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Conserved domains on  [gi|257467527|ref|NP_112471|]
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organic anion transporter 3 isoform 1 [Mus musculus]

Protein Classification

MFS transporter( domain architecture ID 11489935)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
11-503 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 588.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   11 GSMGPFQYLHVTLLALPILGIANHNLLQIFTATTPDHHCRPPPNASLE-----PWVLPLGPNGKPEKCLRFVHLP----- 80
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSsrcelNLTLPRLPDGRPESCLRFMVDQwanps 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   81 -NASLPNDTQG----ATEPCLDGWIYN--STRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPIL 153
Cdd:TIGR00898  81 lLGCEPLKLSDlglaATEPCLDGWEYSydTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  154 TWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVP 233
Cdd:TIGR00898 161 LLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  234 QWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRVATFNGKkeegeKLTVEELKFNLQKDITSAKVKYG 313
Cdd:TIGR00898 241 DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGK-----KLPAEVLSLSLEKDLSSSKKQYS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  314 LSDLFRVSILRRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILA 393
Cdd:TIGR00898 316 FLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLA 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  394 GVAILALIFVSSEMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFI 473
Cdd:TIGR00898 396 GVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFL 475
                         490       500       510
                  ....*....|....*....|....*....|
gi 257467527  474 PNVIFGTMTLLGGSAAFFLLETLNRPLPET 503
Cdd:TIGR00898 476 PLVLFGGLALLAGILTLFLPETKGVPLPET 505
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
11-503 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 588.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   11 GSMGPFQYLHVTLLALPILGIANHNLLQIFTATTPDHHCRPPPNASLE-----PWVLPLGPNGKPEKCLRFVHLP----- 80
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSsrcelNLTLPRLPDGRPESCLRFMVDQwanps 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   81 -NASLPNDTQG----ATEPCLDGWIYN--STRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPIL 153
Cdd:TIGR00898  81 lLGCEPLKLSDlglaATEPCLDGWEYSydTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  154 TWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVP 233
Cdd:TIGR00898 161 LLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  234 QWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRVATFNGKkeegeKLTVEELKFNLQKDITSAKVKYG 313
Cdd:TIGR00898 241 DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGK-----KLPAEVLSLSLEKDLSSSKKQYS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  314 LSDLFRVSILRRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILA 393
Cdd:TIGR00898 316 FLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLA 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  394 GVAILALIFVSSEMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFI 473
Cdd:TIGR00898 396 GVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFL 475
                         490       500       510
                  ....*....|....*....|....*....|
gi 257467527  474 PNVIFGTMTLLGGSAAFFLLETLNRPLPET 503
Cdd:TIGR00898 476 PLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
90-492 4.93e-172

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 489.24  E-value: 4.93e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  90 GATEPCLDGWIYN--STRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSA 167
Cdd:cd17446    1 LATEPCTDGWVYDksEFPSTIITEWDLVCNHRALRQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 168 AFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFF 247
Cdd:cd17446   81 AFSPSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRDWRWLQLAVSLPFF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 248 IFSLLSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVT 327
Cdd:cd17446  161 IFFLYSWWFP-------------------------------------------------------------------RIT 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 328 FCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEM 407
Cdd:cd17446  174 FCLSLVWFSTSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQDL 253
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 408 QLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGS 487
Cdd:cd17446  254 QTVRTALAVFGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKMLGEYYPFLPLIIYGAAPILSGI 333

                 ....*
gi 257467527 488 AAFFL 492
Cdd:cd17446  334 AACFL 338
Sugar_tr pfam00083
Sugar (and other) transporter;
127-502 1.20e-24

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 106.59  E-value: 1.20e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  127 SVFMAGILVGGPVFGELSDRFGRKPILTWS---YLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:pfam00083  53 SIFSVGCFIGSLFAGKLGDRFGRKKSLLIAnvlFVIGAVLQGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAP 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  204 TSTRAISSTTIGYCYTIGQFILPGLAYAV------PQWRWLqLSVSAAFFIF-SLLSWWVPESIRWLVLSGKFSKALKTL 276
Cdd:pfam00083 133 KKLRGALGSLYQLAITFGILLAYIFGLGLnktsnsDGWRIP-LGLQLVPALLlIIGLLFLPESPRWLVEKGRLEEAREVL 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  277 QRvatfnGKKEEGEKLTVEELKFNLQKDITSAKVKYGLsdLFRVSILRRVTFCLSLAWFATGFAYYSLAMGveeFGVNIY 356
Cdd:pfam00083 212 AK-----LRGVPDVDRELDEIKDSLEAGQEAEKASWKE--LFSTKTRRQRLLIGVMLQIFQQLTGINAIFY---YSTTIF 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  357 ---------ILQIIFGGVDIPAKFITILSISYLGRRitQGFLLILAGVAIlALIFVSSEMQLLRTALAVFGKGCLSGSF- 426
Cdd:pfam00083 282 enlglsdsfLVTIIVGVVNFVFTFIAIFLVDRFGRR--PLLLLGAAGMAI-CFVILGIVALLGVSKSDWAGIVAIVFIAl 358
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  427 ----------SCLFLYTSELYPTVLRQTGMGIS----NIWARVGSMIAPlvKITGELQPF-IPNVIFGTMTLLGGSAAFF 491
Cdd:pfam00083 359 fiaffamgwgPVPWVIVSELFPLSVRSKAMALAtaanWLANFLIGFLFP--IITDAIGLGyTFFIFAGLLVLFIIFVFFF 436
                         410
                  ....*....|.
gi 257467527  492 LLETLNRPLPE 502
Cdd:pfam00083 437 VPETKGRTLEE 447
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
96-457 6.88e-17

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 81.94  E-value: 6.88e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  96 LDGWIYNSTRDTIVTEWDLvcgSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTV 175
Cdd:COG2814   24 LGIGIVLPALPLIAADLGA---SPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWL 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 176 YMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLL 252
Cdd:COG2814  101 LLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADlfgWRWVFLVNAVLALLALLL 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 253 SWW-VPESIRwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkdITSAKVKYGLSDLFRVSILRRVTFCLS 331
Cdd:COG2814  181 LLRlLPESRP-------------------------------------------AARARLRGSLRELLRRPRLLLLLLLAF 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 332 LAWFA-TGFAYYSLAMGVEEFGVN---IYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEM 407
Cdd:COG2814  218 LLGFGfFALFTYLPLYLQEVLGLSasaAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLW 297
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 257467527 408 QLLrTALAVFGkGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGS 457
Cdd:COG2814  298 LLL-LALFLLG-FGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
xylE PRK10077
D-xylose transporter XylE; Provisional
235-517 3.37e-05

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 46.61  E-value: 3.37e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 235 WRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRVatfNGKKEEGEKLtvEELKFNLQKDITSAK--VKY 312
Cdd:PRK10077 193 WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKI---MGNTLATQAL--QEIKHSLDHGRKTGGklLMF 267
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 313 GLSDLFrVSILrrvtfcLSLAWFATGF---AYYSL----AMGVEefGVNIYILQIIFGGVDIPAKFITILSISYLGRRIt 385
Cdd:PRK10077 268 GVGVIV-IGVM------LSVFQQFVGInvvLYYAPeifkTLGAS--TDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP- 337
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 386 qgfLLILAGVAILALIFVssemqlLRTALAVFGKGclSGSFSCLFLYT---------------SELYPTVLRQTGMGISN 450
Cdd:PRK10077 338 ---LQIIGALGMAIGMFS------LGTAFYTQAPG--IVALLSMLFYVaafamswgpvcwvllSEIFPNAIRGKALAIAV 406
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 451 I--WAR---VGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFLLetlnRPLPE----TIEDIQD-WYQQTKKT 517
Cdd:PRK10077 407 AaqWIAnyfVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW----KFVPEtkgkTLEEMEAlWEPETKKT 479
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
11-503 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 588.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   11 GSMGPFQYLHVTLLALPILGIANHNLLQIFTATTPDHHCRPPPNASLE-----PWVLPLGPNGKPEKCLRFVHLP----- 80
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSsrcelNLTLPRLPDGRPESCLRFMVDQwanps 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527   81 -NASLPNDTQG----ATEPCLDGWIYN--STRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPIL 153
Cdd:TIGR00898  81 lLGCEPLKLSDlglaATEPCLDGWEYSydTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  154 TWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVP 233
Cdd:TIGR00898 161 LLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  234 QWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRVATFNGKkeegeKLTVEELKFNLQKDITSAKVKYG 313
Cdd:TIGR00898 241 DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGK-----KLPAEVLSLSLEKDLSSSKKQYS 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  314 LSDLFRVSILRRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILA 393
Cdd:TIGR00898 316 FLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLA 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  394 GVAILALIFVSSEMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFI 473
Cdd:TIGR00898 396 GVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFL 475
                         490       500       510
                  ....*....|....*....|....*....|
gi 257467527  474 PNVIFGTMTLLGGSAAFFLLETLNRPLPET 503
Cdd:TIGR00898 476 PLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
90-492 4.93e-172

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 489.24  E-value: 4.93e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  90 GATEPCLDGWIYN--STRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSA 167
Cdd:cd17446    1 LATEPCTDGWVYDksEFPSTIITEWDLVCNHRALRQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 168 AFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFF 247
Cdd:cd17446   81 AFSPSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRDWRWLQLAVSLPFF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 248 IFSLLSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVT 327
Cdd:cd17446  161 IFFLYSWWFP-------------------------------------------------------------------RIT 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 328 FCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEM 407
Cdd:cd17446  174 FCLSLVWFSTSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQDL 253
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 408 QLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGS 487
Cdd:cd17446  254 QTVRTALAVFGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKMLGEYYPFLPLIIYGAAPILSGI 333

                 ....*
gi 257467527 488 AAFFL 492
Cdd:cd17446  334 AACFL 338
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
88-492 2.19e-142

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 414.00  E-value: 2.19e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  88 TQGATEPCLDGWIYNSTRD--TIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGS 165
Cdd:cd17374    1 SEADTEPCVDGWVYDRSKFtsTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 166 SAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAA 245
Cdd:cd17374   81 CAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSVP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 246 FFIFSLLSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrR 325
Cdd:cd17374  161 FFLFFLYSWWLP-------------------------------------------------------------------K 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 326 VTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSS 405
Cdd:cd17374  174 RTLILSFVWFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQ 253
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 406 EMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLG 485
Cdd:cd17374  254 EMQTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVLPILA 333

                 ....*..
gi 257467527 486 GSAAFFL 492
Cdd:cd17374  334 GLLALLL 340
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
97-493 4.14e-97

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 297.57  E-value: 4.14e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  97 DGWIYNSTRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVY 176
Cdd:cd17317    2 WEFDYSVSESTIVTEWDLVCDRDWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 177 MIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFSLLSWWV 256
Cdd:cd17317   82 LVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIRDWRWLQLAISLPGLLFLLLLWWL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 257 PesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVTFCLSLAWFA 336
Cdd:cd17317  162 P-------------------------------------------------------------------RRTIIVGLIWFV 174
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 337 TGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLRTALAV 416
Cdd:cd17317  175 TSLVYYGLSLNSSNLGGNLYLNFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLAL 254
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 417 FGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFLL 493
Cdd:cd17317  255 VGKFAISAAFSVIYLYTAELYPTVVRNTGVGLCSTVARVGAILAPFIVLLGKIGPLLPLIIFGVLALLGGLLTLLLP 331
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
91-492 3.43e-85

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 267.37  E-value: 3.43e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  91 ATEPCLDGWIYNSTR--DTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAA 168
Cdd:cd17447    4 PVVPCQNGWVYDHSTfsSTIATEWDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 169 FSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFI 248
Cdd:cd17447   84 FSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVTLPCAP 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 249 FSLLSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVTF 328
Cdd:cd17447  164 GIITWWWVP-------------------------------------------------------------------KISL 176
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 329 CLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQ 408
Cdd:cd17447  177 CTGIVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINILIPSEFT 256
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 409 LLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSA 488
Cdd:cd17447  257 VVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVILLDDVWLSLPQVIFCGVALLAGGV 336

                 ....
gi 257467527 489 AFFL 492
Cdd:cd17447  337 AFLL 340
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
94-492 1.10e-54

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 187.56  E-value: 1.10e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  94 PCLDGWIYNSTRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSL 173
Cdd:cd17379    7 PCQDGWVYNTPRSSIVTEFNLVCEDAWKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNY 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 174 TVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFSLLS 253
Cdd:cd17379   87 PWFLIFRFLQGLFGKGGWMTGYVLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIPHWRWLQLAVTLPNFLFLLYY 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 254 WWVPESirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrrvTFCLSLA 333
Cdd:cd17379  167 WFIPKH-------------------------------------------------------------------TFILMYA 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 334 WFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLRTA 413
Cdd:cd17379  180 WFTSAVVYQGLIMRLGITGGNLYLDFFISALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPPDLHWLKTT 259
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 414 LAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAP-----LVKITGELqpfiPNVIFGTMTLLGGSA 488
Cdd:cd17379  260 IACVGRLGITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPfllyrLAEIWLEL----PLIVFGVLALVAGGL 335

                 ....
gi 257467527 489 AFFL 492
Cdd:cd17379  336 VLLL 339
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
88-492 3.25e-51

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 178.43  E-value: 3.25e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  88 TQGATEPCLDGWIYNST--RDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGS 165
Cdd:cd17376    1 TQIEQEPCLDGWEYSQDvyLSTIVTEWNLVCEDDWKVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 166 SAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISStTIGYC--YTIGQFILPGLAYAVPQWRWLQLSVS 243
Cdd:cd17376   81 LQIFSPSWEMFTVLFVIVGMGQISNYVVAFVLGTEILGKSVRILFS-TLGVCifYAIGYMLLPLFAYFIRDWRMLLLALT 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 244 AAFFIFSLLSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsil 323
Cdd:cd17376  160 LPGVLCVPLWWFIP------------------------------------------------------------------ 173
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 324 rRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFV 403
Cdd:cd17376  174 -ITTIMSLLLWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLVLGGGVLLFIQLV 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 404 SSEMQLLRTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTL 483
Cdd:cd17376  253 PTDLQVLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVYLGAYDRYLPYILMGSLTV 332

                 ....*....
gi 257467527 484 LGGSAAFFL 492
Cdd:cd17376  333 LIGILTLFL 341
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
99-492 6.62e-43

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 155.98  E-value: 6.62e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  99 WIYNStRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSD-RFGRKPILTWSYLLLAASGSSAAFSPSLTVYM 177
Cdd:cd17378   13 WDGGS-KVSIVSEWGLICAGSFLVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYA 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 178 IFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ-WRWLQLSVSAAFFIFSLLswWV 256
Cdd:cd17378   92 FLRFLTGFGRSGIGTCALVLATEPVGPKWRGQVGMSTFFFFVLGFMSLPGIAYLNGSsWRVLYFWTSIPALIYCIL--VY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 257 PESIRWLVlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrrvtfcLSLAWFA 336
Cdd:cd17378  170 LFARRLLA-----------------------------------------------------------------VMVIGFG 184
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 337 TGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQL-LRTALA 415
Cdd:cd17378  185 IGMVYYGIPLAVGNLKFNIYLSVALNALSELPAFVITAFLLDRFGRRPSLLGFTLLSGASCLLCFVLSIGGTTsLQIALE 264
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 416 VFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17378  265 LVGFFGAAGAFNLLYIYTVELFPTCVRNAALGMLRQALVVGGIFAPFIVSLGRKNAALSFGVFGVAILLLGLFALGL 341
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
101-492 8.65e-42

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 153.40  E-value: 8.65e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 101 YNSTRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFR 180
Cdd:cd17377   20 FSSSFTSIVSEWFLVGNAAYKVSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSR 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 181 FLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFSLLSWWVPESi 260
Cdd:cd17377  100 FLVGVMNGGMSLVAFVLLNECVGKSYWALAGSLGGLFFAVGIAQYALLGYFIRSWRTLAVVVNLQGTLVFLLSLFIPGR- 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 261 rwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrrvTFCLSLAWFATGFA 340
Cdd:cd17377  179 ------------------------------------------------------------------TLILMYVWFVCSLV 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 341 YYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSI--SYLGRRITQGFLLILAGVAILALIFVSSE------MQLLRT 412
Cdd:cd17377  193 YYGLTLNAGDLGGNIYLNLALSGLVELPAYPLCIYLInqKWSGRRRTLAGFLFLGGIACLLVMFVPEKkdsgvfAVVNST 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 413 ALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17377  273 SLSLLGKLTISAAFNIVYIYTSELYPTVVRNAGLGVCSMFSRVGGIIAPFIPSLKSVQWSLPFIVFGASGLSAGLLSLLL 352
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
94-492 4.06e-40

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 148.36  E-value: 4.06e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  94 PCLDGWIYNST--RDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSP 171
Cdd:cd17375    7 SCSDGFVYDQSkwESSIVTDWDLVCDREWLAKLIQPIFMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVAFTF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 172 SLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFSL 251
Cdd:cd17375   87 DYYSFVIVRFLLAMVSSGYLVVVFVYVTEFTGIKARTWASMHVHAFFAVGIMVVALVGYLVRTWWIYQIILSLVTIPFIL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 252 LSWWVPesirwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVTFCLS 331
Cdd:cd17375  167 CCWMLP-------------------------------------------------------------------KRTITVW 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 332 LAWFATGFAYYSLAMGVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLR 411
Cdd:cd17375  180 LIWFTGSLGYYVFSLGSVNLGGNEYLNLFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQDYEVLT 259
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 412 TALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFF 491
Cdd:cd17375  260 IVLSMTGKFAIAIAFGLIYLYTAELYPTIVRSLAVGSGSMMCRVGSVVAPFCVYLSDVWIFLPQLLVGIMAFLSGILTLM 339

                 .
gi 257467527 492 L 492
Cdd:cd17375  340 L 340
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
124-493 6.96e-25

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 106.36  E-value: 6.96e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 124 MAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:cd06174   35 LLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFP 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 204 TSTR----AISSTTIGYCYTIGQFILPGLAYAVPQ-WRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQR 278
Cdd:cd06174  115 ERERgralGLLQAFGSVGGILGPLLGGILASSLGFgWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLK 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 279 vatfngkkeegekltveelkfnlqkditsakvkyglsdLFRVSILRRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIY-- 356
Cdd:cd06174  195 --------------------------------------LLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGgl 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 357 ------ILQIIFGGVDIPAKFITILSISY-LGRRITQGFLLILAGVAILALIFVSSemQLLRTALAVFGKGCLSGSFSCL 429
Cdd:cd06174  237 svavagLLLSLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPS--LLLLLLLLLLLGFGLGGLLPLS 314
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257467527 430 FLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFLL 493
Cdd:cd06174  315 FALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLAAILLL 378
Sugar_tr pfam00083
Sugar (and other) transporter;
127-502 1.20e-24

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 106.59  E-value: 1.20e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  127 SVFMAGILVGGPVFGELSDRFGRKPILTWS---YLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:pfam00083  53 SIFSVGCFIGSLFAGKLGDRFGRKKSLLIAnvlFVIGAVLQGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAP 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  204 TSTRAISSTTIGYCYTIGQFILPGLAYAV------PQWRWLqLSVSAAFFIF-SLLSWWVPESIRWLVLSGKFSKALKTL 276
Cdd:pfam00083 133 KKLRGALGSLYQLAITFGILLAYIFGLGLnktsnsDGWRIP-LGLQLVPALLlIIGLLFLPESPRWLVEKGRLEEAREVL 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  277 QRvatfnGKKEEGEKLTVEELKFNLQKDITSAKVKYGLsdLFRVSILRRVTFCLSLAWFATGFAYYSLAMGveeFGVNIY 356
Cdd:pfam00083 212 AK-----LRGVPDVDRELDEIKDSLEAGQEAEKASWKE--LFSTKTRRQRLLIGVMLQIFQQLTGINAIFY---YSTTIF 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  357 ---------ILQIIFGGVDIPAKFITILSISYLGRRitQGFLLILAGVAIlALIFVSSEMQLLRTALAVFGKGCLSGSF- 426
Cdd:pfam00083 282 enlglsdsfLVTIIVGVVNFVFTFIAIFLVDRFGRR--PLLLLGAAGMAI-CFVILGIVALLGVSKSDWAGIVAIVFIAl 358
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  427 ----------SCLFLYTSELYPTVLRQTGMGIS----NIWARVGSMIAPlvKITGELQPF-IPNVIFGTMTLLGGSAAFF 491
Cdd:pfam00083 359 fiaffamgwgPVPWVIVSELFPLSVRSKAMALAtaanWLANFLIGFLFP--IITDAIGLGyTFFIFAGLLVLFIIFVFFF 436
                         410
                  ....*....|.
gi 257467527  492 LLETLNRPLPE 502
Cdd:pfam00083 437 VPETKGRTLEE 447
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
108-492 6.85e-23

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 100.30  E-value: 6.85e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 108 IVTEWDLvcgSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSI 187
Cdd:cd17372   25 VQCEWNL---SAWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLGL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 188 SGISLStIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAV-PQ--WRWLQLSVSAAFFIFSLLSWWVPESirwlv 264
Cdd:cd17372  102 GGGPQL-ASWYLEFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLVmPRlgWRWLLAFSSVPSSLLLVFYRWTPKT----- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 265 lsgkfskalkTLQRVATFNGkkeegekltveelkfnlqkditSAKVKYGLSdLFRVSILRRVTFCLSLAWFATGFAYYSL 344
Cdd:cd17372  176 ----------TLLLWVIWFG----------------------NAFAYYGVV-LLTTELNNSHNVCGSKSDSDSGESPTEK 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 345 AMgvEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLlrTALAVFGKGCLSG 424
Cdd:cd17372  223 QC--RNSNDVDYRDVFIATFAEFPGLLISAAMIDRLGRKASMASMLFTCCIFLLLLLICQSPFIL--TVLLFGGRACISA 298
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 257467527 425 SFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV-KITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17372  299 AFTVVYIYTPEVYPTAVRALGVGTGSSVGRIGAILCPFIaQVLVHGSQTIALLLFSVVCLVSAICVCLL 367
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
130-463 6.75e-22

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 97.81  E-value: 6.75e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  130 MAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAI 209
Cdd:TIGR00895  62 LIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGT 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  210 SSTTIGYCYTIGqFILPGL--AYAVPQWRWLQLSVSAAF---FIFSLLSWWVPESIRWLVLsgkfSKALKTLQRVATFNG 284
Cdd:TIGR00895 142 AVGLMFCGYPIG-AAVGGFlaGWLIPVFGWRSLFYVGGIaplLLLLLLMRFLPESIDFLVS----KRPETVRRIVNAIAP 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  285 KKEEGEKLTVEELKFNlqkditsAKVKYGLSDLFRVSILRRVTFCLSLAWFATGFAYYSLA-----------MGVEEFGV 353
Cdd:TIGR00895 217 QMQAEAQSALPEQKST-------QGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTnwlpklmvelgFSLSLAAT 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  354 NIYILQiiFGGVdIPAKFITILSISYlGRRITqGFLLILAGVAILALIFVSSEMQLLRTALAVFGKgCLSGSFSCLFLYT 433
Cdd:TIGR00895 290 GGALFN--FGGV-IGSIIFGWLADRL-GPRVT-ALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGF-FVNGGQSGLYALM 363
                         330       340       350
                  ....*....|....*....|....*....|
gi 257467527  434 SELYPTVLRQTGMGISNIWARVGSMIAPLV 463
Cdd:TIGR00895 364 ALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
127-492 1.65e-21

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 96.42  E-value: 1.65e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLStIILNVEWVPTST 206
Cdd:cd17441   41 SVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYSWILVLRGLVGFGIGGVPQS-VTLYAEFLPMKS 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLLSWWVPESIRWlvlsgkfskalktlqrvatfn 283
Cdd:cd17441  120 RAKCILLIEVFWALGTVFEVLLAVFVMPtlgWRWLLILSALPLLIFAVLCFWLPESARY--------------------- 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 284 gkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrRVTFCLSLAWFATGFAYYSLAMGVEEFGVNIYILQIIFG 363
Cdd:cd17441  179 -----------------------------------------WTTILLWFIWFSNAFSYYGLVLLTTELFQAGDVCSGSSG 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 364 GV--------------------------DIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLlrTALAVF 417
Cdd:cd17441  218 KKvegkcsleceylttsdymdllwttlsEFPGLLVTLWIIDRFGRKKTMALCFFVFSFCTLLLFSCVGRFSL--TVLLFI 295
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 257467527 418 GKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV-KITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17441  296 ARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIaQVMLESSVYLTLSVYSGCCLLAAIASCFL 371
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
118-503 5.03e-19

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 90.09  E-value: 5.03e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  118 SNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKP---ILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST 194
Cdd:TIGR00879  69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKsllIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALV 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  195 IILNVEWVPTSTRAISSTTIGYCYTIGQFILPG------LAYAVPQWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGK 268
Cdd:TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGfgsgkvSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGR 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  269 FSKALKTLQRVATFNGK-KEEGEKLTVEELKFNLQKDITSAKVKyGLSDLFRVSILRRVTFCLsLAWF--ATG---FAYY 342
Cdd:TIGR00879 229 VEEARKSLARLRGTSGEdKELLDELELIDIKRSIEKRSVQPSWG-SLFSSTRRIRRRLFLGVV-LQWFqqFTGinaIMYY 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  343 SLAM----GVEE---FGVNiyilqIIFGGVDIPAKFITILSISYLGRRitqgFLLILAGVAILALIFVSSEMQLLRTALA 415
Cdd:TIGR00879 307 SPTIfenaGVSTdhaFLVS-----IIVGAVNFAFTFVAIFLVDRFGRR----PLLLIGAAGMAICLFVLGILGASFVTGS 377
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  416 VFGKGCLSGSFSCLF-------------LYTSELYPTVLRQTGMGIS----NIWARVGSMIAPlvKITGELQPFIPNVIF 478
Cdd:TIGR00879 378 SKSSGNVAIVFILLFiaffamgwgpvpwVIVSEIFPLSLRPKGISIAvaanWLANFIVGFLFP--TMLESIGVGGVFIFF 455
                         410       420
                  ....*....|....*....|....*.
gi 257467527  479 GTMTLLGGSAAFFLL-ETLNRPLPET 503
Cdd:TIGR00879 456 GGLNVLGLIFVYFFLpETKGRTLEEI 481
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
96-457 6.88e-17

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 81.94  E-value: 6.88e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  96 LDGWIYNSTRDTIVTEWDLvcgSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTV 175
Cdd:COG2814   24 LGIGIVLPALPLIAADLGA---SPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWL 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 176 YMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLL 252
Cdd:COG2814  101 LLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADlfgWRWVFLVNAVLALLALLL 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 253 SWW-VPESIRwlvlsgkfskalktlqrvatfngkkeegekltveelkfnlqkdITSAKVKYGLSDLFRVSILRRVTFCLS 331
Cdd:COG2814  181 LLRlLPESRP-------------------------------------------AARARLRGSLRELLRRPRLLLLLLLAF 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 332 LAWFA-TGFAYYSLAMGVEEFGVN---IYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEM 407
Cdd:COG2814  218 LLGFGfFALFTYLPLYLQEVLGLSasaAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLW 297
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 257467527 408 QLLrTALAVFGkGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGS 457
Cdd:COG2814  298 LLL-LALFLLG-FGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
127-493 1.27e-16

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 82.24  E-value: 1.27e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:cd17358   48 SLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNV 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAISSTTIGYCYTIGQFILPGLAYAVPqWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRvatFNGKK 286
Cdd:cd17358  128 RGALGSLNQLLVNIGILLGYVLGSFLP-WRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQF---LRGKD 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 287 EEGEKlTVEELKFNLQKDITSAKvKYGLSDLFRVSILRRVTFCLSLAWF-----ATGFAYYSLAMgVEEFGVNI--YILQ 359
Cdd:cd17358  204 ADISK-EAAEIQEELAELEKEAK-ESSFSDLFQRKYLKPLVIGLGLMLFqqlsgINAVIFYASSI-FDEAGSGLdpNTAT 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 360 IIFGGVDIPAKFITILSISYLGRRItqgfLLIL------AGVAILALIFVSSEMQLLRTALAVFGKGCLS---GSFS--- 427
Cdd:cd17358  281 IIIGVVQVVGTLVATLLVDRLGRRP----LLLVsaigmgIGLLALGLYFYLQEHGALLSSVSWLPLVGLViyiISFSigl 356
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 257467527 428 --CLFLYTSELYPTVLRQTGMGISNIWARVGSmiaplvkitgelqpFIPNVIFGTMTLLGGSAAFFLL 493
Cdd:cd17358  357 gpLPWVIMSEIFPAKIKGLAGSLVTLVNWLFA--------------FIVTKTFPFLTLAWGASGTFWI 410
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
95-254 1.43e-16

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 80.97  E-value: 1.43e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  95 CLDGWIYNST---RDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSP 171
Cdd:cd17445    8 CDAGWNYTGLpglTNNIVTEWDLVCSRYWLVPLEQVCFILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 172 SLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFSL 251
Cdd:cd17445   88 SPSLFMAMRFLLGAALAGVYLTLYLTRLELCDPPQRLLVAMAGGLTMVGGHFLLLGLALGCGSWRVLQGTITAPLSLFLC 167

                 ...
gi 257467527 252 LSW 254
Cdd:cd17445  168 YGC 170
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
127-490 3.87e-16

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 79.95  E-value: 3.87e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:cd17316   43 AAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKR 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAISSTTIGYCYTIGQFILPGLAYAVPQ-------WRWLqLSVSAaffIFSLLSWWvpesirwlvlsgkfskalktlqrv 279
Cdd:cd17316  123 RGFALGLLQSGWALGALLAALVASLLIPllsgdwgWRIL-FLIGA---LPALLALL------------------------ 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 280 atfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsiLRRVTFCLSLAWFATGFAYYSLAMGVEEFGVN----- 354
Cdd:cd17316  175 -------------------------------------------LRRRTLLLILLWFFISFGYYGLTTFLPTYLQTvlgls 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 355 ---IYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGV-AILALIFVSSEMQLLRTALAVFGkGCLSGSFSCLF 430
Cdd:cd17316  212 patSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGIlALPLFYLLSGSPTLLLLLLFILS-FFVGGVWGALY 290
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257467527 431 LYTSELYPTVLRQTGMGISNIWARVGSMIAPLV---KITGELQPFIPNVIFGTMTLLGGSAAF 490
Cdd:cd17316  291 AYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLialLLASTGGTGVPALILALLAIVALIVAL 353
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
84-484 4.67e-16

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 79.43  E-value: 4.67e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  84 LPNDTQgatePCLDGWIYNS---TRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLL 160
Cdd:cd17443    1 PSNLAV----LCTGGWPFSAaagLGSNLVTEWNLVCDDGWKVPLEKISYLLGWLLGYIILGAGCDRLGRRAAFVLSLVLA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 161 AASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQL 240
Cdd:cd17443   77 TLLGVSVALSASPPTFLVLRLLQGGTLAGVFLSLYIARLELCDPSHRLMVSMGAGFFSVAGELLLPGLAVLCRDWRVLQG 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 241 SVSAAFFIfsLLSWWVPESIRWLVLsgkfskalktlqrvatfngkkeegekltveelkfnlqkditsakvkyGLSDLFRV 320
Cdd:cd17443  157 VGTLPLLL--LLLYWCFPSRNGLIL-----------------------------------------------GFTAFIGG 187
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 321 SIlrRVTFCLSLAWFATGFaYYSlamgveefgvniYILQIIFGGVdipAKFITILSISYLGRRitqGFLLILAGVAILAL 400
Cdd:cd17443  188 GI--RYCFARNLAPFVPTF-YLP------------YFLQAGLEAL---ACIFLCLTVDRCGRR---GVLLLGTIVTGLSS 246
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 401 IFVSSEMQLLR----TALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNV 476
Cdd:cd17443  247 LLLLALTQYLHgglvLVLSVVGLLASHAVSMLSMFFAAEVLPTVIRGAGLGLIMGAGFLGRAAGPLMELQNKQGYFLHHV 326

                 ....*...
gi 257467527 477 IFGTMTLL 484
Cdd:cd17443  327 VFASFAVL 334
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
108-257 6.66e-16

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 79.10  E-value: 6.66e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 108 IVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSI 187
Cdd:cd17373   13 AVSKWDLVCDNGWKVHLEQFSLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLEGFCL 92
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 188 SGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLSVSAAFFIFsLLSWWVP 257
Cdd:cd17373   93 AGIILTLYLLRLELCDPGKRLMITMVASLVAVAGQFLMPGLAALCRDWRVLQALIICPFLLM-LLYWSIF 161
MFS_SLC22A23 cd17444
Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier ...
100-484 9.94e-16

Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier family 22, member 23 (SLC22A23) is an orphan member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It is abundantly expressed in brain and is also found in liver. Single-nucleotide polymorphisms in SLC22A23 are associated with inflammatory bowel disease (IBD) in a Canadian white population. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A23 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341002 [Multi-domain]  Cd Length: 364  Bit Score: 78.74  E-value: 9.94e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 100 IYNSTRDTIVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIF 179
Cdd:cd17444   16 IRAGLVQNIVSKWDLVCDSSWKVHIAKFSLLVGLIFGYLITGCLADWFGRRPVLLFSVVFILIFGLTVALSVNVTMFSTL 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 180 RFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQlSVSAAFFIFSLLSWWV-PE 258
Cdd:cd17444   96 RFFEGFCLAGIILSLYALRIELCPPGHRFMITMVASFIAMAGQFLMPGLAALCRDWQVLQ-AVIICPFLLMLSYWCIfPK 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 259 SIrwLVLSgkfskalktlqrVATFNGkkeegekltveelkfnlqkditsakvkYGLSDLFRVSILRRVTfclslawfatg 338
Cdd:cd17444  175 NI--VVLC------------VNSLTG---------------------------YGIHHCFAKSMMDHEM----------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 339 fayyslamgVEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAIL----ALIFVSSEMQLLRTAL 414
Cdd:cd17444  203 ---------KGSFLHNFYAEYYTMAVIALASCLAMCPVVGFLGRRGGLLLFMILTALASLlqlgLLNLIGKYSQHPDSGM 273
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 415 AVFGKGCLSGSFSCLFLYTS------------ELYPTVLRQTGMGISNIWARVGSMIAPLVKITGELQPFIPNVIFGTMT 482
Cdd:cd17444  274 SDEVKDKFSVTFSIVGMFSShavgslsvffcaEITPTVIRGGGLGLVLASAGFGMLTAPIMELHNQKGYFLHHIIFACCT 353

                 ..
gi 257467527 483 LL 484
Cdd:cd17444  354 LI 355
MFS_1 pfam07690
Major Facilitator Superfamily;
124-461 1.90e-15

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 77.84  E-value: 1.90e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  124 MAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:pfam07690  36 LLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFP 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  204 TSTRAISSTTIGYCYTIGQFILPGLA---YAVPQWRWLqLSVSAAFFIFSLLSWWVPESirwlvlsgkfskalktlQRVA 280
Cdd:pfam07690 116 PEERGRALGLVSAGFGLGAALGPLLGgllASLFGWRAA-FLILAILSLLAAVLLLLPRP-----------------PPES 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  281 TFNGKKEEGEKLTVEELKfnlqkditsakvkyglsdlfrvSILRRVTFCLSLAWFATGFAYYSLAMGV----EEFGVNIY 356
Cdd:pfam07690 178 KRPKPAEEARLSLIVAWK----------------------ALLRDPVLWLLLALLLFGFAFFGLLTYLplyqEVLGLSAL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  357 ILQIIFGGVDIPAKFITILSISYLGR-----RITQGFLLILAGVAILALIFVSSEMQLLRTALAVFGKGcLSGSFSCLFL 431
Cdd:pfam07690 236 LAGLLLGLGGLLGAIGRLLLGRLSDRlgrrrRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFG-FGLVFPALNA 314
                         330       340       350
                  ....*....|....*....|....*....|
gi 257467527  432 YTSELYPTVLRQTGMGISNIWARVGSMIAP 461
Cdd:pfam07690 315 LVSDLAPKEERGTASGLYNTAGSLGGALGP 344
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
132-492 1.38e-14

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 75.61  E-value: 1.38e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 132 GILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISlSTIILNVEWVPTSTRAISS 211
Cdd:cd17442   48 GYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMVGCGVSGHS-QGLIIKTEFLPTKYRGYML 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 212 TTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLLSWWVPES-----IRWLVLSGKFSkalktlqrvatfn 283
Cdd:cd17442  127 PLSQIFWLAGSLLIIGLASVVIPtlgWRWLIRFASIPGIILIVVFKFIPRTtlqiwVIWLGISFAYY------------- 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 284 gkkeeGEKLTVEELkfnLQKDITSAKVKYGLSDLFRVSILRRVTFClslawfatgfayyslamgvEEFGVNIYILQIIFG 363
Cdd:cd17442  194 -----GVILASSEL---LERNLLCGSDPSDEEAGIKHIESESPCYC-------------------HMFNPSDYQTMIIST 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 364 GVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLlrTALAVFGKGCLSGSFSCLFLYTSELYPTVLRQ 443
Cdd:cd17442  247 LGEIALNPLNILGINFLGRRLSLVITMGLTAIFFLLLNICTSSAGL--TIFLFMLRALVSANFNTVYIYTAEVYPTTMRA 324
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 257467527 444 TGMGISNIWARVGSMIAPLV-KITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17442  325 LGMGTSGSLCRIGAMVAPFIsQVLMSASVLGALCLFSSVCIVCAISAFTL 374
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
124-498 2.93e-14

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 74.14  E-value: 2.93e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 124 MAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:COG2271   49 LLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFP 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 204 TSTRAISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLLSWWVpesirwlvlsgkfskalktlqrva 280
Cdd:COG2271  129 PKERGRALGIFNAGGPLGGALAPPLLGWLLAafgWRAAFLILGLPGLLLALLRFWL------------------------ 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 281 tfngkkeegekltveelkfnlqkditsakvkyglsdlfrvsilrrvtfcLSLAWFATGFAYYSLA-----MGVEEFGVNI 355
Cdd:COG2271  185 -------------------------------------------------LALAYFLVYFALYGFLtwlptYLVEVRGLSL 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 356 Y---ILQIIFGGVDIPAKFITILSISYLGRR--ITQGFLLILAGVAILALIFVSSEMQLLrTALAVFGkGCLSGSFSCLF 430
Cdd:COG2271  216 AqagLLLSLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAI-ALLFLAG-FGLGGAFGLLW 293
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257467527 431 LYTSELYPTVLRQTGMGISNIWARVGSMIAP-----LVKITGELQPFIpnvIFGTMTLLGGSAAFFLLETLNR 498
Cdd:COG2271  294 ALAAELFPKKARGTASGLVNTFGFLGGALGPllvgyLLDATGYQAAFL---LLAALALLAALLALLLLRETRK 363
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
96-495 5.70e-13

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 70.41  E-value: 5.70e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  96 LDGWIYNSTRDTIVTEWDLvcgSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTV 175
Cdd:cd17371   13 FDLLLLGLVLPALIAEFGL---DEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQ 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 176 YMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ-------WRWLQLSVSAAFFI 248
Cdd:cd17371   90 LLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPllppeiaWRVLFLLGALPALL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 249 FSLLSWWVPESIRWLVLSGKFSkalKTLQRVATFNGKKEEGEKLTVeelkfnlqkditsakvkyglsdlfRVSILrrVTF 328
Cdd:cd17371  170 VLFIRRFVKEPPQWQAARAARR---HFADRPSLRELFSPPLLRTTL------------------------LASLL--ATG 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 329 CLSLAWFATGF--AYYSLAMGVEEFGVNIYILQIIFGGvdIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSE 406
Cdd:cd17371  221 ALGGYYGITTWlpSYLTGERGLSFEGSAGYLVVTILGG--FLGYLAGGFLADRIGRRNNFALFALGSAISILLYFFLPLS 298
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 407 MQLLRTALAVFGKgCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV----KITGELQPFIpNVIFGTMT 482
Cdd:cd17371  299 PTLILILGFPLGF-FASGPFSGMGAYLTELFPTAVRATAQGFCYNVGRIIGALFPFLvgflATSGSLGTAI-AVFAAVYY 376
                        410
                 ....*....|...
gi 257467527 483 LLGGSAAFFLLET 495
Cdd:cd17371  377 IAGLVLALLLPET 389
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
127-503 1.85e-11

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 66.13  E-value: 1.85e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLA---ASGSSAAFSPSLTVYMIFRFLCGCSiSGISLSTIILNV-EWV 202
Cdd:cd17357   56 SIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVvssLLMFLSKSAKSPELLIFGRFLVGIA-CGLSTGFVPMYLqEIS 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 203 PTSTRAISSTTIGYCYT----IGQFI-LPGLAYAVPQWRWLqLSVSAAFFIFSLL-SWWVPESIRWLVLS-GKFSKALKT 275
Cdd:cd17357  135 PSELRGALGSLTQIGVTlgilLGQVFgLPSVLGTETLWPYL-LFFPGIPALLQLAaLPFFPESPKFLLISkGDEEEAEKS 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 276 LQRV-ATFNGKKEEGEKLTVEELKFNLQKDITsakvkygLSDLFRVSILRR---VTFCLSLAWFATGFA---YYSLAMgV 348
Cdd:cd17357  214 LKFLrGIEDDVDQELEEIKKESEQMGDQKQVS-------LMQLLRDPSLRLpllLVLVVSASQQFSGINaifFYSTFI-F 285
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 349 EEFGVNIYILQIIFGGVDIPAKFITILS---ISYLGRRItqgFLLILAGVAILALIFVSSEMQLLRTaLAVFGKGCLSGS 425
Cdd:cd17357  286 ENAGFSPQLAEWANLGIGIVNVLSTIVGpflIEKVGRRP---LLLISLSVCAVALLLMSVFLFLSEQ-NSWMSYGCIVAI 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 426 FSCLFLY-----------TSELYPTVLRQTGMGISNIWARVGS----MIAPLVKITGELQPFIPNVIFGTMTLLggsaaf 490
Cdd:cd17357  362 FLFIFFFaiglgpipwfiGAELFPQAPRSAAQSLGSSVNWTSNfivgMAFPPLQSIGGGFVFIIFAIPCALFLL------ 435
                        410
                 ....*....|...
gi 257467527 491 FLLetlnRPLPET 503
Cdd:cd17357  436 YLY----RYLPET 444
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
126-265 1.68e-09

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 59.51  E-value: 1.68e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 126 QSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILnVEWVPTS 205
Cdd:cd17330   40 QSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGGNVSVAQAYI-ADITDEE 118
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257467527 206 TRAISSTTIGYCYTIGQFILPGLAYAVPQWRWLQLS--VSAAFFIFSL-LSWWVPESIRWLVL 265
Cdd:cd17330  119 ERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPflVAAALALLNLvLVLFFLPPLRRLLL 181
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
96-266 2.58e-09

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 58.67  E-value: 2.58e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  96 LDGWIYNSTRDTIVTEWDLvcgSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTV 175
Cdd:COG0477   28 LDFTIVNVALPSIAADLGA---SSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPEL 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 176 YMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSAAFFIFSLL 252
Cdd:COG0477  105 LIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAalgWRWIFLINAPLGLLALVL 184
                        170
                 ....*....|....
gi 257467527 253 SWWVPESIRWLVLS 266
Cdd:COG0477  185 RLRLPESRGLLLAL 198
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
127-502 3.70e-09

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 58.74  E-value: 3.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:COG2223   47 AIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDR 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 R----AISSTTIGYCYTIGQFILPGLAYAVPqWRWLQLSVSAAFFIFSLLSWWVpesirwlvlsgkfskalktLQRVATF 282
Cdd:COG2223  127 RglalGLAAGGGNLGAAVAAFLAPLLIAAFG-WRNAFLILGILLLVVAVLAWLF-------------------LRDPPAG 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 283 NGKKEEGEKLTveelkfnlqkditsakvkyglsdlFRVSILRRVTFCLSLAWFATGFAYYSLA-----MGVEEFGVNIYI 357
Cdd:COG2223  187 AAAAAKASLRD------------------------QLEALRDPRFWLLSLLYFGTFGSFIGFSswlppYLVDQFGLSAAT 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 358 LQIIFGGVDIPAKFITIL--SIS-YLGRRITQGFLLILAGVAILALIFVSSEMQLLRTALAVFGkGCLSGSFSCLFLYTS 434
Cdd:COG2223  243 AGLLAALFALLGALGRPLggWLSdRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLG-LALGGGNGAVFALVP 321
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257467527 435 ELYPTVLRQTGMGISNIWARVGSMIAPLV-----KITGELQPFIpnVIFGTMTLLGGSAAFFLLETLNRPLPE 502
Cdd:COG2223  322 DIFPTKNAGAVYGLVGAAGGLGGFLGPLLfgallDATGSYTAAF--LVFAVLALVALVLTLLLYRRPRRAAAA 392
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
121-493 3.90e-09

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 58.74  E-value: 3.90e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 121 LKEMAQSVFMAGILVGG---------PVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGIS 191
Cdd:cd17325   23 AESLGASVAQIGLIVAAyalaqllfsPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVW 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 192 LSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILP---GLAYAVPQWRWLQLsVSAAFFIFSLLswwvpesIRWLVLSGK 268
Cdd:cd17325  103 PAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPllgGLLADALGYRAPFL-VCAALALLALV-------LALLLLPEP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 269 FSKALKTLQRVATFNGKkeegekltveelkfnlqkditsakvkyglsdlFRVSILRRVTFCLSLAWFATGFAYYSLA--- 345
Cdd:cd17325  175 RPPPNKRAVSAARLRSG--------------------------------LRLLLRDRRLLALFLAIFVLAFAFGALEpfl 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 346 --MGVEEFGVNIYILQIIFGGVDIPAKFITILSISY---LGRRITQGFLLILAGVAILALIFVSSEMQLLrtALAVFGKG 420
Cdd:cd17325  223 plYAAELGGLSPAQIGLLFGAQGLASALSQPPAGKLsdrIGRKPLILIGLLLSAVALLLLPLATSFWLLL--LLLALLGL 300
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257467527 421 CLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV--KITGELQPFIPNVIFGTMTLLGGSAAFFLL 493
Cdd:cd17325  301 GLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLggFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
127-463 4.32e-09

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 58.37  E-value: 4.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:cd17365   41 SAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARR 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAiSSTTIGYC-YTIGQFILPGLAYA-VPQWRWlqlsvsaaffifsllswwvpesiRWLVLSGkfskalktlqrvatfng 284
Cdd:cd17365  121 RS-LAVTLMFCgYPLGAALGGFLAAAlIPAFGW-----------------------RSVFLLG----------------- 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 285 kkeegekltveelkfnlqkditsakvkyGLSDLFrVSILRRVTFCLSLAWFATGFAYYSL---------AMGVEEFGVNI 355
Cdd:cd17365  160 ----------------------------GVPPLI-LLPLLRGTLLLWVTFFMGLLLVYLLnswlpklmvEAGYSLSQALT 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 356 YILQIIFGGVdipakfITILSISYL----GRRITQGFLLILAGVAILALIFVSSEMQLLRTALAVFGKgCLSGSFSCLFL 431
Cdd:cd17365  211 ITLLLNIGGV------IGSLLLGWLadrfGPKRVLALFFALGAVSLALLGVSPASLVLLYVLVFLAGA-CVNGAQVGLYA 283
                        330       340       350
                 ....*....|....*....|....*....|..
gi 257467527 432 YTSELYPTVLRQTGMGISNIWARVGSMIAPLV 463
Cdd:cd17365  284 LAARFYPTEVRATGVGWALGVGRLGAILGPLL 315
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
115-495 8.35e-08

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 54.80  E-value: 8.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 115 VCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST 194
Cdd:cd17363   29 MCLSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGYGFFLFCRLLSGIGIGGSIPIV 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 195 IILNVEWVPTSTRAISSTTIGYCYTIGQF--------ILP--------GLAYAVPQWRWLQLsVSAAFFIFSLLSW-WVP 257
Cdd:cd17363  109 FSYFAEFLAREKRGEHLSWLCMFWMIGGLyasamawaIIPhygwgfsmGTAYQFHSWRVFVI-VCALPSVASVVALtFMP 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 258 ESIRWLVLSGKFSKALKTLQRVATFN-GKKEEGEKltveelkfnlqkditsakvkyglsdLFRVS-ILRRVTFCLSLAWF 335
Cdd:cd17363  188 ESPRFLLEVGKHDEAWMILKQVHDTNmRAKGHPER-------------------------VFTVShIKRMNTLFLAIVWF 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 336 ATGFAYYSLAM-------------------------GVEEFGVNIYILQIIFGGVD------------------------ 366
Cdd:cd17363  243 TMSFSYYGLTVwfpdmikylqfedslfeecyfedvtSTNTFFENCTFINTVFYNTDlfeykfidsrflnstfflkekcgc 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 367 -----------------------IPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLrTALAVFGkGCLS 423
Cdd:cd17363  323 hlnddeenayliylvsflgslsvLPGNIVSALLMDKIGRLKMIGGSMLLSAVCCFFLFFGNSESAMI-GLQCLFC-GVSI 400
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 424 GSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMI-----APLVKITgelqPFIPNVIFGTMTLLGGSAAFFLLET 495
Cdd:cd17363  401 AAWNALDVVTVELYPTDKRATAFGFLNGLCKLAAILgnsifGSFVGIT----KVIPILLASAALVCGGLLALKLPET 473
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
124-268 2.05e-07

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 53.34  E-value: 2.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 124 MAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVP 203
Cdd:cd17359   40 LVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASALVPMYIAEVAP 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 204 TSTRAISSTTIGYCYTIGQFilpgLAYAV---------------PQWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGK 268
Cdd:cd17359  120 AEIRGRLVSLNQLMIVFGQL----LAYIVnylianaggadwlgaEGWRWMLGLEAIPAILFLLGMLFIPESPRWLVSKGK 195
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
117-259 6.95e-07

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 51.42  E-value: 6.95e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 117 GSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGcsiSGISLSTII 196
Cdd:cd17315   31 LSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLG---LGVGLASVL 107
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 257467527 197 LNV---EWVPTSTRAISSTTIGYCYTIGQFILPGLAYAVPQ-----WRWLQLSVSAAFFIFSLLSWWVPES 259
Cdd:cd17315  108 VPLyisEIAPAKIRGALGTLNQLMITFGILLAYLLGLALSLsppgwWRLMFALAAVPALLQLLLMFFLPES 178
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
127-492 3.51e-06

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 49.09  E-value: 3.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST-IILNvEWVPTS 205
Cdd:cd17477   38 SAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSeSWLN-ALATNE 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 206 TR----AISSTTIGYCYTIGQFILPglayAVPQWRWLQLSVSAAFFIFSLlswwVPESIRWLVlsgkfskalktlqrvat 281
Cdd:cd17477  117 NRgrvlGLYSTVLGLGFALGPLLLA----LVGTAGALPFLIAAVLLLLAL----VPLLLTRRA----------------- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 282 fNGKKEEGEKLtveelkfnlqkditsakvkyGLSDLFRVSILrrvtfcLSLAWFATGFA---------YYSLAMGVEEFG 352
Cdd:cd17477  172 -APEIEEAESI--------------------SLRRLLRIAPL------ALLGAFVAGFLegafysllpLYGLRLGLSVAQ 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 353 VNIYILQIIFGGVdIPAKFITILSISYlGRRITQGFLLILAGVAILALIFVSSEMQLLRTALAVFGkGCLSGSFSCLFLY 432
Cdd:cd17477  225 AALLLAAFVLGGL-LLQWPLGWLADRF-DRRRVLLGCALLGALAALLLPLVPGLPLALLVLLFLWG-GAAGPLYTLALAL 301
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 433 TSELYPTVLRQTGMGISNIWARVGSMIAPLVkITGELQPFIPNVIFGTMTLLGGSAAFFL 492
Cdd:cd17477  302 AGDRLPGDELVAANAALLLLYGLGSVIGPLL-AGALMDAFGPHGLFLFLAAVALLFLLFL 360
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
111-346 5.68e-06

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 49.20  E-value: 5.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  111 EWDLvCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGI 190
Cdd:TIGR01299 194 EKDL-CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGA 272
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  191 SLSTIILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYA-VPQWRWlQLSVSAAffiFSLLSWWV------------- 256
Cdd:TIGR01299 273 IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAiIPHYGW-SFQMGSA---YQFHSWRVfvivcafpcvfai 348
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  257 ------PESIRWLVLSGKFSKALKTLQRVATFNGK-KEEGEKL-TVEELK--------FNLQKDITSAKVKYG---LSDL 317
Cdd:TIGR01299 349 galtfmPESPRFFLENGKHDEAWMILKLIHDTNMRaKGHPEKVfSVNHIKtihqedelIEIESDTGTWYQRCFvraLSEG 428
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 257467527  318 FRVSI---------LRRVTFCLSLAWFATGFAYYSLAM 346
Cdd:TIGR01299 429 GGIWGnflrcfnpeVREITIKLMGVWFTLSFGYYGLSV 466
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
108-262 9.18e-06

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 48.04  E-value: 9.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 108 IVTEWDLVCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSI 187
Cdd:cd17360   23 IKDDLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGV 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 188 sGISLSTIILNV-EWVPTSTRAISSTTIGYCYTIGQFILPGLAYA---VPQ-WRW-LQLS-VSAAFFIFSLLswWVPESI 260
Cdd:cd17360  103 -GIASMTVPLYIaEAAPPRIRGRLVTINVLFITGGQFVAYVINGAfsyLPGgWRWmLGLAaVPAVLQFIGLL--FLPESP 179

                 ..
gi 257467527 261 RW 262
Cdd:cd17360  180 RW 181
xylE PRK10077
D-xylose transporter XylE; Provisional
235-517 3.37e-05

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 46.61  E-value: 3.37e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 235 WRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTLQRVatfNGKKEEGEKLtvEELKFNLQKDITSAK--VKY 312
Cdd:PRK10077 193 WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKI---MGNTLATQAL--QEIKHSLDHGRKTGGklLMF 267
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 313 GLSDLFrVSILrrvtfcLSLAWFATGF---AYYSL----AMGVEefGVNIYILQIIFGGVDIPAKFITILSISYLGRRIt 385
Cdd:PRK10077 268 GVGVIV-IGVM------LSVFQQFVGInvvLYYAPeifkTLGAS--TDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP- 337
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 386 qgfLLILAGVAILALIFVssemqlLRTALAVFGKGclSGSFSCLFLYT---------------SELYPTVLRQTGMGISN 450
Cdd:PRK10077 338 ---LQIIGALGMAIGMFS------LGTAFYTQAPG--IVALLSMLFYVaafamswgpvcwvllSEIFPNAIRGKALAIAV 406
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 451 I--WAR---VGSMIAPLVKITGELQPFIPNVIFGTMTLLGGSAAFFLLetlnRPLPE----TIEDIQD-WYQQTKKT 517
Cdd:PRK10077 407 AaqWIAnyfVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW----KFVPEtkgkTLEEMEAlWEPETKKT 479
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
123-431 3.95e-05

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 46.03  E-value: 3.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 123 EMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST--IILNVE 200
Cdd:cd17320   37 QLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAAGSVVAraIVRDLY 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 201 WVPTSTRAISSTTIGYCY------TIGQFILpglayAVPQWRwlqlSVSAAFFIFSLLSwwvpesirwLVLSGKFSKalk 274
Cdd:cd17320  117 SGAELAKIFSLLMMILAIapalapLLGGLLL-----LFFGWR----AIFVFLALLGLLL---------LLLVLLFLP--- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 275 tlqrvatfngkkeegEKLTVEELKFNLQKDITSAKvkyglsDLFRVSILRRVTFCLSLAwFATGFAYYSLA--MGVEEFG 352
Cdd:cd17320  176 ---------------ETLPEEKRKPLLSSLLRAYK------RVLKNRRFLGYALALGLS-FAGLFAYLAAApfIYIEQLG 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 353 VNIYILQIIFGGVdIPAKFITILSISYLGRRITQG-------FLLILAGVAILA---LIFVSSEMQLLRTALAVFGKGCL 422
Cdd:cd17320  234 LSPAQFGLLFALN-AIALILGSLLNGRLVRRFGPRrllrlglLLLLAAALVLLLaalLGGLSLWPLVAPLFLIFFGFGLI 312

                 ....*....
gi 257467527 423 SGSFSCLFL 431
Cdd:cd17320  313 FPNATSLAL 321
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
115-346 5.52e-05

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 45.79  E-value: 5.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 115 VCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST 194
Cdd:cd17439   29 MCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 195 IILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYA-VPQWRWlqlsvsaaffIFSLLSWWVPESIRWLVLSGKFSK-- 271
Cdd:cd17439  109 FSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAiIPHYGW----------SFQMGSAYQFHSWRVFVLVCAFPSvf 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 272 ---ALKTLQRVATF---NGKKEEGEKLtveeLKfnlQKDITSAKVKYGLSDLFRVS-ILRRVTFCLSLAWFATGFAYYSL 344
Cdd:cd17439  179 aigALTTMPESPRFfleNGKHDEAWMV----LK---QVHDTNMRAKGHPERVFSVThIKRRITLMMMAVWFTMSFSYYGL 251

                 ..
gi 257467527 345 AM 346
Cdd:cd17439  252 TV 253
PRK12307 PRK12307
MFS transporter;
135-262 6.04e-05

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 45.69  E-value: 6.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 135 VGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRAISSTTI 214
Cdd:PRK12307  68 FGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFL 147
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 257467527 215 GYCYTIGQFIlpgLAYAVPQ------WRwlqlsvsAAFFIF---SLLSWWV----PESIRW 262
Cdd:PRK12307 148 VSGFGIGNII---AAYFMPSfaeaygWR-------AAFFVGllpVLLVIYIraraPESKEW 198
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
320-495 7.13e-05

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 45.35  E-value: 7.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 320 VSILRRVTFCLSLAWFATGFAYYSL---------------AMGVEEFGVNIYILQ-IIFGGVDIPAKFITILSISYLGRR 383
Cdd:cd17364  191 VLYFRKHLLGTAGTWFLLDIAFYGQnlfqstiisaigfskTMNAYQELFNIAVGQlIIALAGTVPGYWFTVFLIDRIGRK 270
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 384 ITQGFLLILAGVAILALIFVSSEMQLLRT-ALAVFGKGCLSGSF---SCLFLYTSELYPTVLRQTGMGISNIWARVGSMI 459
Cdd:cd17364  271 KIQMMGFFGMTIFLLILAGPYDHWKISTIgFFVLYGLTFFFSNFgpnTTTFIVPAEVFPARVRSTCHGISAASGKIGAIV 350
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 257467527 460 A-----PLVKITGELQPFIpnvIFGTMTLLGGSAAFFLLET 495
Cdd:cd17364  351 GsflflSLTQNIGVRNVLI---ILAGVALLGIILTLLFPEE 388
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
121-463 7.46e-05

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 44.89  E-value: 7.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 121 LKEMAQSVFMAGILVGG---------PVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGIS 191
Cdd:cd17489   23 AHDLGGSEAVAGLVVGLftlaallarPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFT 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 192 LSTIILNVEWVPTSTRAissTTIGY---CYTIGQFILPGLAYAVPQWrwlqLSVSAAFFIFSLLSwwvpeSIRWLVLSGk 268
Cdd:cd17489  103 TAAATLVADIIPPSRRG---EGIGYyglATTLAMALGPALGLFLYQH----LGFAVLFIVAAVLA-----LLALLLVFL- 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 269 fskalktlqrvatfngkkeegekltveeLKFNLQKDITSAKVKYGLSDLFRVSILRRVTFCLSLAWFATG-FAYYSLAMG 347
Cdd:cd17489  170 ----------------------------VKDPPPVAAEEAEAGTRAFRRLVEKKVLPPALILFLASIAYGaISTFLPLYA 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 348 VEEFGVNIYILQIIFGGVDIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLRTAlAVFGKGCLSGsFS 427
Cdd:cd17489  222 AERGISNAGLFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAA-VLYGLGFGLL-FP 299
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 257467527 428 CLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV 463
Cdd:cd17489  300 ALQALAVDLVPPHRRGAANGTFFIFFDLGIGLGGLL 335
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
127-276 7.71e-05

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 45.21  E-value: 7.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSiSGISLSTIILNV-EWVPTS 205
Cdd:cd17434   48 SVFTLGAAAGGLSAMFLNDRLGRKLSIMFSAVPSALGYLLMGSAQGIWMLLLGRFLTGFA-GGITAASIPVYVsEISHPG 126
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 257467527 206 TRAISSTTIGYCYTIGQFILPGLAYAVPqWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLSGKFSKALKTL 276
Cdd:cd17434  127 VRGALGACPQIMAVFGSLALYALGLLLP-WRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKALKAL 196
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
131-502 9.06e-05

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 45.10  E-value: 9.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  131 AGILVGGPVFGELSDRFGRKPIL---TWSYLLLAASGSSAAFSPSLTVYMI---FRFLCGCSISG-ISLSTIILNvEWVP 203
Cdd:TIGR00887  67 IGTLAGQLFFGWLADKLGRKRVYgmeLIIMIIATVASGLSPGSSPKSVMATlcfWRFWLGVGIGGdYPLSAIITS-EFAT 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  204 TSTR------------------AISSTTIGYCYTiGQFILPG-----LAYAVPQ----WRWLQL--SVSAAFFIFSLLSw 254
Cdd:TIGR00887 146 KKWRgammaavfamqgfgilagAIVALIVLAGFK-HSLEAAAdeascTGSCVPAvdymWRILIGfgAVPALLALYFRLT- 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  255 wVPESIRWLVLSGKfsKALKTLQRVATFNGKKEEGEKLTVEELKfnlqKDITSAKVKYglSDLFRVSILRR---VTFCLS 331
Cdd:TIGR00887 224 -IPETPRYTADVAK--DVEQAASDMSAVLQVKIEAEPDEVEKAS----TAVEVPKASW--SDFFTHFFKWRhgkHLLGTA 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  332 LAWFATGFAYYSL------------------AMGVEEFGVNIYILQIIF---GGVdiPAKFITILSISYLGRRITQ--GF 388
Cdd:TIGR00887 295 GSWFLLDIAFYGVnlnqkvilsaigysppaaTNNAYEELYKTAVGNLIIalaGTV--PGYWVTVFLVDIIGRKPIQlmGF 372
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  389 LLILAGVAILALIF--VSSEMQLLRTALAVFGKGClsGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIA-----P 461
Cdd:TIGR00887 373 FILTVLFFVLGFAYnhLSTHGFLAIYVLAQFFANF--GPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGqfgflY 450
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 257467527  462 LVKITG-----ELQPFIPNV--IFGTMTLLGGSAAFFLLETLNRPLPE 502
Cdd:TIGR00887 451 LAQHGDptkgyPTGIWMGHVleIFALFMFLGILFTLLIPETKGKSLEE 498
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
115-346 1.23e-04

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 44.53  E-value: 1.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 115 VCGSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST 194
Cdd:cd17438   29 MCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFLSSFVQGYGAFLFCRLISGFGIGGSLPIV 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 195 IILNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAYA-VPQWRW-------LQLSVSAAFFIFSLLSW--------WVPE 258
Cdd:cd17438  109 FAYFSEFLAREKRGEHLSWLCMFWMIGGLYASAMAWSiIPHYGWgfsmgtnYHFHSWRVFVIICALPCiasiialkFMPE 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 259 SIRWLVLSGKFSKALKTLQRVATFNGK-KEEGEKltveelkfnlqkditsakvkyglsdLFRVS-ILRRVTFCLSLAWFA 336
Cdd:cd17438  189 SPRFLLEMGKHDEAWMILKNIHDTNMRaKGTPEK-------------------------VFTVSnIKRKNTLFLAVVWFT 243
                        250
                 ....*....|
gi 257467527 337 TGFAYYSLAM 346
Cdd:cd17438  244 MAFSYYGLTV 253
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
367-495 1.27e-04

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 44.97  E-value: 1.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  367 IPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLrTALAVFGkGCLSGSFSCLFLYTSELYPTVLRQTGM 446
Cdd:TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMI-ALLCLFG-GLSIAAWNALDVLTVELYPSDKRATAF 686
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 257467527  447 GISNIWARVG-----SMIAPLVKITGElqpfIPNVIFGTMTLLGGSAAFFLLET 495
Cdd:TIGR01299 687 GFLNALCKAAavlgiLIFGSFVGITKA----APILFASAALACGGLLALKLPDT 736
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
126-252 1.85e-04

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 43.72  E-value: 1.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 126 QSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGC------SISGISLSTIILNV 199
Cdd:cd17323   40 VSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFfgssplAIGAGTIADLFTPE 119
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 257467527 200 EwvptstraiSSTTIGYcYTIGQFILPGLA-------YAVPQWRW---LQLSVSAAFFIFSLL 252
Cdd:cd17323  120 E---------RGKAMGV-YSLGPLLGPALGpiiggfiTQSLGWRWifwFLAIISGFCLILIFL 172
MFS_1 pfam07690
Major Facilitator Superfamily;
326-507 2.00e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 43.56  E-value: 2.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  326 VTFCLSLAWFATGFAYYSLAMgvEEFGVNIYILQIIFGGVDIpAKFITILSISYL----GRRITQGFLLILAGVAILALI 401
Cdd:pfam07690   4 AAFLAALGRSLLGPALPLLLA--EDLGISPTEIGLLLTLFSL-GYALAQPLAGRLsdrfGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  402 FVSSEMQLLrtALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV--KITGELQPFIPNVIFG 479
Cdd:pfam07690  81 FASSLWLLL--VLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLggLLASLFGWRAAFLILA 158
                         170       180
                  ....*....|....*....|....*...
gi 257467527  480 TMTLLGGSAAFFLLETLNRPLPETIEDI 507
Cdd:pfam07690 159 ILSLLAAVLLLLPRPPPESKRPKPAEEA 186
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
127-263 2.07e-04

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 43.78  E-value: 2.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKP-ILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTS 205
Cdd:cd17356   52 SIVNLGSFFGALISSFLSDRIGRKKsIQIGCVIYIIGAIIQVAAIGKWYQLIVGRIIAGLGVGFASVLVPVYQSEVAPKH 131
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 257467527 206 TRAISSTTIGYCYTIGQFILPGLAYAV------PQWRwLQLSVSAAFFIFSLL-SWWVPESIRWL 263
Cdd:cd17356  132 IRGTLVSLYQLAITIGILVAYCINYGThkldgsAQWR-IPLGLQIVWGLLLLIgMFFLPESPRWL 195
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
117-230 2.18e-04

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 43.70  E-value: 2.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 117 GSNKLKEMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPsLTVYMIFRFLCGCSISGISLSTII 196
Cdd:cd17478  227 YSLVFAGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTP-GIWSYILLVLAGFLLFASFPVTVV 305
                         90       100       110
                 ....*....|....*....|....*....|....
gi 257467527 197 LNVEWVPTSTRAISSTTIGYCYTIGQFILPGLAY 230
Cdd:cd17478  306 LAQELLPGNVGLASGLMMGLSFGLGGIGAPVLGA 339
2_A_01_02 TIGR00880
Multidrug resistance protein;
129-259 2.51e-04

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 41.48  E-value: 2.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527  129 FMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTSTRA 208
Cdd:TIGR00880   7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 257467527  209 ISSTTIGYCYTIGQFILPGLAYAVPQ---WRWLQLSVSA-AFFIFSLLSWWVPES 259
Cdd:TIGR00880  87 VALGLMSAGIALGPLLGPPLGGVLAQflgWRAPFLFLAIlALAAFILLAFLLPET 141
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
118-269 2.86e-04

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 43.37  E-value: 2.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 118 SNKLKEMAQSVFMAGI---------LVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSIS 188
Cdd:cd17390   20 STHIRSLGASPTVIGLigsvygalqLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRIPLGIFKH 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 189 GISLSTIILNvEWVPTSTRAISSTTIGYCYTIGqFIL-PGLAYAVPQW----RWLQLSVSAAFFIFSLLSWWVPeSIRWL 263
Cdd:cd17390  100 TQSLCKAYLS-DLVSEQERSRVLGRFNAASSLG-FILgPVVGGHLAETdggfYYVALLCSAIFILNAGLVWFLL-SKLWD 176

                 ....*.
gi 257467527 264 VLSGKF 269
Cdd:cd17390  177 LLLVRF 182
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
124-463 4.27e-04

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 42.92  E-value: 4.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 124 MAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISG--ISLSTIILNVEw 201
Cdd:COG0738   47 LLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGLGLldVAANPYVAALG- 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 202 VPTSTRAISSTTIgyCYTIGQFILPGLAYAV------PQWRWLQLSVSAAFFIFSLLSWWVPesirwlvlsgkfskalkt 275
Cdd:COG0738  126 PETAASRLNLLHA--FFSLGALLGPLLGGLLillglsLSWHLPYLILAVLLLLLALLFLRSK------------------ 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 276 lqrvatFNGKKEEGEKLTVEELKFnlqkditsakvkyglSDLFRvsilRRVTFCLSLAWFATGFAYYSLA-----MGVEE 350
Cdd:COG0738  186 ------LPEIEEEEEEAAGSAASL---------------KSLLK----NPRLLLGGLAIFLYVGAEGAIGdwlplYLKDV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 351 FGVN----IYILQIIFGGVdIPAKFITILSISYLGRRITQGFLLILAGVAILALIFVSSEMQLLrTALAVFGkGCLSGSF 426
Cdd:COG0738  241 LGLSeataALGLSLFWGGM-TIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLALLAPGPWLAL-IGLALVG-LGLSLMF 317
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 257467527 427 SCLFLYTSELYPTvLRQTGMGISNIWARVGSMIAPLV 463
Cdd:COG0738  318 PTIFSLALDGLGK-RTAAAVSAVLIMGIVGGAIGPPL 353
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
319-493 4.42e-04

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 42.56  E-value: 4.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 319 RVSILRRVTFCLSLAWFA-TGFAYYSLAMGvEEFGVN------IYILQIIFGGV-DIPAKFITilsiSYLGRRITQGFLL 390
Cdd:COG2223    3 RWRVLLLATLAFFLAFGVwYLWSVLAPPLA-EEFGLSaaqlglLFAIPVLVGALlRIPLGFLV----DRFGPRRVLLIGL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 391 ILAGVAILALIFVSSEMQLLrtALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV--KITGE 468
Cdd:COG2223   78 LLLGIGLLLLALAVSYWLLL--LLGLLLGIGGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLapLLIAA 155
                        170       180
                 ....*....|....*....|....*
gi 257467527 469 LQPFIPNVIFGTMTLLGGSAAFFLL 493
Cdd:COG2223  156 FGWRNAFLILGILLLVVAVLAWLFL 180
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
127-418 5.97e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 42.15  E-value: 5.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:cd17324   41 SAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEK 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAISsttIGYcYTIGQFIlpGLAYAVPQWRWL--QLSVSAAFFIFSLLSwwvpesirwLVLSGKFSKALKTLQRVATfng 284
Cdd:cd17324  121 RGRA---IGL-VFSGLTL--GLVLGRPLGGLLgqLLGWRAAFLAIAVLA---------LLAALLLWRLLPSLPPKKP--- 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 285 kkeegekltveelkfnlqkdiTSAKVKYGLSDLFRVSILRRVtFCLSLAWFATGFAYYS----LAMGVEEFGVNIYILQI 360
Cdd:cd17324  183 ---------------------GSLGLLSSLLLLLRNPRLRLA-YLITFLLFGGFFALYTylapFLTDVPGFSSSAIIGLL 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 257467527 361 IFGGVdipAKFITILSISYLGRRITQGFLLILAG---VAILALIFVSSEMQLLRTALAVFG 418
Cdd:cd17324  241 LLFGV---AGVVGSPLAGRLADRGGRRALLIALLllaAALLLLTLLGPSPLLLLVGLVLWG 298
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
138-266 6.43e-04

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 42.26  E-value: 6.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 138 PVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIIlnVEWVPTS-TRAISSTTIGY 216
Cdd:cd17389   82 PITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVSLSTAI--VADVTSPkKRSKGMALIGV 159
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 257467527 217 C----YTIGQFILPGLA----------YAVPQWRWLQLSVSAAFFIFSLLSWWVPESIRWLVLS 266
Cdd:cd17389  160 AfslgFIIGPMIGAYFAsftrslgevfFSMPALFALVLALADLLFIFFFLPETLPSNLRRLGLV 223
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
127-492 1.21e-03

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 41.40  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 127 SVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLSTIILNVEWVPTST 206
Cdd:cd17319   45 SAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPARE 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 207 RAISSTTigycYTIGQFIlpGLAYAVPQWRWLQLSVS--AAFFIFSLLSwwvpesIRWLVLsgkfskALKTLQRVatfng 284
Cdd:cd17319  125 RGRATGL----FNSGAPL--GAAIGPPLSGWLLLLFGwrWAFIIEGLLG------LLLAVL------WWFYLRQV----- 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 285 kkeegekltveeLKFNLqkditsakvkyglsdlfrvsilrrVTFCLSLAWFatGFAYYSLAMGVEEFGVNI----YILQI 360
Cdd:cd17319  182 ------------WGLAL------------------------GYFGINYALY--GLLTWLPTYLKQARGFSLkqvgLLAAI 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 361 IFGGVDIPAKFITILS--ISYLGRRITQGFLLILAGVAILALIFVSSE-MQLLRTALAVFGKGCLSGSFsclFLYTSELY 437
Cdd:cd17319  224 PFLAGAIGMILGGRLSdrLLRGARRLVIIIGLLLAAVGLLLAYLTTSPvVAVILLSLAGFGIGAASPVF---WSLPADLL 300
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 438 PTVLRQTGMGISNIWARVGSMIAP-----LVKITGELQPFIpnVIFGTMTLLGGSAAFFL 492
Cdd:cd17319  301 PGEAAATAGGLINSGGNLGGFVAPlligyLVDATGSYTAAF--LFLAAVALLAALLVLLL 358
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
123-194 2.60e-03

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 40.06  E-value: 2.60e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 257467527  123 EMAQSVFMAGILVGGPVFGELSDRFGRKPILTWSYLLLAASGSSAAFSPSLTVYMIFRFLCGCSISGISLST 194
Cdd:TIGR00710  43 QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVIS 114
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
389-463 2.88e-03

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 40.33  E-value: 2.88e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 257467527 389 LLILAG-VAILALIFVSSEMQLLrtALAVFGKG-CLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLV 463
Cdd:PRK11551 289 LLIYAGiLASLAALAAAPSFAGM--LLAGFAAGlFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLL 363
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
324-503 5.37e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 39.19  E-value: 5.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 324 RRVTFCLSLAWFATGFAYYSLAMGV----EEFGVNIYILQIIFGGVDIPAKFITILS---ISYLGRRITQGFLLILAGVA 396
Cdd:COG2814    9 WLALLALALGAFLSGLGIGIVLPALpliaADLGASPAQAGLVVTAYLLGAALGAPLAgrlADRFGRRRVLLLGLLLFALG 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257467527 397 ILALIFVSSEMQLLrtALAVFGKGCLSGSFSCLFLYTSELYPTVLRQTGMGISNIWARVGSMIAPLVkITGELQPFIPNV 476
Cdd:COG2814   89 SLLCALAPSLWLLL--AARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLL-GGLLADLFGWRW 165
                        170       180
                 ....*....|....*....|....*..
gi 257467527 477 IFGTMTLLGGSAAFFLLETLNRPLPET 503
Cdd:COG2814  166 VFLVNAVLALLALLLLLRLLPESRPAA 192
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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