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Conserved domains on  [gi|17978459|ref|NP_536729|]
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ATP synthase subunit e, mitochondrial [Rattus norvegicus]

Protein Classification

ATP synthase subunit e( domain architecture ID 10529400)

mitochondrial ATP synthase subunit e is a component of mitochondrial membrane ATP synthase (F(1)F(o) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP-synt_E pfam05680
ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are ...
 2-35 6.37e-12

ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are components of the CF(0) subunit.


:

Pssm-ID: 368558  Cd Length: 83  Bit Score: 54.81  E-value: 6.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....
gi 17978459    2 VPPVQVSPLIKFGRYSALILGMAYGAKRYSYLKP 35
Cdd:pfam05680  1 MPPVAVSPLINVLRWSALAAGVVYGAKHQRSLKK 34
 
Name Accession Description Interval E-value
ATP-synt_E pfam05680
ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are ...
 2-35 6.37e-12

ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are components of the CF(0) subunit.


Pssm-ID: 368558  Cd Length: 83  Bit Score: 54.81  E-value: 6.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....
gi 17978459    2 VPPVQVSPLIKFGRYSALILGMAYGAKRYSYLKP 35
Cdd:pfam05680  1 MPPVAVSPLINVLRWSALAAGVVYGAKHQRSLKK 34
 
Name Accession Description Interval E-value
ATP-synt_E pfam05680
ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are ...
 2-35 6.37e-12

ATP synthase E chain; This family consists of several ATP synthase E chain sequences which are components of the CF(0) subunit.


Pssm-ID: 368558  Cd Length: 83  Bit Score: 54.81  E-value: 6.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....
gi 17978459    2 VPPVQVSPLIKFGRYSALILGMAYGAKRYSYLKP 35
Cdd:pfam05680  1 MPPVAVSPLINVLRWSALAAGVVYGAKHQRSLKK 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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