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Conserved domains on  [gi|17541762|ref|NP_502718|]
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UPF0375 protein R05A10.4 [Caenorhabditis elegans]

Protein Classification

DUF1505 domain-containing protein( domain architecture ID 10538402)

DUF1505 domain-containing protein similar to Caenorhabditis elegans UPF0375 protein ule-4

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1505 pfam07403
Protein of unknown function (DUF1505); This family consists of several uncharacterized ...
 1-110 3.85e-31

Protein of unknown function (DUF1505); This family consists of several uncharacterized Caenorhabditis elegans proteins of around 115 resides in length. Members of this family contain 6 highly conserved cysteine residues. The function of this family is unknown.


:

Pssm-ID: 369351  Cd Length: 114  Bit Score: 106.45  E-value: 3.85e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17541762     1 MNL-SIFSAIIFSITIASSaiPISENYVSWSSDSNCLDFDDSRDPNAVCEATTTWKRSENSSCIVSVYYVKK----EKSS 75
Cdd:pfam07403   1 MNFsTVLVLSVTVALVAGA--PISTSLSKASWSKECNDFLSDDYNGSRCTYTATWKVSTNSVCTVSTYYKKTvtyvEANE 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 17541762    76 GTSNGIPQCSKTPCDATEKIVVDCETAFREK-LANI 110
Cdd:pfam07403  79 DPLNGVAQCTKTPCDATEKIPVDCAVAFGEKyLAEI 114
 
Name Accession Description Interval E-value
DUF1505 pfam07403
Protein of unknown function (DUF1505); This family consists of several uncharacterized ...
 1-110 3.85e-31

Protein of unknown function (DUF1505); This family consists of several uncharacterized Caenorhabditis elegans proteins of around 115 resides in length. Members of this family contain 6 highly conserved cysteine residues. The function of this family is unknown.


Pssm-ID: 369351  Cd Length: 114  Bit Score: 106.45  E-value: 3.85e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17541762     1 MNL-SIFSAIIFSITIASSaiPISENYVSWSSDSNCLDFDDSRDPNAVCEATTTWKRSENSSCIVSVYYVKK----EKSS 75
Cdd:pfam07403   1 MNFsTVLVLSVTVALVAGA--PISTSLSKASWSKECNDFLSDDYNGSRCTYTATWKVSTNSVCTVSTYYKKTvtyvEANE 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 17541762    76 GTSNGIPQCSKTPCDATEKIVVDCETAFREK-LANI 110
Cdd:pfam07403  79 DPLNGVAQCTKTPCDATEKIPVDCAVAFGEKyLAEI 114
 
Name Accession Description Interval E-value
DUF1505 pfam07403
Protein of unknown function (DUF1505); This family consists of several uncharacterized ...
 1-110 3.85e-31

Protein of unknown function (DUF1505); This family consists of several uncharacterized Caenorhabditis elegans proteins of around 115 resides in length. Members of this family contain 6 highly conserved cysteine residues. The function of this family is unknown.


Pssm-ID: 369351  Cd Length: 114  Bit Score: 106.45  E-value: 3.85e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17541762     1 MNL-SIFSAIIFSITIASSaiPISENYVSWSSDSNCLDFDDSRDPNAVCEATTTWKRSENSSCIVSVYYVKK----EKSS 75
Cdd:pfam07403   1 MNFsTVLVLSVTVALVAGA--PISTSLSKASWSKECNDFLSDDYNGSRCTYTATWKVSTNSVCTVSTYYKKTvtyvEANE 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 17541762    76 GTSNGIPQCSKTPCDATEKIVVDCETAFREK-LANI 110
Cdd:pfam07403  79 DPLNGVAQCTKTPCDATEKIPVDCAVAFGEKyLAEI 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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