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Conserved domains on  [gi|121583727|ref|NP_667104|]
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olfactory receptor 1216 [Mus musculus]

Protein Classification

olfactory receptor family 4A protein( domain architecture ID 11610412)

olfactory receptor family 4A protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 6.77e-146

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 410.84  E-value: 6.77e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 121583727 263 AFSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 6.77e-146

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 410.84  E-value: 6.77e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 121583727 263 AFSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 7.36e-40

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.71  E-value: 7.36e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727   29 FLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILF-VIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  189 TDthIFVLLVFANSGAICIIIFS--LLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYArdTSAFS 265
Cdd:pfam13853 160 AD--IKVNNIYGLFVVTSTFGIDslLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSM--VHRFG 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 121583727  266 YEKDTLIFVN------VLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:pfam13853 236 HNVPPLLQIMmanaylFFPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 6.77e-146

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 410.84  E-value: 6.77e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15939    1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15939   80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15939  160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                        250       260
                 ....*....|....*....|....*...
gi 121583727 263 AFSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15939  240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
25-290 3.77e-123

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 353.43  E-value: 3.77e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15226    3 LFVFFSLFYVATVLGNLLIVVTVTSDPHLHS-PMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15226   82 FFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSAF 264
Cdd:cd15226  162 KLACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTF 241
                        250       260
                 ....*....|....*....|....*.
gi 121583727 265 SYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15226  242 PVDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-290 2.45e-110

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 320.97  E-value: 2.45e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd13954    2 LLFVLFLLIYLLTLLGNLLIILLVRLDSRL-HTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd13954  161 LKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTiLKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRN 290
Cdd:cd13954  241 SYSSDLDKVvsVFYTVVTPMLNPIIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
24-297 1.62e-108

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 316.70  E-value: 1.62e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15225    2 LLFVVFLLIYLVTLLGNLLIILITKVDPAL-HTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15225   81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15225  161 LKLACADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTiLKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 263 AFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15225  241 SYSPETDKLLslFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
25-290 4.83e-107

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 312.35  E-value: 4.83e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15936    3 LFLVFLLVYLTTWLGNLLIIITVISDPHL-HTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15936   82 FTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSAF 264
Cdd:cd15936  162 KLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTF 241
                        250       260
                 ....*....|....*....|....*.
gi 121583727 265 SYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15936  242 PMDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
24-290 2.25e-105

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 308.28  E-value: 2.25e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15230    2 PLFVLFLLIYLITLVGNLGMIVLIRIDS-RLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15230   81 AVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15230  161 LKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITiLRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15230  241 SYSLDQDKVVsvFYTVVIPMLNPLIYSLRN 270
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
24-290 2.77e-100

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 295.50  E-value: 2.77e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15940    2 AFFMLFLVLYLLTLSGNILIMITIVMDPRL-HTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15940   81 HLFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15940  161 IKLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTS 240
                        250       260
                 ....*....|....*....|....*..
gi 121583727 264 FSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15940  241 FSEDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
9-299 8.10e-99

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 292.73  E-value: 8.10e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727   9 EFIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEK 88
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIV-LIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAEN 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  89 KTISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLC 168
Cdd:cd15943   80 KTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 169 GPNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVV 247
Cdd:cd15943  160 GSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAiLRIHSSEGRRKAFSTCASHLMAVT 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 121583727 248 LFLVPCILIYARDTSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15943  240 IFYGTTLFMYLRPSSSYSLDQDKVvsVFYTVVIPMLNPLIYSLRNKEVKDALRR 293
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
25-297 1.01e-98

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 291.86  E-value: 1.01e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15231    3 LFLIFLIIYLVTLLGNLLIITLVLLDSHL-HTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15231   82 SFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15231  162 KLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTiLKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 264 FSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15231  242 YSLDKDTLISVlySIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
25-290 5.79e-97

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 286.77  E-value: 5.79e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15938    3 LFALFLLAYTMVLVGNLLIMVTVRSDPKL-SSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15938   82 FVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVI 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRahSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSAF 264
Cdd:cd15938  162 KLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTILVTIR--STEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTF 239
                        250       260
                 ....*....|....*....|....*.
gi 121583727 265 SYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15938  240 PVDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
10-293 6.50e-97

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 287.68  E-value: 6.50e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  10 FIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK 89
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRL-HTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  90 TISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCG 169
Cdd:cd15408   80 VISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 170 PNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVL 248
Cdd:cd15408  160 SNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATiLRMRSAEGRHKAFSTCASHLTAVTL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 121583727 249 FLVPCILIYARDTSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15408  240 FYGSLAFMYLRPSSRYSLDLDKVasVFYTVVIPMLNPLIYSLRNKEV 286
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
24-290 3.73e-96

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 284.76  E-value: 3.73e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFsV 103
Cdd:cd15912    2 LLFLLLLLTYLLTLLGNLLII-TITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSF-F 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGA-EMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15912   80 YFFLGTtEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFAnsGAICIIIFSLLL--VSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYAR 259
Cdd:cd15912  160 LLKLSCSDTRLIELLDFI--LASVVLLGSLLLtiVSYIYIISTiLRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVR 237
                        250       260       270
                 ....*....|....*....|....*....|...
gi 121583727 260 --DTSAFSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15912  238 psQSSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
24-290 4.94e-94

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 279.34  E-value: 4.94e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15935    2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15935   82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15935  162 IKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSS 241
                        250       260
                 ....*....|....*....|....*..
gi 121583727 264 FSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15935  242 SSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
10-300 7.25e-94

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 279.93  E-value: 7.25e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  10 FIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK 89
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKL-HTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  90 TISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCG 169
Cdd:cd15410   80 AISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 170 PNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVL 248
Cdd:cd15410  160 SNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTiLRIRSAEGRQKAFSTCASHLTAITI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 121583727 249 FLVPCILIYARDTSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:cd15410  240 FHGTILFMYCRPSSSYSLDTDKVasVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
23-290 1.25e-93

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 278.39  E-value: 1.25e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15237    1 ILLFILFLLIYLLTLLGNGLIILLIWLDSRL-HTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15237   80 FLALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15237  160 VLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATiLRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPH 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15237  240 STHSPDQDKMIsvFYTIVTPMLNPLIYSLRN 270
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
24-290 1.26e-93

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 278.54  E-value: 1.26e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15937    2 LLFVLFLLFYLIILPGNILIILTIQGDPQL-GSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15937   81 HFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15937  161 IKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRS 240
                        250       260
                 ....*....|....*....|....*..
gi 121583727 264 FSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15937  241 FPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
24-299 5.22e-93

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 277.37  E-value: 5.22e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15409    2 PLFLVFLAIYLITLVGNLGLIALIWKDSHL-HTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15409   81 GFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15409  161 LKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTiLKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15409  241 LYALDQDMMdsLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
22-297 7.38e-93

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 276.80  E-value: 7.38e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  22 EKILFVVFLLVYMATVGGNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLF 101
Cdd:cd15235    1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHT-PMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 SVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLF 181
Cdd:cd15235   80 FFIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQ 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 182 PLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARD 260
Cdd:cd15235  160 PLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAvLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 261 TSAFSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15235  240 SSSYSADKDRVATVmyTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
25-297 1.44e-92

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 276.01  E-value: 1.44e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15229    3 LFLVFLVIYLLTLLGNLLIMLVIRADSHL-HTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15229   82 FFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15229  162 PLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTiLRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSA 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 264 FSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15229  242 SSSVLDRVFSIqySILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
24-290 2.62e-91

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 272.44  E-value: 2.62e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15911    2 LLFLLFLVIYIVTMAGNILIIVLVVADRHL-HTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15911  161 LKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTiLRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPST 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYE--KDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15911  241 NTSRDlnKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
24-296 1.19e-89

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 268.65  E-value: 1.19e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15421    2 FLFSLILLIFLVALTGNALLIL-LIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15421   81 LTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15421  161 LKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTvLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 263 AFSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINA 296
Cdd:cd15421  241 YHSPEQDKVVSVfyTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
23-290 1.41e-89

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 268.33  E-value: 1.41e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIySPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15918    1 QLLFGLFLGMYLVTVLGNLLIILAIG-SDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15918   80 FLLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15918  160 LLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAvLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 262 SAFSYEKDTLIFV--NVLTPLLNPMVYTFRN 290
Cdd:cd15918  240 SSHSASKDSVAAVmyTVVTPMLNPFIYSLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
24-299 4.77e-89

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 267.20  E-value: 4.77e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15417    2 ILFVLFLGIYLVTLLWNLGLIILIRMDS-HLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15417   81 SGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANsgAICIIIFSLL--LVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARD 260
Cdd:cd15417  161 LSLSCSDTFISQVVLFLV--AVLFGVFSVLvvLISYGYIISTiLKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRP 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 121583727 261 TSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15417  239 SSSHSQDQDKVasVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
24-299 9.68e-89

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 266.54  E-value: 9.68e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15416    2 ILFVLFLVIYSVTLLGNLSIILLIRISSQL-HTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15416   81 ATFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15416  161 LKLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAiLRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15416  241 SYSMDQNKVvsVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
24-299 1.58e-88

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 265.72  E-value: 1.58e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15411    2 PLFVLFLVIYVITVMGNLGMIL-LIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15411   81 IALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15411  161 LKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTiLKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15411  241 SYSLGQDKVasVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
24-290 2.07e-88

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 265.32  E-value: 2.07e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15915    2 FLFVLFLLLYLASLLGNGAILAVVIAEPRL-HSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15915   81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSL--RAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15915  161 LKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLllKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPS 240
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 262 SAFSYEKD--TLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15915  241 SGDSLEQDriVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
25-296 4.02e-88

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 264.65  E-value: 4.02e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15429    3 LFVLFLVMYLLTLLGNFLIILLIRLDPRL-HTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15429   82 ALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15429  162 RLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAiLRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSG 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 121583727 264 FSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINA 296
Cdd:cd15429  242 SSALQEKMIslFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
24-290 1.71e-87

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 262.93  E-value: 1.71e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15431    2 ILFVLLLIVYLVTLLGNGLIILLIRVDSQL-HTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQViFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15431   81 LFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPV-LTMPLHFCGPNVINHFFCEVQAL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15431  160 LKLACSDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAvLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQS 239
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15431  240 KSSSDQDKIIsvFYGVVTPMLNPLIYSLRN 269
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
24-290 4.46e-87

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 261.81  E-value: 4.46e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15232    2 LLFWLFLFLYAAALTGNSLIILAISTSPKL-HTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15232   81 TWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15232  161 LLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSiLRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLIFV--NVLTPLLNPMVYTFRN 290
Cdd:cd15232  241 SYSPEKDKVVAVlySVVTPTLNPLIYSLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
25-297 7.26e-87

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 261.61  E-value: 7.26e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEK-KTISFGCCMTQLFSV 103
Cdd:cd15916    3 LFLIFLIIYLLTVLGNLLILLTVWVDSHL-HRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15916   82 HFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15916  162 LKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAiLRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGS 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 121583727 263 AFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15916  242 KEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
10-299 8.67e-87

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 261.99  E-value: 8.67e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  10 FIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK 89
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMII-LIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  90 TISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCG 169
Cdd:cd15945   80 SIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 170 PNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVL 248
Cdd:cd15945  160 SNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITvLKIRSAEGRFKAFSTCASHLTAVGL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121583727 249 FLVPCILIYARDTSAFSYEKD--TLIFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15945  240 FYGTLLFMYLRPSSSYSLDTDkmTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
26-290 1.03e-86

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 260.85  E-value: 1.03e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  26 FVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHF 105
Cdd:cd15227    4 FVLFLLIYLAALTGNLLIITVVTLDHHL-HTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLK 185
Cdd:cd15227   83 FAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 186 LACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVIlFS--LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15227  163 LSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHI-FStvLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSD 241
                        250       260
                 ....*....|....*....|....*....
gi 121583727 264 FSYEKDTL--IFVNVLTPLLNPMVYTFRN 290
Cdd:cd15227  242 SPSLLDLLlsVFYSVVPPTLNPIIYSLRN 270
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
24-299 1.93e-86

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 260.70  E-value: 1.93e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15419    2 LLFLLFLVIYMVTVLGN-IGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15419   81 SLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15419  161 LKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTiLRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15419  241 VSSPEQSKVvsVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
24-292 1.34e-85

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 258.13  E-value: 1.34e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15228    2 ILFVLFLAFYLCTLLGNLLILSAILSDPRL-HTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15228   81 HFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15228  161 LKLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISiLKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTP 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLIFVNVLTPLLNPMVYTFRNKE 292
Cdd:cd15228  241 SPVLVTPVQIFNNVVTPMLNPLIYTLRNKE 270
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
25-299 2.72e-85

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 257.73  E-value: 2.72e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15415    3 LFMLFLLIYFITLLGNLGMIVLIRINPQL-HTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15415   82 VFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15415  162 KLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAiLRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 121583727 264 FSY--EKDTLIFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15415  242 YSLeqEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
24-299 9.19e-85

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 256.48  E-value: 9.19e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15413    2 PLFGLFLVIYLTTVMGNLGMIILTRLDSRL-QTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15413   81 LTFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGaiCIIIFSLL--LVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARD 260
Cdd:cd15413  161 LALSCSDTHEKELIILIFAG--FNLISSLLivLVSYLFILSAiLRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQP 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 121583727 261 TSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15413  239 KSSHSLDTDKMasVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
25-293 1.48e-83

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 253.02  E-value: 1.48e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15420    3 LFGLFSLLYIFTLLGNGLILG-LIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15420   82 ALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15420  162 KLACADTWINEILIFAGCVFILLGPFSLILISYLHILAAiLKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSS 241
                        250       260       270
                 ....*....|....*....|....*....|..
gi 121583727 264 FSYEKDTLI--FVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15420  242 NSAEQEKILslFYSLFNPMLNPLIYSLRNKQV 273
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
14-300 1.08e-82

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 251.52  E-value: 1.08e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  14 GLSQNPKIEKILFVVFLLVYMATVGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISF 93
Cdd:cd15406    1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSS-QLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  94 GCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVI 173
Cdd:cd15406   80 PECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 174 DHYMCDLFPLLKLACTDTHIFVLLVFAnSGAICIIIFSL-LLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLV 251
Cdd:cd15406  160 NHYFCDILPLLKLSCSSTYINELLLFI-VGGFNVLATTLaILISYAFILSSiLRIRSAEGRSKAFSTCSSHLAAVGVFYG 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 121583727 252 PCILIYARDTSAFSY--EKDTLIFVNVLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:cd15406  239 SIIFMYLKPSSSSSMtqEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
23-290 1.16e-82

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 250.62  E-value: 1.16e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15947    1 MPLFVVVLIFYLLTLLGNTAIILLSLLDPRL-HTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15947   80 FLWLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15947  160 LIKLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAvLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPP 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15947  240 SSYSQDQGKFIslFYTVVTPTLNPLIYTLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
23-299 5.43e-82

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 249.24  E-value: 5.43e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15412    1 PLLFVLFLVIYLITLLGNLGMILLIRLDSRL-HTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15412   80 FIALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15412  160 LIKLSCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAiLRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPP 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15412  240 SEESVEQSKIVavFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
10-300 7.36e-81

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 247.01  E-value: 7.36e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  10 FIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVTIIYSpALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK 89
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTD-SQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  90 TISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCG 169
Cdd:cd15944   80 VISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 170 PNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVL 248
Cdd:cd15944  160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAiLRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 121583727 249 FLVPCILIYARDTSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:cd15944  240 FYGTVIFMYLRPTSVYSLDQDKWasVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
24-303 2.48e-80

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 245.41  E-value: 2.48e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15414    2 PLFLLFLLVYLITLLGNLGMIILIQVDSRL-HTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15414  161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAiLRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 121583727 263 AFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINAIRKMWKR 303
Cdd:cd15414  241 SSSLDLDKVVsvFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
25-290 6.41e-80

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 243.73  E-value: 6.41e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15224    3 LFLLFLIAYVLTLLENLLIILTIWLNSQL-HKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15224   82 SLACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFAnsGAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARD- 260
Cdd:cd15224  162 NLSCTDMSLAELVDFI--LALIILLVPLLVTvaSYICIISTvLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPk 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 261 -TSAFSYEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15224  240 aISSFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
25-297 1.74e-78

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 240.03  E-value: 1.74e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15942    3 LFLFFLVVYLLTLSGNSLIILVVISDLQL-HKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15942   82 FLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAML 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15942  162 KLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAiLKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQ 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 121583727 264 FSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15942  242 DPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
24-297 2.61e-78

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 239.64  E-value: 2.61e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15424    2 LLFVVILIIYLLTILGNLVII-ILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15424   81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIY--ARD 260
Cdd:cd15424  161 LKLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASvLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYmrPRS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 261 TSAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15424  241 GSTPDRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
23-297 8.42e-77

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 235.74  E-value: 8.42e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNM-IIVVTIIYSPalLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLF 101
Cdd:cd15434    1 KILSVVVLIFYLLTLVGNTtIILVSCLDSR--LHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 SVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLF 181
Cdd:cd15434   79 IALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 182 PLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARD 260
Cdd:cd15434  159 ALIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAvLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQP 238
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 261 TSAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15434  239 KNSVSQDQGKFltLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
24-290 1.23e-76

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 235.34  E-value: 1.23e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15914    2 LLFILLLLIYLFIITGNLLIF-TVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSY-GVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15914  161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYvKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSK 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLIFV--NVLTPLLNPMVYTFRN 290
Cdd:cd15914  241 SYSLDYDRAIAVvyAVLTPFFNPIIYSLRN 270
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
24-297 8.38e-76

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 233.59  E-value: 8.38e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLH-EKKTISFGCCMTQLFS 102
Cdd:cd15941    2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTlSGRTISFEGCVVQLYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15941   82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15941  162 VLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAvLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 262 SAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15941  242 SSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
24-299 1.49e-75

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 232.75  E-value: 1.49e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15418    3 ILFVVFLLSYILTLVGNLTLIA-LICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15418   82 AGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15418  162 VKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAiLRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 121583727 263 AFSYEKD--TLIFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15418  242 SHTPDRDkvVALFYTVVNPLLNPLIYSLRNKDVKEALKK 280
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
25-292 1.51e-73

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 227.68  E-value: 1.51e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15405    3 LFFLFLGIYVVTVVGNLGLITLICLNSHL-HTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFC 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15405   82 FFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15405  162 QLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNiLHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSV 241
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 264 FSYEKDTL--IFVNVLTPLLNPMVYTFRNKE 292
Cdd:cd15405  242 GSVNQGKVssVFYTNVVPMLNPLIYSLRNKD 272
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
23-290 1.59e-73

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 227.25  E-value: 1.59e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15430    1 ILLFVLCLIMYLVILLGNGVLIIITILDSHL-HTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15430   80 SLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15430  160 VLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTiLRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPK 239
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15430  240 SKNAQISDKLItlFYGVVTPMLNPIIYSLRN 270
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
23-297 6.47e-73

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 226.21  E-value: 6.47e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15432    1 MVLFVVFLIFYILTLLGNLAIILVSRLDPQL-HTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15432   80 FLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15432  160 LLKLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAvLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPP 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15432  240 SNSSHDRGKMValFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
24-297 1.16e-72

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 225.15  E-value: 1.16e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIySPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15234    2 LLFGLFLSMYLVTVLGNLLIILAVS-SDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15234   81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15234  161 LKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSiLRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSAV 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 263 AFSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15234  241 THSSRKTAVASVmyTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
24-290 1.76e-72

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 224.50  E-value: 1.76e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15913    2 LLFSFFSVIYILTLLGNGAII-CAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15913   81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYG-VILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15913  161 LALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTlVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFS--YEKDTLIFVNVLTPLLNPMVYTFRN 290
Cdd:cd15913  241 GNStgMQKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
24-297 4.55e-71

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 221.20  E-value: 4.55e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLD-ACVSSTVtPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15233    2 VLFVTFLLAYIVTIGGNLSILAAILLEPKL-HTPMYFFLGNLSLLDiGCISVTV-PQMLVHLLSHKRTISYAACLSQLFF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15233   80 FHLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYG-VILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15233  160 LFQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAhVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLG 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 121583727 262 SAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15233  240 SVYSSDKDKVigILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
25-297 6.90e-71

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 220.81  E-value: 6.90e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSpALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15428    3 LFILFLIIYLMTVLGNLLLVLLVIVD-SHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15428   82 SFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15428  162 KLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTvFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSS 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 264 FS--YEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15428  242 TSkeYDKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
24-290 1.41e-70

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 219.66  E-value: 1.41e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15946    2 ILFAVFLLIYLSILLGNGLII-TLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15946   81 LALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15946  161 LKLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAiLKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 121583727 263 AFSYEKDTLI--FVNVLTPLLNPMVYTFRN 290
Cdd:cd15946  241 NYSPERDKKIslFYNVFTALLNPVIYSLRN 270
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
25-299 2.75e-70

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 219.21  E-value: 2.75e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIiVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15407    3 LFIIFTLIYLITLVGNLG-MILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15407   82 VFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDTHIFVLLVFANSGaiCIIIFSLL--LVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15407  162 ALSCSDIHISEIVLFFLAS--FNVFFALLviLISYLFIFITiLRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPS 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 121583727 262 SAFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15407  240 SSHSMDTDKMasVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
24-297 5.08e-65

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 205.77  E-value: 5.08e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15236    2 VFFALFLAMYLTTVLGNLLIILLIRLDSHL-HTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPL 183
Cdd:cd15236   81 IFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTS 262
Cdd:cd15236  161 LKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATiLKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSS 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 263 AFSYEKDTL--IFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15236  241 NNSSDKDIVasVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
23-297 5.21e-65

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 205.80  E-value: 5.21e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15433    1 PVLFVVVLIFYLLTLVGNTIIILLSVRDLRL-HTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFP 182
Cdd:cd15433   80 SLALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDT 261
Cdd:cd15433  160 FLKLACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAvLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPI 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 121583727 262 SAFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15433  240 HRYSQAHGKFVslFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
25-297 1.32e-55

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 181.72  E-value: 1.32e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15223    3 LSLPFLLLYLVALVANSLLLL-IIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLL 184
Cdd:cd15223   82 FFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 KLACTDT---HIFVLLVfansgAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLF--LVPCILI 256
Cdd:cd15223  162 SLACGDTtinSIYGLAV-----AWLIVGSDIILIffSYALILRAvLRLASGEARSKALNTCGSHLIVILFFytAVLVSSL 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 121583727 257 YARDTSAFSYEKDTLIFV--NVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15223  237 TYRFGKTIPPDVHVLLSVlyILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-293 6.18e-53

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 174.49  E-value: 6.18e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15952    7 FCAVYLIALLGNCTILF-VIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:cd15952   86 MESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 TDTHIFVLLVFansGAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYArdTSAFS 265
Cdd:cd15952  166 ASIRINIIYGL---FAISVLVLDVILIalSYVLILRAvFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFL--THRFG 240
                        250       260       270
                 ....*....|....*....|....*....|....
gi 121583727 266 YEKDTLI------FVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15952  241 HNIPRYIhillanLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
27-293 1.21e-52

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 174.01  E-value: 1.21e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFF 106
Cdd:cd15917    5 IPFCAMYLVALLGNITILF-VIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 107 SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKL 186
Cdd:cd15917   84 TAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVVKL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 187 ACTDTHIFVllVFANSGAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSA 263
Cdd:cd15917  164 ACGDTRVNS--IYGLFVALLIVGFDLLFIalSYVLILRAvLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFG 241
                        250       260       270
                 ....*....|....*....|....*....|....
gi 121583727 264 FSYEKDTLIFVN----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15917  242 HHVPPHVHILLAnlylLLPPMLNPIVYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
29-293 5.47e-50

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 167.21  E-value: 5.47e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15950    7 FCSMYVIALLGNGTILLVIKLDPSL-HEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRR-LCSILVAISWAGGFLHAIVQVIFTlQLPLCGPNVIDHYMCDLFPLLKLA 187
Cdd:cd15950   86 VESGVLLAMAFDRYVAICHPLRYSAILTSQvIAQIGLAIVLRALLFMTPLTCLVT-SLPYCGSRVVPHSYCEHMAVVKLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 188 CTDTHifVLLVFANSGAICIIIFSLLL--VSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSAF 264
Cdd:cd15950  165 CADPR--PSSLYSITGSTLVVGTDSAFiaVSYGLILRAvLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRFGQ 242
                        250       260       270
                 ....*....|....*....|....*....|...
gi 121583727 265 SYEKDTLIFVN----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15950  243 GVPPHTQVLLAdlylLVPPMLNPIIYGMRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
29-292 3.06e-48

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 162.46  E-value: 3.06e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15221    7 FCSMYIVALLGNSLLLFVIVTERSL-HEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLhAIVQVIFTLQ-LPLCGPNVIDHYMCDLFPLLKLA 187
Cdd:cd15221   86 TESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFC-IVFPFVFLLKrLPYCGHNVIPHTYCEHMGIARLA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 188 CTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILiyardtSAFSY 266
Cdd:cd15221  165 CADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAvFRLPSKDARLKALSTCGSHVCVILMFYTPAFF------SFLTH 238
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 121583727 267 E------KDTLIFVN----VLTPLLNPMVYTFRNKE 292
Cdd:cd15221  239 RfgrhipRHVHILLAnlyvLVPPMLNPIVYGVKTKQ 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
25-292 5.14e-48

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 161.90  E-value: 5.14e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15222    3 ISIPFCLLYLVALLGNSTILFVIKTEPSL-HEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILT-RRLCSILVAISWAGGFLHAIVqVIFTLQLPLCGPNVIDHYMCdLFP- 182
Cdd:cd15222   82 TFSFMESSVLLAMAFDRFVAICNPLRYASILTnSRIAKIGLAIVLRSVLLLLPL-PFLLKRLPFCHSNVLSHSYC-LHQd 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 183 LLKLACTDTHIFVLLvfansgAICIIIFS------LLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCIL 255
Cdd:cd15222  160 VMKLACSDTRVNSIY------GLFVVLSTmgldslLILLSYVLILKTvLGIASREERLKALNTCVSHICAVLIFYVPMIG 233
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 121583727 256 I-----YARDTSAFSYekdtLIFVNV---LTPLLNPMVYTFRNKE 292
Cdd:cd15222  234 LsmvhrFGKHASPLVH----VLMANVyllVPPVLNPIIYSVKTKQ 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
29-292 2.42e-44

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 152.50  E-value: 2.42e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15951    7 FCIMYAVALLGNFTILFIVKTEPSL-HEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFST 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:cd15951   86 MESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 TDTHIFVLlvFANSGAICIIIFSLLL--VSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYArdTSAFS 265
Cdd:cd15951  166 ADTRVSRA--YGLSVAFLVGGLDVIFiaVSYIQILRAvFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFL--THRFG 241
                        250       260       270
                 ....*....|....*....|....*....|...
gi 121583727 266 YEKDTLIFVNV------LTPLLNPMVYTFRNKE 292
Cdd:cd15951  242 HNVPPHVHILIanvyllVPPMLNPIIYGVRTKQ 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
29-292 2.45e-41

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 144.71  E-value: 2.45e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15953    7 FCLMYIVTLLGNCTILFVVGKEQSL-HKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:cd15953   86 MESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 TDThiFVLLVFANSGAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILiyardtSAFS 265
Cdd:cd15953  166 GDT--TINRIYGLVVALLVVGLDLLLIalSYALIIRAvLRLSSKKARQKALNTCTAHICVILMSYTPALF------SFLT 237
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 266 YEKDT-------LIFVNV---LTPLLNPMVYTFRNKE 292
Cdd:cd15953  238 HRFGQgiaphihIILANLyllVPPMLNPIIYGVKTKE 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 7.36e-40

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 140.71  E-value: 7.36e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727   29 FLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILF-VIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  189 TDthIFVLLVFANSGAICIIIFS--LLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYArdTSAFS 265
Cdd:pfam13853 160 AD--IKVNNIYGLFVVTSTFGIDslLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSM--VHRFG 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 121583727  266 YEKDTLIFVN------VLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:pfam13853 236 HNVPPLLQIMmanaylFFPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
25-293 5.32e-37

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 133.07  E-value: 5.32e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVvTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd15956    3 LSLPFCFIYVLSLLGNGVLL-SVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTrrlcsiLVAISWAGGFLhAIVQVIFTLQLPL-------CGPNVIDHYM 177
Cdd:cd15956   82 AFSAMESGVLVAMALDRFVAICNPLHYATILT------LEVVAKAGLLL-ALRGVAIVIPFPLlvcrlsfCASHTIAHTY 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 178 CDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILI 256
Cdd:cd15956  155 CEHMAVVKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTvLRLPSPEARGKAFSTCSAHICVILFFYIPGLLS 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 121583727 257 YARDTSAFSYEKDTLIFVN----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15956  235 VLMHRFGHSVPSAAHVLLSnlylLLPPALNPIVYGIRTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
29-293 1.05e-35

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 130.02  E-value: 1.05e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15948    8 FCSAFTVALLGNCTLLY-VIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:cd15948   87 MESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVVKLAC 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 TDTHifVLLVFANSGAICIIIFSLLLV--SYGVILFS-LRAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYA----RDT 261
Cdd:cd15948  167 GDTR--FNNIYGIAVALFIVGLDLMFIilSYVFILRAvLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTmhrfARH 244
                        250       260       270
                 ....*....|....*....|....*....|..
gi 121583727 262 SAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15948  245 VAPHVHILLANFYLLFPPMMNPIVYGVKTKQI 276
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
29-293 1.60e-33

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 124.17  E-value: 1.60e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15954    7 FCFMYIIAMVGNCGLLY-LIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLAC 188
Cdd:cd15954   86 MESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVVKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 TDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSS-EGRRKALSTCGAHVTVVVLFLVPCIL-IYARDTSAFSY 266
Cdd:cd15954  166 ANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSkEARSKAFSTCTAHICAIVITYTPAFFtFFAHRFGGHHI 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 267 EKDTLIFVN----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15954  246 TPHIHIIMAnlylLLPPMMNPIVYGVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
8-293 2.61e-33

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 124.12  E-value: 2.61e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727   8 TEFIILGLSQNPKIEKILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHE 87
Cdd:cd15949    2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSL-HQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  88 KKTISFGCCMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPL 167
Cdd:cd15949   81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 168 CGPNVIDHYMCDLFPLLKLACTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSL-RAHSSEGRRKALSTCGAHVTVV 246
Cdd:cd15949  161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVqRLATSEARLKTFGTCVSHVCAI 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 121583727 247 VLFLVPCIL--IYARDTSAFSYEKDTLI--FVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15949  241 LAFYVPIAVssLIHRFGQNVPPPTHILLanFYLLIPPMLNPIVYGVRTKQI 291
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
29-293 7.76e-29

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 111.78  E-value: 7.76e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  29 FLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15955    7 FCIMFLLAVLGNCTLLIVIKRERSL-HQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRR-LCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLFPLLKLA 187
Cdd:cd15955   86 FESGILLAMALDRYVAICHPLRHSSILTPQvLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLA 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 188 CTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSL-RAHSSEGRRKALSTCGAHVTVVVLFLVPCILIYARDTSAFSY 266
Cdd:cd15955  166 ADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVfRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHV 245
                        250       260       270
                 ....*....|....*....|....*....|.
gi 121583727 267 EKDTLIFVN----VLTPLLNPMVYTFRNKEM 293
Cdd:cd15955  246 APYVHILLSnlylLVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
39-286 3.72e-27

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 106.61  E-value: 3.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727   39 GNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVSSTVTPKMVVDFL-HEKKTISFGCCMTQLFSVHFFSGAEMIVLAAM 117
Cdd:pfam00001   1 GNLLVILVILRNKKLRT-PTNIFLLNLAVADLLFSLLTLPFWLVYYLnHGDWPFGSALCKIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  118 AYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIdhyMCDLFPLLKLACTDTHIFVLL 197
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVT---VCFIDFPEDLSKPVSYTLLIS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  198 VFAnsgaiCIIIFSLLLVSYGVILFSLRAHSSEG--------RRKALSTCGAHVTVVVLFLVPCILIYARDTSAFSYEKD 269
Cdd:pfam00001 157 VLG-----FLLPLLVILVCYTLIIRTLRKSASKQkssertqrRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 121583727  270 TLI--------FVNVLTPLLNPMVY 286
Cdd:pfam00001 232 RLLdkalsvtlWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
25-290 3.97e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 82.34  E-value: 3.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVH 104
Cdd:cd00637    1 LAVLYILIFVVGLVGNLLVILVILRNRRL-RTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLfpll 184
Cdd:cd00637   80 VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDL---- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 185 klacTDTHIFVLLVFAnsgAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAH------------VTVVVLFLV- 251
Cdd:cd00637  156 ----TLSKAYTIFLFV---LLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRrrrrerkvtktlLIVVVVFLLc 228
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 121583727 252 --PCILIYARDTSAFSYEKDTLIFVNVLTPL------LNPMVYTFRN 290
Cdd:cd00637  229 wlPYFILLLLDVFGPDPSPLPRILYFLALLLaylnsaINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-297 2.07e-13

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 68.74  E-value: 2.07e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRT-VTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPnviDHYMCDLFPL 183
Cdd:cd14967   80 VLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSV---VDCECEFTPN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 lklactDTHIFVLLVFAnsgaiCIIIFSLLLVSYGVILFSLRAHssegrRKALSTCGAhvtVVVLFLV---PCILIYarD 260
Cdd:cd14967  157 ------KIYVLVSSVIS-----FFIPLLIMIVLYARIFRVARRE-----LKAAKTLAI---IVGAFLLcwlPFFIIY--L 215
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 121583727 261 TSAF-SYEKDTLIFVNVLTPL------LNPMVYTFRNKEMINAI 297
Cdd:cd14967  216 VSAFcPPDCVPPILYAVFFWLgylnsaLNPIIYALFNRDFRRAF 259
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
27-293 6.80e-10

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 58.84  E-value: 6.80e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFF---------LAFLSFLDACVS---STVTPKMVVDFLheKKTISFG 94
Cdd:cd14972    3 VVAIVLGVFIVVENSLVLAAIIKNRRL-HKPMYILianlaaadlLAGIAFVFTFLSvllVSLTPSPATWLL--RKGSLVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  95 CCMTQLFSvhffsgaemivLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIvqviftlqLPLCGPNVI- 173
Cdd:cd14972   80 SLLASAYS-----------LLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLAL--------LPVLGWNCVl 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 174 -DHYMC-DLFPLLklacTDTHIFVLLVFAnsgaicIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAH--------V 243
Cdd:cd14972  141 cDQESCsPLGPGL----PKSYLVLILVFF------FIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQpstsrklaK 210
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 121583727 244 TVVVLFLV------PCILIYARDTSAFSYEKD------TLIFVnVLTPLLNPMVYTFRNKEM 293
Cdd:cd14972  211 TVVIVLGVflvcwlPLLILLVLDVLCPSVCDIqavfyyFLVLA-LLNSAINPIIYAFRLKEM 271
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
23-235 1.47e-08

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 55.03  E-value: 1.47e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIiVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15083    1 YVLGIFILIIGLIGVVGNGL-VIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWaggfLHAIVQVIftlqLPLCGPN--VIDHYM--C 178
Cdd:cd15083   80 GGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVW----LYSLLWVL----PPLFGWSryVLEGLLtsC 151
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 121583727 179 DLFPLLKLACTDTHIFVLLVFANSGAICIIIFslllvSYGVILFSLRAHSSEGRRKA 235
Cdd:cd15083  152 SFDYLSRDDANRSYVICLLIFGFVLPLLIIIY-----CYSFIFRAVRRHEKAMKEMA 203
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
23-251 2.42e-08

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 54.16  E-value: 2.42e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVS-STVTPKMVVDFLHEKKTISFGCCMTQLF 101
Cdd:cd15196    1 KVEIAVLATILVLALFGNSCVLLVLYRRRRKLS-RMHLFILHLSVADLLVAlFNVLPQLIWDITYRFYGGDLLCRLVKYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 SVhFFSGAEMIVLAAMAYDRYVAICKPLHySSILTRRLCSILVAISWAGGFLHAIVQV-IFTLQLPLCGpnvidHYMC-- 178
Cdd:cd15196   80 QV-VGMYASSYVLVATAIDRYIAICHPLS-SHRWTSRRVHLMVAIAWVLSLLLSIPQLfIFSYQEVGSG-----VYDCwa 152
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 121583727 179 DLFPLLKLACTDTHIFVllvfansgAICIIIFSLLLVSYGVILFSLrahssegRRKALSTCGAHVTVVVLFLV 251
Cdd:cd15196  153 TFEPPWGLRAYITWFTV--------AVFVVPLIILAFCYGRICYVV-------WRAKIKTVKLTLVVVACYIV 210
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
24-292 3.19e-08

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 53.75  E-value: 3.19e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd14969    1 YVLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLhYSSILTRRLCSILVAISWAGGFLHAIvqviftlqLPLCGPNVI----DHYMCD 179
Cdd:cd14969   81 TFLGLVSISTLAALAFERYLVIVRPL-KAFRLSKRRALILIAFIWLYGLFWAL--------PPLFGWSSYvpegGGTSCS 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 180 LFPLLKLACTDTHIFVLLVFANSGAICIIIFslllvSYGVILFSLRAHSSEGRRKALSTCGA-------HVTVVVLFLVP 252
Cdd:cd14969  152 VDWYSKDPNSLSYIVSLFVFCFFLPLAIIIF-----CYYKIYRTLRKMSKRAARRKNSAITKrtkkaekKVAKMVLVMIV 226
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 121583727 253 CILI----YARDTSAFSYEKDTLI--FVNVLTPLL-------NPMVYTFRNKE 292
Cdd:cd14969  227 AFLIawtpYAVVSLYVSFGGESTIppLLATIPALFaksstiyNPIIYVFMNKQ 279
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
27-153 3.95e-07

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 50.75  E-value: 3.95e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFlHEKKTISFGCCMTQL--FSVH 104
Cdd:cd14997    5 VVYGVIFVVGVLGN-VLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVET-WAREPWLLGEFMCKLvpFVEL 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd14997   83 TVAHASVLTILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALL 131
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
40-293 2.10e-06

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 48.30  E-value: 2.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  40 NMIIVVTIIYSPALLSSPMYFFLAFLSFLDAcVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEMIVLAAMAY 119
Cdd:cd15341   18 NVAVLYLILSSPKLRRKPSYLFIGSLALADF-LASVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMSFTASLGSLLLMAF 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 120 DRYVAICKPLHYSSILTRRLCSILVAISWaggflhaiVQVIFTLQLPLCGPNV--IDHYMCDLFPLLklacTDTHIFVLL 197
Cdd:cd15341   97 DRYVCIYYPSEYKALVTRKRALVALAVMW--------VLTALIAYLPLMGWNCcpLNSPCSELFPLI----PNDYLLSWL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 198 VFAnsgaicIIIFSLLLVSYGVILFSLRAH--------SSEGRRKA-------LSTCGAHVTVVVL---FLVPCILIYAR 259
Cdd:cd15341  165 LLV------AILLSGIIYTYGHVLWKAHKHvvymekhqDQQGPGNArmrldvrLAKTLGLVLAVLLicwSPVLALMMHSL 238
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 121583727 260 DTSAFSYEKDTLIFVNVL---TPLLNPMVYTFRNKEM 293
Cdd:cd15341  239 FTSLSDHIKKAFAFCSTLclvNSMVNPIIYALRSREL 275
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
30-299 3.68e-06

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 47.52  E-value: 3.68e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  30 LLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKK-TISFGCCMTQLFSVHFFSG 108
Cdd:cd15306    8 LMVIIPTIGGNILVILAVSLEKKLQYATNYFLMS-LAVADLLVGLFVMPIALLTILFEAMwPLPLVLCPIWLFLDVLFST 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNvidHYMCDLfpllklac 188
Cdd:cd15306   87 ASIMHLCAISLDRYIAIKKPIQASQYNSRATAFIKITVVWLISIGIAIPVPIKGIETDVDNPN---NITCVL-------- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 tDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVP-------CILIYARDT 261
Cdd:cd15306  156 -TKERFGDFILFGSLAAFFTPLAIMIVTYFLTIHALRKQTITNEQRASKVLGIVFFLFLLMWCPffitnitSVLCDSCNQ 234
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 121583727 262 SAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAIRK 299
Cdd:cd15306  235 TTLQMLMEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGR 272
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
24-157 6.80e-06

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 46.96  E-value: 6.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGnmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTV-TPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15065    2 IGIFLSLIIVLAIFGN--VLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVmTFAVVNDLLGYWLFGETFCNIWISFD 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 121583727 103 VhFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIV 157
Cdd:cd15065   80 V-MCSTASILNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFL 133
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
24-166 7.83e-06

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 46.39  E-value: 7.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPkmvvdfLHEKKTIS----FGCCMTQ 99
Cdd:cd15055    2 LLYIVLSSISLLTVLGNLLVIISISHFKQL-HTPTNLLLLSLAVADFLVGLLVMP------FSMIRSIEtcwyFGDTFCK 74
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 121583727 100 LFSV--HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLP 166
Cdd:cd15055   75 LHSSldYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNQP 143
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
23-164 8.67e-06

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 46.35  E-value: 8.67e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSS-TVTPKMVVDFLHEKKTISFGC-CMTQL 100
Cdd:cd15387    1 KVEVTVLALILFLALTGN-ICVLLAIHTTRHKHSRMYFFMKHLSIADLVVAVfQVLPQLIWDITFRFYGPDFLCrLVKYL 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 121583727 101 FSVHFFSGAEMIVLaaMAYDRYVAICKPLHYssiLTRRLCSILVAISWAGGFLHAIVQV-IFTLQ 164
Cdd:cd15387   80 QVVGMFASTYMLLL--MSIDRCLAICQPLRS---LHRRSDRVYVLFSWLLSLVFSIPQVhIFSLR 139
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
31-149 1.03e-05

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 46.29  E-value: 1.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  31 LVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTP---KMVVdflheKKTISFGCCMTQLF-SVHFF 106
Cdd:cd15058    9 LIILAIVVGNLLVIIAIARTSRLQTMTNIFITS-LACADLVMGLLVVPlgaTIVV-----TGKWQLGNFWCELWtSVDVL 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 121583727 107 S-GAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15058   83 CvTASIETLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWI 126
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
24-148 1.29e-05

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 45.90  E-value: 1.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVV----------DFLHEKKT-IS 92
Cdd:cd15317    2 IIYIVLVLAMLITVSGNLVVIISISHFKQL-HSPTNMLVLSLATADFLLGLCVMPFSMIrtvetcwyfgDLFCKFHTgLD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 121583727  93 FGCCMTQLFSVHFfsgaemivlaaMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15317   81 LLLCTTSIFHLCF-----------IAIDRYYAVCDPLRYPSKITVQVAWRFIAIGW 125
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
36-293 1.69e-05

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 45.44  E-value: 1.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  36 TVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEMIVLA 115
Cdd:cd15104   13 IITGNLLVIVALLKLIRKKDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVLCLLRMCFVITSCAASVLSLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 116 AMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTlqlplcGPNVIDHY-MCDLFPLLKLactdtHIF 194
Cdd:cd15104   93 AIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIGFLPLISP------QFQQTSYKgKCSFFAAFHP-----RVL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 195 VLLVFANSGAICIIIFSLllvsYGVILFSLRAHSSEGRR------------------KALSTCGAHVTVVVLFLVP---C 253
Cdd:cd15104  162 LVLSCMVFFPALLLFVFC----YCDILKIARVHSRAIYKvehalarqihprrtlsdfKAARTVAVLIGCFLLSWLPfqiT 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 121583727 254 ILIYARDTSAFSYE--KDTLIFVNVLTPLLNPMVYTFRNKEM 293
Cdd:cd15104  238 GLVQALCDECKLYDvlEDYLWLLGLCNSLLNPWIYAFWQKEV 279
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
24-148 1.77e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 45.34  E-value: 1.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15329    2 LIGIVLLIIILGTVVGNALVIIAVCLVKKL-RTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILCDVWISFD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15329   81 VLLCTASILNLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVW 125
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
28-164 2.08e-05

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 45.44  E-value: 2.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVS-STVTPKMVVDFLHEKKTISFGC-CMTQLFSVHF 105
Cdd:cd14986    6 VLGVLFVFTLVGNGLVILVLRRKRKK-RSRVNIFILNLAIADLVVAfFTVLTQIIWEATGEWVAGDVLCrIVKYLQVVGL 84
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 106 FSGAEMIVlaAMAYDRYVAICKPLhySSILTRRLCSILVAISWAGGFLHAIVQ-VIFTLQ 164
Cdd:cd14986   85 FASTYILV--SMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIPQlVIFVER 140
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
24-148 2.24e-05

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 45.04  E-value: 2.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEkKTISFG---CCMTQL 100
Cdd:cd15067    1 LLGVVLSLFCLVTVAGN-LLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTG-GYWLFGrdwCDVWHS 78
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 101 FSVhFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15067   79 FDV-LASTASILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVW 125
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
28-148 2.39e-05

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 45.06  E-value: 2.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFF--LAFLSFLDACVSSTVTPKMVVdfLHEKKTISFGCCMTQLFSVhF 105
Cdd:cd15066    5 AMTLIILAAIFGNLLVIISVMRHRKLRVITNYFVvsLAMADMLVALCAMTFNASVEI--TGRWMFGYFMCDVWNSLDV-Y 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15066   82 FSTASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVW 124
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
24-155 2.49e-05

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 45.04  E-value: 2.49e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLheKKTISFGCCMTQLFSV 103
Cdd:cd15312    2 AMYLFMAGAILLTVFGNLMVIISISHFKQL-HSPTNFLILSLAITDFLLGFLVMPYSMVRSV--ESCWYFGDLFCKIHSS 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 121583727 104 --HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHA 155
Cdd:cd15312   79 ldMMLSTTSIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFA 132
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
24-296 3.10e-05

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 44.63  E-value: 3.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFL-LVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15064    1 VLISVLLsLIILATILGNALVIAAILLTRKL-HTPANYLIASLAVADLLVAVLVMPLSAVYELTGRWILGQVLCDIWISL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVqviftlqlPLCG---PNVIDHYmcd 179
Cdd:cd15064   80 DVTCCTASILHLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLP--------PLFGwrtPDSEDPS--- 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 180 lfpllklACTDTHIFVLLVFANSGAIcIIIFSLLLVSYGVIlfsLRAHSSEgrRKALSTCGAHVTVVVL-----FLVPCI 254
Cdd:cd15064  149 -------ECLISQDIGYTIFSTFGAF-YIPLLLMLILYWKI---YRAAARE--RKAAKTLGIILGAFIVcwlpfFLVALI 215
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 121583727 255 LIYARDTSAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINA 296
Cdd:cd15064  216 VPLCSHCWIPLALKSFFLWLGYFNSLINPLIYTFFNKDFRKA 257
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
32-296 3.28e-05

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 44.58  E-value: 3.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  32 VYMATVGGNMIIVVTIIYSPALLSSPMYFfLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEM 111
Cdd:cd15330   10 LILCAIFGNACVVAAIALERSLQNVANYL-IGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 112 IVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVI-FTLQLPLCGPNvidhymcdlfpllklACTD 190
Cdd:cd15330   89 LHLCAIALDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISIPPMLgWRTPEDRSDPD---------------ACTI 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 191 THIFVLLVFANSGAICIIIFsLLLVSYGVILfslRAHSSEgrRKALSTCGAHVTVVVL-----FLVPCILIYARDTSAF- 264
Cdd:cd15330  154 SKDPGYTIYSTFGAFYIPLI-LMLVLYGRIF---KAAARE--RKTVKTLGIIMGTFILcwlpfFIVALVLPFCESTCHMp 227
                        250       260       270
                 ....*....|....*....|....*....|..
gi 121583727 265 SYEKDTLIFVNVLTPLLNPMVYTFRNKEMINA 296
Cdd:cd15330  228 ELLGAIINWLGYSNSLLNPIIYAYFNKDFQSA 259
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
26-156 3.94e-05

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 44.34  E-value: 3.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  26 FVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVS-STVTPKMVVDFLHEKKTISFGCCMTQlFSVH 104
Cdd:cd15197    4 LATLWVLFVFIVVGNSSVLFALWMRKAK-KSRMNFFITQLAIADLCVGlINVLTDIIWRITVEWRAGDFACKVIR-YLQV 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 121583727 105 FFSGAEMIVLAAMAYDRYVAICKPLHYSSilTRRLCSILVAISWAGGFLHAI 156
Cdd:cd15197   82 VVTYASTYVLVALSIDRYDAICHPMNFSQ--SGRQARVLICVAWILSALFSI 131
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
24-156 5.38e-05

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 44.27  E-value: 5.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK--TISFGCCMTQLF 101
Cdd:cd14979    2 LVTAIYVAIFVVGIVGNLLTCIVIARHKSL-RTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPwaFGDGGCKLYYFL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 121583727 102 SvHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAI 156
Cdd:cd14979   81 F-EACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAI 134
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
24-288 5.90e-05

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 43.97  E-value: 5.90e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15012    1 IFIILYTLVFCCCFFGN-LLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMcdlfpl 183
Cdd:cd15012   80 SLSYTASIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVEILVTQDGQEEE------ 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 lkLACTDTHIFVLLVFANSGAIC--IIIFSLLLVSYGVILFSL-RAHSSEGRRKALSTCgahVTVVVLFLVPCILIYARd 260
Cdd:cd15012  154 --ICVLDREMFNSKLYDTINFIVwyLIPLLIMTVLYSKISIVLwKSSSIEARRKVVRLL---VAVVVSFALCNLPYHAR- 227
                        250       260
                 ....*....|....*....|....*...
gi 121583727 261 tSAFSYEKDTLIFVNVLTPLLNPMVYTF 288
Cdd:cd15012  228 -KMWQYWSEPYRCDSNWNALLTPLTFLV 254
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
30-291 6.76e-05

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 43.46  E-value: 6.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  30 LLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTP-KMVVDFLHEKKTISFGCCMTQLFSVHFFSG 108
Cdd:cd15052    8 LLLVIATIGGNILVCLAISLEKRLQNVTNYFLMS-LAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTLDVLFCT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPlcgPNVIDHYMCDLFpllklac 188
Cdd:cd15052   87 ASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDT---TNVLNNGTCVLF------- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 189 tdTHIFVLlvfanSGAIC--IIIFSLLLVSYGVILFSLRAhssegRRKALSTCGAHVTVVVL-----FLVPCILIYARDT 261
Cdd:cd15052  157 --NPNFVI-----YGSIVafFIPLLIMVVTYALTIRLLSN-----EQKASKVLGIVFAVFVIcwcpfFITNILTGLCEEC 224
                        250       260       270
                 ....*....|....*....|....*....|..
gi 121583727 262 SAFSYEKDTLIFV--NVLTPLLNPMVYTFRNK 291
Cdd:cd15052  225 NCRISPWLLSVFVwlGYVSSTINPIIYTIFNK 256
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
24-292 6.83e-05

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 43.63  E-value: 6.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIiYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15333    6 SLAVLLALITLATTLSNAFVIATI-YLTRKLHTPANYLIASLAVTDLLVSILVMPISIVYTVTGTWTLGQVVCDIWLSSD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWaggflhaiVQVIFTLQLPLCGPNVIDHymcdlfPL 183
Cdd:cd15333   85 ITCCTASILHLCVIALDRYWAITDAVEYSKKRTPKRAAVMIALVW--------VISISISLPPFFWRQAKAE------EE 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 184 LKLACTDTHIFVLLVFANSGAICIIIFsLLLVSYGVILFSLRAHssegRRKALSTCGAHVTVVVL-----FLVPCILIYA 258
Cdd:cd15333  151 VSECVVNTDHILYTVYSTVGAFYIPTL-LLIALYGRIYVEARAR----ERKATKTLGIILGAFIVcwlpfFIISLVLPIC 225
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 121583727 259 RDTSAFSYEK-DTLIFVNVLTPLLNPMVYTFRNKE 292
Cdd:cd15333  226 KDACWFHLAIfDFFTWLGYLNSLINPIIYTMSNED 260
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
24-149 7.70e-05

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 43.72  E-value: 7.70e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTvTPKMVVDFLHEKKTI-SFGCCMTQLFS 102
Cdd:cd15079    2 LLGFIYIFLGIVSLLGN-GLVIYIFSTTKSLRTPSNMLVVNLAISDFLMMIK-MPIFIYNSFYEGWALgPLGCQIYAFLG 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 121583727 103 VHFFSGAeMIVLAAMAYDRYVAICKPLHYSSiLTRRLCSILVAISWA 149
Cdd:cd15079   80 SLSGIGS-IWTNAAIAYDRYNVIVKPLNGNP-LTRGKALLLILFIWL 124
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-153 9.23e-05

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 43.12  E-value: 9.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPmYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15061    1 ILISFLILAIIFTIFGNLLVILAVATTRRLRTIT-NCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLD 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd15061   80 VLLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLL 129
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
27-288 9.45e-05

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 43.36  E-value: 9.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSP-MYFF---LAFLSFLdacvsstVT-PKMVVDFLHEKKTISFGC-CMTQL 100
Cdd:cd14984    5 VLYSLVFLLGLVGNSLVLLVLLYYRKLRSMTdVYLLnlaLADLLFV-------LTlPFWAVYAADGWVFGSFLCkLVSAL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 101 FSVHFFSGaeMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQlplcgPNVIDHYMCDL 180
Cdd:cd14984   78 YTINFYSG--ILFLACISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLSLPEFIFSQV-----SEENGSSICSY 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 181 -FPLLklacTDTHIFVLLVFANSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLFLVP------- 252
Cdd:cd14984  151 dYPED----TATTWKTLLRLLQNILGFLLPLLVMLFCYSRIIRTLLRARNHKKHRALRVIFAVVVVFFLCWLPynivlll 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 121583727 253 ----CILIYARDTSAFSYEKDTLIFVNVLTPL---LNPMVYTF 288
Cdd:cd14984  227 dtlqLLGIISRSCELSKSLDYALQVTESLAFShccLNPVLYAF 269
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
23-174 1.11e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 43.27  E-value: 1.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSS-TVTPKMVVDFLHEKKTISFGC-CMTQL 100
Cdd:cd15385    1 KLEIAVLAVIFAVAVIGNSSVLLALYKTKKK-ASRMHLFIKHLSLADLVVAFfQVLPQLCWDITYRFYGPDFLCrIVKHL 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 121583727 101 FSVHFFSGAEMIVlaAMAYDRYVAICKPLHYSSILTRRlCSILVAISWAGGFLHAIVQ-VIFTLQLPLCGPNVID 174
Cdd:cd15385   80 QVLGMFASTYMLV--MMTADRYIAICHPLKTLQQPTKR-SYLMIGSAWALSFILSTPQyFIFSLSEIENGSGVYD 151
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
28-148 1.23e-04

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 42.78  E-value: 1.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFF--LAFLSFLdacVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHF 105
Cdd:cd15336    6 VILIIGITGMLGNALVIYAFCRSKKLRTPANYFIinLAVSDFL---MSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGAL 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15336   83 FGITSMITLLAISLDRYLVITKPLASIRWVSKKRAMIIILLVW 125
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
27-291 1.49e-04

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 42.49  E-value: 1.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAF----LSFLDACVSSTVTPKMVVDFLhekktisFGCCMTQLfs 102
Cdd:cd15979    5 LLYSVIFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLalsdLMLAVFCMPFTLIPNLMGTFI-------FGEVICKA-- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 103 VHFFSGAEMIV----LAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMC 178
Cdd:cd15979   76 VAYLMGVSVSVstfsLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPVPVGDRPRGHQC 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 179 DL-FPLLKLACTDTHIFVLLVFANSGAICIiifslllVSYGVILFSLRAHSSEGRRkalsTCGAHVTVVVLFLVPCILIY 257
Cdd:cd15979  156 RHaWPSAQVRQAWYVLLLLILFFIPGVVMI-------VAYGLISRELYRGLLAKKR----VIRMLVVIVAMFFLCWLPIF 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 121583727 258 ARDT-------SAFSYEKDTLI-FVNVL---TPLLNPMVYTFRNK 291
Cdd:cd15979  225 SANTwrafdplSAHRALSGAPIsFIHLLsytSACVNPLVYCFMNR 269
7tmA_TAAR6_8_9 cd15316
trace amine-associated receptors 6, 8, and 9, member of the class A family of ...
24-148 1.55e-04

trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320439 [Multi-domain]  Cd Length: 290  Bit Score: 42.54  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15316    2 ILYIVLGFGAVLAVFGNLLVMISILHFKQL-HSPTNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGESFCTFHTCCD 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15316   81 VSFCYASLFHLCFISVDRYIAVTDPLVYPTKFTVSVSGICISVSW 125
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
25-152 1.62e-04

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 42.61  E-value: 1.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  25 LFVVFLLVYMA-TVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVvdflhekkTISFGCCmTQLFSV 103
Cdd:cd15069    2 TYVALELIIAAlSVAGNVLVCAAVGTNSTL-QTPTNYFLVSLAAADVAVGLFAIPFAI--------TISLGFC-TDFHSC 71
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 121583727 104 HFF-------SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGF 152
Cdd:cd15069   72 LFLacfvlvlTQSSIFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAF 127
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
24-156 1.67e-04

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 42.65  E-value: 1.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVY--MATVGGNMIIVVTIIYSPALLssPMYFFLAFLSFLDACVSSTVTPKMVVD-FLHEkktISFG--CCMT 98
Cdd:cd15074    1 IIIGIYLTVIgiLSTLGNGTVLFVLYRRRSKLK--PAELLTVNLAVSDLGISVFGYPLAIISaFAHR---WLFGdiGCVF 75
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 121583727  99 QLFSVHFFSGAEMIVLAAMAYDRYVAICKPlHYSSILTRRLCSILVAISWAGGFLHAI 156
Cdd:cd15074   76 YGFCGFLFGCCSINTLTAISIYRYLKICHP-PYGPKLSRRHVCIVIVAIWLYALFWAV 132
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
24-296 1.68e-04

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 42.42  E-value: 1.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMA-TVGGNMIIVVTII-YSPalLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTisFGCCMTQLF 101
Cdd:cd15060    1 VVTTILLSVIIAfTIVGNILVILSVFtYRP--LRIVQNFFIVSLAVADLAVAIFVLPLNVAYFLLGKWL--FGIHLCQMW 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 SVH--FFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAggfLHAIVQVIftlqlPLCGPNVIDHYMCD 179
Cdd:cd15060   77 LTCdiLCCTASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWA---LSALISVP-----PLIGWNDWPENFTE 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 180 LFPllklaCTDTHIFVLLVFANSGAICIIIFSLLLVSYGVilfsLRAHSSEgrRKALSTCGAHVTVVVL-----FLVPCI 254
Cdd:cd15060  149 TTP-----CTLTEEKGYVIYSSSGSFFIPLLIMTIVYVKI----FIATSKE--RRAARTLGIIMGVFVVcwlpfFLMYVI 217
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 121583727 255 LIYARDTSAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINA 296
Cdd:cd15060  218 LPFCETCSPSAKVVNFITWLGYVNSALNPVIYTIFNLDFRRA 259
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-162 1.94e-04

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 42.09  E-value: 1.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTI----SFGCCMTQLFSV 103
Cdd:cd15103    6 VFLTLGIVSLLENILVILAIAKNKNL-HSPMYFFICSLAVADMLVSVSNALETIVIILLNNGYLvprdSFEQHIDNVIDS 84
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121583727 104 HFFSG--AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFT 162
Cdd:cd15103   85 MICSSllASICSLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGILFIIYS 145
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
24-254 2.11e-04

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 42.02  E-value: 2.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGN-MIIVVTIIYSPALLSSPMYFFL-----AFLSFLDACVSSTVTPKMVVDFLhekktisFGCCM 97
Cdd:cd15098    2 IVPVVFGLIFCLGVLGNsLVITVLARVKPGKRRSTTNVFIlnlsiADLFFLLFCVPFQATIYSLPEWV-------FGAFM 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  98 TQLfsVHFFSGAEMIV----LAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAI-VQVIFTLQLPLCGPNv 172
Cdd:cd15098   75 CKF--VHYFFTVSMLVsiftLVAMSVDRYIAVVHSRTSSSLRTRRNALLGVLVIWVLSLAMASpVAVHQDLVHHWTASN- 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 173 idHYMC-DLFPllklACTDTHIFVLLVFANSGAICIIifsLLLVSYGVILFSLRAHSSEGRRKA-LSTCGAHVTVVVLFL 250
Cdd:cd15098  152 --QTFCwENWP----EKQQKPVYVVCTFVFGYLLPLL---LITFCYAKVLNHLHKKLKNMSKKSeRSKKKTAQTVLVVVV 222

                 ....
gi 121583727 251 VPCI 254
Cdd:cd15098  223 VFGI 226
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
30-300 2.14e-04

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 42.16  E-value: 2.14e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  30 LLVYMATVGGNMIIVVTIIYSPalLSSPMYFFLAFLSFLDACV----SSTVTPKMVVDFLHEKKTIsfgcCMTQLFSVHF 105
Cdd:cd15084   19 MVVALASFVNGLVIVVSIKYKK--LRSPLNYILVNLAVADLLVtlfgSSVSFSNNIVGFFVFGKTM----CEFEGFMVSL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHySSILTRRLCSILVAISWAGGFLHAIVQVI-FTLQLP-----LCGPNvidHYMcd 179
Cdd:cd15084   93 TGIVGLWSLAILAFERYLVICKPMG-DFRFQQRHAVSGCAFTWGWSLLWTSPPLFgWSSYVPeglrtSCGPN---WYT-- 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 180 lfpllklACTDTHIFVLLVFANsgaiCIII-FSLLLVSYGVILFSLRA-----HSSEGRRKALSTCGAHVTVVVLFLVPC 253
Cdd:cd15084  167 -------GGTNNNSYILALFVT----CFALpLSTIIFSYSNLLLTLRAvaaqqKESETTQRAEKEVTRMVIAMVMAFLIC 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 121583727 254 ILIYARDTSAFSYEKDTLI---------FVNVLTPLLNPMVYTFRNKEMINAIRKM 300
Cdd:cd15084  236 WLPYATFAMVVATNKDVVIqptlaslpsYFSKTATVYNPIIYVFMNKQFRSCLLEL 291
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
28-149 2.40e-04

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 42.20  E-value: 2.40e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLheKKTISFGCCMTQLF-SVHFF 106
Cdd:cd15959    6 LLSLAILVIVGGNLLVIVAIAKTPRL-QTMTNVFVTSLACADLVMGLLVVPPGATILL--TGHWPLGTTVCELWtSVDVL 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 121583727 107 S-GAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15959   83 CvTASIETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWA 126
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
27-153 2.78e-04

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 41.48  E-value: 2.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMAT-VGGNMIIVVTIIYSPaLLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHF 105
Cdd:cd15210    4 AVWGIVFMVVgVPGNLLTVLALLRSK-KLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYG 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd15210   83 LVAVSLLTLVLITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFG 130
7tmA_CB1 cd15340
cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G ...
36-184 3.19e-04

cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320462 [Multi-domain]  Cd Length: 292  Bit Score: 41.82  E-value: 3.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  36 TVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDaCVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEMIVLA 115
Cdd:cd15340   14 TVLENLLVLCVILHSRSLRCRPSYHFIGSLAVAD-LLGSVIFVYSFLDFHVFHRKDSPNVFLFKLGGVTASFTASVGSLF 92
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121583727 116 AMAYDRYVAICKPLHYSSILTRRLCSILVAISWAggflhaiVQVIFTLqLPLCGPNVID-HYMC-DLFPLL 184
Cdd:cd15340   93 LTAIDRYISIHRPLAYKRIVTRTKAVIAFCVMWT-------IAIVIAV-LPLLGWNCKKlNSVCsDIFPLI 155
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
24-146 3.34e-04

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 41.76  E-value: 3.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSsPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15085    2 ILSFLMFLNATFSIFNNVLVIAVTLKNPQLRN-PINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAV 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAI 146
Cdd:cd15085   81 NYFGIVSLWSLTLLAYERYNVVCKPMGGLKLSTKRGYQGLLFI 123
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
24-153 3.62e-04

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 41.33  E-value: 3.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15063    2 ISLLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVS-LACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd15063   81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFV 130
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
26-153 4.34e-04

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 41.09  E-value: 4.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  26 FVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFfLAFLSFLDACVSSTVTPKMVVDFLhEKKTISFGCCMTQLFsVHF 105
Cdd:cd14968    4 IVLEVLIAVLSVLGNVLVIWAVKLNRALRTVTNYF-IVSLAVADILVGALAIPLAILISL-GLPTNFHGCLFMACL-VLV 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 106 FSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd14968   81 LTQSSIFSLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFL 128
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
100-292 5.27e-04

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 41.10  E-value: 5.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 100 LFSVHFFSGaeMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWaggfLHAIVQVIFTLQLPLCGPNVIDHYMCD 179
Cdd:cd14982   79 LFYINMYGS--ILFLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVW----ILVLVASVPLLLLRSTIAKENNSTTCF 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 180 LFPLLKLACTDTHIFVLLVFansgaICIIIFSLLLVSYGVILFSLR-----AHSSEGRRKALSTCGAHVTVVVLFLVP-- 252
Cdd:cd14982  153 EFLSEWLASAAPIVLIALVV-----GFLIPLLIILVCYSLIIRALRrrskqSQKSVRKRKALRMILIVLAVFLVCFLPyh 227
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 121583727 253 ----CILIYARDTSAFSYEKDTLIFVNVLTPLL-------NPMVYTFRNKE 292
Cdd:cd14982  228 vtriLYLLVRLSFIADCSARNSLYKAYRITLCLaslnsclDPLIYYFLSKT 278
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
30-149 5.34e-04

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 41.04  E-value: 5.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  30 LLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKK-TISFGCCMTQLFSVHFFSG 108
Cdd:cd15305    8 LIIIILTIGGN-ILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAILYDYAwPLPRYLCPIWISLDVLFST 86
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15305   87 ASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWT 127
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
24-162 5.45e-04

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 40.90  E-value: 5.45e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15219    1 LLAVLLVVVLVVSLLSNLLVLLCFLYSAELRKQVPGIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLE 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFT 162
Cdd:cd15219   81 TFLTSNAMLSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLVALFLS 139
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
93-251 5.88e-04

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 40.69  E-value: 5.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  93 FGCCMTqlfsvhFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIvqviftlqLPLCGPNV 172
Cdd:cd14981   79 FGFMMS------FFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIAS--------LPLLGLGS 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 173 IDHYMCDLFPLLKLACTDT-HIFVLLVFANSGAICIIIFSL--LLVSYGVILFSLRAHSSEGRRKALSTCGAHVTVVVLF 249
Cdd:cd14981  145 YVLQYPGTWCFLDFYSKNTgDAAYAYLYSILGLLILLVTLLcnLLVIITLLRMRRRKKRHRRSRRSARRQKRNEIQMVVL 224

                 ..
gi 121583727 250 LV 251
Cdd:cd14981  225 LL 226
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
24-224 6.74e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 40.66  E-value: 6.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHekKTISFGCCMTQLFSv 103
Cdd:cd14993    2 VLIVLYVVVFLLALVGNSLVIAVVLRNKHM-RTVTNYFLVNLAVADLLVSLFCMPLTLLENVY--RPWVFGEVLCKAVP- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 hFFSG----AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPN--VIDHYM 177
Cdd:cd14993   78 -YLQGvsvsASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSEpgTITIYI 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 178 C-DLFPLLklacTDTHIFVLLVFAnsgAICIIIFSLLLVSYGVILFSL 224
Cdd:cd14993  157 CtEDWPSP----ELRKAYNVALFV---VLYVLPLLIISVAYSLIGRRL 197
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
26-235 7.86e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 40.37  E-value: 7.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  26 FVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVdflhEKKTIS-----FGCCMTQL 100
Cdd:cd15382    4 IIVYSVLFLIAAVGNLTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIG----WAATVAwlagdFLCRLMLF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 101 FSVHFFSGAeMIVLAAMAYDRYVAICKPLhySSILTRRLCSILVAISWAGGFLHAIVQ-VIFTLQlplCGPNVIDHYMC- 178
Cdd:cd15382   80 FRAFGLYLS-SFVLVCISLDRYFAILKPL--RLSDARRRGRIMLAVAWVISFLCSIPQsFIFHVE---SHPCVTWFSQCv 153
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 121583727 179 --DLFPllklacTDTHIFVLLVFaNSGAICIIIFSLLLVSYGVILFSLRAHSSEGRRKA 235
Cdd:cd15382  154 tfNFFP------SHDHELAYNIF-NMITMYALPLIIIVFCYSLILCEISRKSKEKKEDV 205
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
36-149 8.23e-04

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 40.23  E-value: 8.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  36 TVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEMIVLA 115
Cdd:cd15318   14 IVLGNLFVVVTVSHFKAL-HTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDTLFCLTSIFHLC 92
                         90       100       110
                 ....*....|....*....|....*....|....
gi 121583727 116 AMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15318   93 FISIDRHCAICDPLLYPSKFTIRVACIFIAAGWL 126
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
28-297 8.48e-04

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 40.30  E-value: 8.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFgccMTQLFSVHFFS 107
Cdd:cd15962    5 IMLCISGTVIACENAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISL---ITVGFLVASFT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 108 gAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAggflhaiVQVIFTLqLPLCGPNVIDHYM-CDLFPLLkl 186
Cdd:cd15962   82 -ASVSSLLAITVDRYLSLYNALTYYSEKTVLGVHLMLAATWG-------VSLCLGL-LPVLGWNCLEERAsCSIVRPL-- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 187 acTDTHIFVLlvfansGAICIIIFSLLLVSYGVIL---------FSLRAHSSEGRRKALSTCGAHVTVVVL--------- 248
Cdd:cd15962  151 --TKSNVTLL------SASFFFIFILMLHLYIKICkivcrhahqIALQQHFLTASHYVATKKGVSTLAIILgtfgaswlp 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 121583727 249 FLVPCILIYARDTSAFSYekdTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15962  223 FAIYCVVGDHEYPAVYTY---ATLLPATYNSMINPIIYAYRNQEIQRSM 268
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
24-156 8.79e-04

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 40.10  E-value: 8.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFL-LVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFS 102
Cdd:cd15050    1 APLGIALsTISLITVILNLLVLYAVRTERKLHTVGNLYIVS-LSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFWLSM 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAI 156
Cdd:cd15050   80 DYVASTASIFSLFILCIDRYRSVQQPLKYLKYRTKTRASLMISGAWLLSFLWVI 133
7tmA_GPBAR1 cd15905
G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G ...
40-155 8.81e-04

G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G-protein coupled bile acid receptor GPBAR1 is also known as BG37, TGR5 (Takeda G-protein-coupled receptor 5), M-BAR (membrane-type receptor for bile acids), and GPR131. GPBAR1 is highly expressed in the gastrointestinal tract, but also found at many other tissues including liver, colon, heart, skeletal muscle, and brown adipose tissue. GPBAR1 functions as a membrane-bound receptor specific for bile acids, which are the end products of cholesterol metabolism that facilitate digestion and absorption of lipids or fat-soluble vitamins. Bile acids act as liver-specific metabolic signaling molecules and stimulate liver regeneration by activating GPBAR1 and nuclear receptors such as the farnesoid X receptor (FXR). Upon bile acids binding, GPBAR1 activation causes release of the G-alpha(s) subunit and activation of adenylate cyclase. The increase in intracellular cAMP level then stimulates the expression of many genes via the PKA-mediated phosphorylation of cAMP-response element binding protein (CREB). Thus, GPAR1-signalling exerts various biological effects in immune cells, liver, and metabolic tissues. For example, GPBAR1 activation leads to enhanced energy expenditure in brown adipose tissue and skeletal muscle; stimulation of glucagon-like peptide-1 (GLP-1) production in enteroendocrine L-cells; and inhibition of pro-inflammatory cytokine production in macrophages and attenuation of atherosclerosis development. GPBAR1 is a member of the class A rhodopsin-like family of GPCRs, which comprises receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands.


Pssm-ID: 320571 [Multi-domain]  Cd Length: 272  Bit Score: 40.12  E-value: 8.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  40 NMIIVVTIIYSPALLSSPMYFFLAFLsFLDACVSSTV--TPKMVVDflhekKTISFGCCMTQLFSVHFFSGAEMIVLAAM 117
Cdd:cd15905   16 NLFIILGIACNRKLHNTANYFFLSLL-LADLLTGVALpfIPGMSNE-----SRRGYHSCLFVYVAPNFLFLSFLANLLMV 89
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 121583727 118 AYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHA 155
Cdd:cd15905   90 HYERYLCIVYPLQYHNFWVHRWVPLALLLTWALPLLFA 127
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
31-153 1.09e-03

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 40.19  E-value: 1.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  31 LVYMATVGGNMIIVVTI-IYSPALL--SSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFG----CCMTQLFSV 103
Cdd:cd15141    9 LMFAAGVVGNLLALGILgVHRKERRtkSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAQNSSLLGLAagqpLCHLFAFAM 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd15141   89 TFFGLASMLILFAMAVERCLAISHPYFYAQHSGRRLAKLALPAIYAFGAL 138
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
23-174 1.21e-03

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 39.78  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIiVVTIIYSPALLSSPMYFFLAFLSFLDACVSS-TVTPKMVVDFLHEKKTISFGCCMTQLF 101
Cdd:cd15386    1 KVEIGVLAAILVVATAGNLA-VLLAMYRMRRKMSRMHLFVLHLALTDLVVALfQVLPQLIWEITYRFQGPDLLCRAVKYL 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 121583727 102 SV-HFFSGAEMivLAAMAYDRYVAICKPLHYSSILTRRLCsILVAISWAGGFLHAIVQV-IFTLQLPLCGPNVID 174
Cdd:cd15386   80 QVlSMFASTYM--LIMMTVDRYIAVCHPLRTLQQPSRQAY-LMIGATWLLSCILSLPQVfIFSLREVDQGSGVLD 151
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
26-161 1.31e-03

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 39.97  E-value: 1.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  26 FVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLH-EKKTISFGCCMTQLFSVH 104
Cdd:cd15390    4 SIVFVVMVLVAIGGN-LIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYnDWPFGLFYCKFSNFVAIT 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 121583727 105 FFSgAEMIVLAAMAYDRYVAICKPLHYSsiLTRRLCSILVAISWAGGFLHAIVQVIF 161
Cdd:cd15390   83 TVA-ASVFTLMAISIDRYIAIVHPLRPR--LSRRTTKIAIAVIWLASFLLALPQLLY 136
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
24-159 1.60e-03

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 39.72  E-value: 1.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTP-KMVVDFLHEKKTISFgcCMTQLFS 102
Cdd:cd15057    2 ITGCILYLLVLLTLLGNALVIAAVLRFRHLRSKVTNYFIVSLAVSDLLVAILVMPwAAVNEVAGYWPFGSF--CDVWVSF 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 121583727 103 VHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQV 159
Cdd:cd15057   80 DIMCSTASILNLCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPV 136
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
96-155 1.77e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 39.40  E-value: 1.77e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  96 CMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHA 155
Cdd:cd15928   73 CRLMYFFSETCTYASILHITALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVAIVSA 132
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
27-148 1.79e-03

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 39.44  E-value: 1.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLsFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFF 106
Cdd:cd15215    4 VLIVIFLCASLFGNIVLLLVFQRKPQLLQVANRFIFNLL-VADLLQTVLVMPWVIATSVPLFWPLDSHLCTALVVLMHLF 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 121583727 107 SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15215   83 AFAGVNTIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTW 124
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
28-149 1.82e-03

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 39.15  E-value: 1.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFS 107
Cdd:cd15354    6 VFLTLGIISLLENILVILAIVKNKNL-HSPMYFFVCSLAVADMLVSVSNAWETITIYLLNNRHLVIEDAFVRHIDNVFDS 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 108 ------GAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15354   85 licisvVASMCSLLAIAVDRYVTIFYALRYHNIMTVRRAGIIIACIWT 132
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
27-225 1.97e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.15  E-value: 1.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVvtIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFL-----HEKKTISFGCCMTQLF 101
Cdd:cd14978    5 YVLPVICIFGIIGNILNL--VVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIadyssSFLSYFYAYFLPYIYP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 SVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNVIDHYMCDLF 181
Cdd:cd14978   83 LANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYVIPT 162
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 121583727 182 PLLKLACTDTHIFvllVFANSGAICIIIFSLLLVSYGVILFSLR 225
Cdd:cd14978  163 LLRQNETYLLKYY---FWLYAIFVVLLPFILLLILNILLIRALR 203
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
27-148 2.21e-03

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 39.16  E-value: 2.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFF 106
Cdd:cd15307    5 LLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMS-LAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLF 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 121583727 107 SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15307   84 CTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVW 125
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
24-162 2.43e-03

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 39.03  E-value: 2.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNmIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSV 103
Cdd:cd15202    2 LLIVAYSFIIVFSLFGN-VLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQ 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 121583727 104 HFFSGAEMIVLAAMAYDRYVAICKPLhySSILTRRLCSILVAISW----AGGFLHAIVQVIFT 162
Cdd:cd15202   81 YCSVHVSAYTLTAIAVDRYQAIMHPL--KPRISKTKAKFIIAVIWtlalAFALPHAICSKLET 141
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
24-156 2.61e-03

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 38.99  E-value: 2.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFL----AFLSFLDACVSSTVTpkmvvdfLHEKKTISFGCCMTQ 99
Cdd:cd14971    2 IVPLFFALIFLLGLVGNSLVILVVARNKPMRSTTNLFILnlavADLTFLLFCVPFTAT-------IYPLPGWVFGDFMCK 74
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121583727 100 LfsVHFFSGAEMIV----LAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAI 156
Cdd:cd14971   75 F--VHYFQQVSMHAsiftLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAA 133
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
96-292 2.69e-03

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 38.61  E-value: 2.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  96 CMTQLFSVHFFSGAEMIVLAAMAYDRYVAICKPLHySSILTRRLCSILVAISWAGGFLHAIVQVI----FTLQ--LPLCG 169
Cdd:cd15075   73 CVLEGFAVAFFGIAALCTVAVIAVDRLFVVCKPLG-TLTFQTRHALAGIASSWLWSLIWNTPPLFgwgsYQLEgvMTSCA 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 170 PnviDHYMCDLFPLLKLACtdthiFVLLVFAnsgaiciIIFSLLLVSYGVILFSLRAHSSEGRRKALSTCGAHVTV---- 245
Cdd:cd15075  152 P---DWYSRDPVNVSYILC-----YFSFCFA-------IPFAIILVSYGYLLWTLRQVAKLGVAEGGSTAKAEVQVarmv 216
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121583727 246 ---VVLFLVpCILIYArdTSAFSYEKDTLIFVNVLTPLL-----------NPMVYTFRNKE 292
Cdd:cd15075  217 vvmVMAFLL-CWLPYA--AFALTVVSKPDVYINPLIATVpmylaksstvyNPIIYIFMNKQ 274
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
30-137 2.73e-03

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 38.76  E-value: 2.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  30 LLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKK-TISFGCCMTQLFSVHFFSG 108
Cdd:cd15304    8 VIVIILTIAGNILVIMAVSLEKKLQNATNYFLMS-LAIADMLLGFLVMPVSMLTILYGYRwPLPSKLCAVWIYLDVLFST 86
                         90       100
                 ....*....|....*....|....*....
gi 121583727 109 AEMIVLAAMAYDRYVAICKPLHYSSILTR 137
Cdd:cd15304   87 ASIMHLCAISLDRYIAIRNPIHHSRFNSR 115
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
39-155 2.98e-03

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 38.56  E-value: 2.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  39 GNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAEMIVLAAMA 118
Cdd:cd15073   17 SNGIVLVTFVKFREL-RTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLNIFFGMASIGLLTVVA 95
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 121583727 119 YDRYVAICKPLHYSSiLTRRLCSILVAISWAGGFLHA 155
Cdd:cd15073   96 VDRYLTICRPDLGRK-MTTNTYTVMILLAWTNAFFWA 131
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
27-148 3.00e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 38.65  E-value: 3.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFF 106
Cdd:cd15301    5 IVAAVLSLVTVGGNVMVMISFKIDKQLQTISNYFLFS-LAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAIDYLA 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 121583727 107 SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15301   84 SNASVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAW 125
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
23-159 4.26e-03

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 38.45  E-value: 4.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFL-LVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLF 101
Cdd:cd15320    1 RVLTGCFLsVLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAF 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 121583727 102 SVhFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQV 159
Cdd:cd15320   81 DI-MCSTASILNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFIPV 137
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
27-148 4.94e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 37.84  E-value: 4.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVV----DFLHEKKTISFGC----CMT 98
Cdd:cd15350    5 EVFFTIAAVGLLENLLVLVAVIKNKNL-HSPMYFFICSLAVSDMLGSLYKTLENILiilaDMGYLNRRGPFETklddIMD 83
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 121583727  99 QLFSVHFFSgaEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISW 148
Cdd:cd15350   84 SLFCLSLLG--SIFSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIW 131
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
31-153 5.33e-03

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 37.84  E-value: 5.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  31 LVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLheKKTISFGCCMTQLFSVHFFSGAE 110
Cdd:cd15070    9 LIGLCAVVGNVLVIWVVKLNPSLRTTTFYFIVS-LALADIAVGVLVIPLAIVVSL--GVTIHFYSCLFMSCLLVVFTHAS 85
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 121583727 111 MIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFL 153
Cdd:cd15070   86 IMSLLAIAVDRYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFL 128
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
24-291 6.53e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 37.37  E-value: 6.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDA-----CVSSTVTPKMVVDFLhekktisFGCCMT 98
Cdd:cd15206    2 LIIPLYSVIFLLAVVGNILVIVTLVQNKRMRTVTNVFLLN-LAVSDLllavfCMPFTLVGQLLRNFI-------FGEVMC 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  99 QLFSvhFFSGAEMIV----LAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFTLQLPLCGPNvid 174
Cdd:cd15206   74 KLIP--YFQAVSVSVstftLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPILVFSNLIPMSRPG--- 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 175 HYMCDLFPLLKLACTDTHIFVLLVfansgaICIIIFSLLLVSYGVILFSLRahssEGRRKALSTCgahVTVVVLFLVPCI 254
Cdd:cd15206  149 GHKCREVWPNEIAEQAWYVFLDLM------LLVIPGLVMSVAYGLISWTLL----EAKKRVIRML---FVIVVEFFICWT 215
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 255 LIYARDTSAFSYEKD--------TLIFVNVLTPL---LNPMVYTFRNK 291
Cdd:cd15206  216 PLYVINTWKAFDPPSaaryvsstTISLIQLLAYIsscVNPITYCFMNK 263
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
28-162 6.76e-03

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 37.58  E-value: 6.76e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  28 VFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTI---SFGCCMTQLFSVH 104
Cdd:cd15353    6 VFVTLGIVSLLENILVIAAIAKNKNL-HSPMYFFICSLAVADMLVSVSNGSETVVITLLNGNDTdaqSFTVNIDNVIDSV 84
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 105 FFSG--AEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIFT 162
Cdd:cd15353   85 ICSSllASICSLLSIAVDRYFTIFYALQYHNIMTVRRAGVIITCIWTACTVSGVLFIIYS 144
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-160 6.78e-03

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 37.75  E-value: 6.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  24 ILFVVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEkkTISFGCCMTQLfsV 103
Cdd:cd15208    2 VLIALYILVFIVGLVGNVLVCFAVWRNHHMRTVTNYFIVN-LSLADFLVIIICLPATLLVDVTE--TWFFGQVLCKI--I 76
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 121583727 104 HFFSGAEMIV----LAAMAYDRYVAICKPLHYSSILTRRLCSILvaISWAGGFLHAIVQVI 160
Cdd:cd15208   77 PYLQTVSVSVsvltLSCIALDRWYAICHPLMFKSTAKRARVSIL--IIWIVSLLIMIPQAI 135
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
27-232 7.03e-03

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 37.51  E-value: 7.03e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  27 VVFLLVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAFLSFLDACVSSTVTPKMVvDFLHEKKTISFGCCMTQLFSVHFF 106
Cdd:cd15099    5 VLCFLAGPVTFLENILVLLTILSSTALRRRPSYLFIGSLALADMLASVIFTISFL-DFHVFHQRDSRNLFLFKLGGVTMA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 107 SGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAggfLHAIVQViftlqLPLCGPNV--IDHYMCDLFPLL 184
Cdd:cd15099   84 FTASVGSLLLTALDRYLCIYQPSNYKLLVTRTRAKVAILLMWC---VTIIISF-----LPLMGWRCktWDSPCSRLFPYI 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 121583727 185 KlacTDTHIFVLLVFAnsgaiciIIFSLLLVSYGVILFslRAHSSEGR 232
Cdd:cd15099  156 D---RHYLASWTGLQL-------VLLFLIIYAYPYILW--KAHRHEAN 191
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
23-297 8.42e-03

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 37.06  E-value: 8.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  23 KILFVVFLLVYMATVGGNMIIVVTIIYSPALlSSPMYFFLAFLSFLDACVSSTVTPKMVvdfLHEKKTISFGccMTQLF- 101
Cdd:cd15102    1 GATSVVFVAICCFIVLENLLVLIAIWRHMKF-HRPMYYFLGNLALSDLLAGAAYLANIL---LSGARTLRLS--PAQWFl 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 102 ---SVHFFSGAEMIVLAAMAYDRYVAICKPLHYSSILTRRLCsILVAISWaggflhaIVQVIFTLqLPLCGPNVIDHyMC 178
Cdd:cd15102   75 regSMFVALSASVFSLLAIAIERHLTMAKMKPYGASKTSRVL-LLIGACW-------LISLLLGG-LPILGWNCLGA-LD 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727 179 DLFPLLKLACTDTHIFVLLVFANS-GAICIIIFSLLLVSYGVILFSLRAHSSEGRRKALSTcgahVTVVVLFLVPC---- 253
Cdd:cd15102  145 ACSTVLPLYSKHYVLFCVTIFAGIlAAIVALYARIYCLVRASGRKATRASASPRSLALLKT----VLIVLLVFIACwgpl 220
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 121583727 254 -ILIYAR-----DTSAFSYEKDTLIFVNVLTPLLNPMVYTFRNKEMINAI 297
Cdd:cd15102  221 fILLLLDvacpvKTCPILYKADWFLALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
31-149 8.44e-03

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 37.44  E-value: 8.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  31 LVYMATVGGNMIIVVTIIYSPALLSSPmYFFLAFLSFLDACVSSTVTPKMVVDFLHEKKTI-SFGCCMTQLFSVHFFSGA 109
Cdd:cd15005    9 LILCVSLAGNLLFSVLIVRDRSLHRAP-YYFLLDLCLADGLRSLACFPFVMASVRHGSGWIyGALSCKVIAFLAVLFCFH 87
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 121583727 110 EMIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWA 149
Cdd:cd15005   88 SAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWT 127
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
31-161 8.77e-03

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 37.25  E-value: 8.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583727  31 LVYMATVGGNMIIVVTIIYSPALLSSPMYFFLAfLSFLDACVSSTVTPKMVVDFLHEKKTISFGCCMTQLFSVHFFSGAE 110
Cdd:cd17790    9 ILSLVTVTGNLLVLISFKVNSELKTVNNYFLLS-LACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALDYVASNAS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 121583727 111 MIVLAAMAYDRYVAICKPLHYSSILTRRLCSILVAISWAGGFLHAIVQVIF 161
Cdd:cd17790   88 VMNLLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISFVLWAPAILF 138
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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