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Conserved domains on  [gi|71986535|ref|NP_502049|]
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Choline-specific glycerophosphodiester phosphodiesterase [Caenorhabditis elegans]

Protein Classification

nucleotide pyrophosphatase/phosphodiesterase family protein( domain architecture ID 12025720)

nucleotide pyrophosphatase/phosphodiesterase family protein catalyzes the cleavage of phosphodiester and phosphosulfate bonds in NAD, deoxynucleotides and/or nucleotide sugars; belongs to the alkaline phosphatase superfamily

CATH:  3.40.720.10
EC:  3.-.-.-
Gene Ontology:  GO:0016787

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
Phosphodiest pfam01663
Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of ...
26-341 1.12e-62

Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase i / nucleotide pyrophosphatase (nppase). These enzymes catalyze the cleavage of phosphodiester and phosphosulfate bonds in NAD, deoxynucleotides and nucleotide sugars. Also in this family is ATX an autotaxin, tumour cell motility-stimulating protein which exhibits type I phosphodiesterases activity. The alignment encompasses the active site. Also present with in this family is 60-kDa Ca2+-ATPase form F. odoratum.


:

Pssm-ID: 396300 [Multi-domain]  Cd Length: 343  Bit Score: 206.12  E-value: 1.12e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535    26 LAVVVIDGLAANTFYKFSHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGDYINNWKDNlKFQNFT 105
Cdd:pfam01663   1 LLVISLDGFRADYLDRFELTPNLAALAKEGVSAPNLTPVFPTLTFPNHYTLVTGLYPGSHGIVGNTFYDPKTG-EYLVFV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   106 ADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDW----DVAPQICVPPRTDGKTFaDESQAKRVIQ---------- 171
Cdd:pfam01663  80 ISDPEDPRWWQGEPIWDTAAKAGVRAAALFWPGSEVDYstyyGTPPRYLKDDYNNSVPF-EDRVDTAVLQtwldlpfadv 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   172 ATREHDLTLIYHPWIGEEIRRKGVHHtnEKHSKEVLRFAQSLERLTAQARER---VDLNVIVVSTHGFIDVPRKNIRVMD 248
Cdd:pfam01663 159 AAERPDLLLVYLEEPDYAGHRYGPDS--PEVEDALRRVDRAIGDLLEALDERglfEDTNVIVVSDHGMTPVSDDKVIFLN 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   249 EYVPMELIETTVGSGAIKQLQVK--------KGKTHQVYSQLHDHNP--IPNVHVYYTTPKSGNLPDHYHFkkSDIVADL 318
Cdd:pfam01663 237 DYLREKGLLHLVDGGPVVAIYPKarelghvpPGEVEEVYAELKEKLLglRIQDGEHLAVYLKEEIPGRLHY--NPRIPDL 314
                         330       340
                  ....*....|....*....|...
gi 71986535   319 VLLADPGYAVVTKDEKKQFPKPK 341
Cdd:pfam01663 315 VLVADPGWYITGKDGGDKEAAIH 337
 
Name Accession Description Interval E-value
Phosphodiest pfam01663
Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of ...
26-341 1.12e-62

Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase i / nucleotide pyrophosphatase (nppase). These enzymes catalyze the cleavage of phosphodiester and phosphosulfate bonds in NAD, deoxynucleotides and nucleotide sugars. Also in this family is ATX an autotaxin, tumour cell motility-stimulating protein which exhibits type I phosphodiesterases activity. The alignment encompasses the active site. Also present with in this family is 60-kDa Ca2+-ATPase form F. odoratum.


Pssm-ID: 396300 [Multi-domain]  Cd Length: 343  Bit Score: 206.12  E-value: 1.12e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535    26 LAVVVIDGLAANTFYKFSHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGDYINNWKDNlKFQNFT 105
Cdd:pfam01663   1 LLVISLDGFRADYLDRFELTPNLAALAKEGVSAPNLTPVFPTLTFPNHYTLVTGLYPGSHGIVGNTFYDPKTG-EYLVFV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   106 ADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDW----DVAPQICVPPRTDGKTFaDESQAKRVIQ---------- 171
Cdd:pfam01663  80 ISDPEDPRWWQGEPIWDTAAKAGVRAAALFWPGSEVDYstyyGTPPRYLKDDYNNSVPF-EDRVDTAVLQtwldlpfadv 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   172 ATREHDLTLIYHPWIGEEIRRKGVHHtnEKHSKEVLRFAQSLERLTAQARER---VDLNVIVVSTHGFIDVPRKNIRVMD 248
Cdd:pfam01663 159 AAERPDLLLVYLEEPDYAGHRYGPDS--PEVEDALRRVDRAIGDLLEALDERglfEDTNVIVVSDHGMTPVSDDKVIFLN 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   249 EYVPMELIETTVGSGAIKQLQVK--------KGKTHQVYSQLHDHNP--IPNVHVYYTTPKSGNLPDHYHFkkSDIVADL 318
Cdd:pfam01663 237 DYLREKGLLHLVDGGPVVAIYPKarelghvpPGEVEEVYAELKEKLLglRIQDGEHLAVYLKEEIPGRLHY--NPRIPDL 314
                         330       340
                  ....*....|....*....|...
gi 71986535   319 VLLADPGYAVVTKDEKKQFPKPK 341
Cdd:pfam01663 315 VLVADPGWYITGKDGGDKEAAIH 337
Enpp cd16018
Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide ...
24-392 4.35e-45

Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide pyrophosphatases/phosphodiesterases (ENPPs) hydrolyze 5'-phosphodiester bonds in nucleotides and their derivatives, resulting in the release of 5'-nucleotide monophosphates. ENPPs have multiple physiological roles, including nucleotide recycling, modulation of purinergic receptor signaling, regulation of extracellular pyrophosphate levels, stimulation of cell motility, and possible roles in regulation of insulin receptor (IR) signaling and activity of ecto-kinases. The eukaryotic ENPP family contains at least five members that have different tissue distribution and physiological roles.


Pssm-ID: 293742 [Multi-domain]  Cd Length: 267  Bit Score: 157.75  E-value: 4.35e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  24 QKLAVVVIDGLAANTFYKFSHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGDYINNWKDNLKFQN 103
Cdd:cd16018   1 PPLIVISIDGFRWDYLDRAGLTPNLKRLAEEGVRAKYVKPVFPTLTFPNHYSIVTGLYPESHGIVGNYFYDPKTNEEFSD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 104 ftADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDWDVAPQICVPPRTDGKTFADESQAKRVIQATREH------D 177
Cdd:cd16018  81 --SDWVWDPWWIGGEPIWVTAEKAGLKTASYFWPGSEVAIIGYNPTPIPLGGYWQPYNDSFPFEERVDTILEWldlerpD 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 178 LTLIYHPWIGEEIRRKGVHHtneKHSKEVLRFA-QSLERLTAQARER---VDLNVIVVSTHGFIDVprknirvmdeyvpm 253
Cdd:cd16018 159 LILLYFEEPDSAGHKYGPDS---PEVNEALKRVdRRLGYLIEALKERgllDDTNIIVVSDHGMTDV-------------- 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 254 eliettvgsgaikqlqvkkgKTHqvysqlhdhnpipnvhvyyttpksgnlpdhyhfkksdivadlvlladpgyavvtkde 333
Cdd:cd16018 222 --------------------GTH--------------------------------------------------------- 224
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 71986535 334 kkqfpkpklqeitaaidGYNNELPDVLGVFLGYGPAFRVGFRKGPIQLFDVYSLMCSLL 392
Cdd:cd16018 225 -----------------GYDNELPDMRAIFIARGPAFKKGKKLGPFRNVDIYPLMCNLL 266
AtaC COG1524
c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal ...
24-395 2.50e-30

c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal transduction mechanisms];


Pssm-ID: 441133 [Multi-domain]  Cd Length: 370  Bit Score: 120.62  E-value: 2.50e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  24 QKLAVVVIDGLAANTFYKFsHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGdyiNNWKD-----N 98
Cdd:COG1524  24 KKVVLILVDGLRADLLERA-HAPNLAALAARGVYARPLTSVFPSTTAPAHTTLLTGLYPGEHGIVG---NGWYDpelgrV 99
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  99 LKFQNFTADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDWDVAPQIcvPPRTDGKT------FADESQAKRVIQA 172
Cdd:COG1524 100 VNSLSWVEDGFGSNSLLPVPTIFERARAAGLTTAAVFWPSFEGSGLIDAAR--PYPYDGRKpllgnpAADRWIAAAALEL 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 173 TREH--DLTLIYHPWIGEEIRRKGVHHtnEKHSKEVLRFAQSLERLTAQARERVDL---NVIVVSTHGFIDVPRKnIRVm 247
Cdd:COG1524 178 LREGrpDLLLVYLPDLDYAGHRYGPDS--PEYRAALREVDAALGRLLDALKARGLYegtLVIVTADHGMVDVPPD-IDL- 253
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 248 DEYVPMELIETTVGSGAikQLQVKKGKTHQVYSQLHDHnpipnVHVYyttpkSGNLPDHYHFKKSDIvADLVLLADPGYA 327
Cdd:COG1524 254 NRLRLAGLLAVRAGESA--HLYLKDGADAEVRALLGLP-----ARVL-----TREELAAGHFGPHRI-GDLVLVAKPGWA 320
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 71986535 328 vvtkdekkqFPKPKLqeitaAIDGYNNElPDVLGVFLGYGPAFRVGFRkgpiqLFDVYSLMCSLLSIE 395
Cdd:COG1524 321 ---------LDAPLK-----GSHGGLPD-EEMRVPLLASGPGFRPGVR-----NVDVAPTIARLLGLP 368
 
Name Accession Description Interval E-value
Phosphodiest pfam01663
Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of ...
26-341 1.12e-62

Type I phosphodiesterase / nucleotide pyrophosphatase; This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase i / nucleotide pyrophosphatase (nppase). These enzymes catalyze the cleavage of phosphodiester and phosphosulfate bonds in NAD, deoxynucleotides and nucleotide sugars. Also in this family is ATX an autotaxin, tumour cell motility-stimulating protein which exhibits type I phosphodiesterases activity. The alignment encompasses the active site. Also present with in this family is 60-kDa Ca2+-ATPase form F. odoratum.


Pssm-ID: 396300 [Multi-domain]  Cd Length: 343  Bit Score: 206.12  E-value: 1.12e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535    26 LAVVVIDGLAANTFYKFSHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGDYINNWKDNlKFQNFT 105
Cdd:pfam01663   1 LLVISLDGFRADYLDRFELTPNLAALAKEGVSAPNLTPVFPTLTFPNHYTLVTGLYPGSHGIVGNTFYDPKTG-EYLVFV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   106 ADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDW----DVAPQICVPPRTDGKTFaDESQAKRVIQ---------- 171
Cdd:pfam01663  80 ISDPEDPRWWQGEPIWDTAAKAGVRAAALFWPGSEVDYstyyGTPPRYLKDDYNNSVPF-EDRVDTAVLQtwldlpfadv 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   172 ATREHDLTLIYHPWIGEEIRRKGVHHtnEKHSKEVLRFAQSLERLTAQARER---VDLNVIVVSTHGFIDVPRKNIRVMD 248
Cdd:pfam01663 159 AAERPDLLLVYLEEPDYAGHRYGPDS--PEVEDALRRVDRAIGDLLEALDERglfEDTNVIVVSDHGMTPVSDDKVIFLN 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535   249 EYVPMELIETTVGSGAIKQLQVK--------KGKTHQVYSQLHDHNP--IPNVHVYYTTPKSGNLPDHYHFkkSDIVADL 318
Cdd:pfam01663 237 DYLREKGLLHLVDGGPVVAIYPKarelghvpPGEVEEVYAELKEKLLglRIQDGEHLAVYLKEEIPGRLHY--NPRIPDL 314
                         330       340
                  ....*....|....*....|...
gi 71986535   319 VLLADPGYAVVTKDEKKQFPKPK 341
Cdd:pfam01663 315 VLVADPGWYITGKDGGDKEAAIH 337
Enpp cd16018
Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide ...
24-392 4.35e-45

Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin; Ecto-nucleotide pyrophosphatases/phosphodiesterases (ENPPs) hydrolyze 5'-phosphodiester bonds in nucleotides and their derivatives, resulting in the release of 5'-nucleotide monophosphates. ENPPs have multiple physiological roles, including nucleotide recycling, modulation of purinergic receptor signaling, regulation of extracellular pyrophosphate levels, stimulation of cell motility, and possible roles in regulation of insulin receptor (IR) signaling and activity of ecto-kinases. The eukaryotic ENPP family contains at least five members that have different tissue distribution and physiological roles.


Pssm-ID: 293742 [Multi-domain]  Cd Length: 267  Bit Score: 157.75  E-value: 4.35e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  24 QKLAVVVIDGLAANTFYKFSHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGDYINNWKDNLKFQN 103
Cdd:cd16018   1 PPLIVISIDGFRWDYLDRAGLTPNLKRLAEEGVRAKYVKPVFPTLTFPNHYSIVTGLYPESHGIVGNYFYDPKTNEEFSD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 104 ftADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDWDVAPQICVPPRTDGKTFADESQAKRVIQATREH------D 177
Cdd:cd16018  81 --SDWVWDPWWIGGEPIWVTAEKAGLKTASYFWPGSEVAIIGYNPTPIPLGGYWQPYNDSFPFEERVDTILEWldlerpD 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 178 LTLIYHPWIGEEIRRKGVHHtneKHSKEVLRFA-QSLERLTAQARER---VDLNVIVVSTHGFIDVprknirvmdeyvpm 253
Cdd:cd16018 159 LILLYFEEPDSAGHKYGPDS---PEVNEALKRVdRRLGYLIEALKERgllDDTNIIVVSDHGMTDV-------------- 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 254 eliettvgsgaikqlqvkkgKTHqvysqlhdhnpipnvhvyyttpksgnlpdhyhfkksdivadlvlladpgyavvtkde 333
Cdd:cd16018 222 --------------------GTH--------------------------------------------------------- 224
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 71986535 334 kkqfpkpklqeitaaidGYNNELPDVLGVFLGYGPAFRVGFRKGPIQLFDVYSLMCSLL 392
Cdd:cd16018 225 -----------------GYDNELPDMRAIFIARGPAFKKGKKLGPFRNVDIYPLMCNLL 266
AtaC COG1524
c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal ...
24-395 2.50e-30

c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily [Signal transduction mechanisms];


Pssm-ID: 441133 [Multi-domain]  Cd Length: 370  Bit Score: 120.62  E-value: 2.50e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  24 QKLAVVVIDGLAANTFYKFsHLSVFRTFEEEGVWSTKVFPVFPTFSISNRHSLLTGTLPRRHGIIGdyiNNWKD-----N 98
Cdd:COG1524  24 KKVVLILVDGLRADLLERA-HAPNLAALAARGVYARPLTSVFPSTTAPAHTTLLTGLYPGEHGIVG---NGWYDpelgrV 99
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  99 LKFQNFTADSDFSRDWWSIDPIYISALRSSASVAMFFFPECDVDWDVAPQIcvPPRTDGKT------FADESQAKRVIQA 172
Cdd:COG1524 100 VNSLSWVEDGFGSNSLLPVPTIFERARAAGLTTAAVFWPSFEGSGLIDAAR--PYPYDGRKpllgnpAADRWIAAAALEL 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 173 TREH--DLTLIYHPWIGEEIRRKGVHHtnEKHSKEVLRFAQSLERLTAQARERVDL---NVIVVSTHGFIDVPRKnIRVm 247
Cdd:COG1524 178 LREGrpDLLLVYLPDLDYAGHRYGPDS--PEYRAALREVDAALGRLLDALKARGLYegtLVIVTADHGMVDVPPD-IDL- 253
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535 248 DEYVPMELIETTVGSGAikQLQVKKGKTHQVYSQLHDHnpipnVHVYyttpkSGNLPDHYHFKKSDIvADLVLLADPGYA 327
Cdd:COG1524 254 NRLRLAGLLAVRAGESA--HLYLKDGADAEVRALLGLP-----ARVL-----TREELAAGHFGPHRI-GDLVLVAKPGWA 320
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 71986535 328 vvtkdekkqFPKPKLqeitaAIDGYNNElPDVLGVFLGYGPAFRVGFRkgpiqLFDVYSLMCSLLSIE 395
Cdd:COG1524 321 ---------LDAPLK-----GSHGGLPD-EEMRVPLLASGPGFRPGVR-----NVDVAPTIARLLGLP 368
AP-SPAP cd16016
SPAP is a subclass of alkaline phosphatase (AP); Alkaline phosphatases are non-specific ...
25-109 7.81e-07

SPAP is a subclass of alkaline phosphatase (AP); Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Although SPAP is a subclass of alkaline phosphatase, SPAP has many differences from other APs: 1) the catalytic residue is a threonine instead of serine, 2) there is no binding pocket for the third metal ion, and 3) the arginine residue forming bidentate hydrogen bonding is deleted in SPAP. A lysine and an asparagine residue, recruited together for the first time into the active site, bind the substrate phosphoryl group in a manner not observed before in any other AP.


Pssm-ID: 293740 [Multi-domain]  Cd Length: 457  Bit Score: 50.99  E-value: 7.81e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71986535  25 KLAV-VVIDGLAANTFYKFSHLSV---FRTFEEEGVWSTKV-FPVFPTFSISNRHSLLTGTLPRRHGIIGdyiNNWKDNL 99
Cdd:cd16016   3 KLVVgIVVDQMRADYLYRYRDRFGeggFKRLLNEGFVFENAhYNYAPTDTAPGHATIYTGTTPAIHGIIG---NDWYDRE 79
                        90
                ....*....|
gi 71986535 100 KFQNFTADSD 109
Cdd:cd16016  80 TGREVYCVED 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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