 1078
|
410
....*....|...
gi 1845979720 919 GHQGKITHLENEL 931
Cdd:TIGR00606 1079 GYEKEIKHFKKEL 1091
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1733-2132 |
4.73e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 4.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1733 GGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQ-KETRYRNIEDNLQDAEEERRALesrLQSAK 1811
Cdd:PRK03918 382 TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElKKAKGKCPVCGRELTEEHRKEL---LEEYT 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1812 TLLRSQEEALKQRDEERRQMKSKMVAAE--LQARGKEAQLRHLNEQLKNLRTDLDNahTDIRSLRDKEEQWdssrfqlet 1889
Cdd:PRK03918 459 AELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKK--YNLEELEKKAEEY--------- 527
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1890 kmRESDSDTNKYQLQIASFESErqilTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA--ESVEnELRKTIDIQSKT 1967
Cdd:PRK03918 528 --EKLKEKLIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLDELEEELAELLKELEELgfESVE-ELEERLKELEPF 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1968 SHEYQLLKdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDanTEKNRVEDRFLSVEKV 2047
Cdd:PRK03918 601 YNEYLELK----DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRE 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2048 VntmrtteTDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLsdgwkkEKItlLKKIELLENEKRRTDAAIRE 2127
Cdd:PRK03918 675 L-------AGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKL------EKA--LERVEELREKVKKYKALLKE 739
|
....*
gi 1845979720 2128 TALQR 2132
Cdd:PRK03918 740 RALSK 744
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1750-2202 |
4.82e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 4.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1750 KIEKLEMERNELRDTLARMKKKTTethttinQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR 1829
Cdd:pfam01576 132 KIKKLEEDILLLEDQNSKLSKERK-------LLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1830 QMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFE 1909
Cdd:pfam01576 205 ELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESER 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1910 SERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKtSHEYQL-------------LKD 1976
Cdd:pfam01576 285 AARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETR-SHEAQLqemrqkhtqaleeLTE 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1977 QLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTeknrvedRFLSVEKVVNTMRTTET 2056
Cdd:pfam01576 364 QLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQA-------RLSESERQRAELAEKLS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2057 DLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIE 2136
Cdd:pfam01576 437 KLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVE 516
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 2137 KSLNAMERENKELYKNCAQLQQQIAQLE--MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIEN 2202
Cdd:pfam01576 517 RQLSTLQAQLSDMKKKLEEDAGTLEALEegKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDD 584
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
479-872 |
4.98e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 4.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 479 IETIKRMNGTGGAGSASSADLLEELRKIRGGG---SSEGDAELHKELMTKYEESIERnieLESRGDDSQRKIAELEAELR 555
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAKGKCpvcGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELR 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 556 RNREKLNEaQGALKKLHEMAqDSEKNVDGTVSIKRTRSLSPGktplppSEALRAVRNTFRNKDNDIQQLERKLKiaesQV 635
Cdd:PRK03918 484 ELEKVLKK-ESELIKLKELA-EQLKELEEKLKKYNLEELEKK------AEEYEKLKEKLIKLKGEIKSLKKELE----KL 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 636 KEFLNKFENADEARRRLDKQFADAKREISNLQ-KSVDEAERNSRRtddkLRASEAERVAAEKARKFLEDELAKLQasfqk 714
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKE----LEPFYNEYLELKDAEKELEREEKELK----- 622
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 715 sstddarKLRDEMDEHTNSIQEEFKtRIDELNRRVENLLRENNrlksevnplKDKYRDLENEYNSTQRRIEEKETQIRYS 794
Cdd:PRK03918 623 -------KLEEELDKAFEELAETEK-RLEELRKELEELEKKYS---------EEEYEELREEYLELSRELAGLRAELEEL 685
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 795 DDIRRNIQKDLDDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEI 872
Cdd:PRK03918 686 EKRREEIKKTLEKLKEE-----------LEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
335-1014 |
5.48e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.53 E-value: 5.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 335 EERRRSDEYRMQWENERQKSLSLED--ENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRK 412
Cdd:PTZ00121 1312 EEAKKADEAKKKAEEAKKKADAAKKkaEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 413 QFSDLKTHTEEDldKQKAEFTR----AIRNVNNISRNAAFSAGAGDglglygLEDGGDVNRTTNNYEKVFIETIKRMNGT 488
Cdd:PTZ00121 1392 KADEAKKKAEED--KKKADELKkaaaAKKKADEAKKKAEEKKKADE------AKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 489 GGAGSASSADLL----EELRKIRGGGSSEGDAELHKELMTKYEESIERNIEL----ESRGDDSQRKIAEL-EAELRRNRE 559
Cdd:PTZ00121 1464 KKAEEAKKADEAkkkaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAkkaeEAKKADEAKKAEEAkKADEAKKAE 1543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 560 KLNEAQgALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTP-LPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVK- 636
Cdd:PTZ00121 1544 EKKKAD-ELKKAEELKKAEEkKKAEEAKKAEEDKNMALRKAEeAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKa 1622
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 637 EFLNKFENADEARRRLDKQFADAKREISNLQKsvdEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSs 716
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKK---AEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEA- 1698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 717 tDDARKLrdemdehtnsiqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRdlENEYNSTQRRIEEKEtqirysdd 796
Cdd:PTZ00121 1699 -EEAKKA------------EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE--EDKKKAEEAKKDEEE-------- 1755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 797 iRRNIQKDLDDLREKYDRVHTDNEKILGE--LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKG 874
Cdd:PTZ00121 1756 -KKKIAHLKKEEEKKAEEIRKEKEAVIEEelDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKE 1834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 875 RQD-----------LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHsrsgeieklnd 943
Cdd:PTZ00121 1835 VADsknmqleeadaFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIP----------- 1903
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 944 lNQRLQKEKQDILNQKLKLDgdvQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKE 1014
Cdd:PTZ00121 1904 -NNNMAGKNNDIIDDKLDKD---EYIKRDAEETREEIIKISKKDMCINDFSSKFCDYMKDNISSGNCSDEE 1970
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1796-2043 |
6.05e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 6.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1796 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR- 1874
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRa 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1875 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFEserqiltekikELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVE 1954
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFL-----------DAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1955 NELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELlnvRSEVRDYKQRVHDVNNRVSELQRQLQDANTEK 2034
Cdd:COG4942 167 AELEAERA-------ELEALLAELEEERAALEALKAERQKLLARL---EKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1845979720 2035 NRVEDRFLS 2043
Cdd:COG4942 237 AAAAERTPA 245
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
740-908 |
6.84e-07 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 52.62 E-value: 6.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 740 TRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIrysDDIRRNIQKDlddlREKYDRVHTDN 819
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI---EEVEARIKKY----EEQLGNVRNNK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 820 E--KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEikgRQDLEKNGARNNDELDKLRQTIS 897
Cdd:COG1579 90 EyeALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK---KAELDEELAELEAELEELEAERE 166
|
170
....*....|...
gi 1845979720 898 DYESQI--NLLRR 908
Cdd:COG1579 167 ELAAKIppELLAL 179
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1149-1540 |
7.23e-07 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 53.92 E-value: 7.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1149 DDELVEHKIREVNDRWkRELERL-----------ENEKDDLER---RIRELEDELSQIGRGNDKTENDITELKRKHAAei 1214
Cdd:pfam19220 4 RNELLRVRLGEMADRL-EDLRSLkadfsqliepiEAILRELPQaksRLLELEALLAQERAAYGKLRRELAGLTRRLSA-- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1215 dkLKSDISALhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSlygqnqk 1294
Cdd:pfam19220 81 --AEGELEEL-VARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQA------- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1295 ikdewddfrndADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1374
Cdd:pfam19220 151 -----------AEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1375 DTKG----NLVQKEMDLESTQNRLRSLEDQHSTLQSDAN---KWRGELDAALREND--ILKSNNTNMETDLTRlknrlKS 1445
Cdd:pfam19220 220 AEQAererAEAQLEEAVEAHRAERASLRMKLEALTARAAateQLLAEARNQLRDRDeaIRAAERRLKEASIER-----DT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1446 AEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ 1525
Cdd:pfam19220 295 LERRLAGLEADLERRTQQFQEMQRARAELEERAEMLTKALAAKDAALERAEERIASLSDRIAELTKRFEVERAALEQANR 374
|
410
....*....|....*
gi 1845979720 1526 ELKfgnEQIQRKSDE 1540
Cdd:pfam19220 375 RLK---EELQRERAE 386
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1793-2016 |
8.04e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.92 E-value: 8.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1793 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERR--QMKSKMVAAELQARGKEAQLRHLNEQLKnlrtDLDNAHTDI 1870
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAELE----RLDASSDDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1871 RSLRDKEEQWdssrfqletkmresdsdtnkyqlqiasfESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1950
Cdd:COG4913 688 AALEEQLEEL----------------------------EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 1951 ES-VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSE-VRDYKQRVHDV 2016
Cdd:COG4913 740 EDlARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADL 807
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1169-2148 |
8.49e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.67 E-value: 8.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1169 ERLENEKDDLERRIRELEDELSQIgrgnDKTENDITELKrKHAAEIDKLKSDISALHDKHLSDLDDE-KEQYGKAVENLK 1247
Cdd:TIGR00606 241 KSYENELDPLKNRLKEIEHNLSKI----MKLDNEIKALK-SRKKQMEKDNSELELKMEKVFQGTDEQlNDLYHNHQRTVR 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1248 SVEDDLRDKLNNLEKqladsLNRE-NELEREKRDYDEKINSLYGQNQKIKDEWDDFrndaDKEIQKWKTdaytvRSEAKA 1326
Cdd:TIGR00606 316 EKERELVDCQRELEK-----LNKErRLLNQEKTELLVEQGRLQLQADRHQEHIRAR----DSLIQSLAT-----RLELDG 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1327 LE-------TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLED 1399
Cdd:TIGR00606 382 FErgpfserQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIK 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1400 QHSTLQSDANKWRgELDAALRENDI---LKSNNTNMETDLTRLKNRLKSAEDALKELKN------SLSHAKTEKERLQNA 1470
Cdd:TIGR00606 462 ELQQLEGSSDRIL-ELDQELRKAERelsKAEKNSLTETLKKEVKSLQNEKADLDRKLRKldqemeQLNHHTTTRTQMEML 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1471 FREKTKQADHLNQLASQFDTKLTKLrneLQDTNDKLITSDTernalrneLQKLSQELKFGNEQIQRKSDEYQtTIDDLAH 1550
Cdd:TIGR00606 541 TKDKMDKDEQIRKIKSRHSDELTSL---LGYFPNKKQLEDW--------LHSKSKEINQTRDRLAKLNKELA-SLEQNKN 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1551 SHRVSEDSRLNALQELEARKYEIndltSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSsanrvinfhtfvdggag 1630
Cdd:TIGR00606 609 HINNELESKEEQLSSYEDKLFDV----CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQ----------------- 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1631 YVDGVPGGTSviGGGPSAQRsgaydpssggvigsgisggpggsDFGREIEIGRGDSDQSDVAypRSVPfppsadfssgrp 1710
Cdd:TIGR00606 668 FITQLTDENQ--SCCPVCQR-----------------------VFQTEAELQEFISDLQSKL--RLAP------------ 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1711 gaasaggrviNNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIE 1790
Cdd:TIGR00606 709 ----------DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIM 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1791 DNLQDAEEerralesrLQSAKTLLRSQEEALKQRDEERRQMkskmvAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDI 1870
Cdd:TIGR00606 779 PEEESAKV--------CLTDVTIMERFQMELKDVERKIAQQ-----AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKI 845
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1871 RSLRDKEEQWDSSRFQLETKMRESDSDtnkyQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDtdklrrDLTKA 1950
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSE----KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ------DSPLE 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1951 ESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEllnVRSEVRDYKQrvhDVNNRVSELQRQLQDA 2030
Cdd:TIGR00606 916 TFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENK---IQDGKDDYLK---QKETELNTVNAQLEEC 989
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2031 NTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEkrvatKELEDLKRRLAQLENERRNSSQLSDgwKKEKITLLKK 2110
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRE-----NELKEVEEELKQHLKEMGQMQVLQM--KQEHQKLEEN 1062
|
970 980 990
....*....|....*....|....*....|....*...
gi 1845979720 2111 IELLENEKRRTDAAIRETALQREAIEKSLNAMERENKE 2148
Cdd:TIGR00606 1063 IDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1738-2215 |
9.30e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.74 E-value: 9.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1738 ANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINqketryrNIEDNLQDAEEERRALESRLQSAKTllrsq 1817
Cdd:pfam15921 373 GNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITID-------HLRRELDDRNMEVQRLEALLKAMKS----- 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1818 eealkqrdEERRQMKSKMVAAElqarGKEAQLrhlnEQLKNLRTDLDNAHtdiRSLRDKEEQWDSSRFQLETKMRESDSD 1897
Cdd:pfam15921 441 --------ECQGQMERQMAAIQ----GKNESL----EKVSSLTAQLESTK---EMLRKVVEELTAKKMTLESSERTVSDL 501
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1898 TNKYQlqiasfESERQI--LTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELrktidiqSKTSHEYQLLK 1975
Cdd:pfam15921 502 TASLQ------EKERAIeaTNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQM-------AEKDKVIEILR 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLLNtQNELNGANNR--------KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKV 2047
Cdd:pfam15921 569 QQIEN-MTQLVGQHGRtagamqveKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRA 647
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2048 VNTMRTTETDLRQQLETAKNEKRVATKELEDLKRrlaqleNERRNSSQLSDGWKKEKITL---LKKIELLENEKRRTDAA 2124
Cdd:pfam15921 648 VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKR------NFRNKSEEMETTTNKLKMQLksaQSELEQTRNTLKSMEGS 721
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2125 IRETALQREAIEKSLNAMERENKELykncaQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIE---KVIE 2201
Cdd:pfam15921 722 DGHAMKVAMGMQKQITAKRGQIDAL-----QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAgelEVLR 796
|
490
....*....|....
gi 1845979720 2202 NRERTHRNRIKQLE 2215
Cdd:pfam15921 797 SQERRLKEKVANME 810
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1260-1568 |
9.39e-07 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 54.13 E-value: 9.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1260 LEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQ 1339
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1340 AANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAAL 1419
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1420 RENDILKSNNTNMET-------DLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFD--- 1489
Cdd:pfam07888 192 KEFQELRNSLAQRDTqvlqlqdTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDrtq 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1490 TKLTKLRNELQDTNDKLITSD-----------TERNALRN-------ELQKLSQELKFGNEQIQRKSDEYQTTIDDLAH- 1550
Cdd:pfam07888 272 AELHQARLQAAQLTLQLADASlalregrarwaQERETLQQsaeadkdRIEKLSAELQRLEERLQEERMEREKLEVELGRe 351
|
330 340
....*....|....*....|
gi 1845979720 1551 --SHRVSEDSRLNALQELEA 1568
Cdd:pfam07888 352 kdCNRVQLSESRRELQELKA 371
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1736-2159 |
1.11e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.17 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLR 1815
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1816 SQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESD 1895
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1896 SDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKV----------QDMKDDTDKLRRDLTKAESVENELRKTIDIQS 1965
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELaeaaarllllLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1966 KTSHEY-----------------------------QLLKDQLLN----------TQNELNGANNRKQQLENELLNVRSEV 2006
Cdd:COG1196 529 LIGVEAayeaaleaalaaalqnivveddevaaaaiEYLKAAKAGratflpldkiRARAALAAALARGAIGAAVDLVASDL 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2007 RDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTM-------RTTETDLRQQLETAKNEKRVATKELEDL 2079
Cdd:COG1196 609 READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGeggsaggSLTGGSRRELLAALLEAEAELEELAERL 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2080 KRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQ 2159
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1166-1617 |
1.39e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1166 RELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA----AEIDKLKSDISALH-------------DKH 1228
Cdd:COG4913 288 RRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLEreleererrrarlEAL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1229 LSDLD----DEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRN 1304
Cdd:COG4913 368 LAALGlplpASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRD 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1305 DADKEIQKWKTDAY------TVRSEAK----ALETT--NTAL-----KAQLQAANDRIDHLTKTVNDHTSKVRDLTS--- 1364
Cdd:COG4913 448 ALAEALGLDEAELPfvgeliEVRPEEErwrgAIERVlgGFALtllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPdpe 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1365 QVRHLEDELA---DTKGN--------LVQKEMDLESTQNrLRSLEDQH----STLQSDANKWRGELDA--ALRENDILKS 1427
Cdd:COG4913 528 RPRLDPDSLAgklDFKPHpfrawleaELGRRFDYVCVDS-PEELRRHPraitRAGQVKGNGTRHEKDDrrRIRSRYVLGF 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1428 NNtnmetdltrlKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQF---------DTKLTKLRNE 1498
Cdd:COG4913 607 DN----------RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSwdeidvasaEREIAELEAE 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1499 LQD---TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHS----HRVSEDSRLNALQELEARKY 1571
Cdd:COG4913 677 LERldaSSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqdrlEAAEDLARLELRALLEERFA 756
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1845979720 1572 EINDltsrlDSTEQRL-ATLQQDYIKADSERDILSDALRRFQSSANR 1617
Cdd:COG4913 757 AALG-----DAVERELrENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1787-1996 |
1.43e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.87 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1787 RNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALkqrdeERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNA 1866
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAAL-----EEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1867 HTDIRSLRDKEEQWDSSRFQLetkmrESDSDTNKYQLQIASFESERQILT--------------EKIKELDGALR-LSDS 1931
Cdd:COG3206 239 EARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELAELSarytpnhpdvialrAQIAALRAQLQqEAQR 313
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1932 KVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE 1996
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
535-1023 |
1.61e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 535 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaqdseknvdgtvsikrtrslspgktplppsealravrntf 614
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE----------------------------------------- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 615 rnKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLD--KQFADAKREISNLQKSVDEaernsrrtddkLRASEAERV 692
Cdd:COG4717 93 --LQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEE-----------LEERLEELR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 693 AAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRD 772
Cdd:COG4717 160 ELEEELEELEAELAELQE--------ELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 773 LENEYNSTQ--RRIEEKETQIR----------YSDDIRRNIQKDLD----------DLREKYDRVHTDNEKILGELEHAQ 830
Cdd:COG4717 232 LENELEAAAleERLKEARLLLLiaaallallgLGGSLLSLILTIAGvlflvlgllaLLFLLLAREKASLGKEAEELQALP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 831 KAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEK--NGARNNDELDKLRQ-----TISDYESQI 903
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEelQLEELEQEIAALLAeagveDEEELRAAL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 904 NLLRRHNDEldttikghQGKITHLENELHSRSGEIEKLNDLNQ--RLQKEKQDILNQKLKLDGDVQALKETIRKLENELE 981
Cdd:COG4717 392 EQAEEYQEL--------KEELEELEEQLEELLGELEELLEALDeeELEEELEELEEELEELEEELEELREELAELEAELE 463
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1845979720 982 KLRNENK------ELVGKEARARDAAnQQLSRANLLNKELEDTKQDLK 1023
Cdd:COG4717 464 QLEEDGElaellqELEELKAELRELA-EEWAALKLALELLEEAREEYR 510
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1127-1591 |
1.69e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 53.69 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1127 HTITNTKERIERIEKNILDRYH-DDELVEHKIREvndrwKRELERLENEKDDLERRIRELEDELSQIgrgNDKTENDITE 1205
Cdd:pfam12128 241 PEFTKLQQEFNTLESAELRLSHlHFGYKSDETLI-----ASRQEERQETSAELNQLLRTLDDQWKEK---RDELNGELSA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1206 LKrkhaAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlrdkLNNLEKQLADSLNRENELERE-------- 1277
Cdd:pfam12128 313 AD----AAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSE----LENLEERLKALTGKHQDVTAKynrrrski 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1278 KRDYDEKINSLYGQNQKIKDEWD---------------DFRNDADKEIQKWKTDAYTVRSEAKALE------TTNTALKA 1336
Cdd:pfam12128 385 KEQNNRDIAGIKDKLAKIREARDrqlavaeddlqalesELREQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1337 QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQ--------HSTLQSDA 1408
Cdd:pfam12128 465 QLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1409 NKWRGEL-----DAALRENDILKSNNTNM---ETDLTRLKNRLKSAE-----DALKELKNSLSHAKTEKERLQNAFREKT 1475
Cdd:pfam12128 545 PDWEQSIgkvisPELLHRTDLDPEVWDGSvggELNLYGVKLDLKRIDvpewaASEEELRERLDKAEEALQSAREKQAAAE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1476 KQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDL-AHSHR 1553
Cdd:pfam12128 625 EQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKaLAERKDSANERLNSLEAQLKQLDKKHqAWLEE 704
|
490 500 510
....*....|....*....|....*....|....*...
gi 1845979720 1554 VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQ 1591
Cdd:pfam12128 705 QKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARR 742
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
741-998 |
1.72e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 741 RIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKydrvhtdne 820
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE--------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 821 kilgelehaqkaahlAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYE 900
Cdd:COG4942 92 ---------------IAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 SQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL 980
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|....*...
gi 1845979720 981 EKLRNENKELVGKEARAR 998
Cdd:COG4942 237 AAAAERTPAAGFAALKGK 254
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1784-2227 |
1.78e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1784 TRYRNIEDNLQ--DAEEER-RALESRLqSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKE-----AQLRHLNEQ 1855
Cdd:PRK02224 150 DRQDMIDDLLQlgKLEEYReRASDARL-GVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESElaeldEEIERYEEQ 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1856 LKNLRTDLDNAHTDIRSLRDKEEQWDSsrfqLETKMRESDSDtnkyqlqIASFESERQILTEKIKELDGAL--------- 1926
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELET----LEAEIEDLRET-------IAETEREREELAEEVRDLRERLeeleeerdd 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1927 RLSDSKVQDMKDDTDKLRRDL--TKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRS 2004
Cdd:PRK02224 298 LLAEAGLDDADAEAVEARREEleDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEARE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2005 EVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATK---------- 2074
Cdd:PRK02224 378 AVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcpec 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2075 ------------------ELEDLKRRLAQLENERRNssqlsdgwKKEKITLLKkiELLENEKRRTDAAIRETALQREAIE 2136
Cdd:PRK02224 458 gqpvegsphvetieedreRVEELEAELEDLEEEVEE--------VEERLERAE--DLVEAEDRIERLEERREDLEELIAE 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2137 KSLNAMERENKELYKNCAQLQQQIAQLEMEngnrilELTNKQREEQERQLIRMRQEKGQIEKVIENRERThrNRIKQLED 2216
Cdd:PRK02224 528 RRETIEEKRERAEELRERAAELEAEAEEKR------EAAAEAEEEAEEAREEVAELNSKLAELKERIESL--ERIRTLLA 599
|
490
....*....|.
gi 1845979720 2217 QIAILRDQLDG 2227
Cdd:PRK02224 600 AIADAEDEIER 610
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1744-1921 |
2.01e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.46 E-value: 2.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1744 LQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQ 1823
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDE-------LAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1824 -RDE-ERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDkeeqwdssrfQLETKMRESDSDTNKY 1901
Cdd:COG1579 85 vRNNkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEA----------ELEEKKAELDEELAEL 154
|
170 180
....*....|....*....|
gi 1845979720 1902 QLQIASFESERQILTEKIKE 1921
Cdd:COG1579 155 EAELEELEAEREELAAKIPP 174
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1336-1594 |
2.16e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1336 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE-------------------------DELADTKGNLVQKEMDLEST 1390
Cdd:PRK04863 837 AELRQLNRRRVELERALADHESQEQQQRSQLEQAKeglsalnrllprlnlladetladrvEEIREQLDEAEEAKRFVQQH 916
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1391 QNRLRSLEDQHSTLQSDAnkwrgeldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSHAK--------T 1462
Cdd:PRK04863 917 GNALAQLEPIVSVLQSDP-----------EQFEQLKQDYQQAQQTQRDAKQQA----FALTEVVQRRAHFSyedaaemlA 981
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1463 EKERLQNAFREKTKQADhlnQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL-KFG-------NEQI 1534
Cdd:PRK04863 982 KNSDLNEKLRQRLEQAE---QERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELqDLGvpadsgaEERA 1058
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1535 QRKSDEyqttIDDLAHSHRvsedSRLNALQElearkyEINDLTSRLDSTEQRLATLQQDY 1594
Cdd:PRK04863 1059 RARRDE----LHARLSANR----SRRNQLEK------QLTFCEAEMDNLTKKLRKLERDY 1104
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
768-1001 |
2.20e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 768 DKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQR 847
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 848 DDYQKQKDEHARHLFDIrhkleteikGRQDLEKNGARNNDELDKLR-----QTISDY-ESQINLLRRHNDELDTTIKGHQ 921
Cdd:COG4942 100 EAQKEELAELLRALYRL---------GRQPPLALLLSPEDFLDAVRrlqylKYLAPArREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 922 GKITHLENELHSRSGEIEKLndlnQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAA 1001
Cdd:COG4942 171 AERAELEALLAELEEERAAL----EALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1162-1622 |
2.25e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1162 DRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGK 1241
Cdd:COG4913 341 EQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEA-LAEAEAALRDLRR 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1242 AVENLKSVEDDLRDKLNNLE-------KQLADSLN-RENEL--------------------ER-----------EKRDYD 1282
Cdd:COG4913 420 ELRELEAEIASLERRKSNIParllalrDALAEALGlDEAELpfvgelievrpeeerwrgaiERvlggfaltllvPPEHYA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1283 ---EKINSLYGQN----QKIKDEWDDFRND-------------ADKEIQKW-------KTDAYTVRSEAkALETTNTALK 1335
Cdd:COG4913 500 aalRWVNRLHLRGrlvyERVRTGLPDPERPrldpdslagkldfKPHPFRAWleaelgrRFDYVCVDSPE-ELRRHPRAIT 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1336 AQLQ--------AANDRIDHLTKTV--NDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLE--DQHST 1403
Cdd:COG4913 579 RAGQvkgngtrhEKDDRRRIRSRYVlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSW 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1404 LQSDANKWRGELDAALRENDILKSNNtnmeTDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHL-N 1482
Cdd:COG4913 659 DEIDVASAEREIAELEAELERLDASS----DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELqD 734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1483 QLASQFDTKLTKLRNELQDTNDKLITSDTE---RNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDS- 1558
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVErelRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESl 814
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1559 -----RLNALQE--LEARKYEINDLtsRLDSTEQRLATLQQDYikADSERDI------LSDALRRFQSSANRVINFH 1622
Cdd:COG4913 815 peylaLLDRLEEdgLPEYEERFKEL--LNENSIEFVADLLSKL--RRAIREIkeridpLNDSLKRIPFGPGRYLRLE 887
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1331-1592 |
2.53e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 52.38 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1331 NTALKAQLQAANDRIDHLtktvndhtskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLqsdank 1410
Cdd:pfam19220 5 NELLRVRLGEMADRLEDL-----------RSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKL------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1411 wRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdt 1490
Cdd:pfam19220 68 -RRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEE------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1491 KLTKLRNELQDTNDKLITSDTERNALRNELQKLSQEL--------KFGNE--QIQRKSDEYQTTIDdlAHSHRVSE-DSR 1559
Cdd:pfam19220 140 ENKALREEAQAAEKALQRAEGELATARERLALLEQENrrlqalseEQAAElaELTRRLAELETQLD--ATRARLRAlEGQ 217
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1845979720 1560 LNALQ------------ELEARKYEINDLTSRLDSTEQRLATLQQ 1592
Cdd:pfam19220 218 LAAEQaereraeaqleeAVEAHRAERASLRMKLEALTARAAATEQ 262
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
859-1004 |
2.67e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 51.08 E-value: 2.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 859 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLEN--ELHSRSG 936
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEALQK 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 937 EIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQ 1004
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1781-2149 |
2.93e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.87 E-value: 2.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1781 QKETRYRNIEDNLQDAEEERRALESRLQsAKTLLRSQEEALKQRDEERRQmKSKMVAAELQARGKEAQLRhlNEQLKNLR 1860
Cdd:pfam01576 23 KAESELKELEKKHQQLCEEKNALQEQLQ-AETELCAEAEEMRARLAARKQ-ELEEILHELESRLEEEEER--SQQLQNEK 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1861 TDLDNAHTDIRSLRDKEEQwDSSRFQLE-----TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQD 1935
Cdd:pfam01576 99 KKMQQHIQDLEEQLDEEEA-ARQKLQLEkvtteAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1936 MKDDTDK-------LRRDLTKAESVENELRK--------TIDIQSKTSHEYQL---LKDQLLNTQNELNGANNRKQQLEN 1997
Cdd:pfam01576 178 LSKLKNKheamisdLEERLKKEEKGRQELEKakrklegeSTDLQEQIAELQAQiaeLRAQLAKKEEELQAALARLEEETA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1998 ELLNVRSEVRdykqrvhDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRtteTDLRQQLETAKNEKRVATK--- 2074
Cdd:pfam01576 258 QKNNALKKIR-------ELEAQISELQEDLESERAARNKAEKQRRDLGEELEALK---TELEDTLDTTAAQQELRSKreq 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 2075 ELEDLKRRLAqlENERRNSSQLSDGWKKEKITLLKKIELLENEKRrtdaairetalQREAIEKSLNAMERENKEL 2149
Cdd:pfam01576 328 EVTELKKALE--EETRSHEAQLQEMRQKHTQALEELTEQLEQAKR-----------NKANLEKAKQALESENAEL 389
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1330-1617 |
3.07e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.99 E-value: 3.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1330 TNTALKAQLQAANDRIDHltkTVNDHTSkVRDLTSQVRHLeDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAn 1409
Cdd:PRK11281 37 TEADVQAQLDALNKQKLL---EAEDKLV-QQDLEQTLALL-DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDN- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1410 kwrgelDAALREnDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREktkqadhlNQlasqfd 1489
Cdd:PRK11281 111 ------DEETRE-TLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYA--------NS------ 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1490 TKLTKLRNELQDTND-KLITSDTERNALRNELQKLSQELKF------GNEQIQrksDEYQTTIDDLAHSHRVSEdSRLNA 1562
Cdd:PRK11281 170 QRLQQIRNLLKGGKVgGKALRPSQRVLLQAEQALLNAQNDLqrksleGNTQLQ---DLLQKQRDYLTARIQRLE-HQLQL 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1563 LQELearkyeINDltSRLDSTEQRLATLQQdyikADSERDILSDALRRFQSSANR 1617
Cdd:PRK11281 246 LQEA------INS--KRLTLSEKTVQEAQS----QDEAARIQANPLVAQELEINL 288
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
515-901 |
3.76e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.35 E-value: 3.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 515 DAELHKELMTKYEESIErniELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGT-VSIKRTRS 593
Cdd:PRK02224 336 AAQAHNEEAESLREDAD---DLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDApVDLGNAED 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 594 LspgktplppSEALRAVRNTFRNKDNDiqqLERKLKIAESQVKE---------------------FLNKFENADEARRRL 652
Cdd:PRK02224 413 F---------LEELREERDELREREAE---LEATLRTARERVEEaealleagkcpecgqpvegspHVETIEEDRERVEEL 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 653 DKQFADAKREISNLQKSVDEAE------------RNSRRTDDKLRASEAERVAAEKAR-KFLEDELAKLQASFQKSStDD 719
Cdd:PRK02224 481 EAELEDLEEEVEEVEERLERAEdlveaedrierlEERREDLEELIAERRETIEEKRERaEELRERAAELEAEAEEKR-EA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 ARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLlrenNRLKSEVNPLKDKYRDLEneynstqrRIEEKETQIRYSDDIRR 799
Cdd:PRK02224 560 AAEAEEEAEEAREEVA-ELNSKLAELKERIESL----ERIRTLLAAIADAEDEIE--------RLREKREALAELNDERR 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 800 niqkdlDDLREKYDRVHtdnekilgELEHAQKAAHLAEqqLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 879
Cdd:PRK02224 627 ------ERLAEKRERKR--------ELEAEFDEARIEE--AREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENEL 690
|
410 420
....*....|....*....|..
gi 1845979720 880 KNGARNNDELDKLRQTISDYES 901
Cdd:PRK02224 691 EELEELRERREALENRVEALEA 712
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1151-1490 |
3.84e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 52.20 E-value: 3.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1151 ELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQigrgndkTENDITELKRKHaaeidklkSDISALHDKHLS 1230
Cdd:pfam07888 51 EAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQ-------SREKHEELEEKY--------KELSASSEELSE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1231 DLDDEKEQYGKAVENLKSVEDDLRD----------KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWD 1300
Cdd:pfam07888 116 EKDALLAQRAAHEARIRELEEDIKTltqrvleretELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1301 DFRN---DADKEIQKWKTDAYTVR---SEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELA 1374
Cdd:pfam07888 196 ELRNslaQRDTQVLQLQDTITTLTqklTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELH 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1375 DTKGNLVQ-----KEMDLESTQNRLRSLEDQHSTLQS-DANKWRGE--------LDAALRENdilKSNNTNMETDLTRLK 1440
Cdd:pfam07888 276 QARLQAAQltlqlADASLALREGRARWAQERETLQQSaEADKDRIEklsaelqrLEERLQEE---RMEREKLEVELGREK 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 1441 --NRLKSAEDA--LKELKNSLSHAKTEKERLQNafrEKTKQADHLNQLASQFDT 1490
Cdd:pfam07888 353 dcNRVQLSESRreLQELKASLRVAQKEKEQLQA---EKQELLEYIRQLEQRLET 403
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1229-1449 |
3.88e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 3.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1229 LSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADK 1308
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1309 EIQKwktdAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLE 1388
Cdd:COG4942 109 LLRA----LYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1389 STQNRLRSLEDQHSTLQSDANKWRGELDAALREndiLKSNNTNMETDLTRLKNRLKSAEDA 1449
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAE---LQQEAEELEALIARLEAEAAAAAER 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1779-2226 |
4.11e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.48 E-value: 4.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1779 INQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL----RSQEE---ALKQRDEERRQMKSKMVAAELQARGKEAQLRH 1851
Cdd:pfam01576 491 LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdmkKKLEEdagTLEALEEGKKRLQRELEALTQQLEEKAAAYDK 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1852 LNEQLKNLRTDLDNAHTDIRSLRD----------------KEEQWDSSRFQLETKMRESDSdtNKYQLQIASFESERQIL 1915
Cdd:pfam01576 571 LEKTKNRLQQELDDLLVDLDHQRQlvsnlekkqkkfdqmlAEEKAISARYAEERDRAEAEA--REKETRALSLARALEEA 648
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1916 TEKIKELDGALRLSDSKVQDM---KDDTDKLRRDLTKA---------------ESVENELRKTIDIQSKTSHEYQLLKDQ 1977
Cdd:pfam01576 649 LEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELERSkraleqqveemktqlEELEDELQATEDAKLRLEVNMQALKAQ 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1978 L---LNTQNELNgaNNRKQQLENELLNVRSEVRD-YKQRVHDVNNR------VSELQRQLQDANteKNRVEdrflsVEKV 2047
Cdd:pfam01576 729 FerdLQARDEQG--EEKRRQLVKQVRELEAELEDeRKQRAQAVAAKkkleldLKELEAQIDAAN--KGREE-----AVKQ 799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2048 VNTMRTTETDLRQQLETAK------------NEKRVATKELE--DLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIEL 2113
Cdd:pfam01576 800 LKKLQAQMKDLQRELEEARasrdeilaqskeSEKKLKNLEAEllQLQEDLAASERARRQAQQERDELADEIASGASGKSA 879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2114 LENEKRRTDAAIreTALQREAIEKSLNaMERENKELYKncAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEK 2193
Cdd:pfam01576 880 LQDEKRRLEARI--AQLEEELEEEQSN-TELLNDRLRK--STLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKL 954
|
490 500 510
....*....|....*....|....*....|...
gi 1845979720 2194 GQIEKVIENRertHRNRIKQLEDQIAILRDQLD 2226
Cdd:pfam01576 955 QEMEGTVKSK---FKSSIAALEAKIAQLEEQLE 984
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1371-1618 |
4.34e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 4.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1371 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDAL 1450
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1451 KELKNSLShaktekERLQNAFRekTKQADHLNQLASQFD-TKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKF 1529
Cdd:COG4942 100 EAQKEELA------ELLRALYR--LGRQPPLALLLSPEDfLDAVRRLQYLKYLAP-------ARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1530 GNEQIQRKSDEYQTTIDDLahshrvsEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDyikADSERDILSDALR 1609
Cdd:COG4942 165 LRAELEAERAELEALLAEL-------EEERAALEALKAERQKLLARLEKELAELAAELAELQQE---AEELEALIARLEA 234
|
....*....
gi 1845979720 1610 RFQSSANRV 1618
Cdd:COG4942 235 EAAAAAERT 243
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1793-2246 |
4.50e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.08 E-value: 4.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1793 LQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGK--EAQLRHLNEQLKNLRTDLDNAHTDI 1870
Cdd:COG4717 83 AEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEalEAELAELPERLEELEERLEELRELE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1871 RSLRDKEEQWDSSRFQLETKMRESDSDTNKyqlQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1950
Cdd:COG4717 163 EELEELEAELAELQEELEELLEQLSLATEE---ELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1951 ESVE--NELRKTIDIQSkTSHEYQLLKDQLLNTQNELNGAnnrkQQLENELLNVRSEVRDYKQRVHdvNNRVSELQRQLQ 2028
Cdd:COG4717 240 ALEErlKEARLLLLIAA-ALLALLGLGGSLLSLILTIAGV----LFLVLGLLALLFLLLAREKASL--GKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2029 DANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRvatkELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL 2108
Cdd:COG4717 313 LEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR----EAEELEEELQLEELEQEIAALLAEAGVEDEEELR 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2109 KKIELLEnekrrtdaairetalQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENgnRILELtNKQREEQERQLIR 2188
Cdd:COG4717 389 AALEQAE---------------EYQELKEELEELEEQLEELLGELEELLEALDEEELEE--ELEEL-EEELEELEEELEE 450
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2189 MRQEKGQIEkvienrerthrNRIKQLE--DQIAILRDQLDGERRRRREYVDRSMVNDIGR 2246
Cdd:COG4717 451 LREELAELE-----------AELEQLEedGELAELLQELEELKAELRELAEEWAALKLAL 499
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1156-1593 |
4.66e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 52.03 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1156 KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKLKSDISALHdkHL-SDLDD 1234
Cdd:pfam05483 223 KIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKD--HLtKELED 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1235 EKEQYGKAVENLKSVEDDLRdklnnLEKQLADSLNRENELEREkrdydekinslygqnqkikdewddfrndadkEIQKWK 1314
Cdd:pfam05483 301 IKMSLQRSMSTQKALEEDLQ-----IATKTICQLTEEKEAQME-------------------------------ELNKAK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1315 TDAYTVRSEAKA----LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLEST 1390
Cdd:pfam05483 345 AAHSFVVTEFEAttcsLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1391 qnrlRSLEDQHSTLQSDANKWRGELDAalRENDIlksnnTNMETDLTRLKNRLKSAEDALKELKNSLshaktEKERLQNA 1470
Cdd:pfam05483 425 ----KQFEKIAEELKGKEQELIFLLQA--REKEI-----HDLEIQLTAIKTSEEHYLKEVEDLKTEL-----EKEKLKNI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1471 frEKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQ-------ELKFGNEQIQRKSDEYQT 1543
Cdd:pfam05483 489 --ELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEkemnlrdELESVREEFIQKGDEVKC 566
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1544 TIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQD 1593
Cdd:pfam05483 567 KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1274-1616 |
4.96e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 52.13 E-value: 4.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1274 LEREKRDYDEKINSLYGQNQKIKDEwddfRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVN 1353
Cdd:pfam10174 245 LERNIRDLEDEVQMLKTNGLLHTED----REEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1354 DHTSKV----RDLTSQVRH---LEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILK 1426
Cdd:pfam10174 321 DCKQHIevlkESLTAKEQRaaiLQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQ 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1427 SNNTNM-------ETDLTRLKNRLKSAED-------ALKELKNSLSHAKTEKERLQNAF----REKTKQADHLNQLASQF 1488
Cdd:pfam10174 401 KKIENLqeqlrdkDKQLAGLKERVKSLQTdssntdtALTTLEEALSEKERIIERLKEQReredRERLEELESLKKENKDL 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1489 DTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAlqelea 1568
Cdd:pfam10174 481 KEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNP------ 554
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1845979720 1569 rkyeinDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1616
Cdd:pfam10174 555 ------EINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKN 596
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1128-1344 |
5.50e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 5.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1128 TITNTKERIERIEKNILDRYHDDELVEHKIREVNDrwkrELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1207
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLK----QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1208 RKHAAEIDKLKSDISA-------------LHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1274
Cdd:COG4942 97 AELEAQKEELAELLRAlyrlgrqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1275 EREKRDYDEKINSLygqnQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR 1344
Cdd:COG4942 177 EALLAELEEERAAL----EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1741-2149 |
6.06e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 51.71 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1741 EGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1820
Cdd:pfam01576 200 EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQED 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1821 LkqrdeerrqmkskmvAAELQARGK-EAQLRHLNEQLKNLRTDLD------NAHTDIRSLRDKEEQWDSSRFQLETKMRE 1893
Cdd:pfam01576 280 L---------------ESERAARNKaEKQRRDLGEELEALKTELEdtldttAAQQELRSKREQEVTELKKALEEETRSHE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1894 SDS-----------DTNKYQLQIA-----SFESERQILTEKIKELDGALRLsdskVQDMKDDTDKLRRdltKAESVENEL 1957
Cdd:pfam01576 345 AQLqemrqkhtqalEELTEQLEQAkrnkaNLEKAKQALESENAELQAELRT----LQQAKQDSEHKRK---KLEGQLQEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1958 rktidiQSKTSheyqllkdqllNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRV 2037
Cdd:pfam01576 418 ------QARLS-----------ESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEE 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2038 EDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLkrrlaqlenerrnSSQLSDgWKKEKITLLKKIELLENE 2117
Cdd:pfam01576 481 TRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTL-------------QAQLSD-MKKKLEEDAGTLEALEEG 546
|
410 420 430
....*....|....*....|....*....|..
gi 1845979720 2118 KRRTDAAIRETALQREAIEKSLNAMERENKEL 2149
Cdd:pfam01576 547 KKRLQRELEALTQQLEEKAAAYDKLEKTKNRL 578
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
535-693 |
6.38e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.92 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 535 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDgTVSIKRTRSlspgktplppSEALRAVRNT- 613
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIE-EVEARIKKY----------EEQLGNVRNNk 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 614 -FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERV 692
Cdd:COG1579 90 eYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
.
gi 1845979720 693 A 693
Cdd:COG1579 170 A 170
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
851-1542 |
7.03e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 7.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 851 QKQKDEHARHLFDIRHKleteikgrQDLEKNGArnndELDKLRQTISDYESQINllrrhndELDTTIKGHQGKITHLENE 930
Cdd:pfam12128 217 RLNRQQVEHWIRDIQAI--------AGIMKIRP----EFTKLQQEFNTLESAEL-------RLSHLHFGYKSDETLIASR 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 931 LHSRSgeiEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENK--ELVGKEARARDAANQQLSRA 1008
Cdd:pfam12128 278 QEERQ---ETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGafLDADIETAAADQEQLPSWQS 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1009 NLLNKE-----LEDTKQDLKHSTD-----VNKQLEQDIRDLKERLANIgkggrisRDSTTGTDGGAFGDRSSVADPSRTR 1078
Cdd:pfam12128 355 ELENLEerlkaLTGKHQDVTAKYNrrrskIKEQNNRDIAGIKDKLAKI-------REARDRQLAVAEDDLQALESELREQ 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1079 GAAGSTVFVPAAEDIESRGGGE--------------IDIPSSGDVIHGRDGRDGRDAGNRGTHTITNTK---------ER 1135
Cdd:pfam12128 428 LEAGKLEFNEEEYRLKSRLGELklrlnqatatpellLQLENFDERIERAREEQEAANAEVERLQSELRQarkrrdqasEA 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1136 IERIEKNILDRYHDDELVEHKI------------REVNDrWKRELERLENE----KDDL--ERRIRELEDELSQIGRGND 1197
Cdd:pfam12128 508 LRQASRRLEERQSALDELELQLfpqagtllhflrKEAPD-WEQSIGKVISPellhRTDLdpEVWDGSVGGELNLYGVKLD 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1198 KTENDITE---LKRKHAAEIDKLKSDISALHDKHlSDLDDEKEQYGKAVEN-----------LKSVEDDLRdKLNNLEKQ 1263
Cdd:pfam12128 587 LKRIDVPEwaaSEEELRERLDKAEEALQSAREKQ-AAAEEQLVQANGELEKasreetfartaLKNARLDLR-RLFDEKQS 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1264 LADSLNRenELEREKRDYDEKINSLYGQNQKIKDEW--------DDFRNDADKEIQKWK-----TDAYTVRSEAkALETT 1330
Cdd:pfam12128 665 EKDKKNK--ALAERKDSANERLNSLEAQLKQLDKKHqawleeqkEQKREARTEKQAYWQvvegaLDAQLALLKA-AIAAR 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1331 NTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANK 1410
Cdd:pfam12128 742 RSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIER 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1411 wrgeldAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLqNAFRE--KTKQAD----HLNQL 1484
Cdd:pfam12128 822 ------AISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKL-ATLKEdaNSEQAQgsigERLAQ 894
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1485 ASQFDTKLTKLRNELQD--TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1542
Cdd:pfam12128 895 LEDLKLKRDYLSESVKKyvEHFKNVIADHSGSGLAETWESLREEDHYQNDKGIRLLDYRK 954
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
690-1267 |
7.16e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 51.28 E-value: 7.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 690 ERVAAEKARKFLEDELAKLQAsfQKSSTDDARKLRDEMDEhtnsiQEEFKTRIDELNRRvENLLRENNRLKSEVNPLKDK 769
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIEL--EKKASALKRQLDRESDR-----NQELQKRIRLLEKR-EAEAEEALREQAELNRLKKK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 770 YRDleneynSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDD 849
Cdd:pfam05557 84 YLE------ALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 850 YQKQKDEHARHLFDIRhKLETEIKGRQDLEKNGARNNDELDKlrqtISDYESQINLLRRHNDELDTTIkGHQGKITHLEN 929
Cdd:pfam05557 158 LEKQQSSLAEAEQRIK-ELEFEIQSQEQDSEIVKNSKSELAR----IPELEKELERLREHNKHLNENI-ENKLLLKEEVE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 930 ELHSRSGEIEKLNDLNQRLQKEKQDI---LNQKLKLDgdvQALKETIRK---LENELEKLRNENKELVGKEArardAANQ 1003
Cdd:pfam05557 232 DLKRKLEREEKYREEAATLELEKEKLeqeLQSWVKLA---QDTGLNLRSpedLSRRIEQLQQREIVLKEENS----SLTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1004 QLSRANLLNKELED-TKQDLKHSTDVNKQLEQD---IRDLKERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRG 1079
Cdd:pfam05557 305 SARQLEKARRELEQeLAQYLKKIEDLNKKLKRHkalVRRLQRRVLLLTKERDGYRAILESYDKELTMSNYSPQLLERIEE 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1080 AAGSTVFVPAAEDiesrgggeiDIPSSGDVIHgrdgrdgrdagnrgtHTITNTKERIERIEKNILDRYHDDELVE-HKIR 1158
Cdd:pfam05557 385 AEDMTQKMQAHNE---------EMEAQLSVAE---------------EELGGYKQQAQTLERELQALRQQESLADpSYSK 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1159 EVNDRWKRELERLENEKDDLERRIRELEDELSQ---IGRGNDK-------TENDITELKRKHAAEIDKLKSDISALHDkH 1228
Cdd:pfam05557 441 EEVDSLRRKLETLELERQRLREQKNELEMELERrclQGDYDPKktkvlhlSMNPAAEAYQQRKNQLEKLQAEIERLKR-L 519
|
570 580 590
....*....|....*....|....*....|....*....
gi 1845979720 1229 LSDLDDEKEQYGKAVEnlkSVEDDLRDKLNNLEKQLADS 1267
Cdd:pfam05557 520 LKKLEDDLEQVLRLPE---TTSTMNFKEVLDLRKELESA 555
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
530-792 |
7.20e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 51.56 E-value: 7.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 530 IERNIELESrgDDSQRKIAELEAELRRNREKLNEAQGALKKlhemaqdseknvdgtvsikrtrslspgktplppsealra 609
Cdd:COG3206 162 LEQNLELRR--EEARKALEFLEEQLPELRKELEEAEAALEE--------------------------------------- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 610 vrntFRNKdNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEA 689
Cdd:COG3206 201 ----FRQK-NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAEL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 690 ERVAAEKARKFLED--ELAKLQASFQksstddarKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEV---N 764
Cdd:COG3206 276 EAELAELSARYTPNhpDVIALRAQIA--------ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLaelP 347
|
250 260 270
....*....|....*....|....*....|...
gi 1845979720 765 PLKDKYRDLENEYNSTQRRIEE-----KETQIR 792
Cdd:COG3206 348 ELEAELRRLEREVEVARELYESllqrlEEARLA 380
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1791-2240 |
7.73e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 7.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1791 DNLQDAEEERRALESRLQSAKtllRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRhlnEQLKNLRTDLDNAHTDI 1870
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAK---KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA---AAAKKKADEAKKKAEEK 1430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1871 RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSdSKVQDMKDDTDKLRRDlTKA 1950
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK-KKAEEAKKKADEAKKA-AEA 1508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1951 ESVENELRKTidiqSKTSHEYQLLKDQLLNTQNELNGANNRKQQLE---NELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2027
Cdd:PTZ00121 1509 KKKADEAKKA----EEAKKADEAKKAEEAKKADEAKKAEEKKKADElkkAEELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2028 QDANTEKNRVEDRFLSVEKVvNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITL 2107
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEE-KKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2108 LKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENK--ELYKNCAQLQQQIAQ---LEMENGNRILELtNKQREEQ 2182
Cdd:PTZ00121 1664 AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKaeELKKKEAEEKKKAEElkkAEEENKIKAEEA-KKEAEED 1742
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 2183 ERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLDGERRRRREYVDRSM 2240
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1153-1285 |
8.02e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.54 E-value: 8.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1153 VEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA-------------------AE 1213
Cdd:COG1579 22 LEHRLKEL----PAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKkyeeqlgnvrnnkeyealqKE 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1214 IDKLKSDISALHDKHLS---DLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKI 1285
Cdd:COG1579 98 IESLKRRISDLEDEILElmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1791-2225 |
8.68e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.38 E-value: 8.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1791 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaaELQARGKEAQLRH----LNEQLKNLRTDLDNA 1866
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAEL---NQLLRTLDDQWKEkrdeLNGELSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1867 HTDIRSLRDKEEQWDSSRfqLETKMRESD------SDTNKYQLQIASFESERQILTEKIKELDGALRLS-DSKVQDMKDD 1939
Cdd:pfam12128 321 RSELEALEDQHGAFLDAD--IETAAADQEqlpswqSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQnNRDIAGIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1940 TDKLR--RDLTKA------ESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENELLNVR---SEVRD 2008
Cdd:pfam12128 399 LAKIReaRDRQLAvaeddlQALESELREQLEAGKLEFNEEEY---RLKSRLGELKLRLNQATATPELLLQLEnfdERIER 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2009 YKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNE-KRVATKELEDLKRRLAQLE 2087
Cdd:pfam12128 476 AREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTlLHFLRKEAPDWEQSIGKVI 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2088 NER----------RNSSQLSDGWKKEKITL-LKKIELLE----NEKRRTDAAIRETALQ--REAIEKSLNAMERENKELY 2150
Cdd:pfam12128 556 SPEllhrtdldpeVWDGSVGGELNLYGVKLdLKRIDVPEwaasEEELRERLDKAEEALQsaREKQAAAEEQLVQANGELE 635
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 2151 KncaqlqqqiAQLEMENGNRILEltnKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQL 2225
Cdd:pfam12128 636 K---------ASREETFARTALK---NARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKH 698
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1740-2226 |
8.98e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.19 E-value: 8.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1740 LEGTLQSLLNKIEKLEMERN---ELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLqsaktllRS 1816
Cdd:PRK02224 211 LESELAELDEEIERYEEQREqarETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEV-------RD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1817 QEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDS 1896
Cdd:PRK02224 284 LRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1897 DTNKYQLQIASFESERQILTEKIKELDGAL-----RLSDSKVQ--DMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSH 1969
Cdd:PRK02224 364 EAAELESELEEAREAVEDRREEIEELEEEIeelreRFGDAPVDlgNAEDFLEELREERDELREREAELEATLRTARERVE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1970 EYQLLKD--------QLLNTQNELNGANNRKQQ---LENELLNVRSEVRDYKQRvHDVNNRVSELQRQLQDANTEKNRVE 2038
Cdd:PRK02224 444 EAEALLEagkcpecgQPVEGSPHVETIEEDRERveeLEAELEDLEEEVEEVEER-LERAEDLVEAEDRIERLEERREDLE 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2039 DRFLSVEKVVNTMRTTETDLRQQ---LETAKNEKRVATKEL----EDLKRRLAQLENERrnssqlsdGWKKEKITLLKKI 2111
Cdd:PRK02224 523 ELIAERRETIEEKRERAEELRERaaeLEAEAEEKREAAAEAeeeaEEAREEVAELNSKL--------AELKERIESLERI 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2112 ELLENEKRRTDAAIRETALQREAieksLNAMERENKELYKncAQLQQQIAQLEMENGNRILEL-TNKQREEQ-----ERQ 2185
Cdd:PRK02224 595 RTLLAAIADAEDEIERLREKREA----LAELNDERRERLA--EKRERKRELEAEFDEARIEEArEDKERAEEyleqvEEK 668
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1845979720 2186 LIRMRQEKGQIEKVIENRErthrNRIKQLEDqiaiLRDQLD 2226
Cdd:PRK02224 669 LDELREERDDLQAEIGAVE----NELEELEE----LRERRE 701
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1993-2143 |
9.29e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.15 E-value: 9.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1993 QQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEK--R 2070
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKeyE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 2071 VATKELEDLKRRLAQLENERRN----SSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAME 2143
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILElmerIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELA 169
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
639-1544 |
9.94e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.20 E-value: 9.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 639 LNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLqasfqksstd 718
Cdd:TIGR00606 181 ATRYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPL---------- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 719 darKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSE-VNPLKDKYRDLENEYNSTQRRIEEKETQirysddi 797
Cdd:TIGR00606 251 ---KNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKmEKVFQGTDEQLNDLYHNHQRTVREKERE------- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 798 RRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQlkeikIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQD 877
Cdd:TIGR00606 321 LVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEH-----IRARDSLIQSLATRLELDGFERGPFSERQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 878 LEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN 957
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 958 qklkldgdvqaLKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRANLLNKELEDTKQdLKHSTDVNKQLEQDIR 1037
Cdd:TIGR00606 476 -----------LDQELRKAERELSKA-EKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQ-LNHHTTTRTQMEMLTK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1038 DlkerlaNIGKGGRISRDSTTGTDggafgdrssvadpsRTRGAAGSTVFVPAAEDIESRGGGEIDIpssgdvihgrdgrd 1117
Cdd:TIGR00606 543 D------KMDKDEQIRKIKSRHSD--------------ELTSLLGYFPNKKQLEDWLHSKSKEINQ-------------- 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1118 grdagnrgthtitnTKERIERIEKNIldryhddelveHKIREVNDRWKRELERLENEKDDLERRIREL---EDELSQIGR 1194
Cdd:TIGR00606 589 --------------TRDRLAKLNKEL-----------ASLEQNKNHINNELESKEEQLSSYEDKLFDVcgsQDEESDLER 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1195 GNDKTENDITELKRKHAAeidklksdiSALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENEL 1274
Cdd:TIGR00606 644 LKEEIEKSSKQRAMLAGA---------TAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKST 714
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1275 ERE----KRDYDEKINSLYGQN---QKIKDEWDDFRN---DADKEIQKWKTDaytVRSEAKALETTNTALKAQ--LQAAN 1342
Cdd:TIGR00606 715 ESElkkkEKRRDEMLGLAPGRQsiiDLKEKEIPELRNklqKVNRDIQRLKND---IEEQETLLGTIMPEEESAkvCLTDV 791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1343 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMD---------LESTQNRLRSLEDQHSTLQSDANKWRG 1413
Cdd:TIGR00606 792 TIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQheldtvvskIELNRKLIQDQQEQIQHLKSKTNELKS 871
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1414 E---LDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQA-DHLNQLASQFD 1489
Cdd:TIGR00606 872 EklqIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAqDKVNDIKEKVK 951
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1490 TK---LTKLRNELQD-TNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTT 1544
Cdd:TIGR00606 952 NIhgyMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQ 1010
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1442-1618 |
1.03e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1442 RLKSAEDALKELKNSLSH--AKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITSDTER-NALRN 1518
Cdd:COG4913 266 AARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLER 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1519 ELQKLSQELkfgnEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKyeiNDLTSRLDSTEQRLATLQQDYIKAD 1598
Cdd:COG4913 346 EIERLEREL----EERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL---EALEEELEALEEALAEAEAALRDLR 418
|
170 180
....*....|....*....|
gi 1845979720 1599 SERDILSDALRRFQSSANRV 1618
Cdd:COG4913 419 RELRELEAEIASLERRKSNI 438
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1844-2222 |
1.06e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.13 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1844 GKEAQLRHLNEQLKNLRTDLDNAHtdIRSLRDKEEQ----WDSSRFQLETKMRESDSDTNKYQLQiasfESERQILTEKI 1919
Cdd:pfam02463 113 GKNVTKKEVAELLESQGISPEAYN--FLVQGGKIEIiammKPERRLEIEEEAAGSRLKRKKKEAL----KKLIEETENLA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1920 KELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1999
Cdd:pfam02463 187 ELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEK 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2000 LnvrsevrDYKQRVHDVNNRVSELQrqlqdaNTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2079
Cdd:pfam02463 267 L-------AQVLKENKEEEKEKKLQ------EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2080 KRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQ 2159
Cdd:pfam02463 334 KEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLEL 413
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2160 IAQLEMENGNRILELTNKQREEQERQLIrmRQEKGQIEKVIENRERTHRNRIKQLEDQIAILR 2222
Cdd:pfam02463 414 ARQLEDLLKEEKKEELEILEEEEESIEL--KQGKLTEEKEELEKQELKLLKDELELKKSEDLL 474
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
723-1279 |
1.10e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.06 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 723 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRnIQ 802
Cdd:PRK01156 188 LEEKLKSSNLEL-ENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKN---RYESEIKT-AE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 803 KDLDDLREKYDRVHTDNE---KILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLE 879
Cdd:PRK01156 263 SDLSMELEKNNYYKELEErhmKIINDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYI 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 880 KNGARNnDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELhSRSGEIEKLNDlnQRLQKEKQDILNQK 959
Cdd:PRK01156 343 KKKSRY-DDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFI-SEILKIQEIDP--DAIKKELNEINVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 960 LKLDGDVQALKETIRKLENELEKLRNENKELVGK-----------EARARDAANQQLSRANLLNKELEDTKQDLKhstdv 1028
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVK----- 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1029 nkQLEQDIRDLKERLANIgKGGRISR--------DSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGE 1100
Cdd:PRK01156 494 --DIDEKIVDLKKRKEYL-ESEEINKsineynkiESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1101 IDIPSSGDVIhgrdgrdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLER 1180
Cdd:PRK01156 571 LNALAVISLI-----------------DIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNN 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1181 RIRELEDELSQIGRGNDKTENditelKRKHAAEIDKLKSDISALHDKhLSDLDDEKEQYGKAVEN-------LKSVEDDL 1253
Cdd:PRK01156 634 KYNEIQENKILIEKLRGKIDN-----YKKQIAEIDSIIPDLKEITSR-INDIEDNLKKSRKALDDakanrarLESTIEIL 707
|
570 580
....*....|....*....|....*.
gi 1845979720 1254 RDKLNNLEKQLADslnRENELEREKR 1279
Cdd:PRK01156 708 RTRINELSDRIND---INETLESMKK 730
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1736-2110 |
1.22e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.79 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKT-------TETHTTINQKETRYRNIEDNLQDAEEERRALESRLQ 1808
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELtnsesenSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1809 SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR---TDLDNAHTDIRSLRDKEEQ------ 1879
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTnqdSVKELIIKNLDNTRESLETqlkvls 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1880 ---------WDSSRFQLETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDL 1947
Cdd:TIGR04523 475 rsinkikqnLEQKQKELKSKEKELKKLNEEKKEleeKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1948 TKaesveNELRKTIDIQSKTSHEYQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQL 2027
Cdd:TIGR04523 555 KK-----ENLEKEIDEKNKEIEELKQTQKSLKKKQEEK---QELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN 626
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2028 QDANTEKNRVEDRFLSVEKVVNTMRTTetdlrqqLETAKNEKRVATKELEDLKRRLAQLenerrnsSQLSDGWKKEKITL 2107
Cdd:TIGR04523 627 EKLSSIIKNIKSKKNKLKQEVKQIKET-------IKEIRNKWPEIIKKIKESKTKIDDI-------IELMKDWLKELSLH 692
|
...
gi 1845979720 2108 LKK 2110
Cdd:TIGR04523 693 YKK 695
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1734-2061 |
1.44e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1734 GFD----IANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTEThttinQKETRYRNIEDNLQDAEEERRALE---SR 1806
Cdd:COG4913 605 GFDnrakLAALEAELAELEEELAEAEERLEALEAELDALQERREAL-----QRLAEYSWDEIDVASAEREIAELEaelER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1807 LQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRdkeeqwdssRFQ 1886
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL---------RAL 750
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1887 LETKMRESDSDTNKYQLQiASFESERQILTEKIKELDGALRLSDSK-VQDMKDDTDKLRRDLTKAESVENELRK--TIDI 1963
Cdd:COG4913 751 LEERFAAALGDAVERELR-ENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESLPEYLALLDRleEDGL 829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1964 QSKTSHEYQLLKDQ----LLNTQNELNGANNR-KQQLE--NELL-----------------NVRSEVRDYKQRVHDVNNR 2019
Cdd:COG4913 830 PEYEERFKELLNENsiefVADLLSKLRRAIREiKERIDplNDSLkripfgpgrylrlearpRPDPEVREFRQELRAVTSG 909
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1845979720 2020 VSELQRQLQdanteknrvEDRFLSVEKVVNTMRTTETDLRQQ 2061
Cdd:COG4913 910 ASLFDEELS---------EARFAALKRLIERLRSEEEESDRR 942
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
1133-1528 |
1.53e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.82 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1133 KERIerieKNILDR--YHDDELVEHKIREVNDRWKRELERLE--------NEKDDLERRIREledELSQIGRGN-DKTEN 1201
Cdd:TIGR01612 606 KEKI----KNISDKneYIKKAIDLKKIIENNNAYIDELAKISpyqvpehlKNKDKIYSTIKS---ELSKIYEDDiDALYN 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1202 DITELKRKHA-------AEIDKLKSDISALHDK-----------HLSDLDDEKEQYGKA-VENLKSVEDDLRDKLNnleK 1262
Cdd:TIGR01612 679 ELSSIVKENAidntedkAKLDDLKSKIDKEYDKiqnmetatvelHLSNIENKKNELLDIiVEIKKHIHGEINKDLN---K 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1263 QLADSLNRENELErekrdydEKINslygqnqkikdewdDFRNDADkEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN 1342
Cdd:TIGR01612 756 ILEDFKNKEKELS-------NKIN--------------DYAKEKD-ELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNY 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1343 DRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAdtkgNLVQKEMDLEStqNRLRSLEDQHSTLQSDANKWRGELdaalrEN 1422
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIFKIINEMKFMKDDFL----NKVDKFINFEN--NCKEKIDSEHEQFAELTNKIKAEI-----SD 882
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1423 DILKSNNTNMETDLTRLKNRLKSAE------DALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQ------------- 1483
Cdd:TIGR01612 883 DKLNDYEKKFNDSKSLINEINKSIEeeyqniNTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKnidtikesnliek 962
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1845979720 1484 -LASQFDTKLTKLRNELQDTNDKLITSDTERNalRNELQKLSQELK 1528
Cdd:TIGR01612 963 sYKDKFDNTLIDKINELDKAFKDASLNDYEAK--NNELIKYFNDLK 1006
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1736-2226 |
1.57e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1736 DIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIED---NLQDAEEERRALESRLQSAKT 1812
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSalnELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1813 LLRSQEEALKQRDE-ERRQMK---SKMVAAELQARG---KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDssrf 1885
Cdd:PRK01156 264 DLSMELEKNNYYKElEERHMKiinDPVYKNRNYINDyfkYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYN---- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1886 QLETKMRESDsDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDK-LRRDLTKAESVENEL----RKT 1960
Cdd:PRK01156 340 DYIKKKSRYD-DLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEiLKIQEIDPDAIKKELneinVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1961 IDIQSKTSHEYQLL------KDQLLNTQNELNGANNRK---QQLENEllNVRSEVRDYKQRVHDVNNRVSELQRQLQDAN 2031
Cdd:PRK01156 419 QDISSKVSSLNQRIralrenLDELSRNMEMLNGQSVCPvcgTTLGEE--KSNHIINHYNEKKSRLEEKIREIEIEVKDID 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2032 TEKNRVEDR--FLSVEKVvntmrttetdlrQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLL- 2108
Cdd:PRK01156 497 EKIVDLKKRkeYLESEEI------------NKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLd 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2109 -KKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQ--QQIAQLEMENGNRILELTNKQREEQERQ 2185
Cdd:PRK01156 565 sKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKsyIDKSIREIENEANNLNNKYNEIQENKIL 644
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1845979720 2186 LIRMRQE----KGQIEKV--IENRERTHRNRIKQLEDQIAILRDQLD 2226
Cdd:PRK01156 645 IEKLRGKidnyKKQIAEIdsIIPDLKEITSRINDIEDNLKKSRKALD 691
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1888-2106 |
1.65e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.83 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1888 ETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTID----I 1963
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGerarA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1964 QSKTSHEYQLLkDQLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLS 2043
Cdd:COG3883 95 LYRSGGSVSYL-DVLLGSES-FSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2044 VEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKIT 2106
Cdd:COG3883 173 LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1134-1327 |
1.97e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.93 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1134 ERIERIEKN------ILDRYHDDELVEHKIREVN-----DRWKRELERLENEKDDLERRIRELEDELSQIgrgndktEND 1202
Cdd:PRK05771 43 ERLRKLRSLltklseALDKLRSYLPKLNPLREEKkkvsvKSLEELIKDVEEELEKIEKEIKELEEEISEL-------ENE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1203 ITELKrKHAAEIDKLKS---DISALHDKHLSDL--------DDEKEQYGKAVENLKSVEDD----------LRDKLNNLE 1261
Cdd:PRK05771 116 IKELE-QEIERLEPWGNfdlDLSLLLGFKYVSVfvgtvpedKLEELKLESDVENVEYISTDkgyvyvvvvvLKELSDEVE 194
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1262 KQLADSLNRENELEREK------RDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKAL 1327
Cdd:PRK05771 195 EELKKLGFERLELEEEGtpseliREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEAL 266
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1909-2226 |
2.24e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1909 ESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKD---QLLNTQNE 1984
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIkDLNDKLKKNKDKINKlnsDLSKINSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1985 LNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLET 2064
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2065 AKNEKRVATKELEDLKrrlAQLENERRNSSQLSDgWKKEKITLLKKIELLENEKRRTDAAIRETALQreaIEKSLNAMER 2144
Cdd:TIGR04523 192 IKNKLLKLELLLSNLK---KKIQKNKSLESQISE-LKKQNNQLKDNIEKKQQEINEKTTEISNTQTQ---LNQLKDEQNK 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2145 ENKELYKNcaqlqqqiaQLEMENGNRILELTNKQREEQERQLIRMRQEK---------GQIEKV------IENRERTHRN 2209
Cdd:TIGR04523 265 IKKQLSEK---------QKELEQNNKKIKELEKQLNQLKSEISDLNNQKeqdwnkelkSELKNQekkleeIQNQISQNNK 335
|
330
....*....|....*..
gi 1845979720 2210 RIKQLEDQIAILRDQLD 2226
Cdd:TIGR04523 336 IISQLNEQISQLKKELT 352
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1840-2099 |
2.33e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1840 LQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEqwdssrfqletkmresdsdtnKYQLQIASFESERQILTEKI 1919
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEK---------------------ALLKQLAALERRIAALARRI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1920 KELDGALRLSDSKVQDMKDDTDKLRRDLtkaESVENELRKTIDIQSKTSHEYQLlkdQLLNTQNELNGANNRKQQLENEL 1999
Cdd:COG4942 72 RALEQELAALEAELAELEKEIAELRAEL---EAQKEELAELLRALYRLGRQPPL---ALLLSPEDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2000 LNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDL 2079
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEEL 225
|
250 260
....*....|....*....|
gi 1845979720 2080 KRRLAQLENERRNSSQLSDG 2099
Cdd:COG4942 226 EALIARLEAEAAAAAERTPA 245
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
745-1013 |
2.44e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 745 LNRRVENLLRENNRLKSEvnPLKDKYRDLENEYNSTQRRIEEKETQIRysddirrniqkdldDLREKYDRVHTDNEkilg 824
Cdd:COG3206 154 ANALAEAYLEQNLELRRE--EARKALEFLEEQLPELRKELEEAEAALE--------------EFRQKNGLVDLSEE---- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 825 elehaqkaAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLekngaRNNDELDKLRQTISDYESQIN 904
Cdd:COG3206 214 --------AKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL-----LQSPVIQQLRAQLAELEAELA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 905 LLRRHNDELDTTIKGHQgkithlenelhsrsgeiEKLNDLNQRLQKEKQDILNQklkLDGDVQALKETIRKLENELEKLR 984
Cdd:COG3206 281 ELSARYTPNHPDVIALR-----------------AQIAALRAQLQQEAQRILAS---LEAELEALQAREASLQAQLAQLE 340
|
250 260 270
....*....|....*....|....*....|...
gi 1845979720 985 NENKELVGKEARA----RDAANQQLSRANLLNK 1013
Cdd:COG3206 341 ARLAELPELEAELrrleREVEVARELYESLLQR 373
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
836-1130 |
2.45e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.06 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 836 AEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDT 915
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERR---EELGE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 916 TIKGHQ---GKITHLENELHSRS-----GEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNEN 987
Cdd:COG3883 91 RARALYrsgGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 988 KELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGD 1067
Cdd:COG3883 171 AELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAG 250
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1068 RSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHTIT 1130
Cdd:COG3883 251 AAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGV 313
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1826-2206 |
2.86e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.69 E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1826 EERRQMKSKMVAAELQA--RGKEAQLRhLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQL 1903
Cdd:COG5022 737 EDMRDAKLDNIATRIQRaiRGRYLRRR-YLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSY 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1904 QIASFESERQILTEKIkeldgaLRLSDSKVQDMKDDTDKLR--RDLTKAESVENELRKTIDIQSKTshEYQLLKDQLLNT 1981
Cdd:COG5022 816 LACIIKLQKTIKREKK------LRETEEVEFSLKAEVLIQKfgRSLKAKKRFSLLKKETIYLQSAQ--RVELAERQLQEL 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1982 QNELNGANNRKQ---QLENELLNVRSEVRdykqrvhdvNNRVSELQRQLQDANTEKNRVEDRFLSVEKvvnTMRTTETDL 2058
Cdd:COG5022 888 KIDVKSISSLKLvnlELESEIIELKKSLS---------SDLIENLEFKTELIARLKKLLNNIDLEEGP---SIEYVKLPE 955
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2059 RQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKrrtdaairetalqreaieKS 2138
Cdd:COG5022 956 LNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQEST------------------KQ 1017
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 2139 LNAMERENKELYKN----CAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERT 2206
Cdd:COG5022 1018 LKELPVEVAELQSAskiiSSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLEST 1089
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1794-2217 |
3.07e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 3.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1794 QDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARgKEAQLRHLNEQLKNLRTDLdNAHTDIRSL 1873
Cdd:TIGR00618 208 LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRAQE-AVLEETQER 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1874 RDKEEQW----------DSSRFQ-------LETKMRESDSDTNKYQL---QIASFESERQILTEKIKELDgALRLSDSKV 1933
Cdd:TIGR00618 286 INRARKAaplaahikavTQIEQQaqrihteLQSKMRSRAKLLMKRAAhvkQQSSIEEQRRLLQTLHSQEI-HIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1934 QDMKDDTDK----------LRRDLTKAESVENELRKTIDIQSKTSH-------EYQLLKDQLLNTQNELNGANNRKQQLE 1996
Cdd:TIGR00618 365 TSIREISCQqhtltqhihtLQQQKTTLTQKLQSLCKELDILQREQAtidtrtsAFRDLQGQLAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1997 NELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQlETAKNEKRVATKEL 2076
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS-CIHPNPARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2077 EDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQL 2156
Cdd:TIGR00618 524 GPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2157 QQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEK---------VIENRERTHRNRIKQLEDQ 2217
Cdd:TIGR00618 604 SEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLtalhalqltLTQERVREHALSIRVLPKE 673
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
783-941 |
3.16e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 3.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 783 RIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEH--ARH 860
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 861 LFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRrhnDELDTTIKGHQGKITHLENELHSRSGEIEK 940
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELE---AELEEKKAELDEELAELEAELEELEAEREE 167
|
.
gi 1845979720 941 L 941
Cdd:COG1579 168 L 168
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
618-773 |
3.63e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 3.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 618 DNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL---------RASE 688
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnvrnnkeyEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 689 AERVAAEKARKFLEDELAKL--QASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNP- 765
Cdd:COG1579 96 KEIESLKRRISDLEDEILELmeRIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPe 175
|
....*...
gi 1845979720 766 LKDKYRDL 773
Cdd:COG1579 176 LLALYERI 183
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1784-2034 |
3.70e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.86 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1784 TRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAaelQARGKEAQLRHLNEQLKNLRTDL 1863
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVE---EAKTIKAEIEELTDELLNLVMDI 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1864 DNAHTDIRSLRDKEEQWDS--SRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQdmkddtd 1941
Cdd:PHA02562 251 EDPSAALNKLNTAAAKIKSkiEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAID------- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1942 klrrdltKAESVENELRKtidiQSKTSHEyqlLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVS 2021
Cdd:PHA02562 324 -------ELEEIMDEFNE----QSKKLLE---LKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELD 389
|
250
....*....|...
gi 1845979720 2022 ELQRQLQDANTEK 2034
Cdd:PHA02562 390 KIVKTKSELVKEK 402
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
355-1022 |
4.34e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.05 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 355 LSLEDENDRLRREFEryANDSK-----DKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSDLKTHTEEDLDKQK 429
Cdd:pfam10174 6 RDLQRENELLRRELD--IKESKlgssmNSIKTFWSPELKKERALRKEEAARISVLKEQYRVTQEENQHLQLTIQALQDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 430 aeftRAIRNVNNISrNAAFSAGAGDGLGLYGLEDGGDVN--RTTNNYEKVFIE------TIKRM-------NGTGGAGSA 494
Cdd:pfam10174 84 ----RAQRDLNQLL-QQDFTTSPVDGEDKFSTPELTEENfrRLQSEHERQAKElfllrkTLEEMelrietqKQTLGARDE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 495 SSADLLEELrkiRGGGSSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQG--ALKKLH 572
Cdd:pfam10174 159 SIKKLLEML---QSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKtkALQTVI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 573 EMA-------QDSEKNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENa 645
Cdd:pfam10174 236 EMKdtkisslERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLET- 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 646 dearrrLDKQFADAKREISNLQKSVDEAERnsrrtddklRAS------EAERVAAEKARKFLEDELAKLQASFQKSSTDD 719
Cdd:pfam10174 315 ------LTNQNSDCKQHIEVLKESLTAKEQ---------RAAilqtevDALRLRLEEKESFLNKKTKQLQDLTEEKSTLA 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 A--RKLRDEMDehtnsIQEEfktRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNST--------------QRR 783
Cdd:pfam10174 380 GeiRDLKDMLD-----VKER---KINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTdtalttleealsekERI 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 784 IEEKETQIRYSDDIRR----NIQKDLDDLREKYDRVHTD-NEKILGELEHAQKAAHLAEQQLKeikiqRDDYQKQKDEHA 858
Cdd:pfam10174 452 IERLKEQREREDRERLeeleSLKKENKDLKEKVSALQPElTEKESSLIDLKEHASSLASSGLK-----KDSKLKSLEIAV 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 859 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQtisdYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEI 938
Cdd:pfam10174 527 EQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRL----LEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKI 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 939 EKLNDLNQRLQKEkQDILNQKLKldgDVQALKEtiRKLENELEKLRNEnkelvgKEARARDAANQQLSRanlLNKELEDT 1018
Cdd:pfam10174 603 AELESLTLRQMKE-QNKKVANIK---HGQQEMK--KKGAQLLEEARRR------EDNLADNSQQLQLEE---LMGALEKT 667
|
....
gi 1845979720 1019 KQDL 1022
Cdd:pfam10174 668 RQEL 671
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
651-815 |
4.68e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.23 E-value: 4.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 651 RLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQASFQK--------SSTDDARK 722
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgnvRNNKEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 723 LRDEMDEHTNSIqEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRysdDIRRNIQ 802
Cdd:COG1579 94 LQKEIESLKRRI-SDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE---AEREELA 169
|
170
....*....|....
gi 1845979720 803 KDLD-DLREKYDRV 815
Cdd:COG1579 170 AKIPpELLALYERI 183
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1800-2226 |
4.70e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.61 E-value: 4.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1800 RRALESRLQ-SAKTLLRSQEEALKQRDEERRQMKSKMVAAELQA---RGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1875
Cdd:COG4717 44 RAMLLERLEkEADELFKPQGRKPELNLKELKELEEELKEAEEKEeeyAELQEELEELEEELEELEAELEELREELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1876 KEEQWDssrfqLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRlsdsKVQDMKDDTDKLRRDLTkaESVEN 1955
Cdd:COG4717 124 LLQLLP-----LYQELEALEAELAELPERLEELEERLEELRELEEELEELEA----ELAELQEELEELLEQLS--LATEE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1956 ELRKTIDiqsktshEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRvhdvnNRVSELQRQLQDANT--- 2032
Cdd:COG4717 193 ELQDLAE-------ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE-----ERLKEARLLLLIAAAlla 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2033 -----------------------------------EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELE 2077
Cdd:COG4717 261 llglggsllsliltiagvlflvlgllallflllarEKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2078 DLKRRLAQLENERRNSSQLSDGWKKEKItLLKKIELLENEKRRTDAAIRETALQ---REAIEKSLNAMERENKELYKNCA 2154
Cdd:COG4717 341 ELLDRIEELQELLREAEELEEELQLEEL-EQEIAALLAEAGVEDEEELRAALEQaeeYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 2155 QLQQQIAQLEMEngNRILELtNKQREEQERQLIRMRQEKGQIEKVIENRERthRNRIKQLEDQIAILRDQLD 2226
Cdd:COG4717 420 ELLEALDEEELE--EELEEL-EEELEELEEELEELREELAELEAELEQLEE--DGELAELLQELEELKAELR 486
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1432-2120 |
5.39e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1432 METDLTRLknrlksaEDALKELKNSLSHAKTEKER------LQNAFREKTKQAdHLNQLAsQFDTKLTKLRNELQDTNDK 1505
Cdd:COG1196 184 TEENLERL-------EDILGELERQLEPLERQAEKaeryreLKEELKELEAEL-LLLKLR-ELEAELEELEAELEELEAE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1506 LITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ---TTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDS 1582
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYellAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1583 TEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINfhtfvdggagyvdgvpggtsvigggpsaqrsgaydpSSGGVI 1662
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA------------------------------------ELAEAE 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1663 GSGISGGPGGSDFGREIEIGRGDsdqsdvayprsvpfppsadfssgrpgAASAGGRVINNLDgtttvnmnggfDIANLEG 1742
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQ--------------------------LEELEEAEEALLE-----------RLERLEE 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1743 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK 1822
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEA 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1823 QRDEERRQMKSKMVAAELQARGKE-------------AQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLET 1889
Cdd:COG1196 502 DYEGFLEGVKAALLLAGLRGLAGAvavligveaayeaALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDK 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1890 KMRESDSDTNKYQLQI----ASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQS 1965
Cdd:COG1196 582 IRARAALAAALARGAIgaavDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1966 KTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVE 2045
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEEL 741
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2046 kvvntMRTTETDLRQQLETAKNEKRVAT--KELEDLKRRLAQLE-------------NERRN--SSQLSDGwKKEKITLL 2108
Cdd:COG1196 742 -----LEEEELLEEEALEELPEPPDLEEleRELERLEREIEALGpvnllaieeyeelEERYDflSEQREDL-EEARETLE 815
|
730
....*....|..
gi 1845979720 2109 KKIELLENEKRR 2120
Cdd:COG1196 816 EAIEEIDRETRE 827
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1334-1592 |
5.69e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.74 E-value: 5.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1334 LKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELadtkgNLVQKEMD-LESTQNRLRSLEDQHSTLQSDANKWR 1412
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEY-----NNAMDDYNnLKSALNELSSLEDMKNRYESEIKTAE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1413 GELDAALRENdilksnntnmetdltrlkNRLKSAEDALKELKNSLSHAKteKERLQNAFREKtKQADHLNQLASQFDTKL 1492
Cdd:PRK01156 263 SDLSMELEKN------------------NYYKELEERHMKIINDPVYKN--RNYINDYFKYK-NDIENKKQILSNIDAEI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1493 TKLRN------ELQDTNDKLITSDTERNALRNELQKLSQ-ELKFGN-----EQIQRKSDEYQTTIDDLAhshrvSEDSRL 1560
Cdd:PRK01156 322 NKYHAiikklsVLQKDYNDYIKKKSRYDDLNNQILELEGyEMDYNSylksiESLKKKIEEYSKNIERMS-----AFISEI 396
|
250 260 270
....*....|....*....|....*....|....
gi 1845979720 1561 NALQEL--EARKYEINDLTSRLDSTEQRLATLQQ 1592
Cdd:PRK01156 397 LKIQEIdpDAIKKELNEINVKLQDISSKVSSLNQ 430
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
615-859 |
7.43e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 7.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 615 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseAERVAA 694
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL----GERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 695 EKARKFLEDELAKLQASfqKSSTDDARKLrdemdehtnsiqeefkTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLE 774
Cdd:COG3883 95 LYRSGGSVSYLDVLLGS--ESFSDFLDRL----------------SALSKIADADADLLEELKADKAELEAKKAELEAKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 775 NEYNSTQRRIEEKETQIrysDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQK 854
Cdd:COG3883 157 AELEALKAELEAAKAEL---EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*
gi 1845979720 855 DEHAR 859
Cdd:COG3883 234 AAAAA 238
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
520-711 |
8.46e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 8.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSlspgkt 599
Cdd:COG3883 40 DALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYLDVLLGSES------ 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 600 plpPSEALR--AVRNTFRNKDND-IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERN 676
Cdd:COG3883 114 ---FSDFLDrlSALSKIADADADlLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAE 190
|
170 180 190
....*....|....*....|....*....|....*
gi 1845979720 677 SRRTDDKLRASEAERVAAEKARKFLEDELAKLQAS 711
Cdd:COG3883 191 EAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1167-1343 |
9.80e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 9.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDK---------------- 1227
Cdd:COG3883 24 ELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDklqAEIAEAEAEIEERREElgeraralyrsggsvs 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1228 ----------------HLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQ 1291
Cdd:COG3883 104 yldvllgsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEAL 183
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1292 NQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAND 1343
Cdd:COG3883 184 LAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
605-901 |
1.00e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 47.20 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 605 EALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 684
Cdd:COG4372 66 EELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 685 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVN 764
Cdd:COG4372 146 AEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKD 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 765 PLKDKYRDLENEYNSTQRRIEEKETQIrySDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 844
Cdd:COG4372 226 SLEAKLGLALSALLDALELEEDKEELL--EEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLN 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 845 IQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYES 901
Cdd:COG4372 304 LAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1381-1743 |
1.06e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1381 VQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLsha 1460
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREEL--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1461 kteKERLQNAFREKTkQADHLNQL--ASQFDTKLTKL--RNELQDTNDKLItsdternalrNELQKLSQELKFGNEQIQR 1536
Cdd:COG3883 89 ---GERARALYRSGG-SVSYLDVLlgSESFSDFLDRLsaLSKIADADADLL----------EELKADKAELEAKKAELEA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1537 KSDEYQTTIDDLAhshrvsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1616
Cdd:COG3883 155 KLAELEALKAELE-----------AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAA 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1617 RVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYD-PSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPR 1695
Cdd:COG3883 224 AAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAgAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGS 303
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1845979720 1696 SVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGGFDIANLEGT 1743
Cdd:COG3883 304 GGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGG 351
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1414-1874 |
1.07e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1414 ELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDT--K 1491
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1492 LTKLRNELQDTN---DKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDEYQttiddlahshrvsEDSRLNALQELEA 1568
Cdd:COG4717 134 LEALEAELAELPerlEELEERLEELRELEEELEELEAEL----AELQEELEELL-------------EQLSLATEEELQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1569 RKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQ-----SSANRVINFHTFVDGGAGYVDGVPGGTSVIG 1643
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1644 GGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSDQSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNL 1723
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1724 DGtttvnMNGGFDIANLEGTLQSLLNKIeKLEMErNELRDTLARmkkkttetHTTINQKETRYRNIEDNLQDAEEERRAL 1803
Cdd:COG4717 357 EE-----LEEELQLEELEQEIAALLAEA-GVEDE-EELRAALEQ--------AEEYQELKEELEELEEQLEELLGELEEL 421
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1804 ESRLQ--SAKTLLRSQEEALKQRDEERRQMKSKM--VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLR 1874
Cdd:COG4717 422 LEALDeeELEEELEELEEELEELEEELEELREELaeLEAELEQLEEDGELAELLQELEELKAELRELAEEWAALK 496
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1266-1477 |
1.08e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 47.32 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1266 DSLNRE--NELEREKRDYDEKINSLygqNQKIKDEwDDFRNDADKeiqkwKTDAYTVRSEAKALETTNTA--LKAQLQAA 1341
Cdd:PHA02562 169 DKLNKDkiRELNQQIQTLDMKIDHI---QQQIKTY-NKNIEEQRK-----KNGENIARKQNKYDELVEEAktIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1342 NDRIDHLTKTVNDHTSKVRDLTsqvrhleDELADTKGNL--VQKEM--------------DLESTQNRLRSLEDQHSTLQ 1405
Cdd:PHA02562 240 TDELLNLVMDIEDPSAALNKLN-------TAAAKIKSKIeqFQKVIkmyekggvcptctqQISEGPDRITKIKDKLKELQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1406 ---SDANKWRGELdaALRENDI---------LKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFRE 1473
Cdd:PHA02562 313 hslEKLDTAIDEL--EEIMDEFneqskklleLKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDK 390
|
....
gi 1845979720 1474 KTKQ 1477
Cdd:PHA02562 391 IVKT 394
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
799-1046 |
1.10e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 46.83 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 799 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKaahlaeqQLKEIKIQRDDYQKQKDEharhlfdIRHKLETEIKGRQDL 878
Cdd:COG1340 4 DELSSSLEELEEKIEELREEIEELKEKRDELNE-------ELKELAEKRDELNAQVKE-------LREEAQELREKRDEL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 879 EKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT---TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQ--KEKQ 953
Cdd:COG1340 70 NEKVKELKEERDELNEKLNELREELDELRKELAELNKaggSIDKLRKEIERLEWRQQTEVLSPEEEKELVEKIKelEKEL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 954 DILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLE 1033
Cdd:COG1340 150 EKAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKEADELHKEIVEAQEKADELH 229
|
250
....*....|...
gi 1845979720 1034 QDIRDLKERLANI 1046
Cdd:COG1340 230 EEIIELQKELREL 242
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
620-1043 |
1.25e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 620 DIQQLERKLKIAES---QVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEK 696
Cdd:TIGR00618 387 QKTTLTQKLQSLCKeldILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 697 ARKFLEDELAKLQASFQKSStdDARKLRDEMDEHTNSIQEEFKTRIDELN-------------RRVENLLRENNRLKSEv 763
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQET--RKKAVVLARLLELQEEPCPLCGSCIHPNparqdidnpgpltRRMQRGEQTYAQLETS- 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 764 npLKDKYRDLENEYNSTQRrIEEKETQIRYSDDI----RRNIQKDLDDLREKYDRVHTDNEKilgELEHAQKAAHLAEQQ 839
Cdd:TIGR00618 544 --EEDVYHQLTSERKQRAS-LKEQMQEIQQSFSIltqcDNRSKEDIPNLQNITVRLQDLTEK---LSEAEDMLACEQHAL 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 840 LKEIKIQRDDYQK-----QKDEHARHLFDIRHKLETEI----------KGRQDLEKNGARNNDELDKL----RQTISDYE 900
Cdd:TIGR00618 618 LRKLQPEQDLQDVrlhlqQCSQELALKLTALHALQLTLtqervrehalSIRVLPKELLASRQLALQKMqsekEQLTYWKE 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 --SQINLLRRhndELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA---------- 968
Cdd:TIGR00618 698 mlAQCQTLLR---ELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFnnneevtaal 774
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 969 -----LKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANL----LNKELEDTKQDLKHSTDVNKQLEQDIRDL 1039
Cdd:TIGR00618 775 qtgaeLSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLqcetLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
|
....
gi 1845979720 1040 KERL 1043
Cdd:TIGR00618 855 EECS 858
|
|
| PRK10361 |
PRK10361 |
DNA recombination protein RmuC; Provisional |
1365-1525 |
1.48e-04 |
|
DNA recombination protein RmuC; Provisional
Pssm-ID: 182409 [Multi-domain] Cd Length: 475 Bit Score: 46.90 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1365 QVRHLEDELADtkgnlvQKEMDLESTQNRLRSLEDQHstlqsdankWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1444
Cdd:PRK10361 27 HAQQKAEQLAE------REEMVAELSAAKQQITQSEH---------WRAECELLNNEVRSLQSINTSLEADLREVTTRME 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1445 S----AEDALKELKNSLSHAKTEKERLQN-AFREKTKQADH-----LNQLASQFDTKLTKLRNELQDTNDKlitSDTERN 1514
Cdd:PRK10361 92 AaqqhADDKIRQMINSEQRLSEQFENLANrIFEHSNRRVDEqnrqsLNSLLSPLREQLDGFRRQVQDSFGK---EAQERH 168
|
170
....*....|.
gi 1845979720 1515 ALRNELQKLSQ 1525
Cdd:PRK10361 169 TLAHEIRNLQQ 179
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
528-1328 |
1.77e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 528 ESIERNIELESRgDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSE-KNVDGTVSIKRTRSLSPGKTPLPPSEA 606
Cdd:PTZ00121 1082 DAKEDNRADEAT-EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEaRKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 607 LRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKfenADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLRA 686
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRK---AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKK 1237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 687 SEAERVAAEKAR------KFLEDELAKLQASFQKSSTDDARKLR-----DEMDEHTNSIQEEFKTRIDELNRRVENllre 755
Cdd:PTZ00121 1238 DAEEAKKAEEERnneeirKFEEARMAHFARRQAAIKAEEARKADelkkaEEKKKADEAKKAEEKKKADEAKKKAEE---- 1313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 756 nnrlKSEVNPLKDKYRDLENEYNSTQRRIEEKEtqiRYSDDIRRNIQKDLDDLREKYDRVHTDNEKIlgelEHAQKAAHL 835
Cdd:PTZ00121 1314 ----AKKADEAKKKAEEAKKKADAAKKKAEEAK---KAAEAAKAEAEAAADEAEAAEEKAEAAEKKK----EEAKKKADA 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 836 AEQQLKEIKiqRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNgARNNDELDKLRQTISDYESQINLLRRHNDELDT 915
Cdd:PTZ00121 1383 AKKKAEEKK--KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK-AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 916 TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQAlkETIRKLENELEKLRNENKELVGKEA 995
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA--DEAKKAEEAKKADEAKKAEEAKKAD 1537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 996 RARDAanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDiRDLKERLANIGKggRISRDSTTGTDGGAFGDRSSVADPS 1075
Cdd:PTZ00121 1538 EAKKA--EEKKKADELKKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAK--KAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1076 RTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVihgRDGRDGRDAGNRGTHTITNTKERIERiEKNILDRYHDDELVEH 1155
Cdd:PTZ00121 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK---KKAEELKKAEEENKIKAAEEAKKAEE-DKKKAEEAKKAEEDEK 1688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1156 KIREVNDRWKRELERLENEKDDLERRIRELEdelsQIGRGNDKTENDITELKRKhaAEIDKLKSDisalhdkhlsDLDDE 1235
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAE----ELKKAEEENKIKAEEAKKE--AEEDKKKAE----------EAKKD 1752
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1236 KEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENE---LEREKRDYDEKINSLYGQ--NQKIKDEWDDFRNDADKEI 1310
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkrrMEVDKKIKDIFDNFANIIegGKEGNLVINDSKEMEDSAI 1832
|
810
....*....|....*...
gi 1845979720 1311 QKWKTDAYTVRSEAKALE 1328
Cdd:PTZ00121 1833 KEVADSKNMQLEEADAFE 1850
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
746-991 |
1.82e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.55 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 746 NRR--VENLL------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEekeTQIRYSDDIRRNIQKDLDDLREKYDRvHT 817
Cdd:PHA02562 151 ARRklVEDLLdisvlsEMDKLNKDKIRELNQQIQTLDMKIDHIQQQIK---TYNKNIEEQRKKNGENIARKQNKYDE-LV 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 818 DNEKILgeleHAQKAahLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGarnndELDKLRQTIS 897
Cdd:PHA02562 227 EEAKTI----KAEIE--ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGG-----VCPTCTQQIS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 898 DYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILN--------QKL--KLDGDVQ 967
Cdd:PHA02562 296 EGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITlvdkakkvKAAieELQAEFV 375
|
250 260
....*....|....*....|....
gi 1845979720 968 ALKETIRKLENELEKLRNENKELV 991
Cdd:PHA02562 376 DNAEELAKLQDELDKIVKTKSELV 399
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1840-2198 |
1.87e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1840 LQARGKEAQLRHLNE---QLKNLRTDLDNAHtdirSLRDKEEQW-DSSRFQLETKMRE----SDSDTNKYQLQIASFESE 1911
Cdd:pfam15921 68 IAYPGKEHIERVLEEyshQVKDLQRRLNESN----ELHEKQKFYlRQSVIDLQTKLQEmqmeRDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1912 RQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRkTIDIQSKTSHEYQLLKDQLLNTQNelngANNR 1991
Cdd:pfam15921 144 RNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIR-SILVDFEEASGKKIYEHDSMSTMH----FRSL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1992 KQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDA-----NTEKNRVEdRFLSVEKV--------VNTMRTTETDL 2058
Cdd:pfam15921 219 GSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKielllQQHQDRIE-QLISEHEVeitgltekASSARSQANSI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2059 RQQL----ETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDG--WKKEKITLLKKIELLENEKRRtDAAIRETALQR 2132
Cdd:pfam15921 298 QSQLeiiqEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDkiEELEKQLVLANSELTEARTER-DQFSQESGNLD 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 2133 EAIEKSLNAMERENKELyknCAQLQQQIAQLEMENGNRIL------ELTNKQREEQ--ERQLIRMRQE-KGQIEK 2198
Cdd:pfam15921 377 DQLQKLLADLHKREKEL---SLEKEQNKRLWDRDTGNSITidhlrrELDDRNMEVQrlEALLKAMKSEcQGQMER 448
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1732-2139 |
1.99e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1732 NGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTInqkETRYRNIEDNLQDAEEERRALESRLQSAK 1811
Cdd:COG4913 335 NGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEF---AALRAEAAALLEALEEELEALEEALAEAE 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1812 TLLRSQEEALKQRDEERRQMKSKMV---AAELQARgkeaqlRHLNEQLKNLRTDLDNA--HTDIRslrDKEEQW------ 1880
Cdd:COG4913 412 AALRDLRRELRELEAEIASLERRKSnipARLLALR------DALAEALGLDEAELPFVgeLIEVR---PEEERWrgaier 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1881 -----------------DSSRF----QLETKMRESDSDTNKYQLQIASFESERqiLTEKikeldgaLRLSDSKVQDMKDD 1939
Cdd:COG4913 483 vlggfaltllvppehyaAALRWvnrlHLRGRLVYERVRTGLPDPERPRLDPDS--LAGK-------LDFKPHPFRAWLEA 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1940 TDKLRRDLTKAESVEnELRK-----TIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQ--QLENELLNVRSEVRDYKQR 2012
Cdd:COG4913 554 ELGRRFDYVCVDSPE-ELRRhpraiTRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNRAKlaALEAELAELEEELAEAEER 632
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2013 VHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETD-------------LRQQLETAKNEKRVATKELEDL 2079
Cdd:COG4913 633 LEALEAELDALQERREALQRLAEYSWDE-IDVASAEREIAELEAElerldassddlaaLEEQLEELEAELEELEEELDEL 711
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2080 KRRLAQLENERRNSSQLsdgwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSL 2139
Cdd:COG4913 712 KGEIGRLEKELEQAEEE----LDELQDRLEAAEDLARLELRALLEERFAAALGDAVEREL 767
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
620-959 |
2.15e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 46.74 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 620 DIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKsvdeaerNSRRTDDKLRASEAERVAAEKARK 699
Cdd:pfam10174 381 EIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQT-------DSSNTDTALTTLEEALSEKERIIE 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 700 FLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQEEF---KTRIDELNRRVENL----LRENNRLKS---EVNPLKDK 769
Cdd:pfam10174 454 RLKEQREREDRERLEEL-ESLKKENKDLKEKVSALQPELtekESSLIDLKEHASSLassgLKKDSKLKSleiAVEQKKEE 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 770 YRDLENEYNSTQRRIEEKETQIRYSDDIrRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKiqrDD 849
Cdd:pfam10174 533 CSKLENQLKKAHNAEEAVRTNPEINDRI-RLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELE---SL 608
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 850 YQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdYESQINLLRRHNDELDTTikghQGKITHLEN 929
Cdd:pfam10174 609 TLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQ-LEELMGALEKTRQELDAT----KARLSSTQQ 683
|
330 340 350
....*....|....*....|....*....|
gi 1845979720 930 ELHSRSGEiekLNDLNQRLQKEKQDILNQK 959
Cdd:pfam10174 684 SLAEKDGH---LTNLRAERRKQLEEILEMK 710
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1320-1603 |
2.31e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.83 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1320 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSqVRHLEDELADTkgnlvqkEMDLESTQNRLRSLED 1399
Cdd:PRK11281 78 QKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLS-LRQLESRLAQT-------LDQLQNAQNDLAEYNS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1400 QHSTLQSDANKWRGELDAALRE----NDILKSNNTNMETDLTRLKNRLkSAEDALKELKNSLSHAKTE-KERLQNAFrek 1474
Cdd:PRK11281 150 QLVSLQTQPERAQAALYANSQRlqqiRNLLKGGKVGGKALRPSQRVLL-QAEQALLNAQNDLQRKSLEgNTQLQDLL--- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1475 TKQADHLNQLASQFDTKLTKLRNELqdtNDKLITSdTERNALRNELQKLSQELKfGNEQIQRksdeyqttidDLAHSHRV 1554
Cdd:PRK11281 226 QKQRDYLTARIQRLEHQLQLLQEAI---NSKRLTL-SEKTVQEAQSQDEAARIQ-ANPLVAQ----------ELEINLQL 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1845979720 1555 SEDsRLNALQELearkyeiNDLTSRLDSTEQRLATLQQdyikadSERDI 1603
Cdd:PRK11281 291 SQR-LLKATEKL-------NTLTQQNLRVKNWLDRLTQ------SERNI 325
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
605-1041 |
2.45e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.50 E-value: 2.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 605 EALRAVRNTFRNKDNDIQQLERKlKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKL 684
Cdd:TIGR00618 466 QSLKEREQQLQTKEQIHLQETRK-KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSE 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 685 RASEAERVAAEKARKFLEDELAKLQASFQKSSTDDARkLRDEMDEHTNsIQEEFKTRIDELNRRVENLLRENNRLKSEVN 764
Cdd:TIGR00618 545 EDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR-SKEDIPNLQN-ITVRLQDLTEKLSEAEDMLACEQHALLRKLQ 622
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 765 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRniqkdlDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIK 844
Cdd:TIGR00618 623 PEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQ------ERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWK 696
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 845 iqrddyqkqkdEHARHLFDIRHKLETEIKgrqdlekngarnndELDKLRQTISD-YESQINLLRRHNDELDTTIKGHQG- 922
Cdd:TIGR00618 697 -----------EMLAQCQTLLRELETHIE--------------EYDREFNEIENaSSSLGSDLAAREDALNQSLKELMHq 751
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 923 ---KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENEL---EKLRNENKELVGKEAR 996
Cdd:TIGR00618 752 artVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIpsdEDILNLQCETLVQEEE 831
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1845979720 997 ardaanQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1041
Cdd:TIGR00618 832 ------QFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
520-780 |
2.55e-04 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 45.02 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEknvdgtvsikrtrslspgkt 599
Cdd:pfam00261 18 KEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKLEEAEKAADESE-------------------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 600 plppsEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFEnadEARRRLdkqfadakreisnlqksvDEAERNSRR 679
Cdd:pfam00261 78 -----RGRKVLENRALKDEEKMEILEAQLKEAKEIAEEADRKYE---EVARKL------------------VVVEGDLER 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 680 TDDKLRASEAERVAAEKARKFLEDELAKLQASFQKSStddarKLRDEMDEHTNSIQEEFK---TRIDELNRRVENLLREN 756
Cdd:pfam00261 132 AEERAELAESKIVELEEELKVVGNNLKSLEASEEKAS-----EREDKYEEQIRFLTEKLKeaeTRAEFAERSVQKLEKEV 206
|
250 260
....*....|....*....|....
gi 1845979720 757 NRLKSEVNPLKDKYRDLENEYNST 780
Cdd:pfam00261 207 DRLEDELEAEKEKYKAISEELDQT 230
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
698-959 |
2.56e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.16 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 698 RKFLEDELA-KLQASFQKSSTDDARKLRDE---MDEHTNSIQEEFKTRIDELNRrvenlLRENNrlKSEVNPLKDKYRDL 773
Cdd:PHA02562 153 RKLVEDLLDiSVLSEMDKLNKDKIRELNQQiqtLDMKIDHIQQQIKTYNKNIEE-----QRKKN--GENIARKQNKYDEL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 774 ENEYNSTQRRIEEKETQIRysddirrNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAE---------QQLKEik 844
Cdd:PHA02562 226 VEEAKTIKAEIEELTDELL-------NLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEkggvcptctQQISE-- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 845 iQRDDYQKQKDEharhLFDIRHKLETEIKGRQDLEKNgarnNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKI 924
Cdd:PHA02562 297 -GPDRITKIKDK----LKELQHSLEKLDTAIDELEEI----MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAI 367
|
250 260 270
....*....|....*....|....*....|....*
gi 1845979720 925 THLENELHSRSGEIEKLNDLNQRLQKEKQDILNQK 959
Cdd:PHA02562 368 EELQAEFVDNAEELAKLQDELDKIVKTKSELVKEK 402
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1370-1734 |
2.56e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1370 EDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDA 1449
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1450 LKELKNSLSHAktekERLQNA--FREKTKQADHLNQLASQFDTKLtklrNELQDTNDKLITSDTERNALRNELQKLSQEL 1527
Cdd:COG3883 95 LYRSGGSVSYL----DVLLGSesFSDFLDRLSALSKIADADADLL----EELKADKAELEAKKAELEAKLAELEALKAEL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1528 KFGNEQIQRKSDEYQTTIDDLAhshrVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDA 1607
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLS----AEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1608 LRrfQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSAQRSGAYDPSSGGVIGSGISGGPGGSDFGREIEIGRGDSD 1687
Cdd:COG3883 243 AA--SAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAG 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1845979720 1688 QSDVAYPRSVPFPPSADFSSGRPGAASAGGRVINNLDGTTTVNMNGG 1734
Cdd:COG3883 321 AVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGV 367
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
520-710 |
2.74e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 520 KELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLH-EMAQDSEKNVDGTVSIKRTRSLSPGK 598
Cdd:COG4942 44 AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRaELEAQKEELAELLRALYRLGRQPPLA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 599 TPLPPSEALRAVRNT------FRNKDNDIQQLERKLKIAESQVKEflnkfenADEARRRLDKQFADAKREISNLQKSVDE 672
Cdd:COG4942 124 LLLSPEDFLDAVRRLqylkylAPARREQAEELRADLAELAALRAE-------LEAERAELEALLAELEEERAALEALKAE 196
|
170 180 190
....*....|....*....|....*....|....*...
gi 1845979720 673 AERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQA 710
Cdd:COG4942 197 RQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1752-2079 |
2.76e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.04 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1752 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK-------QR 1824
Cdd:pfam07888 69 EQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDIKtltqrvlER 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1825 DEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQ 1904
Cdd:pfam07888 149 ETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1905 IASFESerqiLTEKIKELDGALRLSDSKVQDMKDDTDKL--RRDLTKAEsvenelrktidiqsktSHEYQLLKDQLLNTQ 1982
Cdd:pfam07888 229 EAENEA----LLEELRSLQERLNASERKVEGLGEELSSMaaQRDRTQAE----------------LHQARLQAAQLTLQL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1983 NELN-----GANNRKQQLENELLNVRSEvrdyKQRVHDVNNRVSELQRQLQDANTEKNRVEDRfLSVEKVVNTMRTTETd 2057
Cdd:pfam07888 289 ADASlalreGRARWAQERETLQQSAEAD----KDRIEKLSAELQRLEERLQEERMEREKLEVE-LGREKDCNRVQLSES- 362
|
330 340
....*....|....*....|..
gi 1845979720 2058 lRQQLETAKNEKRVATKELEDL 2079
Cdd:pfam07888 363 -RRELQELKASLRVAQKEKEQL 383
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
1735-1979 |
2.83e-04 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 46.22 E-value: 2.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1735 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEE----ERRALESRLQSA 1810
Cdd:pfam05622 211 FEYKKLEEKLEALQKEKERLIIERDTLRETNEELRCAQLQQAELSQADALLSPSSDPGDNLAAEimpaEIREKLIRLQHE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1811 KTLLR-SQEEALKQRDEERRQMkskMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLET 1889
Cdd:pfam05622 291 NKMLRlGQEGSYRERLTELQQL---LEDANRRKNELETQNRLANQRILELQQQVEELQKALQEQGSKAEDSSLLKQKLEE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1890 ---KMRESDSDTNKYQLQIASFESERQI-LTEKIKELDGALRLSDskvQDMKDDTDKLRRDLTKAESVenelRKTID--I 1963
Cdd:pfam05622 368 hleKLHEAQSELQKKKEQIEELEPKQDSnLAQKIDELQEALRKKD---EDMKAMEERYKKYVEKAKSV----IKTLDpkQ 440
|
250
....*....|....*.
gi 1845979720 1964 QSKTSHEYQLLKDQLL 1979
Cdd:pfam05622 441 NPASPPEIQALKNQLL 456
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
1806-2086 |
3.02e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.00 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1806 RLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNlrtDLDNAhtdiRSLRDKEEQwdsSRF 1885
Cdd:pfam09726 399 RLEQDIKKLKAELQASRQTEQELRSQISSLTSLERSLKSELGQLRQENDLLQT---KLHNA----VSAKQKDKQ---TVQ 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1886 QLETKMRESDSDTNKYQLQIASfESERqilteKIKELDGALRLSDSKVQDMKDDTDKLRRdltKAESVENELRKTidiqs 1965
Cdd:pfam09726 469 QLEKRLKAEQEARASAEKQLAE-EKKR-----KKEEEATAARAVALAAASRGECTESLKQ---RKRELESEIKKL----- 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1966 ktSHEYQLLKDQLlntqnelngannrkQQLENELlnvrSEVRDYKQRVHDVNNRVSELQrqlqdANTEKNRVEDRFLSVE 2045
Cdd:pfam09726 535 --THDIKLKEEQI--------------RELEIKV----QELRKYKESEKDTEVLMSALS-----AMQDKNQHLENSLSAE 589
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1845979720 2046 KVVN-TMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQL 2086
Cdd:pfam09726 590 TRIKlDLFSALGDAKRQLEIAQGQIYQKDQEIKDLKQKIAEV 631
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
892-1046 |
3.05e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 45.86 E-value: 3.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 892 LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRsgEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKE 971
Cdd:PRK12705 39 LQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQR--EEERLVQKEEQLDARAEKLDNLENQLEEREKALSA 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 972 TIRKLENELEKLRNENKELVGKEaraRDAANQQLsrANLLNKELEDTKQDLKhstdvnKQLEQDIRDLKERLANI 1046
Cdd:PRK12705 117 RELELEELEKQLDNELYRVAGLT---PEQARKLL--LKLLDAELEEEKAQRV------KKIEEEADLEAERKAQN 180
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
517-1039 |
3.37e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 517 ELHKELMTKYEESIER----NIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKnvdgtvSIKRTR 592
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRsqllTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEE------QLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 593 SLSPGKTPLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESqVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDE 672
Cdd:TIGR00618 261 LLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKA-VTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 673 AERNSRRTDDKLRASEAERVAAEKARKFLEdelaklQASFQKSSTDDARKLRD--EMDEHTNSIQEEFKTRIDELNRRVE 750
Cdd:TIGR00618 340 IEEQRRLLQTLHSQEIHIRDAHEVATSIRE------ISCQQHTLTQHIHTLQQqkTTLTQKLQSLCKELDILQREQATID 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 751 NLLRENNRLKSEVNPLKdKYRDLENEYNSTQRRIEEKETQI-----------RYSDDIRRNIQKDLDDLREKYDRVHTDN 819
Cdd:TIGR00618 414 TRTSAFRDLQGQLAHAK-KQQELQQRYAELCAAAITCTAQCeklekihlqesAQSLKEREQQLQTKEQIHLQETRKKAVV 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 820 EKILGELEHAQKA-------AHLAEQQLKEIKIQRDDYQKQKDEHARH---LFDIRHKLETEIKGRQDLEKNGARNNDEL 889
Cdd:TIGR00618 493 LARLLELQEEPCPlcgscihPNPARQDIDNPGPLTRRMQRGEQTYAQLetsEEDVYHQLTSERKQRASLKEQMQEIQQSF 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 890 DKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSrsgEIEKLNDlnqrlQKEKQDILNQKLKLDGDVQAL 969
Cdd:TIGR00618 573 SILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHA---LLRKLQP-----EQDLQDVRLHLQQCSQELALK 644
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 970 KETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNK--ELEDTKQDLKHSTDVNKQLEQDIRDL 1039
Cdd:TIGR00618 645 LTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEkeQLTYWKEMLAQCQTLLRELETHIEEY 716
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
839-1047 |
3.51e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 45.66 E-value: 3.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 839 QLKEIKIQRDDYQKQKDEHARHLFDIRHK-LETEIkgrQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTI 917
Cdd:pfam07888 48 QAQEAANRQREKEKERYKRDREQWERQRReLESRV---AELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQR 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 918 KGHQGKITHLENELHS-------RSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKEL 990
Cdd:pfam07888 125 AAHEARIRELEEDIKTltqrvleRETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQR 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 991 VGKEARARDAAN---QQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIG 1047
Cdd:pfam07888 205 DTQVLQLQDTITtltQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMA 264
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1789-2226 |
3.77e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.10 E-value: 3.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1789 IEDNLQDAE----EERRALEsrlqsAKTLLRSQEEALKQRDEErrqmKSKMVAAelqargkeAQLRHLNEQLKNLRTDLD 1864
Cdd:COG3096 227 VRKAFQDMEaalrENRMTLE-----AIRVTQSDRDLFKHLITE----ATNYVAA--------DYMRHANERRELSERALE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1865 NAhtdiRSLRDKEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQILTEKIKELDGALRLSDsKVQDMKDDTDKLR 1944
Cdd:COG3096 290 LR----RELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQDYQAASDHLNLVQTALRQQE-KIERYQEDLEELT 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1945 RDLTKAESVENELRKTIDIQSKTSH----EYQLLKDQLLNTQNELNGANNR--------------KQQLENELL---NVR 2003
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEaaeeEVDSLKSQLADYQQALDVQQTRaiqyqqavqalekaRALCGLPDLtpeNAE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2004 SEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETD--LRQQLETAKNEKRVATK------E 2075
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWqtARELLRRYRSQQALAQRlqqlraQ 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2076 LEDLKRRLAQLENERRNSSQLSDGWKKEkitlLKKIELLENEKRRTDAAIRE-TALQREAIEKsLNAMERENKELyknca 2154
Cdd:COG3096 521 LAELEQRLRQQQNAERLLEEFCQRIGQQ----LDAAEELEELLAELEAQLEElEEQAAEAVEQ-RSELRQQLEQL----- 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2155 qlqqqiaqlemenGNRILELTNKQ---REEQERqLIRMRQEKGQI----EKVIENRERTHRN--RIKQLEDQIAILRDQL 2225
Cdd:COG3096 591 -------------RARIKELAARApawLAAQDA-LERLREQSGEAladsQEVTAAMQQLLERerEATVERDELAARKQAL 656
|
.
gi 1845979720 2226 D 2226
Cdd:COG3096 657 E 657
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1976-2362 |
3.79e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1976 DQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE----KNRVEDRFLSVEKVVNTM 2051
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEiaeaEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2052 RTTETDLR--QQLETAKNekrvatkeLEDLKRRLAQLenerrnsSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETA 2129
Cdd:COG3883 96 YRSGGSVSylDVLLGSES--------FSDFLDRLSAL-------SKIADADADLLEELKADKAELEAKKAELEAKLAELE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2130 LQREAIEKSLNAMERENKELykncaqlqqqiaqlemengNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2209
Cdd:COG3883 161 ALKAELEAAKAELEAQQAEQ-------------------EALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2210 RIKQLEDQIAILRDQLDGERRRRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTP 2289
Cdd:COG3883 222 AAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAASG 301
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2290 PLGSSTPTHRPHVTDFRSAVDAGSSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2362
Cdd:COG3883 302 GSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGGGGGSSGGGSGGGGGGGGGGGGSSSGGGGGGVGLSVGGG 374
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
797-1219 |
4.00e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 4.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 797 IRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLEteikgRQ 876
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-----KL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 877 DLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKghqgKITHLENELHSRSGEI-EKLNDLNQRLQKEKQDI 955
Cdd:COG4717 122 EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEE----ELEELEAELAELQEELeELLEQLSLATEEELQDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 956 LNQKLKLDGDVQALKETIRKLENELEKLRNENKELvgKEARARDAANQQLSRANLL------------------------ 1011
Cdd:COG4717 198 AEELEELQQRLAELEEELEEAQEELEELEEELEQL--ENELEAAALEERLKEARLLlliaaallallglggsllslilti 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1012 --------------------NKELEDTKQDLKHSTDVNKQLEQdiRDLKERLANIGKGGRISRDSTTGtdggAFGDRSSV 1071
Cdd:COG4717 276 agvlflvlgllallflllarEKASLGKEAEELQALPALEELEE--EELEELLAALGLPPDLSPEELLE----LLDRIEEL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1072 ADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIH-GRDGRDGRDAGNRgthtITNTKERIERIEKNILD--RYH 1148
Cdd:COG4717 350 QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAaLEQAEEYQELKEE----LEELEEQLEELLGELEEllEAL 425
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 1149 DDELVEHKIREVndrwKRELERLENEKDDLERRIRELEDELSQIGrgndkTENDITELKRKHAAEIDKLKS 1219
Cdd:COG4717 426 DEEELEEELEEL----EEELEELEEELEELREELAELEAELEQLE-----EDGELAELLQELEELKAELRE 487
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
511-1044 |
4.05e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.81 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 511 SSEGDAELHKELMTKYEESIERNIELESRGDDSQRKIAELEAEL------RRNREKLNEA---------QGALKKLHEMA 575
Cdd:TIGR00606 228 SKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIkalksrKKQMEKDNSElelkmekvfQGTDEQLNDLY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 576 QD--------SEKNVDGTVSI----KRTRSLSPGKTPLppseALRAVRNTFRNKDNDIQQLERKLKIAESQVKEFLNKFE 643
Cdd:TIGR00606 308 HNhqrtvrekERELVDCQRELeklnKERRLLNQEKTEL----LVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 644 NAdearrrldkqfADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVA-AEKARKFLEDELAKLQASFQKSS------ 716
Cdd:TIGR00606 384 RG-----------PFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERlKQEQADEIRDEKKGLGRTIELKKeilekk 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 717 TDDARKLRDEMDEHTNS------IQEEFKTRIDELNRRVENLLRENnrLKSEVNPLKDKYRDLENeynsTQRRIEEKETQ 790
Cdd:TIGR00606 453 QEELKFVIKELQQLEGSsdrileLDQELRKAERELSKAEKNSLTET--LKKEVKSLQNEKADLDR----KLRKLDQEMEQ 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 791 IRYSDDIRRNIQKDLDDLREKYDRVHTDNEK-------ILGELEHAQKAAHLAEQQLKEIKIQRDDYQK-----QKDEHA 858
Cdd:TIGR00606 527 LNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhsdeltsLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKlnkelASLEQN 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 859 RHLFDIRHKLETE-----------IKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDT------------ 915
Cdd:TIGR00606 607 KNHINNELESKEEqlssyedklfdVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDenqsccpvcqrv 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 916 --TIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILnqklkldGDVQALKETIRKLENELEKLRNENKELVGK 993
Cdd:TIGR00606 687 fqTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEML-------GLAPGRQSIIDLKEKEIPELRNKLQKVNRD 759
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 1845979720 994 EARARDAANQQLSRANLLNKELEDTKqDLKHSTDVNKQLEQDIRDLKERLA 1044
Cdd:TIGR00606 760 IQRLKNDIEEQETLLGTIMPEEESAK-VCLTDVTIMERFQMELKDVERKIA 809
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
838-1041 |
4.13e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 838 QQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIkgrqdlekngARNNDELDKLRQTISDYESQINLLrrhNDEldtti 917
Cdd:PHA02562 181 QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI----------ARKQNKYDELVEEAKTIKAEIEEL---TDE----- 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 918 kghqgkITHLENELHSRSGEIEKLNDLNQRLqKEKQDILNQKLKL--DGDV-QALKETIRKLENELEKLRNENKEL---- 990
Cdd:PHA02562 243 ------LLNLVMDIEDPSAALNKLNTAAAKI-KSKIEQFQKVIKMyeKGGVcPTCTQQISEGPDRITKIKDKLKELqhsl 315
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 991 ------VGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1041
Cdd:PHA02562 316 ekldtaIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQA 372
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1743-2149 |
4.40e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.81 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1743 TLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERraleSRLQSAKTLLRSQEEALK 1822
Cdd:TIGR00606 204 EHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNL----SKIMKLDNEIKALKSRKK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1823 QRDEERRQMKSKMVAAelqARGKEAQLRHLNE----QLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDT 1898
Cdd:TIGR00606 280 QMEKDNSELELKMEKV---FQGTDEQLNDLYHnhqrTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1899 NKYQLQIASFESERQILTEKIkELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQL 1978
Cdd:TIGR00606 357 DRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEK 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1979 LNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQD-------ANTEKNRVEDRFLSVEKVvnTM 2051
Cdd:TIGR00606 436 KGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElskaeknSLTETLKKEVKSLQNEKA--DL 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2052 RTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSD------GWKKEKITLLKKIELLENEKRRTDAAI 2125
Cdd:TIGR00606 514 DRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDeltsllGYFPNKKQLEDWLHSKSKEINQTRDRL 593
|
410 420
....*....|....*....|....
gi 1845979720 2126 RETALQREAIEKSLNAMERENKEL 2149
Cdd:TIGR00606 594 AKLNKELASLEQNKNHINNELESK 617
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1186-2212 |
4.52e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.55 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1186 EDELSQIGRGNDKTENDITELKRKHAaeidKLKSDISALHDKhlsdLDDEKEQYGKAVE---NLKSVEDDLRDKLNNLEK 1262
Cdd:pfam01576 11 EEELQKVKERQQKAESELKELEKKHQ----QLCEEKNALQEQ----LQAETELCAEAEEmraRLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1263 QLADSLNRENELEREKRDYDEKINSLYGQnqkiKDEWDDFRNDAdkEIQKWKTDAYTVRSEAK--ALETTNTALKAQLQA 1340
Cdd:pfam01576 83 RLEEEEERSQQLQNEKKKMQQHIQDLEEQ----LDEEEAARQKL--QLEKVTTEAKIKKLEEDilLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1341 ANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrGELDAALR 1420
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQI----AELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1421 EndiLKSNNTNMETDLTRLKNRLK-------SAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQlasqfdtKLT 1493
Cdd:pfam01576 233 E---LRAQLAKKEEELQAALARLEeetaqknNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGE-------ELE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1494 KLRNELQDTNDKLITSD---TERNALRNELQK-LSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEAR 1569
Cdd:pfam01576 303 ALKTELEDTLDTTAAQQelrSKREQEVTELKKaLEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1570 KYEINDLTSRLDSTEQRLATLQQDYIKADSERDIL----SDALRRFQSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGG 1645
Cdd:pfam01576 383 ESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELqarlSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKD 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1646 PSAQRSGAYDPSSGGVIGSGISGGPGGSDfgREIEIGRG-------DSDQSDVAYPRSVPFPPSADFSSGRPGAASAGgr 1718
Cdd:pfam01576 463 VSSLESQLQDTQELLQEETRQKLNLSTRL--RQLEDERNslqeqleEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAG-- 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1719 vinNLDGTTTVNMNGGFDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQD--- 1795
Cdd:pfam01576 539 ---TLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEeka 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1796 -----AEEERRA-LESRLQSAK--TLLRSQEEALKQRDEERRQMKskMVAAELQA-------------------RGKEAQ 1848
Cdd:pfam01576 616 isaryAEERDRAeAEAREKETRalSLARALEEALEAKEELERTNK--QLRAEMEDlvsskddvgknvhelerskRALEQQ 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1849 LRHLNEQLKNLRTDLDNAHTDI---------------RSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQ 1913
Cdd:pfam01576 694 VEEMKTQLEELEDELQATEDAKlrlevnmqalkaqfeRDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKK 773
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1914 ILTEKIKEL----DGALRLSDSKVQDMKD---DTDKLRRDLTKAESVenelRKTIDIQSKTSH-EYQLLKDQLLNTQNEL 1985
Cdd:pfam01576 774 KLELDLKELeaqiDAANKGREEAVKQLKKlqaQMKDLQRELEEARAS----RDEILAQSKESEkKLKNLEAELLQLQEDL 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1986 NGANNRKQQLENELLNVRSEV----------RDYKQRVHDvnnRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTE 2055
Cdd:pfam01576 850 AASERARRQAQQERDELADEIasgasgksalQDEKRRLEA---RIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTEL 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2056 TDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKkiELLENEK----------RRTDAAI 2125
Cdd:pfam01576 927 AAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE--EQLEQESrerqaanklvRRTEKKL 1004
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2126 RETALQREAiekslnamERENKELYKncaqlqqqiaqlemengnrileltnkqrEEQERQLIRMRQEKGQIEKVIENRER 2205
Cdd:pfam01576 1005 KEVLLQVED--------ERRHADQYK----------------------------DQAEKGNSRMKQLKRQLEEAEEEASR 1048
|
....*..
gi 1845979720 2206 THRNRIK 2212
Cdd:pfam01576 1049 ANAARRK 1055
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1796-2118 |
4.63e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1796 AEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRD 1875
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1876 KEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGAlrlsdSKVQDMKDDTDKLRRdltKAESV-- 1953
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA-----KKAEELKKKEAEEKK---KAEELkk 1723
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1954 ENELRKTIDIQSKTSHEYQLLKDQLLNTQnelNGANNRKQQLENELLNVRSEVRDYKQRV------HDVNNRVSELQRQL 2027
Cdd:PTZ00121 1724 AEEENKIKAEEAKKEAEEDKKKAEEAKKD---EEEKKKIAHLKKEEEKKAEEIRKEKEAVieeeldEEDEKRRMEVDKKI 1800
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2028 QDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDgwkKEKITL 2107
Cdd:PTZ00121 1801 KDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFN---KEKDLK 1877
|
330
....*....|.
gi 1845979720 2108 LKKIELLENEK 2118
Cdd:PTZ00121 1878 EDDEEEIEEAD 1888
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
815-1046 |
4.94e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.30 E-value: 4.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 815 VHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKdeharhlfdIRHKLETEIKgRQDLEKNGARNNDELDKLRQ 894
Cdd:PRK05771 31 VHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLN---------PLREEKKKVS-VKSLEELIKDVEEELEKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 895 TISDYESQINllrrhndELDTTIKGHQGKITHLE----------NELHSRS-----GEIEKLNDLNQRLQKEKQDILNQK 959
Cdd:PRK05771 101 EIKELEEEIS-------ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYvsvfvGTVPEDKLEELKLESDVENVEYIS 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 960 LKLDGD---VQALKETIRKLENELEKLRNENKELVGKEaRARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDI 1036
Cdd:PRK05771 174 TDKGYVyvvVVVLKELSDEVEEELKKLGFERLELEEEG-TPSELIREIKEELEEIEKERESLLEELK---ELAKKYLEEL 249
|
250
....*....|
gi 1845979720 1037 RDLKERLANI 1046
Cdd:PRK05771 250 LALYEYLEIE 259
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
661-1346 |
5.13e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 5.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 661 REISNLQKSVDEAERNSRRTDDKLRASEAErvaAEKARKFLEDELAKLQaSFQKSSTDDARKLRDEMDEHTNSIQEEFKT 740
Cdd:pfam05483 78 RLYSKLYKEAEKIKKWKVSIEAELKQKENK---LQENRKIIEAQRKAIQ-ELQFENEKVSLKLEEEIQENKDLIKENNAT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 741 R--IDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSD-DIRRNIQKD---LDDLREKYDR 814
Cdd:pfam05483 154 RhlCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARlEMHFKLKEDhekIQHLEEEYKK 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 815 VHTDNEKILG-------ELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKGRQDLEKNGARNND 887
Cdd:pfam05483 234 EINDKEKQVSllliqitEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 888 ELDK--------LRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLND----LNQRLQKEKQDi 955
Cdd:pfam05483 314 ALEEdlqiatktICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDqlkiITMELQKKSSE- 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 956 LNQKLKLDGDVQALKETIRKLENELEKLRNENKElVGKEARARDAANQQLS-RANLLNKELEDTKQDLKHSTDVNKQLEQ 1034
Cdd:pfam05483 393 LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQ-FEKIAEELKGKEQELIfLLQAREKEIHDLEIQLTAIKTSEEHYLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1035 DIRDLKERLANigkggrisrDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDiesrgggeidipssgdvihgrd 1114
Cdd:pfam05483 472 EVEDLKTELEK---------EKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQE---------------------- 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1115 grdgrdagnrgthTITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGR 1194
Cdd:pfam05483 521 -------------DIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEK 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1195 GNDKTENDITELKRK---HAAEIDKLKSDISALHDKHLSD---LDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADS- 1267
Cdd:pfam05483 588 QMKILENKCNNLKKQienKNKNIEELHQENKALKKKGSAEnkqLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKk 667
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1268 LNREN---ELEREKRDYDE--------------KINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETT 1330
Cdd:pfam05483 668 ISEEKlleEVEKAKAIADEavklqkeidkrcqhKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIE 747
|
730
....*....|....*.
gi 1845979720 1331 NTALKAQLQAANDRID 1346
Cdd:pfam05483 748 LSNIKAELLSLKKQLE 763
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1169-1472 |
5.23e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 5.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1169 ERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAaeidklksdisalhdkhLSDLDDEKEQYgkaVENLks 1248
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNG-----------------LVDLSEEAKLL---LQQL-- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1249 veDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLygqnqkikdewddfrnDADKEIQkwktdaytvrseakale 1328
Cdd:COG3206 222 --SELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL----------------LQSPVIQ----------------- 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1329 ttntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD-TKGNLVQKEMDLESTQNRLRSLEDQHSTLQSD 1407
Cdd:COG3206 267 ----QLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQeAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1408 ANKwrgeldaalrendilksnNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFR 1472
Cdd:COG3206 343 LAE------------------LPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
495-1501 |
5.34e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.81 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 495 SSADLLEELRKIRGGGSSEGDA-ELHKELMTKYEESIERNIELesrgDDSQRKIAELEAELRRNREK--LNEAQGALKKL 571
Cdd:TIGR01612 1299 NISDIREKSLKIIEDFSEESDInDIKKELQKNLLDAQKHNSDI----NLYLNEIANIYNILKLNKIKkiIDEVKEYTKEI 1374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 572 HEmaqdSEKNVDGTVSiKRTRSLSPGKTPLPPSEALRAVRNTFRNKDND-----IQQLERKLKIAESQVKEFlnkFENAD 646
Cdd:TIGR01612 1375 EE----NNKNIKDELD-KSEKLIKKIKDDINLEECKSKIESTLDDKDIDecikkIKELKNHILSEESNIDTY---FKNAD 1446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 647 EARRRLDKQFADAKREiSNLQKSVDEAERNSRRTDDKLRASEAERvAAEKARKFledelaKLQASFQKSSTDDARKL--- 723
Cdd:TIGR01612 1447 ENNENVLLLFKNIEMA-DNKSQHILKIKKDNATNDHDFNINELKE-HIDKSKGC------KDEADKNAKAIEKNKELfeq 1518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 724 -RDEMDEHTNSIQE-EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNI 801
Cdd:TIGR01612 1519 yKKDVTELLNKYSAlAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDI 1598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 802 QKDLDDLREKYDRVHTDNEKILGELEHAQKaahlAEQQLKEIKIQRDDYQKQKDEharhlfDIRHKLETEIKGRQDLEKN 881
Cdd:TIGR01612 1599 QLSLENFENKFLKISDIKKKINDCLKETES----IEKKISSFSIDSQDTELKENG------DNLNSLQEFLESLKDQKKN 1668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 882 GARNNDELDKLRQTISDYESQINLLRRhNDELDTTIKGHQGKITHlENELHSRSGEIE----------KLNDL-----NQ 946
Cdd:TIGR01612 1669 IEDKKKELDELDSEIEKIEIDVDQHKK-NYEIGIIEKIKEIAIAN-KEEIESIKELIEptienlissfNTNDLegidpNE 1746
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 947 RLQK---EKQDILNQKLKLDGDVQALKETIRKLENELEKLRN-----ENKELVGKEARARDAANQQLSRANLLNKELEDT 1018
Cdd:TIGR01612 1747 KLEEyntEIGDIYEEFIELYNIIAGCLETVSKEPITYDEIKNtrinaQNEFLKIIEIEKKSKSYLDDIEAKEFDRIINHF 1826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1019 KQDLKHstdVNKQLEQDIRDLKERLANIGKGGRISRDSTtgtdggafgDRSSVADP-SRTRGAAGSTV---FVPAAEDIE 1094
Cdd:TIGR01612 1827 KKKLDH---VNDKFTKEYSKINEGFDDISKSIENVKNST---------DENLLFDIlNKTKDAYAGIIgkkYYSYKDEAE 1894
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1095 SRGGGEIDIPSSGDV-IHGRDGRD-----------GRDAGNRGTHTITNTKERIERIEKNILDRYhdDELVEhKIREVND 1162
Cdd:TIGR01612 1895 KIFINISKLANSINIqIQNNSGIDlfdniniailsSLDSEKEDTLKFIPSPEKEPEIYTKIRDSY--DTLLD-IFKKSQD 1971
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1163 RWKRELERLE--NEKDDLERRIR---ELEDELSQIGRGNDKTENDITELKRKhAAEIDKLKSDiSALHDK--HLSDLDDE 1235
Cdd:TIGR01612 1972 LHKKEQDTLNiiFENQQLYEKIQasnELKDTLSDLKYKKEKILNDVKLLLHK-FDELNKLSCD-SQNYDTilELSKQDKI 2049
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1236 KEQ---YGKAVENLKSVED--DLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND----A 1306
Cdd:TIGR01612 2050 KEKidnYEKEKEKFGIDFDvkAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKELTEAFNTEikiiE 2129
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1307 DKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAAN------------------DRIDHLTKTVNDHTSKVR---DLTSQ 1365
Cdd:TIGR01612 2130 DKIIEKNDLIDKLIEMRKECLLFSYATLVETLKSKVinhsefitsaakfskdffEFIEDISDSLNDDIDALQikyNLNQT 2209
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1366 VRHLEDELADT---KGNLVQKEMDLESTQNRLRSLedqhstLQSDANKwrgeLDAalrenDILKSNNTNMetdlTRLKNR 1442
Cdd:TIGR01612 2210 KKHMISILADAtkdHNNLIEKEKEATKIINNLTEL------FTIDFNN----ADA-----DILHNNKIQI----IYFNSE 2270
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1443 LKSAEDALKELKNSLSHAKTEKERLQNA-FREKTKQADHLNQLASQfdtKLTKLRNELQD 1501
Cdd:TIGR01612 2271 LHKSIESIKKLYKKINAFKLLNISHINEkYFDISKEFDNIIQLQKH---KLTENLNDLKE 2327
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
720-1019 |
5.38e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 45.23 E-value: 5.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 ARKLRDEMDEHTNSIQEEfktrIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNsTQR-----RIEEKETQIRY- 793
Cdd:pfam06160 84 AKKALDEIEELLDDIEED----IKQILEELDELLESEEKNREEVEELKDKYRELRKTLL-ANRfsygpAIDELEKQLAEi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 794 ------------------SDDIRRNIQKDLDDLREKYDRV------------------------------HTDNEKILGE 825
Cdd:pfam06160 159 eeefsqfeeltesgdyleAREVLEKLEEETDALEELMEDIpplyeelktelpdqleelkegyremeeegyALEHLNVDKE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 826 LEHAQKAAHLAEQQLKEIKIQR-----DDYQKQKDeharHLFDIrhkLETEIKGRQDLEKNGARNNDELDKLRQTisdye 900
Cdd:pfam06160 239 IQQLEEQLEENLALLENLELDEaeealEEIEERID----QLYDL---LEKEVDAKKYVEKNLPEIEDYLEHAEEQ----- 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 901 sqinllrrhNDELDTtikghqgKITHL-------ENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL---KLDGDVQALK 970
Cdd:pfam06160 307 ---------NKELKE-------ELERVqqsytlnENELERVRGLEKQLEELEKRYDEIVERLEEKEVaysELQEELEEIL 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1845979720 971 ETIRKLENELEKLRNENKELVGKEARARDAANQqlsranlLNKELEDTK 1019
Cdd:pfam06160 371 EQLEEIEEEQEEFKESLQSLRKDELEAREKLDE-------FKLELREIK 412
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1317-1612 |
5.46e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 5.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1317 AYTVRSEAKALETTNTALKA-QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELAD--TKGNLVQKEMDLESTQNR 1393
Cdd:COG3206 141 SYTSPDPELAAAVANALAEAyLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEfrQKNGLVDLSEEAKLLLQQ 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1394 LRSLEDQHSTLQSDANkwrgELDAALRendilksnntnmetdltRLKNRLKSAEDALKELKNSlshaktekERLQNAfre 1473
Cdd:COG3206 221 LSELESQLAEARAELA----EAEARLA-----------------ALRAQLGSGPDALPELLQS--------PVIQQL--- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1474 ktkqadhLNQLAsQFDTKLTKLRNELQDTNDKLItsdternALRNELQKLSQELKfgnEQIQRKSDEYQTTIDDLAhshr 1553
Cdd:COG3206 269 -------RAQLA-ELEAELAELSARYTPNHPDVI-------ALRAQIAALRAQLQ---QEAQRILASLEAELEALQ---- 326
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1554 vsedsrlNALQELEARKYEINDLTSRLDSTEQRLATLQQDYikaDSERDILSDALRRFQ 1612
Cdd:COG3206 327 -------AREASLQAQLAQLEARLAELPELEAELRRLEREV---EVARELYESLLQRLE 375
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1181-1395 |
5.52e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1181 RIRELEDELSQIgrgndktENDITELKRkhaaEIDKLKSDISALHDKhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNL 1260
Cdd:COG4942 21 AAAEAEAELEQL-------QQEIAELEK----ELAALKKEEKALLKQ-LAALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1261 EKQLADSlnrENELEREKRDYDEKINSLY--GQNQKIK-----DEWDDFR---------NDADKE-IQKWKTDAYTVRSE 1323
Cdd:COG4942 89 EKEIAEL---RAELEAQKEELAELLRALYrlGRQPPLAlllspEDFLDAVrrlqylkylAPARREqAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1324 AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADtkgnLVQKEMDLESTQNRLR 1395
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE----LQQEAEELEALIARLE 233
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1126-1385 |
5.76e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1126 THTITNTKERIERIEKNILDryhddelVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1205
Cdd:PHA02562 187 DMKIDHIQQQIKTYNKNIEE-------QRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNK 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1206 LKRKHA---AEIDKLKSDISALHDKH-----LSDLDDEKEQYGKavenlksveddLRDKLNNLEKQLADSLNRENELERE 1277
Cdd:PHA02562 260 LNTAAAkikSKIEQFQKVIKMYEKGGvcptcTQQISEGPDRITK-----------IKDKLKELQHSLEKLDTAIDELEEI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1278 KRDYDEKINSLYGQNQKIKDEwddfrndadkeiqkwKTDAYTVRSEAKALEttntalkaqlqaanDRIDHLTKTVNDHTS 1357
Cdd:PHA02562 329 MDEFNEQSKKLLELKNKISTN---------------KQSLITLVDKAKKVK--------------AAIEELQAEFVDNAE 379
|
250 260
....*....|....*....|....*...
gi 1845979720 1358 KVrdltSQVRHLEDELADTKGNLVQKEM 1385
Cdd:PHA02562 380 EL----AKLQDELDKIVKTKSELVKEKY 403
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1167-1312 |
6.03e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.76 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1167 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHA---AEIDKLKSDISALHDKhlsdLDDEKEQYG--- 1240
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEdleKEIKRLELEIEEVEAR----IKKYEEQLGnvr 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 1241 --KAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQK 1312
Cdd:COG1579 87 nnKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1737-2142 |
6.35e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.29 E-value: 6.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1737 IANLEGTLQsLLNKIEKLEMERNELRDTlarmkkkttethttinqketryrniednLQDAEEERRALESRLQSAKtllrs 1816
Cdd:PRK11281 62 QQDLEQTLA-LLDKIDRQKEETEQLKQQ----------------------------LAQAPAKLRQAQAELEALK----- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1817 qeealKQRDEERRQMKSKMVAAELQARgkeaqLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRE--- 1893
Cdd:PRK11281 108 -----DDNDEETRETLSTLSLRQLESR-----LAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQirn 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1894 --SDSDTNKYQL---QIASFESERQILTEKI----KELDGALRLSdskvqdmkdDTDKLRRDLTKAEsvenelrktidiQ 1964
Cdd:PRK11281 178 llKGGKVGGKALrpsQRVLLQAEQALLNAQNdlqrKSLEGNTQLQ---------DLLQKQRDYLTAR------------I 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1965 SKTSHEYQLLKDqLLNTQNeLNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSE-LQRQLQDAN--TEKNrvedrf 2041
Cdd:PRK11281 237 QRLEHQLQLLQE-AINSKR-LTLSEKTVQEAQSQDEAARIQANPLVAQELEINLQLSQrLLKATEKLNtlTQQN------ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2042 LSVEKVVNTMRTTETDL--------------------RQQLETAKNEKRVAtKELEDLkrRLAQLE-NERRNssQLSDGw 2100
Cdd:PRK11281 309 LRVKNWLDRLTQSERNIkeqisvlkgslllsrilyqqQQALPSADLIEGLA-DRIADL--RLEQFEiNQQRD--ALFQP- 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2101 kKEKITllkkiELLENEKRRTDAAIRETALQ-----REAIE---KSLNAM 2142
Cdd:PRK11281 383 -DAYID-----KLEAGHKSEVTDEVRDALLQllderRELLDqlnKQLNNQ 426
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1887-2235 |
6.44e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 6.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1887 LETKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMK----------DDTDKLRRDLTKAES-VEN 1955
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKsalnelssleDMKNRYESEIKTAESdLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1956 ELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENE---LLNVRSEVRDYkqrvHDVNNRVSELQRQLQDANT 2032
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKkqiLSNIDAEINKY----HAIIKKLSVLQKDYNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2033 EKNRVEDrflsVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIE 2112
Cdd:PRK01156 344 KKSRYDD----LNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQ 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2113 LLENEKRRTDAAIRETALQREAIEKSLNAMERENK---------ELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQE 2183
Cdd:PRK01156 420 DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpvcgttlgEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKI 499
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 2184 RQLIRM--RQEKGQIEKVI--ENRERTHRNRIKQLEDQIAILRDQLDGERRRRREY 2235
Cdd:PRK01156 500 VDLKKRkeYLESEEINKSIneYNKIESARADLEDIKIKINELKDKHDKYEEIKNRY 555
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
720-1041 |
6.73e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.89 E-value: 6.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 720 ARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLEN-------EYNSTQRRIEEKETQIR 792
Cdd:pfam07888 53 ANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAsseelseEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 793 -YSDDIRRNIQK------DLDDLREKYDRVH-------TDNEKILGELEHAQKAAHLAEQQLKEIKiqrdDYQKQKDEHA 858
Cdd:pfam07888 133 eLEEDIKTLTQRvleretELERMKERAKKAGaqrkeeeAERKQLQAKLQQTEEELRSLSKEFQELR----NSLAQRDTQV 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 859 RHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISDYESQINLLRRhndELDTTIkghqGKITHLENELHSRSGEI 938
Cdd:pfam07888 209 LQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGE---ELSSMA----AQRDRTQAELHQARLQA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 939 EKLN----DLNQRL-------QKEKQDiLNQKLKLDGD-VQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLS 1006
Cdd:pfam07888 282 AQLTlqlaDASLALregrarwAQERET-LQQSAEADKDrIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLS 360
|
330 340 350
....*....|....*....|....*....|....*
gi 1845979720 1007 RAnllNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1041
Cdd:pfam07888 361 ES---RRELQELKASLRVAQKEKEQLQAEKQELLE 392
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
2007-2226 |
6.87e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2007 RDYKQRVHDVNNRVSELQRQLQDANTEKNRV-------EDRFLSvEKVVNTMRTT--ETDLRQQLETAKNEKRVATKELE 2077
Cdd:COG3206 107 EDPLGEEASREAAIERLRKNLTVEPVKGSNVieisytsPDPELA-AAVANALAEAylEQNLELRREEARKALEFLEEQLP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2078 DLKRRLAQLENER---RNSSQLSDGwKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCA 2154
Cdd:COG3206 186 ELRKELEEAEAALeefRQKNGLVDL-SEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2155 QLQQQIAQLEMENgnRILELTNK----------QREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQ 2224
Cdd:COG3206 265 IQQLRAQLAELEA--ELAELSARytpnhpdviaLRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
..
gi 1845979720 2225 LD 2226
Cdd:COG3206 343 LA 344
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1129-1537 |
7.12e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 7.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNIlDRYHDDelveHKIREVNDRWKRELERLENEKDDLERRIRELEDE-------LSQIGRGNDKTEN 1201
Cdd:PRK01156 307 IENKKQILSNIDAEI-NKYHAI----IKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYemdynsyLKSIESLKKKIEE 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1202 DITELKRKHA--AEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNR--------- 1270
Cdd:PRK01156 382 YSKNIERMSAfiSEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvcpvcgtt 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1271 --ENELEREKRDYDEKINSLygqNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHL 1348
Cdd:PRK01156 462 lgEEKSNHIINHYNEKKSRL---EEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKI 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1349 TKTVNDHTsKVRDLTSQVRHLEDELADTK------GNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL--DAALR 1420
Cdd:PRK01156 539 NELKDKHD-KYEEIKNRYKSLKLEDLDSKrtswlnALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFpdDKSYI 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1421 ENDILKsnntnMETDLTRLKNRLKSAED---ALKELKNSLSHAKTEKERLQnafrEKTKQADHLNQLASQFDTKLTKLRN 1497
Cdd:PRK01156 618 DKSIRE-----IENEANNLNNKYNEIQEnkiLIEKLRGKIDNYKKQIAEID----SIIPDLKEITSRINDIEDNLKKSRK 688
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1845979720 1498 ELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRK 1537
Cdd:PRK01156 689 ALDDAKANRARLESTIEILRTRINELSDRINDINETLESM 728
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1748-2110 |
7.22e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 7.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1748 LNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALEsRLQSAKTLLRSQEEALKQRDEE 1827
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE-ELKKAEEENKIKAAEEAKKAEE 1672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1828 RRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1907
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1908 FESERQILTEKIKELDGALRLSDSKVQDMKDDTDKlrRDLTKAESVEnelRKTIDIQSKTSHEYQLLKDQLLNTQNELNG 1987
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE--EDEKRRMEVD---KKIKDIFDNFANIIEGGKEGNLVINDSKEM 1827
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1988 ANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDrflSVEKVVNTMRTTETDlRQQLETAKN 2067
Cdd:PTZ00121 1828 EDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED---DEEEIEEADEIEKID-KDDIEREIP 1903
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1845979720 2068 EKRVATKELEDLKRRLAQLENERRNSSQLsdgwKKEKITLLKK 2110
Cdd:PTZ00121 1904 NNNMAGKNNDIIDDKLDKDEYIKRDAEET----REEIIKISKK 1942
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1953-2222 |
8.04e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1953 VENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANT 2032
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2033 EKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITllKKIE 2112
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAE--QALD 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2113 LLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQE 2192
Cdd:COG4372 187 ELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELA 266
|
250 260 270
....*....|....*....|....*....|
gi 1845979720 2193 KGQIEKVIENRERTHRNRIKQLEDQIAILR 2222
Cdd:COG4372 267 ILVEKDTEEEELEIAALELEALEEAALELK 296
|
|
| Tht1 |
pfam04163 |
Tht1-like nuclear fusion protein; |
1228-1487 |
8.06e-04 |
|
Tht1-like nuclear fusion protein;
Pssm-ID: 282073 Cd Length: 595 Bit Score: 44.82 E-value: 8.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1228 HLSDLDDEKEQYGKAVENL----KSVEDDLRDKLNNLEKQLA-DSLNRENELEREKRDYDEKINSLYGQNQKI-KDEWDD 1301
Cdd:pfam04163 153 REALLEFEKELIIELFLNItelqDQFGDDLDMKILHLMFQMEqDFENFLDDLAQMFDKFDGEFNNATESNRIIiENDFKD 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1302 FRNDADKEIQKWktdaytvrSEAKALETTNTALKAQLQAANDRIdhltktvndhTSKVRDLTSQVRHLEDELADTKGNLV 1381
Cdd:pfam04163 233 FNFKVNDEIMGL--------VELENHEQEGMVLEKEIIEKIKQL----------KNEIDDIHHFFADFADELAGYKNDII 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1382 QKEMDLESTQnrlrsledQHSTLQSDANKWRGELDAALRENdilksnntnmetdltrLKNRLKSAEDALKE-LKNSLSHA 1460
Cdd:pfam04163 295 EKINDLKDDS--------ENAIALSAIGKYTSEFSAFMEKN----------------IKDLIEMSEDSLKEsVQRNIDFV 350
|
250 260
....*....|....*....|....*..
gi 1845979720 1461 KTEKERLQNAFREKTKQADHLNQLASQ 1487
Cdd:pfam04163 351 NSGFQELEDFSIGLKEELGGLKKDLSE 377
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1795-2145 |
8.17e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 8.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1795 DAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMvaAELQARGKEAQL---RHLNEQLKNLRTDLDNAHTDIR 1871
Cdd:COG3096 833 DPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQL--QLLNKLLPQANLladETLADRLEELREELDAAQEAQA 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1872 SLRDKEEQWDssrfQLETKMRESDSDTNKY-QLQIASFE--SERQILTEKIKELD------GALRLSDS-----KVQDMk 1937
Cdd:COG3096 911 FIQQHGKALA----QLEPLVAVLQSDPEQFeQLQADYLQakEQQRRLKQQIFALSevvqrrPHFSYEDAvgllgENSDL- 985
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1938 ddTDKLRRDLTKAESVENELRKTI-DIQSKTSHEYQLLKDqllntqneLNGANNRKQQLENELLN--------------- 2001
Cdd:COG3096 986 --NEKLRARLEQAEEARREAREQLrQAQAQYSQYNQVLAS--------LKSSRDAKQQTLQELEQeleelgvqadaeaee 1055
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2002 -VRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVntmrtteTDLRQQLETAKN------------- 2067
Cdd:COG3096 1056 rARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDY-------KQEREQVVQAKAgwcavlrlardnd 1128
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2068 -EKRVATKEL-----EDLKR---------RLAQLENER-RNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQ 2131
Cdd:COG3096 1129 vERRLHRRELaylsaDELRSmsdkalgalRLAVADNEHlRDALRLSEDPRRPERKVQFYIAVYQHLRERIRQDIIRTDDP 1208
|
410
....*....|....
gi 1845979720 2132 REAIEKslnaMERE 2145
Cdd:COG3096 1209 VEAIEQ----MEIE 1218
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1743-2208 |
9.61e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 9.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1743 TLQSLLNKIEKLEMERNELRDTLARMKKKttethttinqketryrnIEDNLQDAEEERRALESRLQSAKTLLRSQEEALK 1822
Cdd:TIGR00618 404 ILQREQATIDTRTSAFRDLQGQLAHAKKQ-----------------QELQQRYAELCAAAITCTAQCEKLEKIHLQESAQ 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1823 QRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLR-------------TDLDNAHTDIRSLRDKEEQWDSSRFQLET 1889
Cdd:TIGR00618 467 SLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCplcgscihpnparQDIDNPGPLTRRMQRGEQTYAQLETSEED 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1890 KMRESDSDTNKyqlqiasfeseRQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRdltkaesVENELRKTIDIQSKtsh 1969
Cdd:TIGR00618 547 VYHQLTSERKQ-----------RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQN-------ITVRLQDLTEKLSE--- 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1970 eyqlLKDQLLntqnELNGANNRKQQLENELLNVRSEVRDYKQRvhdvnnrvselqrqLQDANTEKNRvedrflsvekvvn 2049
Cdd:TIGR00618 606 ----AEDMLA----CEQHALLRKLQPEQDLQDVRLHLQQCSQE--------------LALKLTALHA------------- 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2050 tmrtTETDLRQQLETAKnEKRVATKELEDLKRRLAQLENERRNSSQLSdGWKKE---KITLLKKIELLENEKRR------ 2120
Cdd:TIGR00618 651 ----LQLTLTQERVREH-ALSIRVLPKELLASRQLALQKMQSEKEQLT-YWKEMlaqCQTLLRELETHIEEYDRefneie 724
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2121 --TDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQliRMRQEKGQIEK 2198
Cdd:TIGR00618 725 naSSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN--RLREEDTHLLK 802
|
490
....*....|
gi 1845979720 2199 VIENRERTHR 2208
Cdd:TIGR00618 803 TLEAEIGQEI 812
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1268-1613 |
9.80e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.35 E-value: 9.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1268 LNRENELEREKRDYDEKINSLYGQNQKIKDewddfrnDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDR--- 1344
Cdd:pfam05557 12 SQLQNEKKQMELEHKRARIELEKKASALKR-------QLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKkky 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1345 IDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQ---SDANKWRGELDAALRE 1421
Cdd:pfam05557 85 LEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKakaSEAEQLRQNLEKQQSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1422 ndiLKSNNTNMETdltrLKNRLKSAEDALKELKNSlshaKTEKERLQNAFREKTKQADHLNQLASQFDTKLTkLRNELQD 1501
Cdd:pfam05557 165 ---LAEAEQRIKE----LEFEIQSQEQDSEIVKNS----KSELARIPELEKELERLREHNKHLNENIENKLL-LKEEVED 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1502 TNDKLITSDTERNALRN---ELQKLSQELKFGNEQIQRKSDEYQTTID-----------DLAHSHRVS---------EDS 1558
Cdd:pfam05557 233 LKRKLEREEKYREEAATlelEKEKLEQELQSWVKLAQDTGLNLRSPEDlsrrieqlqqrEIVLKEENSsltssarqlEKA 312
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1559 RLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQS 1613
Cdd:pfam05557 313 RRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDK 367
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1165-2145 |
1.03e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1165 KRELERLENekdDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEID---KL---KSDISALHDKHLSDLDDEKEQ 1238
Cdd:pfam01576 70 KQELEEILH---ELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqKLqleKVTTEAKIKKLEEDILLLEDQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1239 YGKAVENLKSVEddlrDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYG---QNQKIKDEWDDFRNDADKEIQKWKT 1315
Cdd:pfam01576 147 NSKLSKERKLLE----ERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEErlkKEEKGRQELEKAKRKLEGESTDLQE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1316 DAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDeladtkgnlvqkemDLESTQNRLR 1395
Cdd:pfam01576 223 QIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQE--------------DLESERAARN 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1396 SLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRL----KSAEDALKELKNSLSHAKTE-KERLQNA 1470
Cdd:pfam01576 289 KAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALeeetRSHEAQLQEMRQKHTQALEElTEQLEQA 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1471 FR-----EKTKQA------------DHLNQLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQ 1533
Cdd:pfam01576 369 KRnkanlEKAKQAlesenaelqaelRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1534 IQRKSDEYQTTIDDLAhshrvSEDSRLNALQEL--EARKYEINdLTSRLDSTEQRLATLQQdyiKADSERDILSDALRRF 1611
Cdd:pfam01576 449 LNEAEGKNIKLSKDVS-----SLESQLQDTQELlqEETRQKLN-LSTRLRQLEDERNSLQE---QLEEEEEAKRNVERQL 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1612 QSSANRVINFHTFVDGGAGYVDGVPGGTSVIGGGPSA------QRSGAYDPSSGGVIGSGISGGPGGSDFGRE------I 1679
Cdd:pfam01576 520 STLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEAltqqleEKAAAYDKLEKTKNRLQQELDDLLVDLDHQrqlvsnL 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1680 EIGRGDSDQSdVAYPRSVpfppSADFSSGRPGA-ASAGGRVINNLdgtttvnmnggfdiaNLEGTLQSLLNKIEKLEMER 1758
Cdd:pfam01576 600 EKKQKKFDQM-LAEEKAI----SARYAEERDRAeAEAREKETRAL---------------SLARALEEALEAKEELERTN 659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1759 NELRdtlARMkkkttetHTTINQKEtryrNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAA 1838
Cdd:pfam01576 660 KQLR---AEM-------EDLVSSKD----DVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQAL 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1839 ------ELQARGK--EAQLRHLNEQLKNLRTDLDNAhtdirslRDKEEQWDSSRFQLETKMRESDSDTN----------- 1899
Cdd:pfam01576 726 kaqferDLQARDEqgEEKRRQLVKQVRELEAELEDE-------RKQRAQAVAAKKKLELDLKELEAQIDaankgreeavk 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1900 ---KYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAE-----------SVENELRKTIDIQS 1965
Cdd:pfam01576 799 qlkKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASErarrqaqqerdELADEIASGASGKS 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1966 KTSHEYQLLKDQLLNTQNELNGANN---------RKQQLENELLNVR-SEVRDYKQRvhdVNNRVSELQRQLQDANTEKN 2035
Cdd:pfam01576 879 ALQDEKRRLEARIAQLEEELEEEQSntellndrlRKSTLQVEQLTTElAAERSTSQK---SESARQQLERQNKELKAKLQ 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2036 RVEDRFLSVEKvvNTMRTTETDLRQ---QLETAKNEKRVATKEL----EDLKRRLAQLENERRNSSQLSDGWKKEKI--- 2105
Cdd:pfam01576 956 EMEGTVKSKFK--SSIAALEAKIAQleeQLEQESRERQAANKLVrrteKKLKEVLLQVEDERRHADQYKDQAEKGNSrmk 1033
|
1050 1060 1070 1080
....*....|....*....|....*....|....*....|..
gi 1845979720 2106 TLLKKIELLENEKRRTDAAIREtaLQREAIE--KSLNAMERE 2145
Cdd:pfam01576 1034 QLKRQLEEAEEEASRANAARRK--LQRELDDatESNESMNRE 1073
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1791-2205 |
1.04e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1791 DNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMKSKMVAAELQArgKEAQLRHLNEQLKNLRTDLDNAHTDI 1870
Cdd:TIGR00606 393 KNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIEL--KKEILEKKQEELKFVIKELQQLEGSS 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1871 RSLRDKEEQWDSSRFQLEtkMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKA 1950
Cdd:TIGR00606 471 DRILELDQELRKAERELS--KAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKD 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1951 ESV-ENELRKTIDIQS----------------KTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRV 2013
Cdd:TIGR00606 549 EQIrKIKSRHSDELTSllgyfpnkkqledwlhSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKL 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2014 HDV------NNRVSELQRQLQDANTE------KNRVEDRFL--------SVEKVVNTMRTTETDLRQQLETAKNEKRVAT 2073
Cdd:TIGR00606 629 FDVcgsqdeESDLERLKEEIEKSSKQramlagATAVYSQFItqltdenqSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2074 KELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNA------------ 2141
Cdd:TIGR00606 709 DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTimpeeesakvcl 788
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 2142 -----MERENKELYKNCAQLQQQIAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRER 2205
Cdd:TIGR00606 789 tdvtiMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQE 857
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
1126-1575 |
1.08e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 44.82 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1126 THTITNTKERIERIEKNILDRYHDDELveHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITE 1205
Cdd:PTZ00440 2163 SEAVTNSEEIIENIKKEIIEINENTEM--NTLENTADKLKELYENLKKKKNIINNIYKKINFIKLQEIENSSEKYNDISK 2240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1206 LKRKhaaEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRD----- 1280
Cdd:PTZ00440 2241 LFNN---VVETQKKKLLDNKNKINNIKDKINDKEKELINVDSSFTLESIKTFNEIYDDIKSNIGDLYKLEDTNNDelkkv 2317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1281 --YDEKINSLYGQNQKIKDEWDDFRNDA---DKEIQKWKTDAYTVRSEAKALETTNTALKAQLQaandrIDHLTKTVNDH 1355
Cdd:PTZ00440 2318 klYIENITHLLNRINTLINDLDNYQDENygkDKNIELNNENNSYIIKTKEKINNLKEEFSKLLK-----NIKRNNTLCNN 2392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1356 TSKVRDLTSQVRHLEDELADTKGNLVQKE--MDLESTQNRLRSL---EDQHSTLQSDANKWRGELDAALRENDILKSNNT 1430
Cdd:PTZ00440 2393 NNIKDFISNIGKSVETIKQRFSSNLPEKEklHQIEENLNEIKNImneTKRISNVDAFTNKILQDIDNEKNKENNNMNAEK 2472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1431 --NMETDLTRLKNRLKSAedaLKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLIT 1508
Cdd:PTZ00440 2473 idDLIENVTSHNEKIKSE---LLIINDALRRVKEKKDEMNKLFNSLTENNNNNNNSAKNIVDNSTYIINELESHVSKLNE 2549
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1509 ----SDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSH-RVSEDSRLNALQELEARKYEIND 1575
Cdd:PTZ00440 2550 llsyIDNEIKELENEKLKLLEKAKIEESRKERERIESETQEDNTDEEQiNRQQQERLQKEEEQKAYSQERLN 2621
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1133-1262 |
1.12e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1133 KERIERIEKNILDRYHDDELVEHKIREVNDRwKRELERLENEKDDLERRIRELEDELSqigrgndKTENDITELKRKHAA 1212
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRL-EEQVERLEAEVEELEAELEEKDERIE-------RLERELSEARSEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1213 EIDKlksdisalhDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEK 1262
Cdd:COG2433 460 EIRK---------DREISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
860-996 |
1.20e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 43.47 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 860 HLFDIRHKLETEIKG----RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHNDELDttiKGHQGKITHLENELHSRS 935
Cdd:smart00787 141 LLEGLKEGLDENLEGlkedYKLLMKELELLNSIKPKLRDRKDALEEELRQLKQLEDELE---DCDPTELDRAKEKLKKLL 217
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 936 GEIE----KLNDLNQRLQKEKQDIlnqklkldGDVQALKETIRKLENELEKLRNENKELVGKEAR 996
Cdd:smart00787 218 QEIMikvkKLEELEEELQELESKI--------EDLTNKKSELNTEIAEAEKKLEQCRGFTFKEIE 274
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1815-2136 |
1.26e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1815 RSQEEALKQRDEERRQMKSKMVAAELQARgkeaqlRHLNEQLKNLRTDLDNAHTdIRSLRDK---EEQWDSSRFQLETKM 1891
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKAREVERR------RKLEEAEKARQAEMDRQAA-IYAEQERmamERERELERIRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1892 RESDsdtnkyqlQIASFESERQIltEKIKELDgalRLSDSKVQdmkdDTDKLRRDLTKAESVE-NELRKTIDIQSKTSHE 1970
Cdd:pfam17380 360 RELE--------RIRQEEIAMEI--SRMRELE---RLQMERQQ----KNERVRQELEAARKVKiLEEERQRKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1971 YQLLKDQLLNTQNELngaNNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKnrvEDRFLSVEKVVNT 2050
Cdd:pfam17380 423 EQIRAEQEEARQREV---RRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEK---RDRKRAEEQRRKI 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2051 MRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQ------LENERRNSSQLsdgwkKEKITLLKKIELLENEKRRTDAA 2124
Cdd:pfam17380 497 LEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEeerrreAEEERRKQQEM-----EERRRIQEQMRKATEERSRLEAM 571
|
330
....*....|..
gi 1845979720 2125 IRETALQREAIE 2136
Cdd:pfam17380 572 EREREMMRQIVE 583
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
940-1046 |
1.26e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.42 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 940 KLNDLNQRLQKEKQdilnQKLKLDGDVQALKETIRKLENELEKLRNENKELvgkeARARDAANQqlsRANLLNKELEDTK 1019
Cdd:PRK09039 61 QIAELADLLSLERQ----GNQDLQDSVANLRASLSAAEAERSRLQALLAEL----AGAGAAAEG---RAGELAQELDSEK 129
|
90 100 110
....*....|....*....|....*....|.
gi 1845979720 1020 Q----DLKHSTDVNKQLEQdirdLKERLANI 1046
Cdd:PRK09039 130 QvsarALAQVELLNQQIAA----LRRQLAAL 156
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1740-2226 |
1.27e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1740 LEGTLqsLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDA--------EEERRALESRLQSAK 1811
Cdd:TIGR02169 223 YEGYE--LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1812 TLLRSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKM 1891
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1892 RESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQ----SKT 1967
Cdd:TIGR02169 381 AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQewklEQL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1968 SHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHD--------------VNNRVSEL-----QRQLQ 2028
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraveevlkasiqgVHGTVAQLgsvgeRYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2029 DANTEKNR-----VED--------RFLSVEKV-------VNTMRTTETDLR----------------------------- 2059
Cdd:TIGR02169 541 IEVAAGNRlnnvvVEDdavakeaiELLKRRKAgratflpLNKMRDERRDLSilsedgvigfavdlvefdpkyepafkyvf 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2060 ------QQLETAKN----------------------------------------EKRVATKELEDLKRRLAQLENERRNS 2093
Cdd:TIGR02169 621 gdtlvvEDIEAARRlmgkyrmvtlegelfeksgamtggsraprggilfsrsepaELQRLRERLEGLKRELSSLQSELRRI 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2094 SQLSDGWK-------KEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNCAQLQQQIAQLE-- 2164
Cdd:TIGR02169 701 ENRLDELSqelsdasRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEea 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2165 ------MENGNRILELTNKQRE-------------EQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQL 2225
Cdd:TIGR02169 781 lndleaRLSHSRIPEIQAELSKleeevsriearlrEIEQKLNRLTLEKEYLEKEIQELQ----EQRIDLKEQIKSIEKEI 856
|
.
gi 1845979720 2226 D 2226
Cdd:TIGR02169 857 E 857
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
2072-2224 |
1.29e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2072 ATKELEDLKRRLAQLENERRNSSQLSDGWKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMERENKEL-- 2149
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELra 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2150 ----------------YKNCAQLQQQ-----IAQLEMENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHR 2208
Cdd:COG4942 98 eleaqkeelaellralYRLGRQPPLAlllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170
....*....|....*.
gi 1845979720 2209 NRIKQLEDQIAILRDQ 2224
Cdd:COG4942 178 ALLAELEEERAALEAL 193
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
497-862 |
1.47e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 497 ADLLEELRKIRGGGSSEGDAELhKELMTKYEESIERNIELESRGDDSQRKIAELEAELRRNREKLnEAQGALKKLHEMAQ 576
Cdd:COG4717 173 AELQEELEELLEQLSLATEEEL-QDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL-EAAALEERLKEARL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 577 DSekNVDGTVSIKRTRSLSPGKTPLPPSEALRAVRNTFRNkdnDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQF 656
Cdd:COG4717 251 LL--LIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLAL---LFLLLAREKASLGKEAEELQALPALEELEEEELEELL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 657 ADAKREISNLQKSVDEAERNSRRTDDKLRasEAERVAAEKARKFLEDELAKLQASFQKSSTDD----------ARKLRDE 726
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELLR--EAEELEEELQLEELEQEIAALLAEAGVEDEEElraaleqaeeYQELKEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 727 MDEHTNSIQEEFKTRIDELNRRV-ENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDdirrnIQKDL 805
Cdd:COG4717 404 LEELEEQLEELLGELEELLEALDeEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE-----LLQEL 478
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 806 DDLREKydrvhtdnekiLGELEHAQKAAHLAEQQLKE-IKIQRDDYQKQKDEHARHLF 862
Cdd:COG4717 479 EELKAE-----------LRELAEEWAALKLALELLEEaREEYREERLPPVLERASEYF 525
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
747-1410 |
1.47e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.06 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 747 RRVENLLRENNRLKSEVNPLKDkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDD-LREKYDRVHTDNEKILGE 825
Cdd:pfam12128 234 AGIMKIRPEFTKLQQEFNTLES----AELRLSHLHFGYKSDETLIASRQEERQETSAELNQlLRTLDDQWKEKRDELNGE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 826 LEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE----HARHLFDIRHKLETEIKGRQDLEKNGARNNDELDKLRQTISdyES 901
Cdd:pfam12128 310 LSAADAAVAKDRSELEALEDQHGAFLDADIEtaaaDQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK--EQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 902 QINLLRRHNDELD----TTIKGH---QGKITHLENEL-HSRSGEIEKLNDLNQRLqkeKQDILNQKLKLDgDVQALKETI 973
Cdd:pfam12128 388 NNRDIAGIKDKLAkireARDRQLavaEDDLQALESELrEQLEAGKLEFNEEEYRL---KSRLGELKLRLN-QATATPELL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 974 RKLEN----------ELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKH--------STDVNKQLEQD 1035
Cdd:pfam12128 464 LQLENfderierareEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDElelqlfpqAGTLLHFLRKE 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1036 IRDLKErlaNIGKggRISRDSTTGTDGGAFGDRSSVADPSRTRGaagstvfvpAAEDIEsrgggEIDIPSSGDviHGRDG 1115
Cdd:pfam12128 544 APDWEQ---SIGK--VISPELLHRTDLDPEVWDGSVGGELNLYG---------VKLDLK-----RIDVPEWAA--SEEEL 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1116 RDGRDAGNRgthTITNTKERIERIEKnildryhddELVEhkIREVNDRWKRELER----LENEKDDLERRIRELEDELSQ 1191
Cdd:pfam12128 603 RERLDKAEE---ALQSAREKQAAAEE---------QLVQ--ANGELEKASREETFartaLKNARLDLRRLFDEKQSEKDK 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1192 IGRGNDKTENDITELKRKHAAEIDKLKSDISAL---HDKHLSDLDDEKEQYGKAVENLKSVEDDLRD------------K 1256
Cdd:pfam12128 669 KNKALAERKDSANERLNSLEAQLKQLDKKHQAWleeQKEQKREARTEKQAYWQVVEGALDAQLALLKaaiaarrsgakaE 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1257 LNNLEKQLADSL-------NRENELEREKRDYDEKINSLYGQNQKIKdEWDDFRNDA-DKEIQKWKTDAYTVRSEAKALE 1328
Cdd:pfam12128 749 LKALETWYKRDLaslgvdpDVIAKLKREIRTLERKIERIAVRRQEVL-RYFDWYQETwLQRRPRLATQLSNIERAISELQ 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1329 TTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTK--GNLVQKEMDLESTQNRLRSLEDQHSTLQS 1406
Cdd:pfam12128 828 QQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKedANSEQAQGSIGERLAQLEDLKLKRDYLSE 907
|
....
gi 1845979720 1407 DANK 1410
Cdd:pfam12128 908 SVKK 911
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1129-1260 |
1.54e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1129 ITNTKERIERIEKNILDRYHDDELVEHKIREVNDRWK------------RELERLENEKDDLERRIRELEDELSQIGRGN 1196
Cdd:COG1579 47 LEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvrnnkeyealqKEIESLKRRISDLEDEILELMERIEELEEEL 126
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1845979720 1197 DKTENDITELKRKHAAEIDKLKSDISALhDKHLSDLDDEKEQYGKAV-ENLKSVEDDLRDKLNNL 1260
Cdd:COG1579 127 AELEAELAELEAELEEKKAELDEELAEL-EAELEELEAEREELAAKIpPELLALYERIRKRKNGL 190
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1752-2089 |
1.55e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1752 EKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQM 1831
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1832 KSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1911
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1912 RQILTE-----KIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELN 1986
Cdd:COG4372 166 LAALEQelqalSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1987 GANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAK 2066
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELA 325
|
330 340
....*....|....*....|...
gi 1845979720 2067 NEKRVATKELEDLKRRLAQLENE 2089
Cdd:COG4372 326 KKLELALAILLAELADLLQLLLV 348
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1952-2091 |
1.57e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1952 SVENELRKTIDIQSKTSHEYQL------LKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQR 2025
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLehrlkeLPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 2026 QLQDANTEK--NRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKELEDLKRRLAQLENERR 2091
Cdd:COG1579 81 QLGNVRNNKeyEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1242-1573 |
1.70e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.98 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1242 AVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTdaytvr 1321
Cdd:COG1340 2 KTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKE------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1322 seakalettntaLKAQLQAANDRIDHLTKTVndhtskvrdltsqvrhleDELADTKGNLVQKEMDLESTQNRLRSLEDQH 1401
Cdd:COG1340 76 ------------LKEERDELNEKLNELREEL------------------DELRKELAELNKAGGSIDKLRKEIERLEWRQ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1402 STLQSDANKwrgeldaalrENDILKsnntnmetDLTRLKNRLKSAEDALkELKNSLSHAKTEKERLQNAFREKTKQADHL 1481
Cdd:COG1340 126 QTEVLSPEE----------EKELVE--------KIKELEKELEKAKKAL-EKNEKLKELRAELKELRKEAEEIHKKIKEL 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1482 NQLASQFDTKLTKLRNELQDTNDklitsdtERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDL-AHSHRVSEDSRL 1560
Cdd:COG1340 187 AEEAQELHEEMIELYKEADELRK-------EADELHKEIVEAQEKADELHEEIIELQKELRELRKELkKLRKKQRALKRE 259
|
330
....*....|...
gi 1845979720 1561 NALQELEARKYEI 1573
Cdd:COG1340 260 KEKEELEEKAEEI 272
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
878-1041 |
2.03e-03 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 43.30 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 878 LEKNGARNNDELDKLRQTISDYESQINLLrrhnDELDTTIKGHQGKITHlENELHSrsgeiEKLNDLNQRLQKEKQDI-- 955
Cdd:pfam09726 400 LEQDIKKLKAELQASRQTEQELRSQISSL----TSLERSLKSELGQLRQ-ENDLLQ-----TKLHNAVSAKQKDKQTVqq 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 956 LNQKLKLDGDVQALKEtirKLENElEKLRNENKELVGKEARARDAANQQ------LSRANLLNKELEDTKQDLKHSTDVN 1029
Cdd:pfam09726 470 LEKRLKAEQEARASAE---KQLAE-EKKRKKEEEATAARAVALAAASRGecteslKQRKRELESEIKKLTHDIKLKEEQI 545
|
170
....*....|....*
gi 1845979720 1030 KQLE---QDIRDLKE 1041
Cdd:pfam09726 546 RELEikvQELRKYKE 560
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1327-1549 |
2.03e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.46 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1327 LETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTkgnlvqkEMDLESTQNRLRSLEDQHSTLQS 1406
Cdd:PHA02562 197 IKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNL-------VMDIEDPSAALNKLNTAAAKIKS 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1407 DANKWRGELDAaLRENDILKsnnTNMETdltrlknrLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLAs 1486
Cdd:PHA02562 270 KIEQFQKVIKM-YEKGGVCP---TCTQQ--------ISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQS- 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1487 qfdTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLA 1549
Cdd:PHA02562 337 ---KKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKS 396
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1166-1573 |
2.16e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 43.30 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1166 RELERLENEKDDLERriRELEDELSQIGRGN---------DKTENDITELKRKHAAEIDKLKSDISALHDKHlsdlddek 1236
Cdd:pfam06160 10 KEIDELEERKNELMN--LPVQEELSKVKKLNltgetqekfEEWRKKWDDIVTKSLPDIEELLFEAEELNDKY-------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1237 eQYGKAvenlKSVEDDLRDKLNNLEKQLADSLNRENELeREKrdydEKINSLygQNQKIKDEWDDFRN----------DA 1306
Cdd:pfam06160 80 -RFKKA----KKALDEIEELLDDIEEDIKQILEELDEL-LES----EEKNRE--EVEELKDKYRELRKtllanrfsygPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1307 DKEIQKWKTDAYTVRSEAKALETTNTALKA--QLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKE 1384
Cdd:pfam06160 148 IDELEKQLAEIEEEFSQFEELTESGDYLEAreVLEKLEEETDALEELMEDIPPLYEELKTELPDQLEELKEGYREMEEEG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1385 MDLESTQ--NRLRSLEDQHSTLQSDANKwrGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKT 1462
Cdd:pfam06160 228 YALEHLNvdKEIQQLEEQLEENLALLEN--LELDEAEEALEEIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1463 EKERLQNAFREkTKQADHLN----QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKS 1538
Cdd:pfam06160 306 QNKELKEELER-VQQSYTLNenelERVRGLEKQLEELEKRYDEIVERLEEKEVAYSELQEELEEILEQL----EEIEEEQ 380
|
410 420 430
....*....|....*....|....*....|....*
gi 1845979720 1539 DEYQTTIDDLahshRVSEDSRLNALQELEARKYEI 1573
Cdd:pfam06160 381 EEFKESLQSL----RKDELEAREKLDEFKLELREI 411
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
535-804 |
2.18e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.59 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 535 ELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEmaQDSEKNvdgtvsiKRTRSLspgktplppSEALRAVRNTF 614
Cdd:COG1340 5 ELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAE--KRDELN-------AQVKEL---------REEAQELREKR 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 615 RNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKqfadAKREISNLQKSVDEAER----------NSRRTDDKL 684
Cdd:COG1340 67 DELNEKVKELKEERDELNEKLNELREELDELRKELAELNK----AGGSIDKLRKEIERLEWrqqtevlspeEEKELVEKI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 685 RASEAERVAAEKARKfLEDELAKLQASFQKSStDDARKLRDEMDEHTNSIQeEFKTRIDELNRRVENLLRENNRLKSEVN 764
Cdd:COG1340 143 KELEKELEKAKKALE-KNEKLKELRAELKELR-KEAEEIHKKIKELAEEAQ-ELHEEMIELYKEADELRKEADELHKEIV 219
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1845979720 765 PLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIRRNIQKD 804
Cdd:COG1340 220 EAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKRE 259
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
888-1049 |
2.32e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 888 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKlkldgDVQ 967
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNK-----EYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 968 ALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELEDTKQDLKhstDVNKQLEQDIRDLKERLANIG 1047
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD---EELAELEAELEELEAEREELA 169
|
..
gi 1845979720 1048 KG 1049
Cdd:COG1579 170 AK 171
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1171-1288 |
2.54e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.99 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1171 LENEKDDLERRIRELE----DELSQIGrGNDKTEN---DITELKRKhaaeIDKLKSDISALHDKhlsdlddEKEQYGKAV 1243
Cdd:PRK05771 14 LKSYKDEVLEALHELGvvhiEDLKEEL-SNERLRKlrsLLTKLSEA----LDKLRSYLPKLNPL-------REEKKKVSV 81
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1845979720 1244 ENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSL 1288
Cdd:PRK05771 82 KSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERL 126
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1165-1548 |
2.56e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.90 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1165 KRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHaaeiDKLKSDISA----------LHDKHLSDLDD 1234
Cdd:PRK04778 104 KHEINEIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLY----RELRKSLLAnrfsfgpaldELEKQLENLEE 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1235 EKEQYGKAVEN-----LKSVEDDLRDKLNNLEKQLADSLNRENELEREkrdYDEKINSL-YGQNQKIKDEWDDFRNDADK 1308
Cdd:PRK04778 180 EFSQFVELTESgdyveAREILDQLEEELAALEQIMEEIPELLKELQTE---LPDQLQELkAGYRELVEEGYHLDHLDIEK 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1309 EIQKWKTDAYTVRSEAKALETTNTalKAQLQAANDRIDHLTKTV-------NDHTSKVRDLTSQVRHLEDELADTKGNL- 1380
Cdd:PRK04778 257 EIQDLKEQIDENLALLEELDLDEA--EEKNEEIQERIDQLYDILerevkarKYVEKNSDTLPDFLEHAKEQNKELKEEId 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1381 -VQK-----EMDLESTqnrlRSLEDQHSTLQSDANkwrgELDAALRENDILKSnntnmetdltrlknrlkSAEDALKELK 1454
Cdd:PRK04778 335 rVKQsytlnESELESV----RQLEKQLESLEKQYD----EITERIAEQEIAYS-----------------ELQEELEEIL 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1455 NSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTN---------DKLITSDTERNALRNELqklsQ 1525
Cdd:PRK04778 390 KQLEEIEKEQEKLSEMLQGLRKDELEAREKLERYRNKLHEIKRYLEKSNlpglpedylEMFFEVSDEIEALAEEL----E 465
|
410 420
....*....|....*....|...
gi 1845979720 1526 ELKFGNEQIQRKSDEYQTTIDDL 1548
Cdd:PRK04778 466 EKPINMEAVNRLLEEATEDVETL 488
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1171-1313 |
2.64e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 42.31 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1171 LENEKDDLERRIRELEDELSQIgrgndktenditelkRKHAAEIDKLKSDISALHDKHLSDLDDEKEQyGKAVENLKSVE 1250
Cdd:smart00787 142 LEGLKEGLDENLEGLKEDYKLL---------------MKELELLNSIKPKLRDRKDALEEELRQLKQL-EDELEDCDPTE 205
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 1251 DD-LRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDAdKEIQKW 1313
Cdd:smart00787 206 LDrAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKL-EQCRGF 268
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1219-1396 |
2.68e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 2.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1219 SDISALHDkhLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKInslygqnqkikde 1298
Cdd:COG1579 4 EDLRALLD--LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI------------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1299 wddfrNDADKEIQKWKTDAYTVRS--EAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADT 1376
Cdd:COG1579 69 -----EEVEARIKKYEEQLGNVRNnkEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEK 143
|
170 180
....*....|....*....|
gi 1845979720 1377 KGNLVQKEMDLESTQNRLRS 1396
Cdd:COG1579 144 KAELDEELAELEAELEELEA 163
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
1151-1391 |
2.84e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.21 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1151 ELVEH--KIREVNDRWKRELERLENEKDDLERRIRELEDELSQIgrgndKTENDITELKRKhaaEIDKLKSDISALHDKH 1228
Cdd:COG1340 54 ELREEaqELREKRDELNEKVKELKEERDELNEKLNELREELDEL-----RKELAELNKAGG---SIDKLRKEIERLEWRQ 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1229 L-SDLDDEKEQygKAVENLKSVEDDL--RDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRND 1305
Cdd:COG1340 126 QtEVLSPEEEK--ELVEKIKELEKELekAKKALEKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1306 ADKeiqkwktdaytVRSEAKalettntALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEM 1385
Cdd:COG1340 204 ADE-----------LRKEAD-------ELHKEIVEAQEKADELHEEIIELQKELRELRKELKKLRKKQRALKREKEKEEL 265
|
....*.
gi 1845979720 1386 DLESTQ 1391
Cdd:COG1340 266 EEKAEE 271
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1233-1470 |
2.89e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1233 DDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQk 1312
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1313 wktDAYTVRSEAKALETTntaLKAQ-LQAANDRIDhLTKTVNDHTskvRDLTSQVRHLEDELADTKGNLVQKEMDLESTQ 1391
Cdd:COG3883 94 ---ALYRSGGSVSYLDVL---LGSEsFSDFLDRLS-ALSKIADAD---ADLLEELKADKAELEAKKAELEAKLAELEALK 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1392 NRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNA 1470
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1930-2227 |
2.89e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1930 DSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDY 2009
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEEL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2010 KQRVHDVNNRV-------------SELQRQLQDANTEKNRVEDRFLSVEKVVNTMRttetDLRQQLETAKNEKRVATKEL 2076
Cdd:PRK03918 272 KKEIEELEEKVkelkelkekaeeyIKLSEFYEEYLDELREIEKRLSRLEEEINGIE----ERIKELEEKEERLEELKKKL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2077 EDLKRRLAQLE-------------NERRNSSQLSDGWKKEKITllKKIELLENEKRRTDAAIREtalqreaIEKSLNAME 2143
Cdd:PRK03918 348 KELEKRLEELEerhelyeeakakkEELERLKKRLTGLTPEKLE--KELEELEKAKEEIEEEISK-------ITARIGELK 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2144 RENKELYKN-------------CAQLQQQIAQLE-MENGNRILELTNKQREEQERQLIRMRQEKGQIEKVIENRERTHRN 2209
Cdd:PRK03918 419 KEIKELKKAieelkkakgkcpvCGRELTEEHRKElLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL 498
|
330
....*....|....*...
gi 1845979720 2210 RikQLEDQIAILRDQLDG 2227
Cdd:PRK03918 499 K--ELAEQLKELEEKLKK 514
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1183-1487 |
2.93e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.12 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1183 RELEDELSQIGrgNDKTENDitelkrkhAAEIDKLKSDISALHDKHLSDldDEKEQYGKAVENLKSVEDDLRDKLNNLE- 1261
Cdd:PRK10929 26 KQITQELEQAK--AAKTPAQ--------AEIVEALQSALNWLEERKGSL--ERAKQYQQVIDNFPKLSAELRQQLNNERd 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1262 --KQLADSLNrENELEREKRdydeKINS-LYGQNQKIKDEWDDFRNDADK--EIQKWKTDAYTVRSEA----KALETTNT 1332
Cdd:PRK10929 94 epRSVPPNMS-TDALEQEIL----QVSSqLLEKSRQAQQEQDRAREISDSlsQLPQQQTEARRQLNEIerrlQTLGTPNT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1333 AL-KAQLQAandridhLTKTVNDHTSKVRDLtsqvrhledELADTKGNLVQK--EMDLESTQNRLRSLEDQHSTLQSDAN 1409
Cdd:PRK10929 169 PLaQAQLTA-------LQAESAALKALVDEL---------ELAQLSANNRQElaRLRSELAKKRSQQLDAYLQALRNQLN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1410 KWRG-ELDAALRENDILKSNNTNMETDLTRL--KNRlksaedalkELKNSLSHaktekerlqnafrektkQADHLNQLAS 1486
Cdd:PRK10929 233 SQRQrEAERALESTELLAEQSGDLPKSIVAQfkINR---------ELSQALNQ-----------------QAQRMDLIAS 286
|
.
gi 1845979720 1487 Q 1487
Cdd:PRK10929 287 Q 287
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1735-2040 |
2.97e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1735 FDIANLEGTLQSLLNKIEKLEMERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLL 1814
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1815 RSQEEALKQRDEERRQMKSKMVAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRES 1894
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAE 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1895 DSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKvqdmKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLL 1974
Cdd:COG4372 198 KEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLAL----SALLDALELEEDKEELLEEVILKEIEELELAILVEKDT 273
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1845979720 1975 KDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDR 2040
Cdd:COG4372 274 EEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAEL 339
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
530-919 |
3.04e-03 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 42.74 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 530 IERNIELESR-------GDDS---QRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRslspgKT 599
Cdd:pfam13166 71 VEENLSEQGEikpiftlGEESieiQEKIAKLKKEIKDHEEKLDAAEANLQKLDKEKEKLEADFLDECWKKIKR-----KK 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 600 PLPPSEALRAVRNTFRNKDNDIQQLERKLKIAESQVKEflnkfenaDEARRRLDKQFADAKREISNLQKSV---DEAERN 676
Cdd:pfam13166 146 NSALSEALNGFKYEANFKSRLLREIEKDNFNAGVLLSD--------EDRKAALATVFSDNKPEIAPLTFNVidfDALEKA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 677 SRRTDDKLRASEA-ERVAAE-KARKFLEDELAKLQAS-----FQKSSTDDARKLR------DEMDEHTNSIQEefktRID 743
Cdd:pfam13166 218 EILIQKVIGKSSAiEELIKNpDLADWVEQGLELHKAHldtcpFCGQPLPAERKAAleahfdDEFTEFQNRLQK----LIE 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 744 ELNRRVENLL----------RENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqirySDDIRRNIQkdLDDLREKYD 813
Cdd:pfam13166 294 KVESAISSLLaqlpavsdlaSLLSAFELDVEDIESEAEVLNSQLDGLRRALEAK------RKDPFKSIE--LDSVDAKIE 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 814 RVhTDNEKILGEL--EHAQKAAHLAEQQLKEIKIQRDDYQKQKDEHARHLFDIRHKLETEIKgrqDLEKNGARNNDELDK 891
Cdd:pfam13166 366 SI-NDLVASINELiaKHNEITDNFEEEKNKAKKKLRLHLVEEFKSEIDEYKDKYAGLEKAIN---SLEKEIKNLEAEIKK 441
|
410 420
....*....|....*....|....*...
gi 1845979720 892 LRQTISDYESQINLLRRHNDELDTTIKG 919
Cdd:pfam13166 442 LREEIKELEAQLRDHKPGADEINKLLKA 469
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1156-1602 |
3.07e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 3.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1156 KIREVNDRWKRELERLENEK--------------DDLERRIRELEDELSQIGRGND---KTENDITELKRKHAAEIDKLK 1218
Cdd:pfam01576 265 KIRELEAQISELQEDLESERaarnkaekqrrdlgEELEALKTELEDTLDTTAAQQElrsKREQEVTELKKALEEETRSHE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1219 SDISALHDKHLSDLDDEKEQygkaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIK-- 1296
Cdd:pfam01576 345 AQLQEMRQKHTQALEELTEQ----LEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQar 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1297 -DEWDDFRNDADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDE--- 1372
Cdd:pfam01576 421 lSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDErns 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1373 -------------------------LADTKGNLVQKEM--------------DLESTQNRLRSLEDQHSTLQSDANKWRG 1413
Cdd:pfam01576 501 lqeqleeeeeakrnverqlstlqaqLSDMKKKLEEDAGtlealeegkkrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQ 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1414 ELDAALRENDILKSNNTNMEtdltrlkNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKtkqadhlnqlasqfDTKLT 1493
Cdd:pfam01576 581 ELDDLLVDLDHQRQLVSNLE-------KKQKKFDQMLAEEKAISARYAEERDRAEAEAREK--------------ETRAL 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1494 KLRNELQDTNDKLITSDTERNALRNELQKL----------SQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNAL 1563
Cdd:pfam01576 640 SLARALEEALEAKEELERTNKQLRAEMEDLvsskddvgknVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLE 719
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 1845979720 1564 QELEARKYEIN-DLTSRLDSTEQRLATLQQDYIKADSERD 1602
Cdd:pfam01576 720 VNMQALKAQFErDLQARDEQGEEKRRQLVKQVRELEAELE 759
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
614-711 |
3.12e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 614 FRNKDNDIQQLERKLKIAESQVKeflNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraseaERVA 693
Cdd:PRK12704 77 LRERRNELQKLEKRLLQKEENLD---RKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL-----ERIS 148
|
90 100
....*....|....*....|....
gi 1845979720 694 ---AEKARKFLEDEL---AKLQAS 711
Cdd:PRK12704 149 gltAEEAKEILLEKVeeeARHEAA 172
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1306-1652 |
3.15e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1306 ADKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKtvndhtsKVRDLTSQVRHLEDELADTKGNLVQKEM 1385
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQA-------ELEALQAEIDKLQAEIAEAEAEIEERRE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1386 DLEstqNRLRSLEDQHSTLqsdankwrGELDAALrendilksNNTNMETDLTRLkNRLKSAEDALKELKNSLSHAKTEKE 1465
Cdd:COG3883 87 ELG---ERARALYRSGGSV--------SYLDVLL--------GSESFSDFLDRL-SALSKIADADADLLEELKADKAELE 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1466 RLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLitsDTERNALRNELQKLSQELkfgnEQIQRKSDEYQTTI 1545
Cdd:COG3883 147 AKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQL---SAEEAAAEAQLAELEAEL----AAAEAAAAAAAAAA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1546 DDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSANRVINFHTFV 1625
Cdd:COG3883 220 AAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAGGGAGGAGGGGGGGGAA 299
|
330 340
....*....|....*....|....*..
gi 1845979720 1626 DGGAGYVDGVPGGTSVIGGGPSAQRSG 1652
Cdd:COG3883 300 SGGSGGGSGGAGGVGSGGGAGAVVGGA 326
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1336-1578 |
3.32e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1336 AQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQSDANKWRGEL 1415
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1416 DAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAfREKTKQADHLNQLASQFDTKLTKL 1495
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQE-LQALSEAEAEQALDELLKEANRNA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1496 RNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEIND 1575
Cdd:COG4372 197 EKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEE 276
|
...
gi 1845979720 1576 LTS 1578
Cdd:COG4372 277 ELE 279
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
621-829 |
3.33e-03 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 41.55 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 621 IQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREISNLQKSVDEAERNSRRTDDKLraSEAERVA--AEKAR 698
Cdd:pfam00261 3 MQQIKEELDEAEERLKEAMKKLEEAEKRAEKAEAEVAALNRRIQLLEEELERTEERLAEALEKL--EEAEKAAdeSERGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 699 KFLEDELAKLQAS--FQKSSTDDARKLRDEMDEHTNSIQEEFKT------RIDELNRRVENLLRE-NNRLKSEVNPLK-- 767
Cdd:pfam00261 81 KVLENRALKDEEKmeILEAQLKEAKEIAEEADRKYEEVARKLVVvegdleRAEERAELAESKIVElEEELKVVGNNLKsl 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 768 ----DKYRDLENEYNSTQRRIEE--KETQIRYSDDIRR--NIQKDLDDLREKYDRVHTDNEKILGELEHA 829
Cdd:pfam00261 161 easeEKASEREDKYEEQIRFLTEklKEAETRAEFAERSvqKLEKEVDRLEDELEAEKEKYKAISEELDQT 230
|
|
| Rabaptin |
pfam03528 |
Rabaptin; |
1250-1614 |
3.44e-03 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 42.40 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1250 EDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDAYTVRSEAKALET 1329
Cdd:pfam03528 3 DEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1330 TNTALKAQLQAANDRI-----DHLTKTVNDHTSKVRDLTSQVRH-LEDELAdtKGNLVQKEMDLESTQNRLRSLEDQHS- 1402
Cdd:pfam03528 83 VATVSENTKQEAIDEVksqwqEEVASLQAIMKETVREYEVQFHRrLEQERA--QWNQYRESAEREIADLRRRLSEGQEEe 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1403 TLQSDANKwrgeldaALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNS----LSHA------------------ 1460
Cdd:pfam03528 161 NLEDEMKK-------AQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASkmkeLNHYleaekscrtdlemyvavl 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1461 KTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTNDKLITS------DTER--NALRNELQKLSQELKFGN- 1531
Cdd:pfam03528 234 NTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESqrllmrDMQRmeSVLTSEQLRQVEEIKKKDq 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1532 --EQIQRKSDEYQTTIDDLAHSHRVSEDSRLNALQElearKYEINDLTSRLDSTEQRLATLQQDYIKADS-----ERDIL 1604
Cdd:pfam03528 314 eeHKRARTHKEKETLKSDREHTVSIHAVFSPAGVET----SAPLSNVEEQINSAHGSVHSLDTDVVLGAGdsfnkQEDPF 389
|
410
....*....|
gi 1845979720 1605 SDALRRFQSS 1614
Cdd:pfam03528 390 KEGLRRAQST 399
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1836-2099 |
3.49e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1836 VAAELQARGKEAQLRHLNEQLKNLRTDLDNAHTDIRSLrdkEEQWDSSRFQLETKMRESDsdtnKYQLQIASFESERQIL 1915
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEEL---NEEYNELQAELEALQAEID----KLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1916 TEKIKEldgalRLSDSKVQDmkDDTDKLRRdLTKAESVENELRKTIDIQSKTSHEYQLLkDQLLNTQNELngaNNRKQQL 1995
Cdd:COG3883 85 REELGE-----RARALYRSG--GSVSYLDV-LLGSESFSDFLDRLSALSKIADADADLL-EELKADKAEL---EAKKAEL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1996 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKE 2075
Cdd:COG3883 153 EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAA 232
|
250 260
....*....|....*....|....
gi 1845979720 2076 LEDLKRRLAQLENERRNSSQLSDG 2099
Cdd:COG3883 233 AAAAAAAAAAAASAAGAGAAGAAG 256
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
324-822 |
3.93e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 324 NANYEMIARLDEERRRSDEYRMQWENERQKSLSLEDENDRLR-----------REFERYANDSKDKEKTFINRERNLAQY 392
Cdd:PRK01156 245 SSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIIndpvyknrnyiNDYFKYKNDIENKKQILSNIDAEINKY 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 393 lSDEQRKMLDL---WTELQRVRKQFSDLKtHTEEDLDKQKAEFTRAIRNVNNIsrnaafsagagdglglygledggdvNR 469
Cdd:PRK01156 325 -HAIIKKLSVLqkdYNDYIKKKSRYDDLN-NQILELEGYEMDYNSYLKSIESL-------------------------KK 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 470 TTNNYEKVFIETIKRMNGTGGAGSASSADLLEELRKIRGG----GSSEGDAELHKELMTKYEESIERNIE-LESRG---- 540
Cdd:PRK01156 378 KIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKlqdiSSKVSSLNQRIRALRENLDELSRNMEmLNGQSvcpv 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 541 -------DDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNVDGTVSIKRTRSLspgktplppsealravrnT 613
Cdd:PRK01156 458 cgttlgeEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSI------------------N 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 614 FRNKDNDIQQLERKLKIAESQVKEFLNKFENADEARRRLDKQFADAKREI---SNLQKSVDEAERNSRRTDDKlraseae 690
Cdd:PRK01156 520 EYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwlnALAVISLIDIETNRSRSNEI------- 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 691 rvaaEKARKFLEDELAKLQASFQ--KSSTDDA-RKLRDEMDEHTNSIQE--EFKTRIDELNRRVENLLRENNRLKSevnp 765
Cdd:PRK01156 593 ----KKQLNDLESRLQEIEIGFPddKSYIDKSiREIENEANNLNNKYNEiqENKILIEKLRGKIDNYKKQIAEIDS---- 664
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 766 lkdkyrdLENEYNSTQRRIEEKETQIRYSDDIRRNIQKDLDDLREKYDRVHTDNEKI 822
Cdd:PRK01156 665 -------IIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINEL 714
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1128-1616 |
4.14e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1128 TITNTKERIERIEKNILDRYHDDELVEHKIR------EVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTEn 1201
Cdd:TIGR00618 216 TYHERKQVLEKELKHLREALQQTQQSHAYLTqkreaqEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAP- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1202 diTELKRKHAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDlRDKLNNLEKQlADSLNRENELEREKRDY 1281
Cdd:TIGR00618 295 --LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQ-RRLLQTLHSQ-EIHIRDAHEVATSIREI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1282 DEKINSL---YGQNQKIKDEWDDFRNDADKEIQKWKTDAYTV---RSEAKALETTNTALKAQLQAANDRID----HLTKT 1351
Cdd:TIGR00618 371 SCQQHTLtqhIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtrTSAFRDLQGQLAHAKKQQELQQRYAElcaaAITCT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1352 VNDHTSKVRDLTSQVRHL--EDELADTKGNLVQKEMdlESTQNRLRSLEdQHSTLQSDANKWRGELDAALRENDILKSNN 1429
Cdd:TIGR00618 451 AQCEKLEKIHLQESAQSLkeREQQLQTKEQIHLQET--RKKAVVLARLL-ELQEEPCPLCGSCIHPNPARQDIDNPGPLT 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1430 TNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDtkltKLRNELQDTNDKLITS 1509
Cdd:TIGR00618 528 RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP----NLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1510 DTERNALRNELQKL---------SQELKFGNEQIQRKSDEYQTTIDDLA----------HSHRVSED------SRLNALQ 1564
Cdd:TIGR00618 604 SEAEDMLACEQHALlrklqpeqdLQDVRLHLQQCSQELALKLTALHALQltltqervreHALSIRVLpkellaSRQLALQ 683
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1845979720 1565 ELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSSAN 1616
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLA 735
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
657-856 |
4.19e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 657 ADAKREISNLQKSVDEAERNSRRTDDKLRASEAERVAAEKARKFLEDELAKLQAsfqksstdDARKLRDEMDEhtnsIQE 736
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQA--------EIDKLQAEIAE----AEA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 737 EFKTRIDELNRRVENLLRENNR-------LKSE-----------VNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIR 798
Cdd:COG3883 80 EIEERREELGERARALYRSGGSvsyldvlLGSEsfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAEL 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 799 RNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE 856
Cdd:COG3883 160 EALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| Spc7 |
smart00787 |
Spc7 kinetochore protein; This domain is found in cell division proteins which are required ... |
1226-1370 |
4.31e-03 |
|
Spc7 kinetochore protein; This domain is found in cell division proteins which are required for kinetochore-spindle association.
Pssm-ID: 197874 [Multi-domain] Cd Length: 312 Bit Score: 41.54 E-value: 4.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1226 DKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQladsLNRENELEREKRDYDEkiNSLYGQNQKIKDEwddfrnd 1305
Cdd:smart00787 150 DENLEGLKEDYKLLMKELELLNSIKPKLRDRKDALEEE----LRQLKQLEDELEDCDP--TELDRAKEKLKKL------- 216
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1306 aDKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVND---HT-SKVRDLTSQVRHLE 1370
Cdd:smart00787 217 -LQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNTEIAEAEKKLEQcrgFTfKEIEKLKEQLKLLQ 284
|
|
| DUF4686 |
pfam15742 |
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins ... |
1985-2225 |
4.53e-03 |
|
Domain of unknown function (DUF4686); This family of proteins is found in eukaryotes. Proteins in this family are typically between 498 and 775 amino acids in length. There is a conserved DLK sequence motif.
Pssm-ID: 464838 [Multi-domain] Cd Length: 384 Bit Score: 41.97 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1985 LNGANNRKQQLenellNVRSEVRDYKQRVHDVNNRVSELQRQLQDAntEKNRVEDRFLS----VEKVVNTMRTTETDLRQ 2060
Cdd:pfam15742 100 LKQAQSIKSQN-----SLQEKLAQEKSRVADAEEKILELQQKLEHA--HKVCLTDTCILekkqLEERIKEASENEAKLKQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2061 QLETAKNEKRVATKELEDLKRRLAQLEN-----ERRNSSQLSDGWKKEkiTLLKKielLENEKRRTDAAIRetaLQREAI 2135
Cdd:pfam15742 173 QYQEEQQKRKLLDQNVNELQQQVRSLQDkeaqlEMTNSQQQLRIQQQE--AQLKQ---LENEKRKSDEHLK---SNQELS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2136 EKsLNAMERENKELYKNCAQLQQQIAQlEMENGNrileltnkqrEEQERQLIRMRQEKGQIEKVIENRERthrnRIKQLE 2215
Cdd:pfam15742 245 EK-LSSLQQEKEALQEELQQVLKQLDV-HVRKYN----------EKHHHHKAKLRRAKDRLVHEVEQRDE----RIKQLE 308
|
250
....*....|
gi 1845979720 2216 DQIAILRDQL 2225
Cdd:pfam15742 309 NEIGILQQQS 318
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
875-1045 |
4.55e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 875 RQDLEKNGARNNDELDKLRQTISDYESQINLLRRHND--ELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEK 952
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 953 QDILNQ--KLKLDGDVQALKETIRKLENELEKLR-----------------NENKELVGKEA-RARDAANQQLSRANLLN 1012
Cdd:COG3206 250 GSGPDAlpELLQSPVIQQLRAQLAELEAELAELSarytpnhpdvialraqiAALRAQLQQEAqRILASLEAELEALQARE 329
|
170 180 190
....*....|....*....|....*....|...
gi 1845979720 1013 KELEDTKQDLKHSTDVNKQLEQDIRDLKERLAN 1045
Cdd:COG3206 330 ASLQAQLAQLEARLAELPELEAELRRLEREVEV 362
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1757-2085 |
4.62e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1757 ERNELRDTLARMKKKTTETHTTINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRD----------- 1825
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEkieryqedlee 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1826 -EERRQMKSKMVA-AELQARGKEAQLRHLNEQLKNLRTDL--------------------------------------DN 1865
Cdd:COG3096 359 lTERLEEQEEVVEeAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyqqavqalekaralcglpdltpEN 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1866 AHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNK----YQL--QIASfESERQILTEKIKELdgaLRLSDSKvQDMKDD 1939
Cdd:COG3096 439 AEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQfekaYELvcKIAG-EVERSQAWQTAREL---LRRYRSQ-QALAQR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1940 TDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNR 2019
Cdd:COG3096 514 LQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2020 VSELQ------RQLQDA-NTEKNRVEDRFLSVEKVVNTMRTTETDLRqQLETAKNEKRVATKELEDLKRRLAQ 2085
Cdd:COG3096 594 IKELAarapawLAAQDAlERLREQSGEALADSQEVTAAMQQLLERER-EATVERDELAARKQALESQIERLSQ 665
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1270-1594 |
4.62e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1270 RENELE--REKRD-----YDE------KINSLYGQ-NQKIKDEWDD-FRNDADKEIQKWKTDAYTVRSEAKALETTNTAL 1334
Cdd:COG3096 783 REKRLEelRAERDelaeqYAKasfdvqKLQRLHQAfSQFVGGHLAVaFAPDPEAELAALRQRRSELERELAQHRAQEQQL 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1335 KAQLQAANDRIDHLTKTV-NDHTSKVRDLTSQVRHLEDELADTKgnlvQKEMDLESTQNRLRSLEDQHSTLQSDAnkwrg 1413
Cdd:COG3096 863 RQQLDQLKEQLQLLNKLLpQANLLADETLADRLEELREELDAAQ----EAQAFIQQHGKALAQLEPLVAVLQSDP----- 933
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1414 eldaalRENDILKSNNTNMETDLTRLKNRLksaeDALKELKNSLSH--------AKTEKERLQNAFREKTKQADhlnQLA 1485
Cdd:COG3096 934 ------EQFEQLQADYLQAKEQQRRLKQQI----FALSEVVQRRPHfsyedavgLLGENSDLNEKLRARLEQAE---EAR 1000
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1486 SQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELkfgnEQIQRKSDeyqTTIDDLAHSHRvseDSRLNALQE 1565
Cdd:COG3096 1001 REAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQEL----EELGVQAD---AEAEERARIRR---DELHEELSQ 1070
|
330 340 350
....*....|....*....|....*....|...
gi 1845979720 1566 LEARKYEIN-DLTSR---LDSTEQRLATLQQDY 1594
Cdd:COG3096 1071 NRSRRSQLEkQLTRCeaeMDSLQKRLRKAERDY 1103
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1741-1956 |
4.65e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1741 EGTLQSLLNKIEKLEMERNELRDTLARMKKKttethttINQKETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEA 1820
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAE-------LEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1821 LKQ--RDEERRQMKSKMVAAELQARG----------KEAQLRHLNEQLKNLRTDLDNAHTDIRSLRDKEEQWDSSRFQLE 1888
Cdd:COG3883 88 LGEraRALYRSGGSVSYLDVLLGSESfsdfldrlsaLSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELE 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 1889 TKMRESDSDTNKYQLQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENE 1956
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1779-1923 |
4.69e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1779 INQKETRYRNIEDNLQDAEEERRALESRLQ---------SAKTLLRSQE--EALKQRDEERRQMKSKmvaAELQARGKEA 1847
Cdd:PRK04863 937 FEQLKQDYQQAQQTQRDAKQQAFALTEVVQrrahfsyedAAEMLAKNSDlnEKLRQRLEQAEQERTR---AREQLRQAQA 1013
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1848 QLRHLNEqlknLRTDLDNAHTDIRSLRDK----------------EEQWDSSRFQLETKMRESDSDTNKYQLQIASFESE 1911
Cdd:PRK04863 1014 QLAQYNQ----VLASLKSSYDAKRQMLQElkqelqdlgvpadsgaEERARARRDELHARLSANRSRRNQLEKQLTFCEAE 1089
|
170
....*....|..
gi 1845979720 1912 RQILTEKIKELD 1923
Cdd:PRK04863 1090 MDNLTKKLRKLE 1101
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1996-2362 |
4.85e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 4.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1996 ENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTEKNRVEDRflsvekvVNTMRTTETDLRQQLETAknEKRVATKE 2075
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-------LEALQAEIDKLQAEIAEA--EAEIEERR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2076 lEDLKRRLAQLENERRNSSQL-----SDGWKkekiTLLKKIELLENEKRRTDAAIRETALQREAIEKSLNAMErenkely 2150
Cdd:COG3883 86 -EELGERARALYRSGGSVSYLdvllgSESFS----DFLDRLSALSKIADADADLLEELKADKAELEAKKAELE------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2151 kncaqlqqqiaqlemengnrileltnKQREEQERQLIRMRQEKGQIEKVIENRErthrNRIKQLEDQIAILRDQLDGERR 2230
Cdd:COG3883 154 --------------------------AKLAELEALKAELEAAKAELEAQQAEQE----ALLAQLSAEEAAAEAQLAELEA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2231 RRREYVDRSMVNDIGRLGSNVLGIRNSYGDNSIDAIINGGSRSVGFYPRSTFASNPLTPPLGSSTPTHRPHVTDFRSAVD 2310
Cdd:COG3883 204 ELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAAAASAAG 283
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 2311 AG-SSYRRPISTIEDSGSVYGGSIRDRDSVYGGGGRDSSFGTRAGDSISRAGV 2362
Cdd:COG3883 284 GGaGGAGGGGGGGGAASGGSGGGSGGAGGVGSGGGAGAVVGGASAGGGGGSGG 336
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
681-979 |
5.10e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 681 DDKLRASEAERV--AAEKARKfLEDELAKLQASFQKSSTDDARKlrdemdehtnsiQEEFKTRIDELNRRVENLLrenNR 758
Cdd:PRK05771 34 EDLKEELSNERLrkLRSLLTK-LSEALDKLRSYLPKLNPLREEK------------KKVSVKSLEELIKDVEEEL---EK 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 759 LKSEVNPLKDKYRDLENEynstQRRIEEKETQIRYsddiRRNIQKDLDDLREkYDRVHTdnekILGELEHAQKAAHLAEQ 838
Cdd:PRK05771 98 IEKEIKELEEEISELENE----IKELEQEIERLEP----WGNFDLDLSLLLG-FKYVSV----FVGTVPEDKLEELKLES 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 839 QLKEIKIQRDDYQKqkdehaRHLFDIRHKlETEIKGRQDLEKNGARNND--ELDKLRQTISDYESQINLLRRHNDELDTT 916
Cdd:PRK05771 165 DVENVEYISTDKGY------VYVVVVVLK-ELSDEVEEELKKLGFERLEleEEGTPSELIREIKEELEEIEKERESLLEE 237
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1845979720 917 IKghqGKITHLENELHSRSGEIEklndlnqrLQKEKQDILNQKLK------LDG-----DVQALKETIRKLENE 979
Cdd:PRK05771 238 LK---ELAKKYLEELLALYEYLE--------IELERAEALSKFLKtdktfaIEGwvpedRVKKLKELIDKATGG 300
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
721-1049 |
5.28e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.13 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 721 RKLRDEMDeHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLeneynstQRRIEEKETQirYSDDIRrN 800
Cdd:PRK04778 101 RKAKHEIN-EIESLLDLIEEDIEQILEELQELLESEEKNREEVEQLKDLYREL-------RKSLLANRFS--FGPALD-E 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 801 IQKDLDDLREKYDRVHTDNEKilGELEHAQKAAHLAEQQLKEIKIQRDD----YQKQKDEHARHLFDIRHkleteikGRQ 876
Cdd:PRK04778 170 LEKQLENLEEEFSQFVELTES--GDYVEAREILDQLEEELAALEQIMEEipelLKELQTELPDQLQELKA-------GYR 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 877 DLEKNGARnndeLDKLrqtisDYESQINLLRRHNDELDTTIKghQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDIL 956
Cdd:PRK04778 241 ELVEEGYH----LDHL-----DIEKEIQDLKEQIDENLALLE--ELDLDEAEEKNEEIQERIDQLYDILEREVKARKYVE 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 957 NQKLKLDGDVQALKETIRKLENELEKLrNENKELVGKEARARDAANQQLSRanlLNKELEDTKQDLKHSTDVNKQLEQDI 1036
Cdd:PRK04778 310 KNSDTLPDFLEHAKEQNKELKEEIDRV-KQSYTLNESELESVRQLEKQLES---LEKQYDEITERIAEQEIAYSELQEEL 385
|
330
....*....|...
gi 1845979720 1037 RDLKERLANIGKG 1049
Cdd:PRK04778 386 EEILKQLEEIEKE 398
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1903-2033 |
5.37e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1903 LQIASFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDI------QSKTSHEYQLLkd 1976
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKyeeqlgNVRNNKEYEAL-- 94
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1977 qllntQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDVNNRVSELQRQLQDANTE 2033
Cdd:COG1579 95 -----QKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1422-1528 |
5.51e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.64 E-value: 5.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1422 NDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAF-REKTKQADHLNQLASQFDTKLTKLRNELQ 1500
Cdd:TIGR04320 242 NKFDKTPIPNPPNSLAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYaAAQAALATAQKELANAQAQALQTAQNNLA 321
|
90 100
....*....|....*....|....*...
gi 1845979720 1501 DTNDKLITSDTERNALRNELQKLSQELK 1528
Cdd:TIGR04320 322 TAQAALANAEARLAKAKEALANLNADLA 349
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
716-835 |
5.73e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.77 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 716 STDDARKLRDEMDEHTNSIQEEFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKetqIRYSD 795
Cdd:COG2433 389 ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERRE---IRKDR 465
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1845979720 796 DIRRnIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHL 835
Cdd:COG2433 466 EISR-LDREIERLERELEEERERIEELKRKLERLKELWKL 504
|
|
| HemX |
COG2959 |
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis ... |
888-985 |
5.76e-03 |
|
Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis) [General function prediction only];
Pssm-ID: 442199 [Multi-domain] Cd Length: 361 Bit Score: 41.49 E-value: 5.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 888 ELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQD------------I 955
Cdd:COG2959 61 ELAQLAQQLAALQQQAQELRALAQQLQELLQQLAARLAQLEQRLAELQQQLAALQQLLQSLSGSSRDdwllaeaeyllrL 140
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1845979720 956 LNQKLKLDGDVQ----ALKE--------------TIRK-LENELEKLRN 985
Cdd:COG2959 141 AGQQLQLEGDVKtalaALQSadarlarlndpsllPVRRaIARDIARLRA 189
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1161-1605 |
5.82e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1161 NDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEiDKLKSDISALHDKHLSDLDDEKEQyg 1240
Cdd:pfam01576 147 NSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKE-EKGRQELEKAKRKLEGESTDLQEQ-- 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1241 kaVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQKIKDEWDD---FRNDADKEIQKWKTDA 1317
Cdd:pfam01576 224 --IAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESeraARNKAEKQRRDLGEEL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1318 YTVRSEakaLETT--NTALKAQLQAANDR-IDHLTKTVND----HTSKVRDL----TSQVRHLEDELADTKGNLVqkemd 1386
Cdd:pfam01576 302 EALKTE---LEDTldTTAAQQELRSKREQeVTELKKALEEetrsHEAQLQEMrqkhTQALEELTEQLEQAKRNKA----- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1387 lestqnrlrSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNSLSHAKTEKER 1466
Cdd:pfam01576 374 ---------NLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELES 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1467 LQNAFREKTKQADHLNQLASQFDTKLTKLRNELQ-DTNDKLITS------DTERNALRNEL-------QKLSQELKFGNE 1532
Cdd:pfam01576 445 VSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQeETRQKLNLStrlrqlEDERNSLQEQLeeeeeakRNVERQLSTLQA 524
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 1533 QIQrksdEYQTTIDDLAHSHRVSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDY----IKADSERDILS 1605
Cdd:pfam01576 525 QLS----DMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELddllVDLDHQRQLVS 597
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1170-1280 |
6.28e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.99 E-value: 6.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1170 RLEN-----EKDDLERRIRELEDELSQIGRgndktENDITELKRKHA--AEIDKLKSDISALHDKHLSdlddEKEQYGKa 1242
Cdd:COG0542 403 RMEIdskpeELDELERRLEQLEIEKEALKK-----EQDEASFERLAElrDELAELEEELEALKARWEA----EKELIEE- 472
|
90 100 110
....*....|....*....|....*....|....*...
gi 1845979720 1243 VENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRD 1280
Cdd:COG0542 473 IQELKEELEQRYGKIPELEKELAELEEELAELAPLLRE 510
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
927-1351 |
6.33e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 927 LENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKL----DGDVQALKETIRKLENELEKLRNENKELVGKEARARDAAN 1002
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEaeekEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1003 -----QQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKERLANIGKGGRISRDSTTGTDGGAFGD---------- 1067
Cdd:COG4717 127 llplyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDlaeeleelqq 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1068 ---------RSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDIPSSGDVIHGRDGRDGRDAGNRGTHT---------I 1129
Cdd:COG4717 207 rlaeleeelEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlglL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1130 TNTKERIERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRK 1209
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1210 -HAAEIDKLKSDISALHDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADS-----LNRENELEREKRDYDE 1283
Cdd:COG4717 367 eLEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeeelEEELEELEEELEELEE 446
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 1284 KINSLYGQNQKIKDEWDDFRNdaDKEIQKWKTDAYTVRSEAKALETTNTALKAQLQAANDRIDHLTKT 1351
Cdd:COG4717 447 ELEELREELAELEAELEQLEE--DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1149-1833 |
6.57e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1149 DDELVEHKIREVN--DRWKRELERLENEKDDLERRIRELEDELSQigrgndktENDITELKRKHAAEIDKLKSDISALHD 1226
Cdd:PRK03918 143 SDESREKVVRQILglDDYENAYKNLGEVIKEIKRRIERLEKFIKR--------TENIEELIKEKEKELEEVLREINEISS 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1227 KhLSDLDDEKEQYGKAVENLKSveddLRDKLNNLEKQLAdslnrenELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDA 1306
Cdd:PRK03918 215 E-LPELREELEKLEKEVKELEE----LKEEIEELEKELE-------SLEGSKRKLEEKIRELEERIEELKKEIEELEEKV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1307 dKEIQ--KWKTDAYT--------VRSEAKALETTNTALKAQLQAANDRIDHLtktvNDHTSKVRDLTSQVRHLEDELADT 1376
Cdd:PRK03918 283 -KELKelKEKAEEYIklsefyeeYLDELREIEKRLSRLEEEINGIEERIKEL----EEKEERLEELKKKLKELEKRLEEL 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1377 KGNlVQKEMDLESTQNRLRSLEDQHSTLQSDanKWRGELDAALRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKNS 1456
Cdd:PRK03918 358 EER-HELYEEAKAKKEELERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKA 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1457 -----LSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTnDKLITSDTERNALR---NELQKLSQELK 1528
Cdd:PRK03918 435 kgkcpVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKelaEQLKELEEKLK 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1529 -FGNEQIQRKSDEYQTTIDDLA--HSHRVSEDSRLNALQELEARKYEINdltSRLDSTEQRLATLQQDYIKAD-SERDIL 1604
Cdd:PRK03918 514 kYNLEELEKKAEEYEKLKEKLIklKGEIKSLKKELEKLEELKKKLAELE---KKLDELEEELAELLKELEELGfESVEEL 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1605 SDALRRFQSSANRVInfhtfvdggagyvdgvpggtsvigggpsaqrsgaydpssggvigsgisggpggsdfgreieigrg 1684
Cdd:PRK03918 591 EERLKELEPFYNEYL----------------------------------------------------------------- 605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1685 dsdqsdvayprsvpfppsadfssgrpgaasaggrvinnldgtttvnmnggfDIANLEGTLQSLLNKIEKLEMERNELRDT 1764
Cdd:PRK03918 606 ---------------------------------------------------ELKDAEKELEREEKELKKLEEELDKAFEE 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1765 LARMKKKTTETHTTINQ------------KETRYRNIEDNLQDAEEERRALESRLQSAKTLLRSQEEALKQRDEERRQMK 1832
Cdd:PRK03918 635 LAETEKRLEELRKELEElekkyseeeyeeLREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
.
gi 1845979720 1833 S 1833
Cdd:PRK03918 715 K 715
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1425-1614 |
6.99e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.54 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1425 LKSNNTNMETDLTRLKNRLKSAEDALKELKNSlshAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELQDTND 1504
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKK---NGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSA 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1505 KLITSDTERNALRNELQKLSQELKFGNE-------------------QIQRKSDEYQTTIDDLahshrvsedsrLNALQE 1565
Cdd:PHA02562 256 ALNKLNTAAAKIKSKIEQFQKVIKMYEKggvcptctqqisegpdritKIKDKLKELQHSLEKL-----------DTAIDE 324
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1845979720 1566 LEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDILSDALRRFQSS 1614
Cdd:PHA02562 325 LEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAE 373
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
714-1604 |
7.20e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 41.74 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 714 KSSTDDARKLRDEmDEHTNSIQEEFKTRIDELNRRVENLlRENNRLKSEVNPLKDKYRDLENE--YNSTQRRIEEKETQI 791
Cdd:PTZ00440 546 KYYLQSIETLIKD-EKLKRSMKNDIKNKIKYIEENVDHI-KDIISLNDEIDNIIQQIEELINEalFNKEKFINEKNDLQE 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 792 RYSDDIRRNIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLaeqqLKEIKiqrDDYQKQKDEHARHLFDIRHKLETE 871
Cdd:PTZ00440 624 KVKYILNKFYKGDLQELLDELSHFLDDHKYLYHEAKSKEDLQTL----LNTSK---NEYEKLEFMKSDNIDNIIKNLKKE 696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 872 IKGRQDLEKNGArnNDELDKLRQTISDyesQINLLRRHNDELDTTIKGHQGKITHLEN--------------ELHSRSGE 937
Cdd:PTZ00440 697 LQNLLSLKENII--KKQLNNIEQDISN---SLNQYTIKYNDLKSSIEEYKEEEEKLEVykhqiinrknefilHLYENDKD 771
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 938 IEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKELVGKEARARDAANQQLSRANLLNKELeD 1017
Cdd:PTZ00440 772 LPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQKFPTEDENL-N 850
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1018 TKQDLKHSTDVNKQLEQDIRDLKERLANIGkggriSRDSTTGTDGGAFGDRSSVADPSRTRGaagstvfvpaaeDIESRG 1097
Cdd:PTZ00440 851 LKELEKEFNENNQIVDNIIKDIENMNKNIN-----IIKTLNIAINRSNSNKQLVEHLLNNKI------------DLKNKL 913
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1098 GGEIDIPSSGDVIhgrdgrdgrdAGNRGTHTITNTKERIERIEKNILDRYHDD---------ELVEHKIREVNDRWKREL 1168
Cdd:PTZ00440 914 EQHMKIINTDNII----------QKNEKLNLLNNLNKEKEKIEKQLSDTKINNlkmqiektlEYYDKSKENINGNDGTHL 983
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1169 ERLENEKDDLERRIRELEDELSQIGRGNDKTENDITELKRKHAAEIDKL----KSDISALHDKHLSDLDDEKEQYGK--A 1242
Cdd:PTZ00440 984 EKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQHDDIIELIDKLikekGKEIEEKVDQYISLLEKMKTKLSSfhF 1063
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1243 VENLKSVEDDL-RDKLNNLEKQLADSLNR----ENELEREKRDYDEKINSLYGQNQKIKDEWDDFRNDADKEIQKWKTDA 1317
Cdd:PTZ00440 1064 NIDIKKYKNPKiKEEIKLLEEKVEALLKKidenKNKLIEIKNKSHEHVVNADKEKNKQTEHYNKKKKSLEKIYKQMEKTL 1143
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1318 YTVRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGNLVQKEMDLEST------Q 1391
Cdd:PTZ00440 1144 KELENMNLEDITLNEVNEIEIEYERILIDHIVEQINNEAKKSKTIMEEIESYKKDIDQVKKNMSKERNDHLTTfeynayY 1223
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1392 NRLRSLEDQHSTLQSDANKWRGELDAAlRENDILKSNNTNMETDLTRLKNRLKSAEDALKELKN------SLSHAKTEKE 1465
Cdd:PTZ00440 1224 DKATASYENIEELTTEAKGLKGEANRS-TNVDELKEIKLQVFSYLQQVIKENNKMENALHEIKNmyefliSIDSEKILKE 1302
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1466 RLQNAFR------EKTKQADHLNQLASQFDTKLTKLRNE----LQDTNDKLItsDTERNALRNELQKLSQELKFGNEQIQ 1535
Cdd:PTZ00440 1303 ILNSTKKaeefsnDAKKELEKTDNLIKQVEAKIEQAKEHknkiYGSLEDKQI--DDEIKKIEQIKEEISNKRKEINKYLS 1380
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1536 RKSDEYQTTIDDLAHSHR----VSEDSRLNALQELEARKYEINDLTSRLDSTEQRLATLQQDYIKADSERDIL 1604
Cdd:PTZ00440 1381 NIKSNKEKCDLHVRNASRgkdkIDFLNKHEAIEPSNSKEVNIIKITDNINKCKQYSNEAMETENKADENNDSI 1453
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
801-1103 |
7.49e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 7.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 801 IQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDEharhlfdIRHKLETEIKGRQDLEK 880
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEE-------LNEQLQAAQAELAQAQE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 881 NGARNNDELDKLRQTISDYESQINLLRRHNDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKL 960
Cdd:COG4372 102 ELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 961 KLDGDvQALKETIRKLENELEKLRNENKELvgKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLK 1040
Cdd:COG4372 182 EQALD-ELLKEANRNAEKEEELAEAEKLIE--SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILK 258
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1845979720 1041 ERLANIGKGGRISRDSTTGTDGGAFGDRSSVADPSRTRGAAGSTVFVPAAEDIESRGGGEIDI 1103
Cdd:COG4372 259 EIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAAL 321
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1433-1608 |
7.76e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 7.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1433 ETDLTRLKNRLKSAEDALKELKNSLSHAKTEKERLQNAFREKTKQADHLNQLASQFDTKLTKLRNELqdtndKLITSDTE 1512
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQL-----GNVRNNKE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1513 RNALRNELQKLSQELKFGNEQIQR---KSDEYQTTIDDLAhshrvsedsrlnalQELEARKYEINDLTSRLDsteQRLAT 1589
Cdd:COG1579 91 YEALQKEIESLKRRISDLEDEILElmeRIEELEEELAELE--------------AELAELEAELEEKKAELD---EELAE 153
|
170
....*....|....*....
gi 1845979720 1590 LQQDYIKADSERDILSDAL 1608
Cdd:COG1579 154 LEAELEELEAEREELAAKI 172
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
324-434 |
8.03e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 8.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 324 NANYEMIARLDEERRRSDEYRMQWENERQKSLSL--EDENDRLRREFERYANDSKDKEKTFINReRNLAQYLSDEQRKML 401
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQVERlrQQEEERKRKKLELEKEKRDRKRAEEQRR-KILEKELEERKQAMI 509
|
90 100 110
....*....|....*....|....*....|...
gi 1845979720 402 DLWTELQRVRKQFSDLKTHTEEDLDKQKAEFTR 434
Cdd:pfam17380 510 EEERKRKLLEKEMEERQKAIYEEERRREAEEER 542
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
719-856 |
9.38e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 9.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 719 DARKLRDEMDEHTNSIQEEFKTRIDELNRRVEnllrennrLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRYSDDIR 798
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVE--------MARELEELSARESDLEQDYQAASDHLNLVQTALRQQEKIE 350
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1845979720 799 RnIQKDLDDLREKYDRVHTDNEKILGELEHAQKAAHLAEQQLKEIKIQRDDYQKQKDE 856
Cdd:COG3096 351 R-YQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDV 407
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
1142-1327 |
9.57e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.21 E-value: 9.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1142 NILDRY-HDDELVEhKIREVNDRW---KRELERLENEKDDLERRIRELEDELSQIGRGNDKtENDITELKRKHA--AEID 1215
Cdd:COG0497 145 ELLDAFaGLEELLE-EYREAYRAWralKKELEELRADEAERARELDLLRFQLEELEAAALQ-PGEEEELEEERRrlSNAE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1216 KLKSDISALHD-----------------KHLSDLDDEKEQYGKAVENLKS-------VEDDLRDKLNNLE---KQLADSL 1268
Cdd:COG0497 223 KLREALQEALEalsggeggaldllgqalRALERLAEYDPSLAELAERLESalieleeAASELRRYLDSLEfdpERLEEVE 302
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1845979720 1269 NRENELEREKRDYDEKINSLYGQNQKIKDEWDDFrNDADKEIQKWKTDAYTVRSEAKAL 1327
Cdd:COG0497 303 ERLALLRRLARKYGVTVEELLAYAEELRAELAEL-ENSDERLEELEAELAEAEAELLEA 360
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1941-2153 |
9.83e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 9.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 1941 DKLRRDLTKaesVENELRKTIDIQskTSHEYQLLKDQ--LLNTQNELNGANN-RKQQLENELLNvrsEVRDYKQRVHDVN 2017
Cdd:PHA02562 169 DKLNKDKIR---ELNQQIQTLDMK--IDHIQQQIKTYnkNIEEQRKKNGENIaRKQNKYDELVE---EAKTIKAEIEELT 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1845979720 2018 NRVSELQRQ-------LQDANTEKNRVEDRFLSVEKVVNTMRTTET--DLRQQLETA-------KNEKRVATKELEDLKR 2081
Cdd:PHA02562 241 DELLNLVMDiedpsaaLNKLNTAAAKIKSKIEQFQKVIKMYEKGGVcpTCTQQISEGpdritkiKDKLKELQHSLEKLDT 320
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1845979720 2082 R---LAQLENE-RRNSSQLSDgwKKEKITLLKK-IELLENEKRRTDAAIRETALQREAIEKSLNAMERENKELYKNC 2153
Cdd:PHA02562 321 AideLEEIMDEfNEQSKKLLE--LKNKISTNKQsLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTK 395
|
|
| |
