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Conserved domains on  [gi|268607585|ref|NP_667287|]
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olfactory receptor 619 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
30-305 1.02e-151

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15221:

Pssm-ID: 475119  Cd Length: 275  Bit Score: 426.32  E-value: 1.02e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15221    1 VWISIPFCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15221   81 HFVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15221  161 ARLACADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGdSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15221  241 GR-HIPRHVHILLANLYVLVPPMLNPIVYGVKTKQI 275
 
Name Accession Description Interval E-value
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
30-305 1.02e-151

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 426.32  E-value: 1.02e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15221    1 VWISIPFCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15221   81 HFVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15221  161 ARLACADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGdSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15221  241 GR-HIPRHVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
39-314 3.24e-91

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 273.22  E-value: 3.24e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585   39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:pfam13853   4 MYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:pfam13853  84 VLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIK 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFgGDSIPLHV 278
Cdd:pfam13853 164 VNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRF-GHNVPPLL 242
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 268607585  279 HILLANLYVVLPPSLNPIIYGVKTKQIQERVVQLFS 314
Cdd:pfam13853 243 QIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
 
Name Accession Description Interval E-value
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
30-305 1.02e-151

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 426.32  E-value: 1.02e-151
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15221    1 VWISIPFCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15221   81 HFVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15221  161 ARLACADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGdSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15221  241 GR-HIPRHVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
30-305 1.43e-132

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 377.78  E-value: 1.43e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15917    1 IWLSIPFCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15917   81 HSFTAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15917  161 VKLACGDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDsIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15917  241 GHH-VPPHVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
30-305 6.31e-130

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 371.33  E-value: 6.31e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15952    1 FWIGFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15952   81 HTFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFsIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15952  161 AKLACASIRINIIYGLFAISV-LVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRF 239
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDsIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15952  240 GHN-IPRYIHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
30-305 5.70e-123

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 353.73  E-value: 5.70e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15222    1 HWISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15222   81 HTFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15222  161 MKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDSIPLhVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15222  241 GKHASPL-VHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
30-305 3.12e-119

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 344.25  E-value: 3.12e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15953    1 IWISIPFCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15953   81 HTLSIMESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15953  161 VKLACGDTTINRIYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 gGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15953  241 -GQGIAPHIHIILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
30-305 3.17e-119

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 343.95  E-value: 3.17e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15951    1 VWISIPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15951   81 HSFSTMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15951  161 VKLACADTRVSRAYGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 gGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15951  241 -GHNVPPHVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
30-305 2.88e-112

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 326.29  E-value: 2.88e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15950    1 FWIAIPFCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15950   81 HSFTAVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15950  161 VKLACADPRPSSLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDsIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15950  241 GQG-VPPHTQVLLADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
31-309 1.57e-107

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 314.62  E-value: 1.57e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLH 110
Cdd:cd15223    2 WLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIA 190
Cdd:cd15223   82 FFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 191 RLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFg 270
Cdd:cd15223  162 SLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRF- 240
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 268607585 271 GDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQERV 309
Cdd:cd15223  241 GKTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
29-306 9.23e-106

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 309.91  E-value: 9.23e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  29 HIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFF 108
Cdd:cd15948    1 HPWISIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 109 LHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMG 188
Cdd:cd15948   81 LHSFSIMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 189 IARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHR 268
Cdd:cd15948  161 VVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHR 240
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 269 FGGDSIPlHVHILLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15948  241 FARHVAP-HVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
17-306 1.06e-102

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 302.85  E-value: 1.06e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  17 YTMIGIPGLEDAHIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRS 96
Cdd:cd15949    4 FILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNE 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  97 ISFASCVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGK 176
Cdd:cd15949   84 IPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWYRT 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 177 SIIRHSYCEHMGIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLF 256
Cdd:cd15949  164 NIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAILAF 243
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 268607585 257 YMPVFFSSLGHRFgGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15949  244 YVPIAVSSLIHRF-GQNVPPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
30-305 9.58e-97

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 287.10  E-value: 9.58e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15954    1 IWISIPFCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15954   81 HTFTGMESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15954  161 VKLACANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15954  241 GGHHITPHIHIIMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
30-305 1.09e-92

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 276.75  E-value: 1.09e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15956    1 VWLSLPFCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15956   81 HAFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15956  161 VKLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRF 240
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 gGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15956  241 -GHSVPSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
31-305 6.03e-92

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 274.72  E-value: 6.03e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLH 110
Cdd:cd15955    2 WIGIPFCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVY-RLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15955   82 TLQAFESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLIKlRLHHFRSTVISHSYCEHMAV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15955  162 VKLAADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRF 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDSIPlHVHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15955  242 GHHVAP-YVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
39-314 3.24e-91

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 273.22  E-value: 3.24e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585   39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:pfam13853   4 MYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:pfam13853  84 VLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIK 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFgGDSIPLHV 278
Cdd:pfam13853 164 VNNIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRF-GHNVPPLL 242
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 268607585  279 HILLANLYVVLPPSLNPIIYGVKTKQIQERVVQLFS 314
Cdd:pfam13853 243 QIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRMLL 278
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
30-298 6.87e-84

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 253.95  E-value: 6.87e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd13954    1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd13954   81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd13954  161 LKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                        250       260
                 ....*....|....*....|....*....
gi 268607585 270 ggdSIPLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd13954  241 ---SYSSDLDKVVSVFYTVVTPMLNPIIY 266
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
36-307 1.02e-69

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 218.09  E-value: 1.02e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVT 115
Cdd:cd15225    7 FLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGT 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd15225   87 ECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL----GHRFGG 271
Cdd:cd15225  167 DTSLNEIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLrpksSYSPET 246
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 272 DsiplhvhILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15225  247 D-------KLLSLFYTVVTPMLNPIIYSLRNKEVKG 275
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
37-298 1.53e-69

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 217.48  E-value: 1.53e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15918    8 LGMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDS 196
Cdd:cd15918   88 NFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFY---MPVFFSSLG-HRFGGD 272
Cdd:cd15918  168 THLNELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYgtvIGVYLSPPSsHSASKD 247
                        250       260
                 ....*....|....*....|....*.
gi 268607585 273 SIPlhvhillANLYVVLPPSLNPIIY 298
Cdd:cd15918  248 SVA-------AVMYTVVTPMLNPFIY 266
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
36-307 1.40e-65

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 207.46  E-value: 1.40e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVT 115
Cdd:cd15235    8 FLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd15235   88 DSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCS 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFY---MPVFFSSLGHRFGGD 272
Cdd:cd15235  168 DTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYgtiIGVYFQPSSSYSADK 247
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 268607585 273 SIPLHVhillanLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15235  248 DRVATV------MYTVVTPMLNPFIYSLRNKDVKG 276
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
36-305 2.80e-62

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 198.93  E-value: 2.80e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVT 115
Cdd:cd15421    7 ILLIFLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd15421   87 ECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKLSCA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRFGGDSIP 275
Cdd:cd15421  167 DTSAYETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYM--RPGSYHSP 244
                        250       260       270
                 ....*....|....*....|....*....|
gi 268607585 276 LHVHILLAnLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15421  245 EQDKVVSV-FYTILTPMLNPLIYSLRNKEV 273
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
32-298 7.11e-62

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 197.73  E-value: 7.11e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15230    3 LFVLFLLIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15230   83 FGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF----SSLGH 267
Cdd:cd15230  163 LSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFmylrPSSSY 242
                        250       260       270
                 ....*....|....*....|....*....|.
gi 268607585 268 RFGGDSIplhvhilLANLYVVLPPSLNPIIY 298
Cdd:cd15230  243 SLDQDKV-------VSVFYTVVIPMLNPLIY 266
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
37-307 9.91e-62

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 197.80  E-value: 9.91e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15234    8 LSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLD 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLAC-D 195
Cdd:cd15234   88 NFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACsD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSiFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFY---MPVFFSSLGHRFGGD 272
Cdd:cd15234  168 TLINNILIYLATVIFG-GIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYgtgLGVYISSAVTHSSRK 246
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 268607585 273 SIPLHVhillanLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15234  247 TAVASV------MYTVVTPMLNPFIYSLRNKDMKG 275
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
30-298 1.49e-61

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 196.94  E-value: 1.49e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15912    1 ILLFLLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15912   81 FFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF----SSL 265
Cdd:cd15912  161 LKLSCSDTRLIELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFmyvrPSQ 240
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 266 GHRFGGDSIPlhvhillANLYVVLPPSLNPIIY 298
Cdd:cd15912  241 SSSLDLNKVV-------ALLNTVVTPLLNPFIY 266
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
32-298 1.69e-61

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 196.73  E-value: 1.69e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15237    3 LFILFLLIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15237   83 LGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL----GH 267
Cdd:cd15237  163 LACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMrphsTH 242
                        250       260       270
                 ....*....|....*....|....*....|.
gi 268607585 268 RFGGDSiplhvhiLLANLYVVLPPSLNPIIY 298
Cdd:cd15237  243 SPDQDK-------MISVFYTIVTPMLNPLIY 266
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
39-298 4.10e-61

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 195.75  E-value: 4.10e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15227   10 IYLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELA 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15227   90 LLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLLKLSCSDTY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRFGGDSiPLHV 278
Cdd:cd15227  170 LNEIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYL--KPPSDS-PSLL 246
                        250       260
                 ....*....|....*....|
gi 268607585 279 HILLANLYVVLPPSLNPIIY 298
Cdd:cd15227  247 DLLLSVFYSVVPPTLNPIIY 266
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
30-301 4.75e-61

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 195.67  E-value: 4.75e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15914    1 LLLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15914   81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRF 269
Cdd:cd15914  161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYL--RL 238
                        250       260       270
                 ....*....|....*....|....*....|..
gi 268607585 270 gGDSIPLHVHILLANLYVVLPPSLNPIIYGVK 301
Cdd:cd15914  239 -SKSYSLDYDRAIAVVYAVLTPFFNPIIYSLR 269
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
32-307 4.72e-60

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 193.25  E-value: 4.72e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15231    3 LFLIFLIIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15231   83 FVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGg 271
Cdd:cd15231  163 LSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSG- 241
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 272 dsIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15231  242 --YSLDKDTLISVLYSIVTPMLNPIIYSLRNKEVKG 275
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
34-298 7.15e-60

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 192.70  E-value: 7.15e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIFSM----YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15911    1 ILLFLLflviYIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15911   81 GSLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFY---MPVFFSSLG 266
Cdd:cd15911  161 LKLSCSDTSLVELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYgtlIIVYVVPST 240
                        250       260       270
                 ....*....|....*....|....*....|..
gi 268607585 267 HRfggdsiPLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15911  241 NT------SRDLNKVFSLFYTVLTPLVNPLIY 266
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
39-298 2.56e-59

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 191.28  E-value: 2.56e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15431   10 VYLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVyRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15431   90 LLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVLTM-PLHFCGPNVINHFFCEVQALLKLACSDTS 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFG----GDSI 274
Cdd:cd15431  169 LNEILMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKsssdQDKI 248
                        250       260
                 ....*....|....*....|....
gi 268607585 275 plhvhilLANLYVVLPPSLNPIIY 298
Cdd:cd15431  249 -------ISVFYGVVTPMLNPLIY 265
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
30-307 6.52e-59

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 190.60  E-value: 6.52e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15419    1 VLLFLLFLVIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15419   81 SLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRF 269
Cdd:cd15419  161 LKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYA--QP 238
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 270 GGDSIPLHVHIlLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15419  239 GAVSSPEQSKV-VSVFYTLVIPMLNPLIYSLRNKDVKE 275
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
36-307 1.67e-58

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 189.46  E-value: 1.67e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSM-YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFV 114
Cdd:cd15420    6 LFSLlYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAH 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 115 TESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLAC 194
Cdd:cd15420   86 TECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 195 DSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSI 274
Cdd:cd15420  166 ADTWINEILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSAE 245
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 275 PLHVhilLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15420  246 QEKI---LSLFYSLFNPMLNPLIYSLRNKQVKG 275
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
40-307 2.88e-57

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 186.26  E-value: 2.88e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15229   11 YLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15229   91 LSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCSDTFA 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIplhVH 279
Cdd:cd15229  171 NKMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASSSV---LD 247
                        250       260
                 ....*....|....*....|....*...
gi 268607585 280 ILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15229  248 RVFSIQYSILTPMLNPIIYSLKNKEVKA 275
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
40-298 4.27e-56

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 182.89  E-value: 4.27e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15915   11 YLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAML 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15915   91 LAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDTSL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIP-SQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDsipLHV 278
Cdd:cd15915  171 NLWLLNIVTGSIALGTFILTLLSYIYIISFLLLKVrSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDS---LEQ 247
                        250       260
                 ....*....|....*....|
gi 268607585 279 HILLANLYVVLPPSLNPIIY 298
Cdd:cd15915  248 DRIVALLYTVVTPVLNPLIY 267
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
37-307 1.32e-55

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 181.84  E-value: 1.32e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15409    8 LAIYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDS 196
Cdd:cd15409   88 CFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKISCTD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDsipL 276
Cdd:cd15409  168 PSINELVLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYA---L 244
                        250       260       270
                 ....*....|....*....|....*....|.
gi 268607585 277 HVHILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15409  245 DQDMMDSLFYTIVIPLLNPFIYSLRNKEVID 275
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
40-298 2.68e-55

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 180.94  E-value: 2.68e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15224   11 YVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15224   91 LAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDMSL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGdsiPLHVH 279
Cdd:cd15224  171 AELVDFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAIS---SFDSN 247
                        250
                 ....*....|....*....
gi 268607585 280 ILLANLYVVLPPSLNPIIY 298
Cdd:cd15224  248 KLVSVLYTVVTPLLNPIIY 266
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
34-307 6.05e-55

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 180.21  E-value: 6.05e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIFSM----YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15411    1 VPLFVLflviYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15411   81 IALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRf 269
Cdd:cd15411  161 LKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPS- 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 270 ggDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15411  240 --SSYSLGQDKVASVFYTVVIPMLNPLIYSLRNKEVKN 275
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
40-307 1.61e-54

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 178.99  E-value: 1.61e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15417   11 YLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15417   91 LAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLSCSDTFI 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF----SSLGHRFGGDSIp 275
Cdd:cd15417  171 SQVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFvylrPSSSHSQDQDKV- 249
                        250       260       270
                 ....*....|....*....|....*....|..
gi 268607585 276 lhvhilLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15417  250 ------ASVFYTVVIPMLNPLIYSLRNKEIKD 275
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
37-298 2.34e-54

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 178.61  E-value: 2.34e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15232    8 LFLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDS 196
Cdd:cd15232   88 LLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCSD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFS----SLGHRFGGD 272
Cdd:cd15232  168 TSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTyirpSSSYSPEKD 247
                        250       260
                 ....*....|....*....|....*.
gi 268607585 273 SIplhvhilLANLYVVLPPSLNPIIY 298
Cdd:cd15232  248 KV-------VAVLYSVVTPTLNPLIY 266
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
32-298 4.67e-54

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 177.82  E-value: 4.67e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15947    3 LFVVVLIFYLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLW 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15947   83 LGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL--GHRF 269
Cdd:cd15947  163 LACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLqpPSSY 242
                        250       260
                 ....*....|....*....|....*....
gi 268607585 270 GGDSIPlhvhiLLANLYVVLPPSLNPIIY 298
Cdd:cd15947  243 SQDQGK-----FISLFYTVVTPTLNPLIY 266
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
32-307 8.18e-54

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 177.56  E-value: 8.18e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSM----YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMF 107
Cdd:cd15406    8 LQLPLFLLflgiYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 108 FLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHM 187
Cdd:cd15406   88 FFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDNVINHYFCDIL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 188 GIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGH 267
Cdd:cd15406  168 PLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKP 247
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 268607585 268 RFGGDSIPLHVHILlanLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15406  248 SSSSSMTQEKVSSV---FYTTVIPMLNPLIYSLRNKDVKN 284
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
30-307 1.34e-53

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 176.82  E-value: 1.34e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15429    1 LGLFVLFLVMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15429   81 LALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRf 269
Cdd:cd15429  161 VRLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPR- 239
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 270 GGDSIPLHVHILLanLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15429  240 SGSSALQEKMISL--FYAVVTPMLNPLIYSLRNKEVKG 275
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
40-307 2.25e-53

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 176.05  E-value: 2.25e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15412   11 YLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYM 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15412   91 LAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCSDTYV 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDsipLHVH 279
Cdd:cd15412  171 KETAMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEES---VEQS 247
                        250       260
                 ....*....|....*....|....*...
gi 268607585 280 ILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15412  248 KIVAVFYTFVSPMLNPLIYSLRNKDVKQ 275
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
36-298 3.04e-53

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 175.64  E-value: 3.04e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVT 115
Cdd:cd15430    7 CLIMYLVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGST 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd15430   87 ECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLACV 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIp 275
Cdd:cd15430  167 DISLNEIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQI- 245
                        250       260
                 ....*....|....*....|...
gi 268607585 276 lhVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15430  246 --SDKLITLFYGVVTPMLNPIIY 266
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
38-306 4.27e-53

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 175.34  E-value: 4.27e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  38 SMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTES 117
Cdd:cd15236    9 AMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDS 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 118 GILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSI 197
Cdd:cd15236   89 FLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCSST 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIPlh 277
Cdd:cd15236  169 SLNELVIFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSSDK-- 246
                        250       260
                 ....*....|....*....|....*....
gi 268607585 278 vHILLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15236  247 -DIVASVMYTVVTPMLNPFIYSLRNRDIK 274
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
30-305 1.88e-52

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 173.77  E-value: 1.88e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15424    1 ILLFVVILIIYLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15424   81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFfsSLGHRF 269
Cdd:cd15424  161 LKLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVI--SMYMRP 238
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 270 GGDSIPLHvHILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15424  239 RSGSTPDR-DKQIAVFYIVITPLLNPIIYTLRNKDV 273
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
39-305 4.38e-52

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 173.28  E-value: 4.38e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15408   23 IYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKVISFTGCLTQLYFYAVFATTECY 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15408  103 LLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGSNVINHFFCDGPPLLALSCSDTS 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHrfgGDSIPLHV 278
Cdd:cd15408  183 LNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTLFYGSLAFMYLRP---SSRYSLDL 259
                        250       260
                 ....*....|....*....|....*..
gi 268607585 279 HILLANLYVVLPPSLNPIIYGVKTKQI 305
Cdd:cd15408  260 DKVASVFYTVVIPMLNPLIYSLRNKEV 286
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
37-298 5.24e-52

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 172.40  E-value: 5.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15939    8 LLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDS 196
Cdd:cd15939   88 IFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACTD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVniyYGLIVALFSIFLDVV---LIIVSYARILCAVyRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghrfgGDS 273
Cdd:cd15939  168 TYV---IGLLVVANSGLICLLsflILLISYIVILYSL-RTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYM-----RPV 238
                        250       260
                 ....*....|....*....|....*
gi 268607585 274 IPLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15939  239 TTFPIDKVVAVFYTIITPMLNPLIY 263
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
32-307 7.34e-52

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 172.12  E-value: 7.34e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQM-FFLH 110
Cdd:cd15413    3 LFGLFLVIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLaFFLT 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIfVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIA 190
Cdd:cd15413   83 FI-ISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 191 RLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL----G 266
Cdd:cd15413  162 ALSCSDTHEKELIILIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLqpksS 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 268607585 267 HRFGGDSIPlhvhillANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15413  242 HSLDTDKMA-------SVFYTLVIPMLNPLIYSLRNKEVKD 275
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
32-306 8.31e-52

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 171.85  E-value: 8.31e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15228    3 LFVLFLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15228   83 LGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLgHRFGG 271
Cdd:cd15228  163 LACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYT-QPTPS 241
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 268607585 272 DSIPLHVHILLanlyVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15228  242 PVLVTPVQIFN----NVVTPMLNPLIYTLRNKEVK 272
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
17-307 2.39e-51

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 171.39  E-value: 2.39e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  17 YTMIGIPGLEDAHIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRS 96
Cdd:cd15943    2 FILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  97 ISFASCVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGK 176
Cdd:cd15943   82 ISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCGS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 177 SIIRHSYCEHMGIARLACDSIKVNiyyGLIVALFSIFLDVVL---IIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVI 253
Cdd:cd15943  162 NVINHFFCDVPPLLKLSCSDTHVN---EIVLFAFAIFLGIFTsleILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAV 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 268607585 254 LLFYMPVFF----SSLGHRFGGDSIplhvhilLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15943  239 TIFYGTTLFmylrPSSSYSLDQDKV-------VSVFYTVVIPMLNPLIYSLRNKEVKD 289
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
29-307 2.11e-50

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 168.99  E-value: 2.11e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  29 HIWLSIPIF----SMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVS 104
Cdd:cd15410    9 YPELQVPLFlvflAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKAISYSGCML 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 105 QMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMgiAAVTRSFFICFPLIFLVY--RLTYCGKSIIRHS 182
Cdd:cd15410   89 QFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLL--VAGSYLWGIVCSLIHTCGllRLSFCGSNVINHF 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 183 YCEHMGIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF 262
Cdd:cd15410  167 FCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITIFHGTILF 246
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 268607585 263 SSLghrfggdsIPLHVHILLAN-----LYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15410  247 MYC--------RPSSSYSLDTDkvasvFYTVVIPMLNPLIYSLRNKDVKD 288
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
39-307 2.22e-50

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 168.31  E-value: 2.22e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15416   10 IYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15416   90 LLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCSDIR 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFggdSIPLHV 278
Cdd:cd15416  170 LAKILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNS---SYSMDQ 246
                        250       260
                 ....*....|....*....|....*....
gi 268607585 279 HILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15416  247 NKVVSVFYMVVIPMLNPLIYSLRNKEVKG 275
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
32-307 2.27e-50

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 168.33  E-value: 2.27e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15434    3 LSVVVLIFYLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15434   83 LGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMPALIK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIkvNIYYGLIVALFSIFLDV--VLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGhrf 269
Cdd:cd15434  163 LACVDT--TAYEATIFALGVFILLFplSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQ--- 237
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 270 GGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15434  238 PKNSVSQDQGKFLTLFYTIVTPSLNPLIYTLRNKDVKG 275
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
30-309 8.22e-50

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 167.22  E-value: 8.22e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15414    1 IPLFLLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15414   81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGhrf 269
Cdd:cd15414  161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVR--- 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 268607585 270 GGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQERV 309
Cdd:cd15414  238 PSSSSSLDLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
40-306 4.15e-48

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 162.65  E-value: 4.15e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15233   11 YIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15233   91 LTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPLFQLSCSSTHL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NiyyGLIVALFSIFLDV---VLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRFGGDSIPL 276
Cdd:cd15233  171 N---ELLLFVFAFFMALapcVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYM--RLGSVYSSD 245
                        250       260       270
                 ....*....|....*....|....*....|
gi 268607585 277 HVHIlLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15233  246 KDKV-IGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
34-307 5.68e-48

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 162.20  E-value: 5.68e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIFSM----YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15407    1 IPLFIIftliYLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15407   81 VVFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF----SSL 265
Cdd:cd15407  161 LALSCSDIHISEIVLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFmylqPSS 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 268607585 266 GHRFGGDSIplhvhilLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15407  241 SHSMDTDKM-------ASVFYTMVIPMLNPLVYSLRNKEVKS 275
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
32-301 1.73e-47

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 160.72  E-value: 1.73e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15946    3 LFAVFLLIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15946   83 LGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRFGG 271
Cdd:cd15946  163 LACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYM--RPGS 240
                        250       260       270
                 ....*....|....*....|....*....|
gi 268607585 272 DSIPlHVHILLANLYVVLPPSLNPIIYGVK 301
Cdd:cd15946  241 NYSP-ERDKKISLFYNVFTALLNPVIYSLR 269
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
36-298 1.81e-47

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 160.45  E-value: 1.81e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSM-YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFV 114
Cdd:cd15226    6 FFSLfYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGG 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 115 TESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLAC 194
Cdd:cd15226   86 SEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLAC 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 195 -DSIKVniyyGLIVALFSIFLDVV---LIIVSYARILCAVyRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghrfg 270
Cdd:cd15226  166 tDTYVL----ELMVVANSGLISLVcflLLLISYIVILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYV----- 235
                        250       260
                 ....*....|....*....|....*...
gi 268607585 271 GDSIPLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15226  236 WPFSTFPVDKFLAVFYTVITPLLNPIIY 263
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
17-311 2.95e-47

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 160.68  E-value: 2.95e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  17 YTMIGIPGLEDAHIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRS 96
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  97 ISFASCVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGK 176
Cdd:cd15945   81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 177 SIIRHSYCEHMGIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLF 256
Cdd:cd15945  161 NTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVGLF 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 268607585 257 YMPVFFSSLGhrfGGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQERVVQ 311
Cdd:cd15945  241 YGTLLFMYLR---PSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
37-306 2.99e-47

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 160.31  E-value: 2.99e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFW-FQDRSISFASCVSQMFFLHFIFVT 115
Cdd:cd15916    8 LIIYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYFFHFLGST 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd15916   88 ECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLACA 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL--GHRFGGDS 273
Cdd:cd15916  168 DTTINELVIFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLrpGSKEALDG 247
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 274 IPlhvhillANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15916  248 VI-------AVFYTVVTPLLNPLIYTLRNKEVK 273
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
40-307 1.17e-46

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 158.79  E-value: 1.17e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15418   12 YILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15418   92 LAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDTRV 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFF----SSLGHRFGGDSIp 275
Cdd:cd15418  172 YELILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFiysrPSSSHTPDRDKV- 250
                        250       260       270
                 ....*....|....*....|....*....|..
gi 268607585 276 lhvhilLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15418  251 ------VALFYTVVNPLLNPLIYSLRNKDVKE 276
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
34-306 1.93e-46

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 158.35  E-value: 1.93e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIF----SMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15405    1 IPLFflflGIYVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15405   81 CFFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMpvfFSSLGHRF 269
Cdd:cd15405  161 LQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFG---SGAFMYLK 237
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 268607585 270 GGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15405  238 PSSVGSVNQGKVSSVFYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
39-306 1.21e-45

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 156.05  E-value: 1.21e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15942   10 VYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15942   90 LYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLACADTA 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRFGGDSIPLHV 278
Cdd:cd15942  170 FNELVTFIDIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYL--RPGSQDPLDGV 247
                        250       260
                 ....*....|....*....|....*...
gi 268607585 279 hilLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15942  248 ---VAVFYTTVTPLLNPVIYTLRNKEMK 272
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
39-298 1.92e-45

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 155.29  E-value: 1.92e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15940   10 LYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIK 198
Cdd:cd15940   90 LLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTDTY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VniyYGLIVALFSIFLDV---VLIIVSYARILCAVYRIpSQDTRLKALSTCGSHVCVILLFYMPVFFSslghrFGGDSIP 275
Cdd:cd15940  170 L---IDILIVSNSGLISLvcfVALLGSYIVILVSLRKR-STEGRRKALSTCASHLTVVTLFFGPCIFI-----YTRPSTS 240
                        250       260
                 ....*....|....*....|...
gi 268607585 276 LHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15940  241 FSEDKVVSVFYTVVTPLLNPIIY 263
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
32-307 3.55e-45

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 154.88  E-value: 3.55e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLhF 111
Cdd:cd15415    3 LFMLFLLIYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFF-A 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLS-MAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIA 190
Cdd:cd15415   82 VFVTTEGFLLAvMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 191 RLACDSIKVN----IYYGLIVALFSIFldvvLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSslg 266
Cdd:cd15415  162 KLSCSDTHINelllLTFSGVIAMSTLL----TIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFS--- 234
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 268607585 267 HRFGGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15415  235 YIQPSSQYSLEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKD 275
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
30-306 8.57e-45

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 153.79  E-value: 8.57e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15428    1 ILLFILFLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15428   81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLghRF 269
Cdd:cd15428  161 LKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYM--RP 238
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 268607585 270 GGDSIPLHVHIlLANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15428  239 KSSTSKEYDKM-ISVFYIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
40-307 2.65e-44

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 152.63  E-value: 2.65e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15432   11 YILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKV 199
Cdd:cd15432   91 LAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDTTA 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYmpvFFSSLGHRFGGDSIPLHVH 279
Cdd:cd15432  171 NEAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFY---GTAISMYLQPPSNSSHDRG 247
                        250       260
                 ....*....|....*....|....*...
gi 268607585 280 ILLANLYVVLPPSLNPIIYGVKTKQIQE 307
Cdd:cd15432  248 KMVALFYGIITPMLNPLIYTLRNKDVKE 275
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
17-313 3.16e-44

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 153.02  E-value: 3.16e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  17 YTMIGIPGLEDAHIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRS 96
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  97 ISFASCVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGK 176
Cdd:cd15944   81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 177 SIIRHSYCEHMGIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLF 256
Cdd:cd15944  161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTLF 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 268607585 257 YMPVFFSSLghrfggdsIPLHVHIL-----LANLYVVLPPSLNPIIYGVKTKQIQERVVQLF 313
Cdd:cd15944  241 YGTVIFMYL--------RPTSVYSLdqdkwASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
37-298 3.03e-43

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 149.41  E-value: 3.03e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15936    8 LLVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLAC-D 195
Cdd:cd15936   88 VFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACtD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIvSYARILCAVyRIPSQDTRLKALSTCGSHVCVILLFYMPVFF--SSLGHRFGGDS 273
Cdd:cd15936  168 TFLLELLMVSNSGLVTLLIFFILLI-SYTVILVKI-RTHVTEGKRKALSTCASQITVVTLIFVPCIYiyARPFQTFPMDK 245
                        250       260
                 ....*....|....*....|....*
gi 268607585 274 IplhvhilLANLYVVLPPSLNPIIY 298
Cdd:cd15936  246 A-------VSVLYTVITPMLNPMIY 263
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
30-298 1.92e-41

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 144.77  E-value: 1.92e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15913    1 ILLFSFFSVIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTrSFFICFPL-IFLVYRLTYCGKSIIRHSYCEHMG 188
Cdd:cd15913   81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWV-CGFLWFLIpVVLISQLPFCGPNIIDHFLCDPGP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 189 IARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFY---MPVFFSSl 265
Cdd:cd15913  160 LLALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYgsvMVMYVSP- 238
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 266 ghrfgGDSIPLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15913  239 -----GSGNSTGMQKIVTLFYSVVTPLLNPLIY 266
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
32-298 3.67e-41

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 144.14  E-value: 3.67e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIE-HSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLH 110
Cdd:cd15935    3 LFVLVLACYAAILLGNLLIVVTVHADpHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIA 190
Cdd:cd15935   83 FLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVI 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 191 RLAC-DSIKVNIYYGLIVALFSIFLDVVLiIVSYARILCAVyRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15935  163 KLACmDTYVVEVLMVANSGLLSLVCFLVL-LVSYGIILTTL-RGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFS 240
                        250       260
                 ....*....|....*....|....*....
gi 268607585 270 GGdsiplHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15935  241 SS-----SVDKVASVFYTLITPALNPLIY 264
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
37-301 3.51e-38

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 136.16  E-value: 3.51e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15938    8 LLAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAE 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLAC-D 195
Cdd:cd15938   88 MFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACtD 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLiIVSYARILCavyRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLgHRFGGDSIP 275
Cdd:cd15938  168 TCVTELLMVSNSGLISTVCFVVL-VTSYTTILV---TIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYA-RPFSTFPVD 242
                        250       260
                 ....*....|....*....|....*.
gi 268607585 276 LHVHIllanLYVVLPPSLNPIIYGVK 301
Cdd:cd15938  243 KHVSV----LYNVITPMLNPLIYTLR 264
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
39-306 5.45e-38

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 136.13  E-value: 5.45e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHE-PMYFFLTMLALADIFLSTVTIPKVLAIFWFQD-RSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15941   10 IYLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYAFHFLASTE 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 SGILLSMAFDRYVAICYPLRYTTILTPSviIKMGIAAVTRSFFICFPLIF--LVYRLTYCGKSIIRHSYCEHMGIARLAC 194
Cdd:cd15941   90 CFLYTVMAYDRYLAICHPLHYPTAMNRR--MCAGLAGGTWATGATHAAIHtsLTFRLPYCGPCQIAYFFCDIPPVLKLAC 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 195 DSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF--GGD 272
Cdd:cd15941  168 ADTTINELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSsqAGA 247
                        250       260       270
                 ....*....|....*....|....*....|....
gi 268607585 273 SIPlhvhillANLYVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15941  248 GAP-------AVFYTIVTPMLNPFIYTLRNKEVK 274
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
32-306 5.53e-37

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 133.38  E-value: 5.53e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15433    3 LFVVVLIFYLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIAR 191
Cdd:cd15433   83 LGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLK 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 192 LACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSL--GHRF 269
Cdd:cd15433  163 LACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLqpIHRY 242
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 270 GgdsiplHVHILLANL-YVVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15433  243 S------QAHGKFVSLfYTVMTPALNPLIYTLRNKDVK 274
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
38-298 1.17e-35

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 129.86  E-value: 1.17e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  38 SMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTES 117
Cdd:cd15937    9 LFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEM 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 118 GILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACdsi 197
Cdd:cd15937   89 FLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLAC--- 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 kVNIYYGLIVALFS----IFLDVVLIIVSYARILCAVyRIPSQDTRLKALSTCGSHVCVILLFYMPVFFsSLGHRFggDS 273
Cdd:cd15937  166 -TNTYTVELLMFSNsglvILLCFLLLLISYAFLLAKL-RTHSSKGKSKAASTCITHIIIVFVMFGPAIY-IYARPF--RS 240
                        250       260
                 ....*....|....*....|....*
gi 268607585 274 IPLHVhiLLANLYVVLPPSLNPIIY 298
Cdd:cd15937  241 FPMDK--VVAVFHTVIFPLLNPMIY 263
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
46-298 2.66e-26

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 104.69  E-value: 2.66e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585   46 GNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLA-IFWFQDRSISFASCVSQMFFLHFIFVTESGILLSMA 124
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  125 FDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSiirHSYCEHMGIARLACdsikvNIYYG 204
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDFPEDLSK-----PVSYT 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  205 LIVALFSIFLDVVLIIVSYARILCAVYRIPSQD-------TRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIPLH 277
Cdd:pfam00001 153 LLISVLGFLLPLLVILVCYTLIIRTLRKSASKQkssertqRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELSR 232
                         250       260
                  ....*....|....*....|....
gi 268607585  278 VHILLANLYVVLPPS---LNPIIY 298
Cdd:pfam00001 233 LLDKALSVTLWLAYVnscLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
41-301 3.24e-20

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 88.50  E-value: 3.24e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd00637   10 VVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCehmgiarlacdSIKVN 200
Cdd:cd00637   90 TAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWP-----------DLTLS 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 201 IYYGLIVALFSIFLDVVLIIVSYARILCAVYR--------------IPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLG 266
Cdd:cd00637  159 KAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRhrrrirssssnssrRRRRRRERKVTKTLLIVVVVFLLCWLPYFILLLL 238
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 267 HRFGGDSIPLHVHI-LLANLYVVLPPSLNPIIYGVK 301
Cdd:cd00637  239 DVFGPDPSPLPRILyFLALLLAYLNSAINPIIYAFF 274
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
31-300 3.43e-14

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 71.05  E-value: 3.43e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-----KVLAIFWFQDRSISFASCvsq 105
Cdd:cd14967    1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPfsavyTLLGYWPFGPVLCRFWIA--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 106 mffLHFIFVTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSiirHSYC 184
Cdd:cd14967   78 ---LDVLCCTASILnLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSVV---DCEC 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 185 EHMgiarlacdsikVNIYYGLIVALFSIFLDVVLIIVSYARIlcavYRIPSQDtrLKALSTCGSHVCVILLFYMPVFFSS 264
Cdd:cd14967  152 EFT-----------PNKIYVLVSSVISFFIPLLIMIVLYARI----FRVARRE--LKAAKTLAIIVGAFLLCWLPFFIIY 214
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 268607585 265 LGHRF-GGDSIPLHVHILLANLyVVLPPSLNPIIYGV 300
Cdd:cd14967  215 LVSAFcPPDCVPPILYAVFFWL-GYLNSALNPIIYAL 250
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
30-309 1.10e-09

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 58.38  E-value: 1.10e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCvSQMFFL 109
Cdd:cd14993    1 IVLIVLYVVVFLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLC-KAVPYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLS-MAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFlVYRLTYCGKSIIrhsycehMG 188
Cdd:cd14993   80 QGVSVSASVLTLVaISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLV-VYELEEIISSEP-------GT 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 189 IARLAC----DSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVY-RIPSQDTRLKALSTCGSH-----------VCV 252
Cdd:cd14993  152 ITIYICtedwPSPELRKAYNVALFVVLYVLPLLIISVAYSLIGRRLWrRKPPGDRGSANSTSSRRIlrskkkvarmlIVV 231
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 268607585 253 ILLF---YMPVFFSSLGHRFGGDSIPLHVHILLANLYVVL-----PPSLNPIIYGVKTKQIQERV 309
Cdd:cd14993  232 VVLFalsWLPYYVLSILLDFGPLSSEESDENFLLILPFAQllgysNSAINPIIYCFMSKKFRRGF 296
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
32-299 3.70e-09

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 56.79  E-value: 3.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNtfLILLISIEH--SLHEPMYFFLTMLALADIFLSTVTIP----KVLAIFWFqdrsisFASCVSQ 105
Cdd:cd15055    3 LYIVLSSISLLTVLGN--LLVIISISHfkQLHTPTNLLLLSLAVADFLVGLLVMPfsmiRSIETCWY------FGDTFCK 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 106 MF-FLHFIFVTES-GILLSMAFDRYVAICYPLRYTTiltpsviiKMGIAAVTRSFFIC--FPLIFlVYRLTYCG---KSI 178
Cdd:cd15055   75 LHsSLDYILTSASiFNLVLIAIDRYVAVCDPLLYPT--------KITIRRVKICICLCwfVSALY-SSVLLYDNlnqPGL 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 179 IRHSYCehMGiarlACdSIKVNIYYGLIVALFSIFLDVVLIIVSYARI-------------------LCAVYRIPSQDTR 239
Cdd:cd15055  146 IRYNSC--YG----EC-VVVVNFIWGVVDLVLTFILPCTVMIVLYMRIfvvarsqarairshtaqvsLEGSSKKVSKKSE 218
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 268607585 240 LKALSTCGSHVCVILLFYMPVFFSSL-GHRFGGDSIPLHVHILLanlyVVLPPSLNPIIYG 299
Cdd:cd15055  219 RKAAKTLGIVVGVFLLCWLPYYIVSLvDPYISTPSSVFDVLIWL----GYFNSCLNPLIYA 275
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
41-309 5.86e-09

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 56.13  E-value: 5.86e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd15001   11 VLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVLTL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMgiarlaCDSIKVN 200
Cdd:cd15001   91 TAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILASPVLFGQGLVRYESENGVTVYHCQKA------WPSTLYS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 201 IYYGLIVALFSIFLDVVLIIVSYARilcavyripsqDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDS---IPLH 277
Cdd:cd15001  165 RLYVVYLAIVIFFIPLIVMTFAYAR-----------DTRKQVIKMLISVVVLFAVCWGPLLIDNLLVSFDVIStlhTQAL 233
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 278 VHILLA-NLYVVLPPSLNPIIYGVKTKQIQERV 309
Cdd:cd15001  234 KYMRIAfHLLSYANSCINPIIYAFMSKNFRSSF 266
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
41-147 7.93e-09

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 55.72  E-value: 7.93e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCvsqMFFLHFIFV-TESGI 119
Cdd:cd14968   12 VLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIP--LAILISLGLPTNFHGC---LFMACLVLVlTQSSI 86
                         90       100       110
                 ....*....|....*....|....*....|
gi 268607585 120 --LLSMAFDRYVAICYPLRYTTILTPSVII 147
Cdd:cd14968   87 fsLLAIAIDRYLAIKIPLRYKSLVTGRRAW 116
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
39-166 2.42e-08

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 54.28  E-value: 2.42e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNtfLILLISIEH--SLHEPMYFFLTMLALADIFLSTVTIP-----KVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15312   10 AILLTVFGN--LMVIISISHfkQLHSPTNFLILSLAITDFLLGFLVMPysmvrSVESCWYFGDLFCKIHSSLDMMLSTTS 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 268607585 112 IFVtesgiLLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF 166
Cdd:cd15312   88 IFH-----LCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFGVVF 137
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
41-142 2.84e-08

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 54.17  E-value: 2.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI-FWFQdrsISFASCvsqMFFLHFIFV-TESG 118
Cdd:cd15069   12 ALSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITIsLGFC---TDFHSC---LFLACFVLVlTQSS 85
                         90       100
                 ....*....|....*....|....*.
gi 268607585 119 I--LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15069   86 IfsLLAVAVDRYLAIKVPLRYKSLVT 111
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
40-241 2.84e-08

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 53.99  E-value: 2.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd15012   10 FCCCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVHSLSYTASIGI 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLI----FLVYRLTYCGKSIIRHSYCEHMGIARLacd 195
Cdd:cd15012   90 LVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFvfsqTVEILVTQDGQEEEICVLDREMFNSKL--- 166
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 268607585 196 sikvniyYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLK 241
Cdd:cd15012  167 -------YDTINFIVWYLIPLLIMTVLYSKISIVLWKSSSIEARRK 205
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
36-298 4.25e-08

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 53.45  E-value: 4.25e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMY-IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFV 114
Cdd:cd15096    6 IFGLIfIVGLIGNSLVILVVLSNQQMRSTTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDVWCKIVQYLVYVTAY 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 115 TESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPlIFLVYRLTYCGKSIIRHSYCEHMGIARLAC 194
Cdd:cd15096   86 ASVYTLVLMSLDRYLAVVHPITSMSIRTERNTLIAIVGIWIVILVANIP-VLFLHGVVSYGFSSEAYSYCTFLTEVGTAA 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 195 DSIKVNIYyglivaLFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSH------VCVILLF---YMPVFFSSL 265
Cdd:cd15096  165 QTFFTSFF------LFSYLIPLTLICVLYMLMLRRLRRQKSPGGRRSAESQRGKRrvtrlvVVVVVVFaicWLPIHIILL 238
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 268607585 266 GHRFGGDSI--PLHVHILLANLYVVLPPSLNPIIY 298
Cdd:cd15096  239 LKYYGVLPEtvLYVVIQILSNCLAYGNSCVNPILY 273
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
41-232 1.66e-07

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 51.86  E-value: 1.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISiEHSLHEPMYFFLTMLALADIFLSTVTIP----KVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd14978   12 IFGIIGNILNLVVLT-RKSMRSSTNVYLAALAVSDILVLLSALPlfllPYIADYSSSFLSYFYAYFLPYIYPLANTFQTA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 117 S-GILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACD 195
Cdd:cd14978   91 SvWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYVIPTLLRQNETY 170
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 268607585 196 SIKvniYYGLIVALFSIFLDVVLIIVSYARILCAVYR 232
Cdd:cd14978  171 LLK---YYFWLYAIFVVLLPFILLLILNILLIRALRK 204
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
32-228 2.21e-07

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 51.28  E-value: 2.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYI-VAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAiFWFQDRSISFAscvsqMFFLH 110
Cdd:cd15394    2 LIIPLYSLVVlVGVVGNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVPLTLA-YAFEPRGWVFG-----RFMCY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTESGI-------LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVtrSFFICFPLIFLVYRLTYCGKS-IIRHS 182
Cdd:cd15394   76 FVFLMQPVTvyvsvftLTAIAVDRYYVTVYPLRRRISRRTCAYIVAAIWLL--SCGLALPAAAHTYYVEFKGLDfSICEE 153
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 268607585 183 YCEHMGIARLAcdsikvniyYGLIVALFSIFLDVVLIIVSYARILC 228
Cdd:cd15394  154 FWFGQEKQRLA---------YACSTLLITYVLPLLAISLSYLRISV 190
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
30-307 2.25e-07

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 51.44  E-value: 2.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd14969    1 YVLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF---LVYRLTYCGKSIIRHSyceh 186
Cdd:cd14969   81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFIWLYGLFWALPPLFGwssYVPEGGGTSCSVDWYS---- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 187 mgiarlacdSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGS----------HVCVILLF 256
Cdd:cd14969  157 ---------KDPNSLSYIVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKRAARRKNSAITKRtkkaekkvakMVLVMIVA 227
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 268607585 257 YM----P----VFFSSLGhrfGGDSIPLHVHI---LLANLYVVlppsLNPIIYGVKTKQIQE 307
Cdd:cd14969  228 FLiawtPyavvSLYVSFG---GESTIPPLLATipaLFAKSSTI----YNPIIYVFMNKQFRR 282
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
41-145 2.85e-07

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 51.01  E-value: 2.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-----KVLAIFWFQDRSISFASCVSQMFFLHFIFVt 115
Cdd:cd15318   12 LIIVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPfstirSVESCWYFGDSFCRLHTCLDTLFCLTSIFH- 90
                         90       100       110
                 ....*....|....*....|....*....|
gi 268607585 116 esgiLLSMAFDRYVAICYPLRYTTILTPSV 145
Cdd:cd15318   91 ----LCFISIDRHCAICDPLLYPSKFTIRV 116
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
39-308 4.86e-07

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 50.47  E-value: 4.86e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15195   10 LFVISAAGNLTVLIQLFRRRRAKSHIQILIMHLALADLMVTFFNMPMDAVWNYTVEWLAGDLMCRVMMFLKQFGMYLSSF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTilTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSyCEHMGIARlacDSIK 198
Cdd:cd15195   90 MLVVIALDRVFAILSPLSANQ--ARKRVKIMLTVAWVLSALCSIPQSFIFSVLRKMPEQPGFHQ-CVDFGSAP---TKKQ 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 199 VNIYYgLIVALFSIFLDVVLIIVSYARILCAVYRIPSQD------------------TRLKALSTCGSHVCVILLFYMPV 260
Cdd:cd15195  164 ERLYY-FFTMILSFVIPLIITVTCYLLILFEISKMAKRArdtpisnrrrsrtnslerARMRTLRMTALIVLTFIVCWGPY 242
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268607585 261 FFSSLGHRFGGDSI----PLHVHILLANLYvvLPPSLNPIIYGVKTKQIQER 308
Cdd:cd15195  243 YVLGLWYWFDKESIknlpPALSHIMFLLGY--LNPCLHPIIYGVFMKEIRNW 292
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
39-228 5.40e-07

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 50.30  E-value: 5.40e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkVLAIFWFQDRSIsFASCVSQMFFLHF---IFVT 115
Cdd:cd15203   10 IIVLGVVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLP-FTLIYTLTKNWP-FGSILCKLVPSLQgvsIFVS 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 eSGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVtrSFFICFPL-IFLVYRLTYCGKSIIRHSYCehmgiaRLAC 194
Cdd:cd15203   88 -TLTLTAIAIDRYQLIVYPTRPRMSKRHALLIIALIWIL--SLLLSLPLaIFQELSDVPIEILPYCGYFC------TESW 158
                        170       180       190
                 ....*....|....*....|....*....|....
gi 268607585 195 DSIKVNIYYGLIVALFSIFLDVVLIIVSYARILC 228
Cdd:cd15203  159 PSSSSRLIYTISVLVLQFVIPLLIISFCYFRISL 192
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
41-142 7.22e-07

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 49.94  E-value: 7.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIfwfqdrSISF-ASCVSQMFFLHFIFV-TESG 118
Cdd:cd15068   12 VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI------STGFcAACHGCLFIACFVLVlTQSS 85
                         90       100
                 ....*....|....*....|....*.
gi 268607585 119 I--LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15068   86 IfsLLAIAIDRYIAIRIPLRYNGLVT 111
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
39-167 8.16e-07

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 49.54  E-value: 8.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI---FWFQDrsiSFASCVSQMFFLHFIFVT 115
Cdd:cd15196   10 ILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALFNVLPQLIWditYRFYG---GDLLCRLVKYLQVVGMYA 86
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268607585 116 ESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTrSFFICFPLIFL 167
Cdd:cd15196   87 SSYVLVATAIDRYIAICHPLSSHRWTSRRVHLMVAIAWVL-SLLLSIPQLFI 137
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
32-299 1.13e-06

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 49.16  E-value: 1.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIF-----WFQD------RSISFA 100
Cdd:cd15314    3 LYIFLGLISLVTVCGNLLVIISIAHFKQLHTPTNYLILSLAVADLLVGGLVMPPSMVRSvetcwYFGDlfckihSSFDIT 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 101 SCVSQMFFLHFIFVtesgillsmafDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTycgKSIIR 180
Cdd:cd15314   83 LCTASILNLCFISI-----------DRYYAVCQPLLYRSKITVRVVLVMILISWSVSALVGFGIIFLELNIK---GIYYN 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 181 HSYCEHMGIARLACDSikvniyyGLIVALFSIFLDVVLIIVSYARILCAVYR-------------IPSQDTRLKALSTCG 247
Cdd:cd15314  149 HVACEGGCLVFFSKVS-------SVVGSVFSFYIPAVIMLCIYLKIFLVAQRqarsiqsartksgASSSKMERKATKTLA 221
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268607585 248 SHVCVILLFYMPVFFSSLGHRFGGDSIPLHVHILLaNLYVVLPPSLNPIIYG 299
Cdd:cd15314  222 IVMGVFLLCWTPFFLCNIIDPFINYSIPPVLIEVL-NWLGYSNSTLNPFIYA 272
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
40-232 1.14e-06

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 49.28  E-value: 1.14e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQdRSISFASCVSQMFFLHFIFVTESGI 119
Cdd:cd14979   11 FVVGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQ-YPWAFGDGGCKLYYFLFEACTYATV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 L--LSMAFDRYVAICYPLRYTTILTPSVIIKMgIAAVTRSFFICFPLIFLVYRLTYcgKSIIRHSYCEHMGIARLACDSI 197
Cdd:cd14979   90 LtiVALSVERYVAICHPLKAKTLVTKRRVKRF-ILAIWLVSILCAIPILFLMGIQY--LNGPLPGPVPDSAVCTLVVDRS 166
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 268607585 198 KVNIYYGlIVALFSIFLDVVLIIVSYARILCAVYR 232
Cdd:cd14979  167 TFKYVFQ-VSTFIFFVLPMFVISILYFRIGVKLRS 200
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
42-173 1.29e-06

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 49.38  E-value: 1.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  42 VAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFwFQDRSISFASCVSQMF-FLHFIFVTESGI- 119
Cdd:cd15005   13 VSLAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPFVMASV-RHGSGWIYGALSCKVIaFLAVLFCFHSAFt 91
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTY 173
Cdd:cd15005   92 LFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAFPPVFDVGTYTF 145
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
31-249 1.59e-06

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 48.85  E-value: 1.59e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSmyivAVIGNTFLIL-LISIEHSLHEPMYFFLTMLALADIFLSTVTIP----KVLAIFW----FQDRSISFAS 101
Cdd:cd15320    7 FLSVLILS----TLLGNTLVCAaVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPwkavAEIAGFWpfgsFCNIWVAFDI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 102 CVSQMFFLHfifvtesgiLLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICF-PLIFLVYRLTYCGKSIIR 180
Cdd:cd15320   83 MCSTASILN---------LCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFiPVQLNWHKAKPTSFLDLN 153
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 181 HSYcehMGIARLACDSiKVNIYYGLIVALFSIFLDVVLIIVSYARIlcavYRIPS-QDTRLKALSTCGSH 249
Cdd:cd15320  154 ASL---RDLTMDNCDS-SLNRTYAISSSLISFYIPVAIMIVTYTRI----YRIAQkQIRRISALERAAVH 215
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
41-145 1.82e-06

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 48.60  E-value: 1.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP----KVLAIFWFQDR-------SISFASCVSQMFFL 109
Cdd:cd15317   12 LITVSGNLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPfsmiRTVETCWYFGDlfckfhtGLDLLLCTTSIFHL 91
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 268607585 110 HFIfvtesgillsmAFDRYVAICYPLRYTTILTPSV 145
Cdd:cd15317   92 CFI-----------AIDRYYAVCDPLRYPSKITVQV 116
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
31-298 2.22e-06

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 48.60  E-value: 2.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCvSQMFFLH 110
Cdd:cd15058    2 GLLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWC-ELWTSVD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTES-GILLSMAFDRYVAICYPLRYTTILTPS----VIIKMGIAAVTRSFficFPLIFLVYRLTYcGKSIIRHSYCe 185
Cdd:cd15058   81 VLCVTASiETLCVIAVDRYIAITRPLRYQVLLTKRrarvIVCVVWIVSALVSF---VPIMNQWWRAND-PEANDCYQDP- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 186 hmgiarlACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARilcaVYRIPSQDTRL------------------------- 240
Cdd:cd15058  156 -------TCCDFRTNMAYAIASSVVSFYIPLLIMIFVYAR----VFLIATRQLQLidkrrlrfqsecpapqttspegkrs 224
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 268607585 241 --------------KALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIPLHVHILLaNLYVVLPPSLNPIIY 298
Cdd:cd15058  225 sgrrpsrltvvkehKALKTLGIIMGTFTLCWLPFFIANIINVFNRNLPPGEVFLLL-NWLGYINSGLNPIIY 295
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
41-168 2.38e-06

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 48.30  E-value: 2.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVsqMFFLHFIFVTESGI- 119
Cdd:cd15071   12 LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIP--LAIIINIGPQTEFYSCL--MVACPVLILTQSSIl 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 -LLSMAFDRYVAICYPLRYTTILTPSviiKMGIAavtrsFFICFPLIFLV 168
Cdd:cd15071   88 aLLAIAVDRYLRVKIPTRYKSVVTPR---RAAVA-----IAGCWILSFLV 129
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
41-142 2.61e-06

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 48.01  E-value: 2.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSIsfasCVSQMFFLHFIFVTESGI- 119
Cdd:cd15354   12 IISLLENILVILAIVKNKNLHSPMYFFVCSLAVADMLVSVSNAWETITIYLLNNRHL----VIEDAFVRHIDNVFDSLIc 87
                         90       100       110
                 ....*....|....*....|....*....|..
gi 268607585 120 ---------LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15354   88 isvvasmcsLLAIAVDRYVTIFYALRYHNIMT 119
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
37-142 2.77e-06

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 47.87  E-value: 2.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTE 116
Cdd:cd15103    8 LTLGIVSLLENILVILAIAKNKNLHSPMYFFICSLAVADMLVSVSNALETIVIILLNNGYLVPRDSFEQHIDNVIDSMIC 87
                         90       100       110
                 ....*....|....*....|....*....|..
gi 268607585 117 SGI------LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15103   88 SSLlasicsLLAIAVDRYITIFYALRYHSIMT 119
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
32-240 3.79e-06

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 47.79  E-value: 3.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvlaiFWFQdrsisfASCVSQMFFLHF 111
Cdd:cd15393    3 LSILYGIISLVAVVGNFLVIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSIP-----FQFQ------AALLQRWVLPRF 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 I-----FVTESGILLSM------AFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIR 180
Cdd:cd15393   72 McpfcpFVQVLSVNVSVftltviAVDRYRAVIHPLKARCSKKSAKIIILIIWILALLVALPVALALRVEELTDKTNNGVK 151
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 268607585 181 hSYCEHMGIARlacdsiKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVY--RIP--SQDTRL 240
Cdd:cd15393  152 -PFCLPVGPSD------DWWKIYNLYLVCVQYFVPLVIICYAYTRIAVKIWgtKAPgnAQDVRD 208
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
41-309 4.41e-06

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 47.26  E-value: 4.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADiFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd14982   12 ILGLLGNILALWVFLRKMKKRSPTTIYMINLALAD-LLFVLTLPFRIYYYLNGGWWPFGDFLCRLTGLLFYINMYGSILF 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 121 LS-MAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPliFLVYRLTYCGKSIIRHSYCEHMgiarlacDSIKV 199
Cdd:cd14982   91 LTcISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVP--LLLLRSTIAKENNSTTCFEFLS-------EWLAS 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 200 NIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDT----RLKALSTCGSHVCVILLFYMP-----VFFSSLGHRFG 270
Cdd:cd14982  162 AAPIVLIALVVGFLIPLLIILVCYSLIIRALRRRSKQSQksvrKRKALRMILIVLAVFLVCFLPyhvtrILYLLVRLSFI 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 268607585 271 GDSIP-------LHVHILLANLYVVlppsLNPIIYGVKTKQIQERV 309
Cdd:cd14982  242 ADCSArnslykaYRITLCLASLNSC----LDPLIYYFLSKTFRKRL 283
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
31-167 5.14e-06

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 46.92  E-value: 5.14e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-KVLAIFWFQDRSISFASCVSqMFFL 109
Cdd:cd15052    2 WAALLLLLLVIATIGGNILVCLAISLEKRLQNVTNYFLMSLAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLL-WVTL 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSM-AFDRYVAICYPLRYTTILTPS-VIIKMGIAAVTrSFFICFPLIFL 167
Cdd:cd15052   81 DVLFCTASIMHLCTiSLDRYMAIRYPLRTRRNKSRTtVFLKIAIVWLI-SIGISSPIPVL 139
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
41-142 5.37e-06

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 47.08  E-value: 5.37e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFFLhfIFVTESGI- 119
Cdd:cd15070   12 LCAVVGNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIP--LAIVVSLGVTIHFYSCLFMSCLL--VVFTHASIm 87
                         90       100
                 ....*....|....*....|....
gi 268607585 120 -LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15070   88 sLLAIAVDRYLRVKLTVRYRIVTT 111
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
32-300 1.25e-05

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 45.80  E-value: 1.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI----FWfqdrsiSFASCVSQMF 107
Cdd:cd15059    3 ISSIVSVVILLIIVGNVLVIVAVLTSRKLRAPQNWFLVSLAVADILVGLLIMPFSLVNelmgYW------YFGSVWCEIW 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 108 F-LHFIFVTESGILLSM-AFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLvyrltycgksiIRHSYCE 185
Cdd:cd15059   77 LaLDVLFCTASIVNLCAiSLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISLPPLFG-----------WKDEQPW 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 186 HMGIARlaCdSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCvillfYMPVFFSSL 265
Cdd:cd15059  146 HGAEPQ--C-ELSDDPGYVLFSSIGSFYIPLLIMIIVYARIYRAAKRKERRFTLVLGVVMGAFVLC-----WLPFFFTYP 217
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 266 GHRFGGDSiplHVHILLANLYVVL---PPSLNPIIYGV 300
Cdd:cd15059  218 LVVVCKTC---GVPELLFKFFFWLgycNSALNPVIYTI 252
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
39-269 1.36e-05

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 45.81  E-value: 1.36e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15061    9 AIIFTIFGNLLVILAVATTRRLRTITNCYIVSLATADLLVGVLVLP--LAIIRQLLGYWPLGSHLCDFWISLDVLLCTAS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 IL--LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLvyrltycgksiirhsyCEHMGIARLACDS 196
Cdd:cd15061   87 ILnlCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVG----------------PSWHGRRGLGSCY 150
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVyripsqDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15061  151 YTYDKGYRIYSSMGSFFLPLLLMLFVYLRIFRVI------AKERKTAKTLAIVVGCFIVCWLPFFIMYLIEPF 217
7tmA_GPBAR1 cd15905
G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G ...
30-143 1.42e-05

G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G-protein coupled bile acid receptor GPBAR1 is also known as BG37, TGR5 (Takeda G-protein-coupled receptor 5), M-BAR (membrane-type receptor for bile acids), and GPR131. GPBAR1 is highly expressed in the gastrointestinal tract, but also found at many other tissues including liver, colon, heart, skeletal muscle, and brown adipose tissue. GPBAR1 functions as a membrane-bound receptor specific for bile acids, which are the end products of cholesterol metabolism that facilitate digestion and absorption of lipids or fat-soluble vitamins. Bile acids act as liver-specific metabolic signaling molecules and stimulate liver regeneration by activating GPBAR1 and nuclear receptors such as the farnesoid X receptor (FXR). Upon bile acids binding, GPBAR1 activation causes release of the G-alpha(s) subunit and activation of adenylate cyclase. The increase in intracellular cAMP level then stimulates the expression of many genes via the PKA-mediated phosphorylation of cAMP-response element binding protein (CREB). Thus, GPAR1-signalling exerts various biological effects in immune cells, liver, and metabolic tissues. For example, GPBAR1 activation leads to enhanced energy expenditure in brown adipose tissue and skeletal muscle; stimulation of glucagon-like peptide-1 (GLP-1) production in enteroendocrine L-cells; and inhibition of pro-inflammatory cytokine production in macrophages and attenuation of atherosclerosis development. GPBAR1 is a member of the class A rhodopsin-like family of GPCRs, which comprises receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands.


Pssm-ID: 320571 [Multi-domain]  Cd Length: 272  Bit Score: 45.90  E-value: 1.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAvigNTFLILLISIEHSLHEPMYFFLTMLALADIfLSTVTIPkVLAIFWFQDRsISFASCVSQMFFL 109
Cdd:cd15905    2 FWLSVPLSSLIIFA---NLFIILGIACNRKLHNTANYFFLSLLLADL-LTGVALP-FIPGMSNESR-RGYHSCLFVYVAP 75
                         90       100       110
                 ....*....|....*....|....*....|....
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTP 143
Cdd:cd15905   76 NFLFLSFLANLLMVHYERYLCIVYPLQYHNFWVH 109
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
39-226 1.78e-05

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 45.57  E-value: 1.78e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15202   10 IIVFSLFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQYCSVHVSAY 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAavTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARlacdSIK 198
Cdd:cd15202   90 TLTAIAVDRYQAIMHPLKPRISKTKAKFIIAVIW--TLALAFALPHAICSKLETFKYSEDIVRSLCLEDWPER----ADL 163
                        170       180
                 ....*....|....*....|....*...
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARI 226
Cdd:cd15202  164 FWKYYDLALFILQYFLPLLVISFAYARV 191
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
41-309 2.16e-05

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 45.36  E-value: 2.16e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVtipkVLAIFWFQDRSISFASCVSQMFFLHFIFVT---ES 117
Cdd:cd14972   10 VFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIA----FVFTFLSVLLVSLTPSPATWLLRKGSLVLSllaSA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 118 GILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICfpLIFLVYRLtyCGKSIIRhsycehmgiarlACDSI 197
Cdd:cd14972   86 YSLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLA--LLPVLGWN--CVLCDQE------------SCSPL 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KVNIYYG-LIVALFSIFLDVVLIIVSYARILCAVYR-------------IPSQDTRLKALSTCGSHVCVILLFYMPVFFS 263
Cdd:cd14972  150 GPGLPKSyLVLILVFFFIALVIIVFLYVRIFWCLWRhanaiaarqeaavPAQPSTSRKLAKTVVIVLGVFLVCWLPLLIL 229
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 268607585 264 SLGHRFGGDSIPLHVHILLANLYVVLPPSLNPIIYGVKTKQIQERV 309
Cdd:cd14972  230 LVLDVLCPSVCDIQAVFYYFLVLALLNSAINPIIYAFRLKEMRRAV 275
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
36-230 2.29e-05

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 45.42  E-value: 2.29e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMYIV-AVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLA-------IF--WFQDRSISFASCVSQ 105
Cdd:cd15065    5 FLSLIIVlAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVndllgywLFgeTFCNIWISFDVMCST 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 106 MFFLHfifvtesgiLLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLtycgKSIIRHSYCE 185
Cdd:cd15065   85 ASILN---------LCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLPIHLGWHR----LSQDEIKGLN 151
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 268607585 186 HMGIARLACdSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAV 230
Cdd:cd15065  152 HASNPKPSC-ALDLNPTYAVVSSLISFYIPCLVMLLIYSRLYLYA 195
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
32-298 2.65e-05

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 45.04  E-value: 2.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd15067    2 LGVVLSLFCLVTVAGNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMP-FSILHEMTGGYWLFGRDWCDVWHSFD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGI--LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIfLVYRLTYCGKSIIRHSycehmgi 189
Cdd:cd15067   81 VLASTASIlnLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALISFPAI-AWWRAVDPGPSPPNQC------- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 arLACDSIKvniyYGLIVALFSIFLDVVLIIVSYARIlcavYRIPSQDTrlKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15067  153 --LFTDDSG----YLIFSSCVSFYIPLVVMLFTYYRI----YRAAAKEQ--KAAKTLGIVMGVFILCWLPFFVTNILIGF 220
                        250       260       270
                 ....*....|....*....|....*....|.
gi 268607585 270 GGDSIPLHVHILLANLYVV--LPPSLNPIIY 298
Cdd:cd15067  221 CPSNCVSNPDILFPLVTWLgyINSGMNPIIY 251
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
30-298 2.88e-05

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 44.80  E-value: 2.88e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15054    1 GWVAAFLCLIILLTVAGNSLLILLIFTQRSLRNTSNYFLVSLFMSDLMVGLVVMPPAMLNALYGRWVLARDFCPIWYAFD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGI 189
Cdd:cd15054   81 VMCCSASILNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASFLPIELGWHELGHERTLPNLTSGTVEGQ 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLacdsiKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRipsqdtRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15054  161 CRL-----LVSLPYALVASCLTFFLPSGAICFTYCRILLAARK------ALKASLTLGILLGMFFVTWLPFFVANVVQAV 229
                        250       260
                 ....*....|....*....|....*....
gi 268607585 270 GgDSIPLHVHILLANLYVvLPPSLNPIIY 298
Cdd:cd15054  230 C-DCVSPGLFDVLTWLGY-CNSTMNPIIY 256
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
39-306 3.01e-05

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 44.63  E-value: 3.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkVLAIFWFQDRSIsFASCVSQMFFLHFIFVTESG 118
Cdd:cd15064   10 IILATILGNALVIAAILLTRKLHTPANYLIASLAVADLLVAVLVMP-LSAVYELTGRWI-LGQVLCDIWISLDVTCCTAS 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 I--LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFlvyrlTYCGKSIIRHSYCehmgiarlacdS 196
Cdd:cd15064   88 IlhLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLF-----GWRTPDSEDPSEC-----------L 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRipsqdtRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSipl 276
Cdd:cd15064  152 ISQDIGYTIFSTFGAFYIPLLLMLILYWKIYRAAAR------ERKAAKTLGIILGAFIVCWLPFFLVALIVPLCSHC--- 222
                        250       260       270
                 ....*....|....*....|....*....|...
gi 268607585 277 HVHILLANLYVVLPPS---LNPIIYGVKTKQIQ 306
Cdd:cd15064  223 WIPLALKSFFLWLGYFnslINPLIYTFFNKDFR 255
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
41-306 3.30e-05

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 44.50  E-value: 3.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI----FWFQDR-------SISFASCVSQMFfl 109
Cdd:cd15326   12 LFAIVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLeilgYWVFGRifcdiwaAVDVLCCTASIL-- 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 hfifvtesgILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFlvyrltycgksiirhSYCEHMGI 189
Cdd:cd15326   90 ---------SLCAISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIGPLL---------------GWKEPAPP 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 ARLACDsIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDtrlKALSTCGSHVCVILLFYMPVFFS-SLGHR 268
Cdd:cd15326  146 DDKVCE-ITEEPFYALFSSLGSFYIPLIVILVMYCRVYIVALKFSREK---KAAKTLGIVVGMFILCWLPFFIAlPLGSL 221
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 269 FGGDSIPLHVHILLANLYvVLPPSLNPIIYGVKTKQIQ 306
Cdd:cd15326  222 FSHLKPPETLFKIIFWLG-YFNSCLNPIIYPCSSKEFK 258
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
39-263 3.32e-05

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 44.54  E-value: 3.32e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLA----IFWFqdrsisFASCVSQMFF-LHFIF 113
Cdd:cd15323   10 LIVFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelmGYWY------FGQVWCNIYLaLDVLF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 114 VTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTycgksiirhsycehMGIARL 192
Cdd:cd15323   84 CTSSIVhLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDP--------------EGDVYP 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 268607585 193 ACdSIKVNIYYGLIVALFSIFLDVVLIIVSYARIlcavYRIPSqdTRLKALSTCGSHVC-VILLFYMPVFFS 263
Cdd:cd15323  150 QC-KLNDETWYILSSCIGSFFAPCLIMILVYIRI----YRVAK--AREKRFTFVLAVVMgVFVVCWFPFFFS 214
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
41-142 4.70e-05

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 44.11  E-value: 4.70e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkVLAIFWFQDRSIsFASCVSQMFFLHFIFVTESGI- 119
Cdd:cd15325   12 LFGVLGNILVILSVACHRHLQTVTHYFIVNLAVADLLLTSTVLP-FSAIFEILGYWA-FGRVFCNIWAAVDVLCCTASIm 89
                         90       100
                 ....*....|....*....|....
gi 268607585 120 -LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15325   90 sLCIISIDRYIGVSYPLRYPSIMT 113
7TM_GPCR_Srsx pfam10320
Serpentine type 7TM GPCR chemoreceptor Srsx; Chemoreception is mediated in Caenorhabditis ...
41-169 5.22e-05

Serpentine type 7TM GPCR chemoreceptor Srsx; Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type. Srsx is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf'.


Pssm-ID: 255903 [Multi-domain]  Cd Length: 257  Bit Score: 44.12  E-value: 5.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585   41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:pfam10320   2 VIGLFGNVLMIHLTFRKKKLRSKCSILICVQCIAHLICLCGEIV--FVVLLFTGTQLTRNECFWMISFYIFGQTAQGPLM 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 268607585  121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIaavtrsFFICFPLIFLVY 169
Cdd:pfam10320  80 LMIGIDRLIAVKFPIFYRLLSSSKYLFIQLI------FPVIYSSFITVY 122
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
31-152 5.71e-05

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 44.05  E-value: 5.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFqDRSISFASCVSQMF-FL 109
Cdd:cd15306    2 WAALLILMVIIPTIGGNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTILF-EAMWPLPLVLCPIWlFL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 268607585 110 HFIFVTESGI-LLSMAFDRYVAICYPL-------RYTTILTPSVI--IKMGIA 152
Cdd:cd15306   81 DVLFSTASIMhLCAISLDRYIAIKKPIqasqynsRATAFIKITVVwlISIGIA 133
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
39-163 5.92e-05

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 43.76  E-value: 5.92e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI----FWFqdrsisFASCVSQMFF-LHFIF 113
Cdd:cd15321   16 LILFTIFGNVLVIIAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANelmgYWY------FRKTWCEIYLaLDVLF 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 268607585 114 VTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFP 163
Cdd:cd15321   90 CTSSIVhLCAISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLP 140
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
39-165 8.85e-05

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 43.29  E-value: 8.85e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLH-EPMYFFLTMLALADiFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTES 117
Cdd:cd15341   10 CGLLCILENVAVLYLILSSPKLRrKPSYLFIGSLALAD-FLASVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMSFTASL 88
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 268607585 118 GILLSMAFDRYVAICYPLRYTTILT-PSVIIKMGIAAVTRSFFICFPLI 165
Cdd:cd15341   89 GSLLLMAFDRYVCIYYPSEYKALVTrKRALVALAVMWVLTALIAYLPLM 137
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
41-303 9.00e-05

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 43.25  E-value: 9.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI- 119
Cdd:cd15063   12 VLVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLP--FSAVNEVLDVWIFGHTWCQIWLAVDVWMCTASIl 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 -LLSMAFDRYVAICYPLRYTTILTpSVIIKMGIAAV-TRSFFICFPLIFlvyrltycGKSIIRHSYCEHMGIARLACDSI 197
Cdd:cd15063   90 nLCAISLDRYLAITRPIRYPSLMS-TKRAKCLIAGVwVLSFVICFPPLV--------GWNDGKDGIMDYSGSSSLPCTCE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KVNIY-YGLIVALFSIFLDVVLIIVSYARIlcavYRIPSQDTrlKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIPL 276
Cdd:cd15063  161 LTNGRgYVIYSALGSFYIPMLVMLFFYFRI----YRAARMET--KAAKTVAIIVGCFIFCWLPFFTVYLVRAFCEDCIPP 234
                        250       260
                 ....*....|....*....|....*..
gi 268607585 277 HVHILLANLYvVLPPSLNPIIYGVKTK 303
Cdd:cd15063  235 LLFSVFFWLG-YCNSALNPCIYALFSR 260
7tmA_MC3R cd15352
melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G ...
37-142 1.03e-04

melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320474 [Multi-domain]  Cd Length: 272  Bit Score: 43.34  E-value: 1.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  37 FSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFascvSQMFFLHFIFVTE 116
Cdd:cd15352    8 LTLGIVSLLENILVILAVVKNKNLHSPMYFFLCSLAVADMLVSVSNSLETIMIAVLNSGYLVI----SDQFIQHMDNVFD 83
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 268607585 117 SGI----------LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15352   84 SMIcislvasicnLLAIAVDRYVTIFYALRYHSIMT 119
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
41-142 1.54e-04

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 42.59  E-value: 1.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIfwfqdRSISFASCVSQMFFLHFIFVTESGI- 119
Cdd:cd15353   12 IVSLLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETVVI-----TLLNGNDTDAQSFTVNIDNVIDSVIc 86
                         90       100       110
                 ....*....|....*....|....*....|..
gi 268607585 120 ---------LLSMAFDRYVAICYPLRYTTILT 142
Cdd:cd15353   87 ssllasicsLLSIAVDRYFTIFYALQYHNIMT 118
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
42-168 1.55e-04

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 43.01  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  42 VAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLA-IFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd15217   13 VSLAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVsIRNGSAWTYSVLSCKIVAFMAVLFCFHAAFML 92
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 268607585 121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLV 168
Cdd:cd15217   93 FCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTLSVAMAFPPVFDV 140
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
39-298 1.76e-04

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 42.59  E-value: 1.76e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCvSQMFFLHFIFVTES- 117
Cdd:cd15959   10 AILVIVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVC-ELWTSVDVLCVTASi 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 118 GILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICF-PLIFLVYRLTYCGKSIIRHSycehmgiaRLACDS 196
Cdd:cd15959   89 ETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISFlPIMNQWWRDGADEEAQRCYD--------NPRCCD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 197 IKVNIYYGLIVALFSIFLDVVLIIVSYARILC----------------------------AVYRIPSQDTRLK---ALST 245
Cdd:cd15959  161 FVTNMPYAIVSSTVSFYVPLLVMIFVYVRVFVvatrqvrlirkdkvrfppeesppaesrpACGRRPSRLLAIKehkALKT 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 268607585 246 CGSHVCVILLFYMPVFFSSLGHRFGGDSIPLHVHILLaNLYVVLPPSLNPIIY 298
Cdd:cd15959  241 LGIIMGTFTLCWLPFFVANIIKVFCRSLVPDPAFLFL-NWLGYANSAFNPIIY 292
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
31-164 1.93e-04

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 42.20  E-value: 1.93e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-KVLAIFWFQDRSISFASCvSQMFFL 109
Cdd:cd15305    2 WPALLILIIIILTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPvSLIAILYDYAWPLPRYLC-PIWISL 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 268607585 110 HFIFVTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIkMGIAAV-TRSFFICFPL 164
Cdd:cd15305   81 DVLFSTASIMhLCAISLDRYVAIRNPIEHSRFNSRTKAM-MKIAAVwTISIGISMPI 136
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
31-232 1.95e-04

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 42.49  E-value: 1.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFS-MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15979    1 TVRILLYSvIFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVFCMPFTLIPNLMGTFIFGEVICKAVAYLM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCehmgi 189
Cdd:cd15979   81 GVSVSVSTFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPVPVGDRPRGHQC----- 155
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 268607585 190 aRLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYR 232
Cdd:cd15979  156 -RHAWPSAQVRQAWYVLLLLILFFIPGVVMIVAYGLISRELYR 197
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
38-142 2.15e-04

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 42.09  E-value: 2.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  38 SMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTES 117
Cdd:cd15351    9 FLGLVSLVENILVVVAIAKNRNLHSPMYYFICCLAVSDMLVSVSNLIETLFMLLLEHGVLVCRAPMLQHMDNVIDTMICS 88
                         90       100       110
                 ....*....|....*....|....*....|.
gi 268607585 118 GILLSMAF------DRYVAICYPLRYTTILT 142
Cdd:cd15351   89 SVVSSLSFlgaiavDRYITIFYALRYHSIMT 119
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
32-298 2.57e-04

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 42.03  E-value: 2.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQmFFLHF 111
Cdd:cd15050    3 LGIALSTISLITVILNLLVLYAVRTERKLHTVGNLYIVSLSVADLIVGAVVMP--LNIVYLLESKWILGRPVCL-FWLSM 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGILLS---MAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPlIFLVYRLTYCGKSIIRHSYCEhmg 188
Cdd:cd15050   80 DYVASTASIFSlfiLCIDRYRSVQQPLKYLKYRTKTRASLMISGAWLLSFLWVIP-ILGWHHFARGGERVVLEDKCE--- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 189 iarlacDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRipsqdtRLKALSTCGSHVCVILLFYMPVFFSSLGHR 268
Cdd:cd15050  156 ------TDFHDVTWFKVLTAILNFYIPSLLMLWFYAKIFKAVNR------ERKAAKQLGFIMAAFILCWIPYFILFMVIA 223
                        250       260       270
                 ....*....|....*....|....*....|
gi 268607585 269 FGGDSIPLHVHILLANLYvVLPPSLNPIIY 298
Cdd:cd15050  224 FCKNCCNENLHMFTIWLG-YINSTLNPFIY 252
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
71-307 2.63e-04

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 42.01  E-value: 2.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  71 LALADIFLSTVTIPkvlaifwFQDRSISFAS-------CVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTILTP 143
Cdd:cd15002   43 LSAADLLLLLFSVP-------FRAAAYSKGSwplgwfvCKTADWFGHACMAAKSFTIAVLAKACYMYVVNPTKQVTIKQR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 144 SViikMGIAAVTRSFFICFPLIFLVYRLtycgksiIRHSYCEHMGIARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSY 223
Cdd:cd15002  116 RI---TAVVASIWVPACLLPLPQWLFRT-------VKQSEGVYLCILCIPPLAHEFMSAFVKLYPLFVFCLPLTFALFYF 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 224 ARILCAVYR--IPSQDTRLKALSTCGSHVCVIL-----LFYMP--VFFSSLGHRFGGDSIPLHVHILLANLYVVLPPSLN 294
Cdd:cd15002  186 WRAYGQCQRrgTKTQNLRNQIRSRKLTHMLLSVvlaftILWLPewVAWLWLIHIKSSGSSPPQLFNVLAQLLAFSISSVN 265
                        250
                 ....*....|...
gi 268607585 295 PIIYGVKTKQIQE 307
Cdd:cd15002  266 PIIFLLMSEEFRE 278
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
32-232 3.24e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 41.91  E-value: 3.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFS-MYIVAVIGN-TFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLA----IFWFQdrsiSFASCVSQ 105
Cdd:cd15382    2 VSIIVYSvLFLIAAVGNlTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIGwaatVAWLA----GDFLCRLM 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 106 MFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTilTPSVIIKMGIAAVTRSFFICFPLIFLvyrltYCGKS---IIRHS 182
Cdd:cd15382   78 LFFRAFGLYLSSFVLVCISLDRYFAILKPLRLSD--ARRRGRIMLAVAWVISFLCSIPQSFI-----FHVEShpcVTWFS 150
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 268607585 183 YCEHMGIARlacdSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYR 232
Cdd:cd15382  151 QCVTFNFFP----SHDHELAYNIFNMITMYALPLIIIVFCYSLILCEISR 196
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
31-164 3.33e-04

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 41.46  E-value: 3.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLH 110
Cdd:cd15304    2 WPALLTVIVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLD 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 268607585 111 FIFVTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPL 164
Cdd:cd15304   82 VLFSTASIMhLCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISMPI 136
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
41-251 3.89e-04

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 41.65  E-value: 3.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMY-FFLTMLALADIFLSTVTIP----KVLAIFW----FQDRSISFASCVSQMFFLHf 111
Cdd:cd15057   12 LLTLLGNALVIAAVLRFRHLRSKVTnYFIVSLAVSDLLVAILVMPwaavNEVAGYWpfgsFCDVWVSFDIMCSTASILN- 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 ifvtesgiLLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTY--CGKSIIRHSYCEhmgi 189
Cdd:cd15057   91 --------LCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPVQLGWHRADdtSEALALYADPCQ---- 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 268607585 190 arlaCDSiKVNIYYGLIVALFSIFLDVVLIIVSYARIlcavYRIP-SQDTRLKALSTCGSHVC 251
Cdd:cd15057  159 ----CDS-SLNRTYAISSSLISFYIPVAIMIVTYTRI----YRIArRQIRRIAALERAAQEST 212
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
39-300 4.10e-04

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 41.59  E-value: 4.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTI-PKVLAIFWFQDRSISFAsCVSQMFFLHFIFVTES 117
Cdd:cd14986   10 LFVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADLVVAFFTVlTQIIWEATGEWVAGDVL-CRIVKYLQVVGLFAST 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 118 GILLSMAFDRYVAICYPLRytTILTPSVIIKMGIAAVTRSFFICFPLIFlVYRLTYCGKSIIRhsyCEHMGIARLacdSI 197
Cdd:cd14986   89 YILVSMSLDRYQAIVKPMS--SLKPRKRARLMIVVAWVLSFLFSIPQLV-IFVERELGDGVHQ---CWSSFYTPW---QR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KVNIYYGLIVALfsiFLDVVLIIVSYARILCAVY--------RIPSQDTRLKALSTCGSH----------------VCVI 253
Cdd:cd14986  160 KVYITWLATYVF---VIPLIILSYCYGRILRTIWirsrqktdRPIAPTAMSCRSVSCVSSrvslisrakiktikmtLVII 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 268607585 254 LLF---YMPVFFSSLGHRFGGDSIPLHVHILLANLYVVLPPSLNPIIYGV 300
Cdd:cd14986  237 LAFilcWTPYFIVQLLDVYAGMQQLENDAYVVSETLASLNSALNPLIYGF 286
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
36-226 4.75e-04

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 41.19  E-value: 4.75e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSMY----IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-KVLAIFWFQDRSISFASCVSQMFFLH 110
Cdd:cd15392    3 IILMYstifVLAVGGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPfSFIALLILQYWPFGEFMCPVVNYLQA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 111 FIFVTESGILLSMAFDRYVAICYPL--RYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYcehmg 188
Cdd:cd15392   83 VSVFVSAFTLVAISIDRYVAIMWPLrpRMTKRQALLLIAVIWIFALATALPIAITSRLFEDSNASCGQYICTESW----- 157
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 268607585 189 iarlacDSIKVNIYYGLIVALFSIFLDVVLIIVSYARI 226
Cdd:cd15392  158 ------PSDTNRYIYSLVLMILQYFVPLAVLVFTYTRI 189
7tmA_D1B_dopamine_R cd15319
D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
67-249 5.99e-04

D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320442 [Multi-domain]  Cd Length: 317  Bit Score: 41.10  E-value: 5.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  67 FLTMLALADIFLSTVTIP----KVLAIFW----FQDRSISFASCVSQMFFLHfifvtesgiLLSMAFDRYVAICYPLRYT 138
Cdd:cd15319   39 FIVSLAVSDLFVALLVMPwkavAEVAGYWpfgaFCDVWVAFDIMCSTASILN---------LCVISVDRYWAISSPFRYE 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 139 TILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARlACDSiKVNIYYGLIVALFSIFLDVVL 218
Cdd:cd15319  110 RKMTQRVALVMISVAWTLSVLISFIPVQLNWHKDSGDDWVGLHNSSISRQVEE-NCDS-SLNRTYAISSSLISFYIPVAI 187
                        170       180       190
                 ....*....|....*....|....*....|..
gi 268607585 219 IIVSYARIlcavYRIPS-QDTRLKALSTCGSH 249
Cdd:cd15319  188 MIVTYTRI----YRIAQiQIRRISSLERAAEH 215
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
40-298 6.38e-04

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 40.74  E-value: 6.38e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSI-SFASCVSQMFFLHFIFVTESG 118
Cdd:cd14997   11 FVVGVLGNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVETWAREPWLlGEFMCKLVPFVELTVAHASVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLV-YRLTYcgksiirHSYCEHMGIARLACDSI 197
Cdd:cd14997   91 TILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFITeFKEED-------FNDGTPVAVCRTPADTF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KVNIYYGLIVALFsIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSH----------VCVILLFympvFFSSLGH 267
Cdd:cd14997  164 WKVAYILSTIVVF-FVVPLAILSGLYSVICRRLVGHPALESRRADAANRHTLrsrrqvvymlITVVVLF----FVCLLPF 238
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 268607585 268 RFGGDSIPLHVHILLANL--------------YVVLPPSLNPIIY 298
Cdd:cd14997  239 RVVTLWIIFAPDEDLQALglegylnllvfcrvMVYLNSALNPILY 283
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
41-262 6.39e-04

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 40.67  E-value: 6.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP-----KVLAIFWFQDRSISFASCVSQMFFLHFIFVt 115
Cdd:cd15327   12 LMAIVGNILVILSVACNRHLQTVTNYFIVNLAIADLLLSTTVLPfsatlEVLGFWAFGRVFCDIWAAVDVLCCTASILS- 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 116 esgiLLSMAFDRYVAICYPLRYTTILTpsviikmgiaavTRSFFICFPLIFLVYRLTYCGKSIirhSYCEHMGIARLACd 195
Cdd:cd15327   91 ----LCVISVDRYVGVKHSLKYPTIMT------------ERKAGVILVLLWVSSMVISIGPLL---GWKEPPPPDESIC- 150
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 268607585 196 SIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRIPSQDtrlKALSTCGSHVCVILLFYMPVFF 262
Cdd:cd15327  151 SITEEPGYALFSSLFSFYLPLMVILVMYFRVYVVALKFSREK---KAAKTLAIVVGVFILCWFPFFF 214
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
41-232 1.13e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 40.00  E-value: 1.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSIsFASCVSQMF-FLHFIF-VTESG 118
Cdd:cd15337   12 ILGVIGNLLVIYLFSKTKSLRTPSNMFIINLAISDFGFSAVNGFPLKTISSFNKKWI-WGKVACELYgFAGGIFgFMSIT 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGksiiRHSYCEHMGIARLAcdsik 198
Cdd:cd15337   91 TLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGWGRYVPEG----FQTSCTFDYLSRDL----- 161
                        170       180       190
                 ....*....|....*....|....*....|....
gi 268607585 199 VNIYYGLIVALFSIFLDVVLIIVSYARILCAVYR 232
Cdd:cd15337  162 NNRLFILGLFIFGFLCPLLIIIFCYVNIIRAVRN 195
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
39-165 1.34e-03

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 39.92  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHE--PMYFFLTMLALADIFLSTVTIPKVLAI----FWFQDrsiSFASCVSQMFFLHFI 112
Cdd:cd14981   10 MFVFGVLGNLLALIVLARSSKSHKwsVFYRLVAGLAITDLLGILLTSPVVLAVyasnFEWDG---GQPLCDYFGFMMSFF 86
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 268607585 113 FVTESGILLSMAFDRYVAICYPLRYTTILTPS-VIIKMGIAAVTRSFFICFPLI 165
Cdd:cd14981   87 GLSSLLIVCAMAVERFLAITHPFFYNSHVKKRrARLMLGAVWAFALLIASLPLL 140
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
39-168 1.40e-03

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 39.87  E-value: 1.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIfLSTVTIPKVLAIFWfQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15131   10 LFVVGVTGNLMTMLVVSKYRDMRTTTNLYLSSMAFSDL-LIFLCMPLDLYRLW-QYRPWNFGDLLCKLFQFVSESCTYST 87
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268607585 119 IL--LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLV 168
Cdd:cd15131   88 ILniTALSVERYFAICFPLRAKVVVTKRRVKLVILVLWAVSFLSAGPIFVLV 139
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
42-298 1.44e-03

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 39.68  E-value: 1.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  42 VAVIGNTFLILLISIEHSLHEPMYFFLTMLALAD-IFLSTVTIPKVLAIFWFQDRSI-SFASCVSQMFFLHFIFVTESGI 119
Cdd:cd14995   13 VGIVGNIMVVLVVLRTRHMRTPTNCYLVSLAVADlMVLVAAGLPNEIESLLGPDSWIyGYAGCLLITYLQYLGINASSLS 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 120 LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLV--YRLTYCGKSIIRHSYcehmgiaRLACDSI 197
Cdd:cd14995   93 ITAFTIERYIAICHPMKAQFICTVSRAKKIICFVWIFTSLYCSPWLFLLdlSIKHYGDDIVVRCGY-------KVSRHYY 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 198 KvnIYYGLIVALFSIfLDVVLIIVSYARILCAVYRIPSQDTRLKALStcgshVCVILLFYMPVFFSSLGHRFGGDSIPLH 277
Cdd:cd14995  166 L--PIYLADFVLFYV-IPLLLAIVLYGLIGRILFSSRKQVTKMLAVV-----VVLFALLWMPYRTLVVYNSFASPPYLDL 237
                        250       260
                 ....*....|....*....|.
gi 268607585 278 VHILLANLYVVLPPSLNPIIY 298
Cdd:cd14995  238 WFLLFCRTCIYLNSAINPILY 258
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
30-166 1.62e-03

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 39.27  E-value: 1.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRsiSFASCVSQMF-F 108
Cdd:cd15213    1 ITLAILMILMIFVGFLGNSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSLVCMPFAAVTIITGRW--IFGDIFCRISaM 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 268607585 109 LHFIFVTES-GILLSMAFDRYVAIcypLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF 166
Cdd:cd15213   79 LYWFFVLEGvAILLIISVDRYLII---VQRQDKLNPHRAKILIAVSWVLSFCVSFPPLV 134
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
39-163 2.06e-03

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 39.08  E-value: 2.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15978   10 IFLLSVLGNSLIIAVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFTLIPNLLKDFIFGSAVCKTATYFMGISVSVSTF 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFP 163
Cdd:cd15978   90 NLVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSFTIMLP 134
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
32-300 2.18e-03

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 38.87  E-value: 2.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  32 LSIPIFSmyIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWfQDRSISFASCVSQMFFLHF 111
Cdd:cd15053    5 LFLLLLP--LLTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVYVEV-NGGKWYLGPILCDIYIAMD 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 IFVTESGI--LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYcgksiirhsycehmgi 189
Cdd:cd15053   82 VMCSTASIfnLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGLNNVPY---------------- 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 aRLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRipsqdtRLKALSTCGSHVCVILLFYMPVFFSSL--GH 267
Cdd:cd15053  146 -RDPEECRFYNPDFIIYSSISSFYIPCIVMLLLYYRIFRALRR------EKKATKTLAIVLGVFLFCWLPFFTLNIlnAI 218
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 268607585 268 RFGGDSIPLHVHILLANLYVVL---PPSLNPIIYGV 300
Cdd:cd15053  219 CPKLQNQSCHVGPALFSLTTWLgyvNSFLNPIIYTI 254
7tmA_GPR19 cd15008
G protein-coupled receptor 19, member of the class A family of seven-transmembrane G ...
36-137 2.49e-03

G protein-coupled receptor 19, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 19 is an orphan receptor that is expressed predominantly in neuronal cells during mouse embryogenesis. Its mRNA is found frequently over-expressed in patients with small cell lung cancer. GPR19 shares a significant amino acid sequence identity with the D2 dopamine and neuropeptide Y families of receptors. Human GPR19 gene, intronless in the coding region, also has a distribution in brain overlapping that of the D2 dopamine receptor gene, and is located on chromosome 12. GPR19 is a member of the class A family of GPCRs, which represents a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320137 [Multi-domain]  Cd Length: 275  Bit Score: 39.05  E-value: 2.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSM-YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFV 114
Cdd:cd15008    5 VFGVlWLVSVFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLLSVASAPFVLLQFTSGRWTLGSAMCKLVRYFQYLTPG 84
                         90       100
                 ....*....|....*....|...
gi 268607585 115 TESGILLSMAFDRYVAICYPLRY 137
Cdd:cd15008   85 VQIYVLLSICVDRFYTIVYPLSF 107
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
41-298 2.67e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 38.90  E-value: 2.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIP---------KVLAIFWFQDRSISFASCVSQMFFLHf 111
Cdd:cd15066   11 LAAIFGNLLVIISVMRHRKLRVITNYFVVSLAMADMLVALCAMTfnasveitgRWMFGYFMCDVWNSLDVYFSTASILH- 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 112 ifvtesgiLLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFL-VYRLTYCGKSIIRHSY-CEhmgi 189
Cdd:cd15066   90 --------LCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPIFLgWYTTEEHLQYRKTHPDqCE---- 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 190 arlacdsIKVNIYYGLIVALFSIFLDVVLIIVSYARILCAVYRipsqdtRLKALSTCGSHVCVILLFYMPVFFSSLGHRF 269
Cdd:cd15066  158 -------FVVNKIYALISSSVSFWIPCIVMIFTYYRIYLEAKR------EHKAAKTLGIIMGAFILCWLPFFLWYVTTTL 224
                        250       260       270
                 ....*....|....*....|....*....|..
gi 268607585 270 GGDSIP---LHVHILLANLYvvLPPSLNPIIY 298
Cdd:cd15066  225 CGDACPyppILVSILFWIGY--FNSTLNPLIY 254
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
34-167 3.14e-03

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 38.70  E-value: 3.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAI----FWFqdrsisFASCVSQMFF- 108
Cdd:cd15324    5 LVVVVIILVTIVGNVLVVVAVFTSRALRAPQNLFLVSLASADILVATLVIPFSLANevmgYWY------FGSTWCAFYLa 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 109 LHFIFVTESGI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFL 167
Cdd:cd15324   79 LDVLFCTSSIVhLCAISLDRYWSVTKAVSYNLKRTPKRIKRMIAVVWVISAVISFPPLLM 138
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
39-139 3.34e-03

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 38.56  E-value: 3.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  39 MYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTI-PKVLAIFWFQDRSISFAsCVSQMFFLHFIFVTES 117
Cdd:cd15197   10 LFVFIVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVGLINVlTDIIWRITVEWRAGDFA-CKVIRYLQVVVTYAST 88
                         90       100
                 ....*....|....*....|..
gi 268607585 118 GILLSMAFDRYVAICYPLRYTT 139
Cdd:cd15197   89 YVLVALSIDRYDAICHPMNFSQ 110
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
36-143 3.66e-03

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 38.27  E-value: 3.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  36 IFSM-YIVAVIGNTF-LILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIF 113
Cdd:cd15097    6 VFSLiFLLGTVGNSLvLAVLLRSGQSGHNTTNLFILNLSVADLCFILFCVPFQATIYSLEGWVFGSFLCKAVHFFIYLTM 85
                         90       100       110
                 ....*....|....*....|....*....|
gi 268607585 114 VTESGILLSMAFDRYVAICYPLRYTTILTP 143
Cdd:cd15097   86 YASSFTLAAVSVDRYLAIRYPLRSRELRTP 115
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
41-166 4.50e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 38.18  E-value: 4.50e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFFLHFIFVTESGI- 119
Cdd:cd15060   12 AFTIVGNILVILSVFTYRPLRIVQNFFIVSLAVADLAVAIFVLP--LNVAYFLLGKWLFGIHLCQMWLTCDILCCTASIl 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 268607585 120 -LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF 166
Cdd:cd15060   90 nLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLI 137
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
42-168 6.04e-03

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 37.92  E-value: 6.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  42 VAVIGNTFLILLISIEHSLHEP---MYFFLTMLALADIFLSTVTIPKVLAIF-WFQDRSISFASCVSQMFFLHFIFVTES 117
Cdd:cd15356   13 LGAAGNALTIHLVLKKRSLRGLqgtVHYHLVSLALSDLLILLISVPIELYNFvWFHYPWVFGDLVCRGYYFVRDICSYAT 92
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268607585 118 GI-LLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLV 168
Cdd:cd15356   93 VLnIASLSAERYLAICQPLRAKRLLSKRRTKWLLALIWASSLGFALPMAFIM 144
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
41-304 6.41e-03

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 37.63  E-value: 6.41e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd15210   12 VVGVPGNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLVAVSLLTL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIirhsycehmgiarLACdSIKVN 200
Cdd:cd15210   92 VLITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFGSFLPLWLGIWGRFGLDPKV-------------CSC-SILRD 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 201 IY---YGLIVALFSIFLDVVLIIVSYARilcavyripSQDTRLkaLSTCGSHVCVILLFYMPVFFSSLGHRfggDSIPLH 277
Cdd:cd15210  158 KKgrsPKTFLFVFGFVLPCLVIIICYAR---------REDRRL--TRMMLVIFLCFLVCYLPITLVNVFDD---EVAPPV 223
                        250       260
                 ....*....|....*....|....*..
gi 268607585 278 VHILLANLyVVLPPSLNPIIYGVKTKQ 304
Cdd:cd15210  224 LHIIAYVL-IWLSSCINPIIYVAMNRQ 249
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
40-232 6.45e-03

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 37.70  E-value: 6.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  40 YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDR-SISFASCVSQMFFLHFIFVTESG 118
Cdd:cd15134   11 FVTGVVGNLCTCIVIARNRSMHTATNYYLFSLAVSDLLLLILGLPFELYTIWQQYPwVFGEVFCKLRAFLSEMSSYASVL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 119 ILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFF--ICFPLIFLVYRLTY--CGKSIIRHSYcehmgiarlAC 194
Cdd:cd15134   91 TITAFSVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVcaLPFAIQTRIVYLEYppTSGEALEESA---------FC 161
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 268607585 195 dSIKVNIYYGLIVALFSIFL----DVVLIIVSYARILCAVYR 232
Cdd:cd15134  162 -AMLNEIPPITPVFQLSTFLffiiPMIAIIVLYVLIGLQLRR 202
7tmA_TAAR6_8_9 cd15316
trace amine-associated receptors 6, 8, and 9, member of the class A family of ...
41-145 7.09e-03

trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320439 [Multi-domain]  Cd Length: 290  Bit Score: 37.53  E-value: 7.09e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNtfLILLISIEH--SLHEPMYFFLTMLALADIFLSTVTIP-----KVLAIFWFQDRSISFASCVSQMFFLHFIF 113
Cdd:cd15316   12 VLAVFGN--LLVMISILHfkQLHSPTNFLIASLACADFLVGVTVMPfstvrSVESCWYFGESFCTFHTCCDVSFCYASLF 89
                         90       100       110
                 ....*....|....*....|....*....|..
gi 268607585 114 VtesgiLLSMAFDRYVAICYPLRYTTILTPSV 145
Cdd:cd15316   90 H-----LCFISVDRYIAVTDPLVYPTKFTVSV 116
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
30-298 7.75e-03

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 37.25  E-value: 7.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  30 IWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPkvLAIFWFQDRSISFASCVSQMFF- 108
Cdd:cd15329    1 VLIGIVLLIIILGTVVGNALVIIAVCLVKKLRTPSNYLIVSLAVSDLLVALLVMP--LAIIYELSGYWPFGEILCDVWIs 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 109 LHFIFVTESGILLSM-AFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF----LVYRLTYCGksiirhsY 183
Cdd:cd15329   79 FDVLLCTASILNLCAiSVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISIPPLFgwknKVNDPGVCQ-------V 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 184 CEHMGiarlacdsikvniyYGLIVALFSIFLDVVLIIVSYARIlcavYRIPSQDTrlKALSTCGSHVCVILLFYMPVFFS 263
Cdd:cd15329  152 SQDFG--------------YQIYATFGAFYIPLIVMLVLYYKI----YRAAKSER--KAIKTLGIIMGAFTLCWLPFFIL 211
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 268607585 264 SLGHRFGGDSIPLHVHILLANLYVVLPPS---LNPIIY 298
Cdd:cd15329  212 ALLRPFLKPIKCSCIPLWLSRLFLWLGYAnsfLNPIIY 249
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
34-166 8.01e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 37.27  E-value: 8.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  34 IPIFSMYIVAV--IGNTFLILLISIEHSLHEPMYFFLTMLALADIfLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHF 111
Cdd:cd14970    3 IPAVYSVVCVVglTGNSLVIYVILRYSKMKTVTNIYILNLAVADE-LFLLGLPFLATSYLLGYWPFGEVMCKIVLSVDAY 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 268607585 112 IFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLIF 166
Cdd:cd14970   82 NMFTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVII 136
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
31-226 8.95e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 37.37  E-value: 8.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  31 WLSIPIFSM-YIVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFL 109
Cdd:cd15206    1 ELIIPLYSViFLLAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDLLLAVFCMPFTLVGQLLRNFIFGEVMCKLIPYFQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585 110 HFIFVTESGILLSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPliFLVYRLTycgKSIIRHSYCEhmgi 189
Cdd:cd15206   81 AVSVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSP--ILVFSNL---IPMSRPGGHK---- 151
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 268607585 190 ARLACDSIKVNIYYGLIVALFSIFLDVVLIIVSYARI 226
Cdd:cd15206  152 CREVWPNEIAEQAWYVFLDLMLLVIPGLVMSVAYGLI 188
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
41-165 9.08e-03

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 37.07  E-value: 9.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268607585  41 IVAVIGNTFLILLISIEHSLHEPMYFFLTMLALADIfLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGIL 120
Cdd:cd15094   12 IVGLVGNGLVIYVVLRYAKMKTVTNLYILNLAVADE-CFLIGLPFLIVTMILKYWPFGAAMCKIYMVLTSINQFTSSFTL 90
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 268607585 121 LSMAFDRYVAICYPLRYTTILTPSVIIKMGIAAVTRSFFICFPLI 165
Cdd:cd15094   91 TVMSADRYLAVCHPIRSMRYRTPFIAKVVCATTWSISFLVMLPII 135
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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