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Conserved domains on  [gi|239735596|ref|NP_775761|]
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transmembrane protein 171 isoform 1 [Homo sapiens]

Protein Classification

TMEM171 domain-containing protein( domain architecture ID 10634569)

TMEM171 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TMEM171 pfam15471
Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is ...
2-319 0e+00

Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is also known as parturition-related protein 2. Proteins in this family are typically between 242 and 326 amino acids in length.


:

Pssm-ID: 464734  Cd Length: 319  Bit Score: 593.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596    2 SPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLKVAGPACAVVGLGAVILARSRA 81
Cdd:pfam15471   1 SPVAAAEPDGEQSDRHVSKLIFFLFVFGAVLLCVGVLLSIFGFQACQYETLPDCSMVLKIAGPSCAVVGLGAVILARSRA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596   82 QLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFL 161
Cdd:pfam15471  81 RLQLRERQLQGEQVDPDQAFFCGESRQFAQCLIFGFLFLTSGMLISILGIWVPGCGSGWAQEPLNETDSSDVEPQICGFL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596  162 SLQIMGPLIVLVGLCFFVVAHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPG 241
Cdd:pfam15471 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNLNVSQDASESEEGQTQSTEPVQVTVGDAVIIFPPPPPPYFPESSASAVTPSPG 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 239735596  242 TNSLLPNENPPSYYSIFNYG-RTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSS 319
Cdd:pfam15471 241 ANGLLPSENPPSYYSIFNDGtPTPEDQGTASERDRESIYTISGTSSSSEISHTPHLSSELPPRYEEKETAAATSLSPSS 319
 
Name Accession Description Interval E-value
TMEM171 pfam15471
Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is ...
2-319 0e+00

Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is also known as parturition-related protein 2. Proteins in this family are typically between 242 and 326 amino acids in length.


Pssm-ID: 464734  Cd Length: 319  Bit Score: 593.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596    2 SPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLKVAGPACAVVGLGAVILARSRA 81
Cdd:pfam15471   1 SPVAAAEPDGEQSDRHVSKLIFFLFVFGAVLLCVGVLLSIFGFQACQYETLPDCSMVLKIAGPSCAVVGLGAVILARSRA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596   82 QLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFL 161
Cdd:pfam15471  81 RLQLRERQLQGEQVDPDQAFFCGESRQFAQCLIFGFLFLTSGMLISILGIWVPGCGSGWAQEPLNETDSSDVEPQICGFL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596  162 SLQIMGPLIVLVGLCFFVVAHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPG 241
Cdd:pfam15471 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNLNVSQDASESEEGQTQSTEPVQVTVGDAVIIFPPPPPPYFPESSASAVTPSPG 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 239735596  242 TNSLLPNENPPSYYSIFNYG-RTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSS 319
Cdd:pfam15471 241 ANGLLPSENPPSYYSIFNDGtPTPEDQGTASERDRESIYTISGTSSSSEISHTPHLSSELPPRYEEKETAAATSLSPSS 319
 
Name Accession Description Interval E-value
TMEM171 pfam15471
Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is ...
2-319 0e+00

Transmembrane protein family 171; This family of proteins is found in eukaryotes. TMEM171 is also known as parturition-related protein 2. Proteins in this family are typically between 242 and 326 amino acids in length.


Pssm-ID: 464734  Cd Length: 319  Bit Score: 593.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596    2 SPAAAAEPDGDQQDRHVSKLIFCFFVFGAVLLCVGVLLSIFGFQACQYKPLPDCPMVLKVAGPACAVVGLGAVILARSRA 81
Cdd:pfam15471   1 SPVAAAEPDGEQSDRHVSKLIFFLFVFGAVLLCVGVLLSIFGFQACQYETLPDCSMVLKIAGPSCAVVGLGAVILARSRA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596   82 QLQLRAGLQRGQQMDPDRAFICGESRQFAQCLIFGFLFLTSGMLISVLGIWVPGCGSNWAQEPLNETDTGDSEPRMCGFL 161
Cdd:pfam15471  81 RLQLRERQLQGEQVDPDQAFFCGESRQFAQCLIFGFLFLTSGMLISILGIWVPGCGSGWAQEPLNETDSSDVEPQICGFL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 239735596  162 SLQIMGPLIVLVGLCFFVVAHVKKRNTLNAGQDASEREEGQIQIMEPVQVTVGDSVIIFPPPPPPYFPESSASAVAESPG 241
Cdd:pfam15471 161 SLQIMGPLIVLVGLCFFVVAHVKKRNNLNVSQDASESEEGQTQSTEPVQVTVGDAVIIFPPPPPPYFPESSASAVTPSPG 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 239735596  242 TNSLLPNENPPSYYSIFNYG-RTPTSEGAASERDCESIYTISGTNSSSEASHTPHLPSELPPRYEEKENAAATFLPLSS 319
Cdd:pfam15471 241 ANGLLPSENPPSYYSIFNDGtPTPEDQGTASERDRESIYTISGTSSSSEISHTPHLSSELPPRYEEKETAAATSLSPSS 319
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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