|
Name |
Accession |
Description |
Interval |
E-value |
| Amidase |
pfam01425 |
Amidase; |
100-502 |
1.11e-50 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 179.42 E-value: 1.11e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 100 EAFQTAQDTDTLWYNSEEKPPLYGIPFSIK--CD--------GESGLANSP------ITTHLRNLGAIPFVTTSISK--- 160
Cdd:pfam01425 27 EALAQAAAADKQRAAGDPKGPLHGVPIAVKdnIDvkgvpttaGSKALENYPapydatVVERLRKAGAVILGKTNMDEfam 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 161 ---TPHP-----RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPTRDRFHVSGSNSY-- 230
Cdd:pfam01425 107 gssTENSvfgptRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDT-GGSIRIPASFCGLVGLKPTYGRVSRYGVVGYas 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 231 -----GFYTKNVQDQVFLLKLFIGSAGYRglePMSSPAPLMDL-----KLENKLKIGWFEDDGFNAPVPSNRRAVVDTIG 300
Cdd:pfam01425 186 sldqvGPLARSVEDAALLLRVISGYDPKD---STSLPPPVPDYaepvkKSLKGLRIGVYREDGYFDLDPEVRRAVEEALA 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 301 LLEKQGYEVVKFEMEDifPPFQVAqmFFKTQRPVDsnFIPNLYKSNSQCLGRFGKFLNFPKLVARI------------SK 368
Cdd:pfam01425 263 QLEALGHEVVEVDPPS--LDYALP--LYYLIAPAE--ASSNLARYDGVPSGPDDLSELYPRTRAEGlgdevkrriilgNY 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 369 RAAVISQSSNMKEMCKNL-EDIESYKLKFIEYwkslgvDVLICPAFCIPAvpekylPELVNTRLS-TGLFNMLDFPAGIV 446
Cdd:pfam01425 337 ALSAGYYDKYYLKAQKVRrLIRREFAGLFEEL------DVLLSPTAPTPA------PRLGEPDDSpLVMYNLDDFTAGVV 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 32565337 447 PAGhvtaddVANLEDEKIfpiddallrkqrDACVNSEAMPNSVQIVGLPNEEETVL 502
Cdd:pfam01425 405 PVN------LAGLPAISL------------PAGFTADGLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
54-513 |
1.26e-40 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 152.61 E-value: 1.26e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 54 VDLdLQSLIDKLQAKDG-LNAYTVLCAyarrmldcqtrldcvagvvMEAFQTAQDTDTLWYNSEEKPPLYGIPFSIKcD- 131
Cdd:COG0154 24 VEL-VEAALARIEAVNPaLNAFVTVDA-------------------ERALAEARAADARRAAGEALGPLAGVPVAVK-Dl 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 132 ----------GESGLAN------SPITTHLRNLGAIP--------FVTTSISKTPH---PRNPWALDCSPGGLCGGEAAL 184
Cdd:COG0154 83 idvaglpttaGSKALADfvppydATVVARLRAAGAVIlgktnmpeFAMGGSTENSAygpTRNPWDPDRTPGGSSGGSAAA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 185 VADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPTRDRF----HVSGSNSY---GFYTKNVQDQVFLLKLFigsAGYRGLE 257
Cdd:COG0154 163 VAAGLVPLALGSDT-GGSIRIPAAFCGLVGLKPTYGRVsrygVVPLASSLdqvGPLARTVADAALLLDVL---AGPDPRD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 258 PMSSPAPLMDLKLE-----NKLKIGWFEDDGFNAPV-PSNRRAVVDTIGLLEKQGYEVVKFEmediFPPFQVAQMFFKTQ 331
Cdd:COG0154 239 PTSAPAPVPDYLAAldrdlKGLRIGVPREYFGGDGVdPEVAAAVEAAAAALEALGAEVVEVD----LPDLDEALAAYYTI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 332 RPVD-SNFIPNLYKSNSQCLGRfgkflnfpkLVARISKRAAVISqssnMKEMCKNLEDIESYKLKFIEYWKslGVDVLIC 410
Cdd:COG0154 315 AAAEaAANLADLLRTRPEGFGP---------EVRRRILLGAYYS----AADYLKAQRVRALLRRDFAAAFE--DYDVLLT 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 411 PAFCIPAVP--EKYL---PELVNTRLS---TGLFNMLDFPAGIVPAGhvtaddvanledekifpiddallrkqrdacVNS 482
Cdd:COG0154 380 PTTPTPAPPigELDAdidPALAMNYLLdrfTAPANLAGLPALSVPAG------------------------------FTA 429
|
490 500 510
....*....|....*....|....*....|.
gi 32565337 483 EAMPNSVQIVGLPNEEETVLEVMKIVENLHG 513
Cdd:COG0154 430 DGLPVGLQLIGPPGDEATLLRLAAALEQALG 460
|
|
| PRK12470 |
PRK12470 |
amidase; Provisional |
64-516 |
1.54e-23 |
|
amidase; Provisional
Pssm-ID: 171524 [Multi-domain] Cd Length: 462 Bit Score: 103.42 E-value: 1.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 64 KLQAKDGLNAYTVLCAYARRMLDCQTRLDCVAGVVM-EAFQTAQDTDTLwYNSEEKPPLYGIPFSIKCD----GE----S 134
Cdd:PRK12470 16 RMLADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFdRARAEAEAAQQR-LDAGERLPLLGVPIAIKDDvdvaGEvttyG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 135 GLANSPITT-------HLRNLGAIpfvttSISKTPHP----------------RNPWALDCSPGGLCGGEAALVADGGAP 191
Cdd:PRK12470 95 SAGHGPAATsdaevvrRLRAAGAV-----IIGKTNVPelmimpfteslafgatRNPWDPNRTPGGSSGGSAAAVAAGLAP 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 192 FGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVS-------GSNSYGFYTKNVQDQVFLLKLFIGSAGYRGlePMSSPAP 264
Cdd:PRK12470 170 VALGSD-GGGSIRIPSTWCGLFGLKPQRDRISLEphdgawqGLSVNGPIARSVMDAALLLDATTTVPGPEG--EFVAAAA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 265 lmdlKLENKLKIGWFEDDGFNAPV---PSNRRAVVDTIGLLEKQGYEVVKFEMEdiFPPFQVA----QMFFKTQRPVDSN 337
Cdd:PRK12470 247 ----REPGRLRIALSTRVPTPLPVrcgKQELAAVHQAGALLRDLGHDVVVRDPD--YPAATYAnylpRFFRGISDDADAQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 338 FIPNLYKSNSQCLGRFGKFLNfPKLVARISKRAAVISQSSNmkemcKNLEDiesyklkfieywkslgVDVLICPAfcIPA 417
Cdd:PRK12470 321 AHPDRLEARTRAIARLGSFFS-DRRMAALRAAEVVLSARIQ-----SIFDD----------------VDVVVTPG--TAT 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 418 VPEKY----LPELVNTRLSTG-------LFNMLDFPAGIVPAGhvtaddvanledekifpiddallrkqrdacVNSEAMP 486
Cdd:PRK12470 377 GPSRIgayqRRGAVSTLLLVVqrvpyfqVWNLTGQPAAVVPWD------------------------------FDGDGLP 426
|
490 500 510
....*....|....*....|....*....|....*.
gi 32565337 487 NSVQIVGLPNEEETVLEVMKIVE------NLHGPMS 516
Cdd:PRK12470 427 MSVQLVGRPYDEATLLALAAQIEsarpwaHRRPPVS 462
|
|
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
113-511 |
9.69e-15 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 76.22 E-value: 9.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 113 YNSEEKPPLYGIPFSIK-----------CdGESGLAN--SP----ITTHLRNLGAIPFVTTSI------SKTPHP----- 164
Cdd:TIGR00132 48 LDKAILTPLAGIPIAVKdnistkgivttC-ASKILENyiPPydatVIERLKQAGALIIGKTNMdefamgSSTETSafgpt 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 165 RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSGSNSY-------GFYTKNV 237
Cdd:TIGR00132 127 KNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSD-TGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYassldqiGPFARTV 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 238 QDQVFLLKLFigsAGYRGLEPMSSPAPLMDLKLENK-----LKIGWFEDDGFNAPvPSNRRAVVDTIGLLEKQGYEVVKF 312
Cdd:TIGR00132 206 EDIALLLDVI---SGHDKRDSTSAKVPDPEFFEELKkdlkgLKVGVVKEFSEEMD-KEVQEKFENALEVLEELGAEIVEV 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 313 EmediFPPFQVAQMFFKTQRPvdSNFIPNLYKSNSQCLG-RFGKFLNFPKLVARIS--------KR----AAVISQSSNM 379
Cdd:TIGR00132 282 S----FPHVKYALPIYYIISP--SEASSNLARYDGIRYGyRIEEPNSLKELYAKTRaegfgeevKRrimlGNYALSAGYY 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 380 KEMCKNLEDIES-YKLKFIEYWKSlgVDVLICPAfcIPAVPEKyLPELVNTRLSTGLFNMLDFPAGIvpAGHvTADDVAN 458
Cdd:TIGR00132 356 DKYYLKAQKVRTlIIDDFLKLFEE--VDVIVSPT--APTLPFK-IGEKLDDPLEMYLSDILTVPANL--AGL-PAISVPC 427
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 32565337 459 LEDEKIFPIddallrkqrdacvnseampnSVQIVGLPNEEETVLEVMKIVENL 511
Cdd:TIGR00132 428 GVKEKGLPI--------------------GLQIIGKCFDDKTLLQVSYAFEQA 460
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Amidase |
pfam01425 |
Amidase; |
100-502 |
1.11e-50 |
|
Amidase;
Pssm-ID: 396144 [Multi-domain] Cd Length: 442 Bit Score: 179.42 E-value: 1.11e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 100 EAFQTAQDTDTLWYNSEEKPPLYGIPFSIK--CD--------GESGLANSP------ITTHLRNLGAIPFVTTSISK--- 160
Cdd:pfam01425 27 EALAQAAAADKQRAAGDPKGPLHGVPIAVKdnIDvkgvpttaGSKALENYPapydatVVERLRKAGAVILGKTNMDEfam 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 161 ---TPHP-----RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPTRDRFHVSGSNSY-- 230
Cdd:pfam01425 107 gssTENSvfgptRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDT-GGSIRIPASFCGLVGLKPTYGRVSRYGVVGYas 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 231 -----GFYTKNVQDQVFLLKLFIGSAGYRglePMSSPAPLMDL-----KLENKLKIGWFEDDGFNAPVPSNRRAVVDTIG 300
Cdd:pfam01425 186 sldqvGPLARSVEDAALLLRVISGYDPKD---STSLPPPVPDYaepvkKSLKGLRIGVYREDGYFDLDPEVRRAVEEALA 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 301 LLEKQGYEVVKFEMEDifPPFQVAqmFFKTQRPVDsnFIPNLYKSNSQCLGRFGKFLNFPKLVARI------------SK 368
Cdd:pfam01425 263 QLEALGHEVVEVDPPS--LDYALP--LYYLIAPAE--ASSNLARYDGVPSGPDDLSELYPRTRAEGlgdevkrriilgNY 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 369 RAAVISQSSNMKEMCKNL-EDIESYKLKFIEYwkslgvDVLICPAFCIPAvpekylPELVNTRLS-TGLFNMLDFPAGIV 446
Cdd:pfam01425 337 ALSAGYYDKYYLKAQKVRrLIRREFAGLFEEL------DVLLSPTAPTPA------PRLGEPDDSpLVMYNLDDFTAGVV 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 32565337 447 PAGhvtaddVANLEDEKIfpiddallrkqrDACVNSEAMPNSVQIVGLPNEEETVL 502
Cdd:pfam01425 405 PVN------LAGLPAISL------------PAGFTADGLPVGVQIIGKPGDEETLL 442
|
|
| GatA |
COG0154 |
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ... |
54-513 |
1.26e-40 |
|
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439924 [Multi-domain] Cd Length: 468 Bit Score: 152.61 E-value: 1.26e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 54 VDLdLQSLIDKLQAKDG-LNAYTVLCAyarrmldcqtrldcvagvvMEAFQTAQDTDTLWYNSEEKPPLYGIPFSIKcD- 131
Cdd:COG0154 24 VEL-VEAALARIEAVNPaLNAFVTVDA-------------------ERALAEARAADARRAAGEALGPLAGVPVAVK-Dl 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 132 ----------GESGLAN------SPITTHLRNLGAIP--------FVTTSISKTPH---PRNPWALDCSPGGLCGGEAAL 184
Cdd:COG0154 83 idvaglpttaGSKALADfvppydATVVARLRAAGAVIlgktnmpeFAMGGSTENSAygpTRNPWDPDRTPGGSSGGSAAA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 185 VADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPTRDRF----HVSGSNSY---GFYTKNVQDQVFLLKLFigsAGYRGLE 257
Cdd:COG0154 163 VAAGLVPLALGSDT-GGSIRIPAAFCGLVGLKPTYGRVsrygVVPLASSLdqvGPLARTVADAALLLDVL---AGPDPRD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 258 PMSSPAPLMDLKLE-----NKLKIGWFEDDGFNAPV-PSNRRAVVDTIGLLEKQGYEVVKFEmediFPPFQVAQMFFKTQ 331
Cdd:COG0154 239 PTSAPAPVPDYLAAldrdlKGLRIGVPREYFGGDGVdPEVAAAVEAAAAALEALGAEVVEVD----LPDLDEALAAYYTI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 332 RPVD-SNFIPNLYKSNSQCLGRfgkflnfpkLVARISKRAAVISqssnMKEMCKNLEDIESYKLKFIEYWKslGVDVLIC 410
Cdd:COG0154 315 AAAEaAANLADLLRTRPEGFGP---------EVRRRILLGAYYS----AADYLKAQRVRALLRRDFAAAFE--DYDVLLT 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 411 PAFCIPAVP--EKYL---PELVNTRLS---TGLFNMLDFPAGIVPAGhvtaddvanledekifpiddallrkqrdacVNS 482
Cdd:COG0154 380 PTTPTPAPPigELDAdidPALAMNYLLdrfTAPANLAGLPALSVPAG------------------------------FTA 429
|
490 500 510
....*....|....*....|....*....|.
gi 32565337 483 EAMPNSVQIVGLPNEEETVLEVMKIVENLHG 513
Cdd:COG0154 430 DGLPVGLQLIGPPGDEATLLRLAAALEQALG 460
|
|
| PRK12470 |
PRK12470 |
amidase; Provisional |
64-516 |
1.54e-23 |
|
amidase; Provisional
Pssm-ID: 171524 [Multi-domain] Cd Length: 462 Bit Score: 103.42 E-value: 1.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 64 KLQAKDGLNAYTVLCAYARRMLDCQTRLDCVAGVVM-EAFQTAQDTDTLwYNSEEKPPLYGIPFSIKCD----GE----S 134
Cdd:PRK12470 16 RMLADGELTAPMLLEVYLQRIERLDSHLRAYRVVLFdRARAEAEAAQQR-LDAGERLPLLGVPIAIKDDvdvaGEvttyG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 135 GLANSPITT-------HLRNLGAIpfvttSISKTPHP----------------RNPWALDCSPGGLCGGEAALVADGGAP 191
Cdd:PRK12470 95 SAGHGPAATsdaevvrRLRAAGAV-----IIGKTNVPelmimpfteslafgatRNPWDPNRTPGGSSGGSAAAVAAGLAP 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 192 FGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVS-------GSNSYGFYTKNVQDQVFLLKLFIGSAGYRGlePMSSPAP 264
Cdd:PRK12470 170 VALGSD-GGGSIRIPSTWCGLFGLKPQRDRISLEphdgawqGLSVNGPIARSVMDAALLLDATTTVPGPEG--EFVAAAA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 265 lmdlKLENKLKIGWFEDDGFNAPV---PSNRRAVVDTIGLLEKQGYEVVKFEMEdiFPPFQVA----QMFFKTQRPVDSN 337
Cdd:PRK12470 247 ----REPGRLRIALSTRVPTPLPVrcgKQELAAVHQAGALLRDLGHDVVVRDPD--YPAATYAnylpRFFRGISDDADAQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 338 FIPNLYKSNSQCLGRFGKFLNfPKLVARISKRAAVISQSSNmkemcKNLEDiesyklkfieywkslgVDVLICPAfcIPA 417
Cdd:PRK12470 321 AHPDRLEARTRAIARLGSFFS-DRRMAALRAAEVVLSARIQ-----SIFDD----------------VDVVVTPG--TAT 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 418 VPEKY----LPELVNTRLSTG-------LFNMLDFPAGIVPAGhvtaddvanledekifpiddallrkqrdacVNSEAMP 486
Cdd:PRK12470 377 GPSRIgayqRRGAVSTLLLVVqrvpyfqVWNLTGQPAAVVPWD------------------------------FDGDGLP 426
|
490 500 510
....*....|....*....|....*....|....*.
gi 32565337 487 NSVQIVGLPNEEETVLEVMKIVE------NLHGPMS 516
Cdd:PRK12470 427 MSVQLVGRPYDEATLLALAAQIEsarpwaHRRPPVS 462
|
|
| PRK07869 |
PRK07869 |
amidase; Provisional |
96-321 |
1.88e-18 |
|
amidase; Provisional
Pssm-ID: 181154 [Multi-domain] Cd Length: 468 Bit Score: 88.12 E-value: 1.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 96 GVVMEAFQTAQDTDTLwyNSEEKPPLYGIPFSIKCDGE-SGL---------------ANSPITTHLRNLGAIPFVTTSIS 159
Cdd:PRK07869 51 ALAYAAFDRARDRAAR--PGSQGGFFSGVPTFIKDNVDvAGLptmhgsdawtprpakADSDFARQFLATGLISLGKTQLP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 160 K------TPHP-----RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSGSN 228
Cdd:PRK07869 129 EfgfsasTEHPrlgpvRNPWNTDYSAGASSGGSAALVAAGVVPIAHAND-GGGSIRIPAACCGLVGLKPSRGRLPLDPEL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 229 SY--------GFYTKNVQDQVfllkLFIGSAG--YRGlePMSSPAPLMDLKLENKLKIGWFEDDGFNAPV-PSNRRAVVD 297
Cdd:PRK07869 208 RRlpvnivanGVLTRTVRDTA----AFYREAEryYRN--PKLPPIGDVTGPGKQRLRIAVVTDSVTGREAdPEVREAVLA 281
|
250 260
....*....|....*....|....
gi 32565337 298 TIGLLEKQGYEVvkfemEDIFPPF 321
Cdd:PRK07869 282 TARLLEELGHRV-----EPVDLPV 300
|
|
| PRK06061 |
PRK06061 |
amidase; Provisional |
117-310 |
7.64e-17 |
|
amidase; Provisional
Pssm-ID: 235686 [Multi-domain] Cd Length: 483 Bit Score: 83.21 E-value: 7.64e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 117 EKPPLYGIPFSIK-------------CDGE--SGLANSPITTHLRNLGAI-------------PFvtTSISKTPHPRNPW 168
Cdd:PRK06061 78 DRLPLLGVPIAVKddvdvagvptafgTAGEvpPATADSEVVRRLRAAGAVivgktntcelgqwPF--TSGPAFGHTRNPW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 169 ALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDR---------FHvsGSNSYGFYTKNVQD 239
Cdd:PRK06061 156 SRDHTPGGSSGGSAAAVAAGLVTAAIGSD-GAGSVRIPAAWTHLVGIKPQRGRistwplpeaFN--GLTVNGPLARTVAD 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 32565337 240 QVFLLKLFIGSAGyrglEPMSSPAPLMDL----KLENKLKIGW---FEDDGFNAPVPSNRRAVVDTIG-LLEKQGYEVV 310
Cdd:PRK06061 233 AALLLDAASGNHP----GDRHRPPPVTVSdavgRAPGPLRIALstrFPFTGFPAKLHPEIRAAVRRVAeQLALLGHTVV 307
|
|
| PRK07042 |
PRK07042 |
amidase; Provisional |
112-515 |
5.40e-16 |
|
amidase; Provisional
Pssm-ID: 235915 [Multi-domain] Cd Length: 464 Bit Score: 80.40 E-value: 5.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 112 WYNSEEKPPLYGIPFSIK----------------CDGESGLANSPITTHLRNLGAIPFVTTS------ISKTP---HP-- 164
Cdd:PRK07042 63 WAKGEPLGPLDGVPVTIKeniatrgvpvplgtaaTDLPPAAADAPPAARLREAGAVILAKTTmpdygmLSSGLssfHGlt 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 165 RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPTRDRFHVsgsNSY------GFYTKNVQ 238
Cdd:PRK07042 143 RNPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDI-GGSVRLPAGWCGIVGLKPSLGRIPI---DPPytgrcaGPMTRTVD 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 239 DQVFLLKlFIGSAGYRglEPMSSPAP---LMDLKLE-NKLKIGWFEDDGFNAPV-PSNRRAVVDTIGLLEKQGYEVVkfe 313
Cdd:PRK07042 219 DAALLMS-VLSRPDAR--DGTSLPPQdidWSDLDIDvRGLRIGLMLDAGCGLAVdPEVRAAVEAAARRFEAAGAIVE--- 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 314 medIFPPFQVAQM------FFKTQRPVDSNFIPNlyksnsqclGRFGKFLNFpklVARISKRAAVIS---------QSSN 378
Cdd:PRK07042 293 ---PVPPFLTRAMldgldrFWRARLWSDLAALPP---------ERRAKVLPY---IRRWAEGGADLSgveavrgfnQTFA 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 379 MKEMCKNLediesyklkFIEYwkslgvDVLICPAFCIPAVPEKyLPELVNTRLS-------TGLFNMLDFPAGIVPAGHv 451
Cdd:PRK07042 358 MRAAAARL---------FAEF------DYVLSPVAPVPAFPAE-WASPTNDPARpfehiafTVPWNMSEQPAASINCGF- 420
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 32565337 452 TADdvanledekifpiddallrkqrdacvnseAMPNSVQIVGLPNEEETVLEVMKIVENLHGPM 515
Cdd:PRK07042 421 TRD-----------------------------GLPIGLQIVGPRFDDLGVLRLAKAFEGWRGPQ 455
|
|
| gatA |
TIGR00132 |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ... |
113-511 |
9.69e-15 |
|
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272925 [Multi-domain] Cd Length: 460 Bit Score: 76.22 E-value: 9.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 113 YNSEEKPPLYGIPFSIK-----------CdGESGLAN--SP----ITTHLRNLGAIPFVTTSI------SKTPHP----- 164
Cdd:TIGR00132 48 LDKAILTPLAGIPIAVKdnistkgivttC-ASKILENyiPPydatVIERLKQAGALIIGKTNMdefamgSSTETSafgpt 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 165 RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSGSNSY-------GFYTKNV 237
Cdd:TIGR00132 127 KNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSD-TGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYassldqiGPFARTV 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 238 QDQVFLLKLFigsAGYRGLEPMSSPAPLMDLKLENK-----LKIGWFEDDGFNAPvPSNRRAVVDTIGLLEKQGYEVVKF 312
Cdd:TIGR00132 206 EDIALLLDVI---SGHDKRDSTSAKVPDPEFFEELKkdlkgLKVGVVKEFSEEMD-KEVQEKFENALEVLEELGAEIVEV 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 313 EmediFPPFQVAQMFFKTQRPvdSNFIPNLYKSNSQCLG-RFGKFLNFPKLVARIS--------KR----AAVISQSSNM 379
Cdd:TIGR00132 282 S----FPHVKYALPIYYIISP--SEASSNLARYDGIRYGyRIEEPNSLKELYAKTRaegfgeevKRrimlGNYALSAGYY 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 380 KEMCKNLEDIES-YKLKFIEYWKSlgVDVLICPAfcIPAVPEKyLPELVNTRLSTGLFNMLDFPAGIvpAGHvTADDVAN 458
Cdd:TIGR00132 356 DKYYLKAQKVRTlIIDDFLKLFEE--VDVIVSPT--APTLPFK-IGEKLDDPLEMYLSDILTVPANL--AGL-PAISVPC 427
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 32565337 459 LEDEKIFPIddallrkqrdacvnseampnSVQIVGLPNEEETVLEVMKIVENL 511
Cdd:TIGR00132 428 GVKEKGLPI--------------------GLQIIGKCFDDKTLLQVSYAFEQA 460
|
|
| PRK07488 |
PRK07488 |
indoleacetamide hydrolase; |
59-222 |
5.08e-14 |
|
indoleacetamide hydrolase;
Pssm-ID: 236030 [Multi-domain] Cd Length: 472 Bit Score: 74.24 E-value: 5.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 59 QSLIDKLQAKDGLNAYTVLCAyarrmldcqtrldcvagvvMEAFQTAQDTDTLwYNSEEKPPLYGIPFSIKCD------- 131
Cdd:PRK07488 32 EALLARAAALAPLNAFTTVDA-------------------EGALAAARRIDAQ-RAAGAALLLAGVPIVIKDNintagmp 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 132 ---GESGLAN------SPITTHLRNLGAIP----------FVTTSISKTPHP-RNPWALDCSPGGLCGGEAALVADGGAP 191
Cdd:PRK07488 92 ttaGTPALLGfvpatdAPVVQRLLDAGAVPlgkanmhelaFGITSNNGAFGAvRNPYDPARIAGGSSGGTAAAVAARLAP 171
|
170 180 190
....*....|....*....|....*....|.
gi 32565337 192 FGFAPDlDAGSLRIASAFCGLVTLKPTRDRF 222
Cdd:PRK07488 172 AGLGTD-TGGSVRIPAALCGVVGLRPTVGRY 201
|
|
| PRK06169 |
PRK06169 |
putative amidase; Provisional |
100-322 |
6.27e-14 |
|
putative amidase; Provisional
Pssm-ID: 180437 [Multi-domain] Cd Length: 466 Bit Score: 73.90 E-value: 6.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 100 EAFQTAQDTDTLWYNSEEKPPLYGIPFSIK---------------CDGESGLAN--SPITTHLRNLGAIpfvttSISKTP 162
Cdd:PRK06169 51 GALAAARASEERWRRGEPCGLLDGVPVSIKdifltrgwptlrgsrAIDADGPWDvdAPAVARLREAGAV-----LLGKTT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 163 HP----------------RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDR----- 221
Cdd:PRK06169 126 TPefgwkgvtdsplygitRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTD-GGGSVRIPASFCGTFGFKPTFGRvplyp 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 222 -------FHVsgsnsyGFYTKNVQDQVFLLKLfIGSAGYR---GLEPMSSP---APLMDLKlenKLKIGWFEDDGFNAPV 288
Cdd:PRK06169 205 aspfgtlAHV------GPMTRTVADAALLLDV-IARPDARdwsALPPPTTSfldALDRDVR---GLRIAYSPTLGYVDVD 274
|
250 260 270
....*....|....*....|....*....|....
gi 32565337 289 PSNRRAVVDTIGLLEKQGYEVvkfemEDIFPPFQ 322
Cdd:PRK06169 275 PEVAALVAQAVQRLAALGARV-----EEVDPGFS 303
|
|
| PRK09201 |
PRK09201 |
AtzE family amidohydrolase; |
51-227 |
7.56e-13 |
|
AtzE family amidohydrolase;
Pssm-ID: 236409 [Multi-domain] Cd Length: 465 Bit Score: 70.38 E-value: 7.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 51 RAVVDldlQSLIDKLQAKDGLNAYTVLCAyaRRMLdcqtrldcvagvvmeafQTAQDTDTLWYNSEEKPPLYGIPFSIK- 129
Cdd:PRK09201 24 RAVAQ---ATLARIARANPQLNAFTAVTA--ERAL-----------------AEAARIDAARAAGEPLGPLAGVPFAVKn 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 130 ---CDGESGLANSPI-------------TTHLRNLGAIP------------FVTTSISKTPhPRNPWALDCSPGGLCGGE 181
Cdd:PRK09201 82 lfdVAGLTTLAGSKInrdrppatrdataVRRLEAAGAVLvgalnmdeyaygFTTENSHYGA-TRNPHDLTRIAGGSSGGS 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 32565337 182 AALVADGGAPFGFAPDLDaGSLRIASAFCGLVTLKPTRDRFHVSGS 227
Cdd:PRK09201 161 AAAVAAGLVPFTLGSDTN-GSIRVPASLCGIFGLKPTYGRLSRAGS 205
|
|
| PRK07056 |
PRK07056 |
amidase; Provisional |
120-326 |
7.87e-13 |
|
amidase; Provisional
Pssm-ID: 235921 [Multi-domain] Cd Length: 454 Bit Score: 70.35 E-value: 7.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 120 PLYGIPFSIK----------CDGESGLANSPITTH-------LRNLGAIPFVTTSISK--------TPH---PRNPWALD 171
Cdd:PRK07056 71 PLAGIPVSVKdlfdvagqvtRAGSRVLADAPPAAAdapavarLRRAGAVLIGRTNMTEfafsglglNPHygtPRNPWRRD 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 172 CS----PGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSGS-------NSYGFYTKNVQDQ 240
Cdd:PRK07056 151 VGdgriPGGSSSGAAVSVADGMAAAALGTD-TGGSIRIPAALCGLTGFKPTARRVPLQGAvplsttlDSIGPLARSVACC 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 241 VFLLKLFigsAGYRGLEPmsSPAPLMDLKLenkLKIGWFEDDGFNAPVpsnRRAVVDTIGLLEKQGYEVVKFEmediFPP 320
Cdd:PRK07056 230 ALVDAVL---AGEEPVVP--AARPLEGLRL---AVPTTVVLDGLDATV---AAAFERALKRLSAAGAIIEEIA----FPE 294
|
....*..
gi 32565337 321 F-QVAQM 326
Cdd:PRK07056 295 LaELAEI 301
|
|
| PRK06529 |
PRK06529 |
amidase; Provisional |
100-313 |
1.99e-12 |
|
amidase; Provisional
Pssm-ID: 180608 [Multi-domain] Cd Length: 482 Bit Score: 69.46 E-value: 1.99e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 100 EAFQTAQDTDtlwynsEEKPPLYGIPFSIKCDGE--------SG---LANSPIT---THLRNLGAIPFVTTSISKTP--- 162
Cdd:PRK06529 48 EALEEAKQRD------FSGKPFAGVPIFLKDLGQelkgqlstSGsrlFKNYQATktdLYVKRLEDLGFIILGRSNTPefg 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 163 ------------------HPRNPwaldcspGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHV 224
Cdd:PRK06529 122 fknisdsslhgpvnlpfdNSRNA-------GGSSGGAAALVSSGIVALAAASD-GGGSIRIPASFNGLIGLKPSRGRIPV 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 225 sGSNSYGFY---------TKNVQDQVFLLKlfigsagYRGLEPMSSPAPLMDL-------KLENKLKIGWFEDDGFNAPV 288
Cdd:PRK06529 194 -GPGSYRGWqgasvhfalTKSVRDTRRLLY-------YLQMYQMESPFPLATLskeslfqSLQRPLKIAFYQRSPDGSPV 265
|
250 260
....*....|....*....|....*.
gi 32565337 289 PSN-RRAVVDTIGLLEKQGYEVVKFE 313
Cdd:PRK06529 266 SLDaAKALKQAVTFLREQGHEVVELE 291
|
|
| PRK07487 |
PRK07487 |
amidase; Provisional |
90-324 |
2.21e-11 |
|
amidase; Provisional
Pssm-ID: 236029 [Multi-domain] Cd Length: 469 Bit Score: 65.76 E-value: 2.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 90 RLDCV-----AGVVM---EAFQTAQDTDTLWYNSEEKPPLYGIPFSIKCD----GES---GL---------ANSPITTHL 145
Cdd:PRK07487 34 RLDAVnpainAVVDHrpeEALAQADAVDAARARGDDPGPLAGVPVTVKVNvdqaGFAttnGVrlqkdliapADSPVVDNL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 146 RNLGAIPFVTTSiskTP--------------HPRNPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFCG 211
Cdd:PRK07487 114 RKAGAVIIGRTN---TPafsyrwftdnplhgRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDI-GGSIRYPAYACG 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 212 LVTLKPTRDR---FHVSG---------SNSYGFYTKNVQDqvflLKLfigsagyrGLEPMSS---------PAPLMDLKL 270
Cdd:PRK07487 190 VHGLRPTLGRvpaYNASSperpigaqlMSVQGPLARTVAD----LRL--------ALAAMAApdprdpwwvPAPLEGPPR 257
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 32565337 271 ENKLKIgWFEDDGFnAPVPSNRRAVVDTIGLLEKQGYEVVkfEMEDIfPPFQVA 324
Cdd:PRK07487 258 PKRVAL-CVRPDGL-DVDPEVEAALRDAARRLEDAGWTVE--EVDDT-PPLREA 306
|
|
| PRK07235 |
PRK07235 |
amidase; Provisional |
159-309 |
3.33e-11 |
|
amidase; Provisional
Pssm-ID: 235979 [Multi-domain] Cd Length: 502 Bit Score: 65.41 E-value: 3.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 159 SKTPHP---RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTR-----------DRF-- 222
Cdd:PRK07235 150 SHTSDPgpvHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGD-QGGSIRIPSAWCGIYGMKPTHglvpytgafpiERTid 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 223 HVsgsnsyGFYTKNVQDQVFLLKLFIGSAGYRGLEPMSSPAP----LMDLKLENkLKIGWFEdDGFNAPV--PSNRRAVV 296
Cdd:PRK07235 229 HL------GPMTATVRDNALLLEVIAGRDGLDPRQPAQPPVDdytaALDRGVKG-LKIGILR-EGFGLPNsePEVDEAVR 300
|
170
....*....|...
gi 32565337 297 DTIGLLEKQGYEV 309
Cdd:PRK07235 301 AAAKRLEDLGATV 313
|
|
| PRK06102 |
PRK06102 |
amidase; |
162-322 |
2.34e-10 |
|
amidase;
Pssm-ID: 235698 [Multi-domain] Cd Length: 452 Bit Score: 62.74 E-value: 2.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 162 PH---PRNPWALDCS--PGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSGS-------NS 229
Cdd:PRK06102 136 PHygtPVNPRSTDVPriPGGSSSGSAVAVAAGLVPVAMGTD-TGGSVRIPAAFNGLVGYKATRGRYSMDGVfplakslDS 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 230 YGFYTKNVQDQVFLlklfigSAGYRGL-EPMSSPAPLMDLKL---ENKLkigwfeDDGFNAPVPSNRRAVVDtigLLEKQ 305
Cdd:PRK06102 215 LGPLCRSVRDAVWI------DAAMRGLtAPDVVRRPLAGLRLvvpETVV------FDDAEPGVRAAFEAAVE---RLQAA 279
|
170
....*....|....*..
gi 32565337 306 GyevVKFEMEdIFPPFQ 322
Cdd:PRK06102 280 G---ALVERQ-AFPAFQ 292
|
|
| PRK08186 |
PRK08186 |
allophanate hydrolase; Provisional |
120-326 |
2.86e-10 |
|
allophanate hydrolase; Provisional
Pssm-ID: 236177 [Multi-domain] Cd Length: 600 Bit Score: 62.55 E-value: 2.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 120 PLYGIPFSIK-------------CDGESGLA--NSPITTHLRNLGAIPfvttsISKT--------------PH--PRNPW 168
Cdd:PRK08186 68 PLYGVPFAVKdnidvaglpttaaCPAFAYTPerDATVVARLRAAGAIV-----IGKTnldqfatglvgtrsPYgaVRNAF 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 169 ALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSG----SNSY---GFYTKNVQDQV 241
Cdd:PRK08186 143 DPEYVSGGSSSGSAVAVALGLVSFALGTD-TAGSGRVPAAFNNIVGLKPTLGLLSTRGvvpaCRTLdcvSVFALTVDDAD 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 242 FLLKLfigSAGYRGLEPMSSPAP-LMDLKLENKLKIG--------WFEDdgfnapvPSNRRAVVDTIGLLEKQGYEVVKF 312
Cdd:PRK08186 222 AVLAV---MAGFDPADPYSRANPaDAPAALPAGPRVGvpraaqleFFGD-------AEAEAAFAAALARLEALGAELVEI 291
|
250
....*....|....
gi 32565337 313 emeDIFPPFQVAQM 326
Cdd:PRK08186 292 ---DFSPFLEAARL 302
|
|
| PRK06170 |
PRK06170 |
amidase; Provisional |
117-218 |
3.92e-10 |
|
amidase; Provisional
Pssm-ID: 235723 [Multi-domain] Cd Length: 490 Bit Score: 61.97 E-value: 3.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 117 EKPPLYGIPFSIKcdgES-GLANSPIT------------------THLRNLGAIPFvttsiSKTPHP------------- 164
Cdd:PRK06170 72 ERGPLLGIPVTVK---ESfNVAGLPTTwgfpdlrdyvpaedavavARLKAAGAVIL-----GKTNVPlglqdwqsyneiy 143
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 32565337 165 ---RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFCGLVTLKPT 218
Cdd:PRK06170 144 gttNNPWDLARTPGGSSGGSAAALAAGFGALSIGSDI-GGSLRVPAHYCGVYAHKPT 199
|
|
| PRK07486 |
PRK07486 |
amidase; Provisional |
53-281 |
2.70e-04 |
|
amidase; Provisional
Pssm-ID: 236028 [Multi-domain] Cd Length: 484 Bit Score: 43.46 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 53 VVDLDLQSLIDKLQAKDgLNAYTVLCAYarrmLDcqtRLDCVAGVVmEAFQTAQDTDTLWYNSEEK----------PPLY 122
Cdd:PRK07486 9 IVRLSAHALSRAIRRRQ-VSCVEVMRAY----LA---HIERVNPAV-NAIVALRDRDALLAEAAEKdaalargeyrGWLH 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 123 GIPFSIKcdgesGLAN---------SPITTH------------LRNLGAIpfvttSISKTPHP----------------R 165
Cdd:PRK07486 80 GMPQAPK-----DLAPtkgirttlgSPIFADqvpqedaivverMRAAGAI-----FIGKTNTPefglgshtynpvygatR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 166 NPWALDCSPGGLCGGEAALVADGGAPFGFAPDLdAGSLRIASAFC---------GLVTLKPTRDRFHVSGSNSyGFYTKN 236
Cdd:PRK07486 150 NPYDPSRSAGGSSGGAAAALALRMLPVADGSDM-MGSLRNPAAFNnvygfrpsqGRVPHGPGGDVFVQQLGTE-GPMGRT 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 32565337 237 VQDQVFLLKLfigSAGYRGLEPMS--SPAPLMDLKLENKLK---IGWFED 281
Cdd:PRK07486 228 VEDVALLLAV---QAGYDPRDPLSlaEDPARFAQPLEADLRgkrIAWLGD 274
|
|
| PLN02722 |
PLN02722 |
indole-3-acetamide amidohydrolase |
114-226 |
3.29e-04 |
|
indole-3-acetamide amidohydrolase
Pssm-ID: 166363 Cd Length: 422 Bit Score: 42.95 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 32565337 114 NSEEKPPLYGIPFSIK----CDGE-SGLANSP-ITTHLRNLGAIPFV-------TTSISKT-------------PH---P 164
Cdd:PLN02722 20 SSSHDLPLHGLTFAVKdifdVEGYvTGFGNPDwARTHSAATSTAPAVlavlrggATCVGKTimdemaysingenAHygtP 99
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 32565337 165 RNPWALDCSPGGLCGGEAALVADGGAPFGFAPDlDAGSLRIASAFCGLVTLKPTRDRFHVSG 226
Cdd:PLN02722 100 TNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTD-TGGSVRVPASYCGIFGFRPSHGAVSTVG 160
|
|
| |
