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Conserved domains on  [gi|148536851|ref|NP_997151|]
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coiled-coil domain-containing protein 87 [Mus musculus]

Protein Classification

coiled-coil domain-containing protein( domain architecture ID 706733)

coiled-coil domain-containing protein contains a region with alpha-helical coiled-coil sequence signatures that is being annotated by a variety of protein family models, not necessarily indicating family membership

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MAP65_ASE1 super family cl27203
Microtubule associated protein (MAP65/ASE1 family);
672-855 8.65e-11

Microtubule associated protein (MAP65/ASE1 family);


The actual alignment was detected with superfamily member pfam03999:

Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 65.02  E-value: 8.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  672 IHNLQQRLKRLWVMLEVPEQNRLDMVIKYS----------SNARLQQLPALIKAWEQVLKPIQKRESLLGRLEWFEQQAS 741
Cdd:pfam03999 286 IEDLRVEIEELWDKLFYSTEQRKRFIPFFEelytedllelHELELKRLKEEYESNKEILELVEKWEELWEDMEELEAKAN 365

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  742 DPNRFfqkpdllMNR----LLEENRFRSYLQRKLNRMESNLVSLLERIESVFGEPVTFKGRSYLKKMKQDKVE-MLYWLQ 816
Cdd:pfam03999 366 DPSRF-------NNRggklLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEIIAEQWEElRQEKER 438

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 148536851  817 QQRRIRNLTQAQKTFRQSCTFtgsSSQALVAPGNTPTTH 855
Cdd:pfam03999 439 ERLSQRKKLKGSKQTEREMLY---GSAPNSTLHRTPSKL 474
 
Name Accession Description Interval E-value
MAP65_ASE1 pfam03999
Microtubule associated protein (MAP65/ASE1 family);
672-855 8.65e-11

Microtubule associated protein (MAP65/ASE1 family);


Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 65.02  E-value: 8.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  672 IHNLQQRLKRLWVMLEVPEQNRLDMVIKYS----------SNARLQQLPALIKAWEQVLKPIQKRESLLGRLEWFEQQAS 741
Cdd:pfam03999 286 IEDLRVEIEELWDKLFYSTEQRKRFIPFFEelytedllelHELELKRLKEEYESNKEILELVEKWEELWEDMEELEAKAN 365

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  742 DPNRFfqkpdllMNR----LLEENRFRSYLQRKLNRMESNLVSLLERIESVFGEPVTFKGRSYLKKMKQDKVE-MLYWLQ 816
Cdd:pfam03999 366 DPSRF-------NNRggklLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEIIAEQWEElRQEKER 438

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 148536851  817 QQRRIRNLTQAQKTFRQSCTFtgsSSQALVAPGNTPTTH 855
Cdd:pfam03999 439 ERLSQRKKLKGSKQTEREMLY---GSAPNSTLHRTPSKL 474
 
Name Accession Description Interval E-value
MAP65_ASE1 pfam03999
Microtubule associated protein (MAP65/ASE1 family);
672-855 8.65e-11

Microtubule associated protein (MAP65/ASE1 family);


Pssm-ID: 427641 [Multi-domain]  Cd Length: 477  Bit Score: 65.02  E-value: 8.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  672 IHNLQQRLKRLWVMLEVPEQNRLDMVIKYS----------SNARLQQLPALIKAWEQVLKPIQKRESLLGRLEWFEQQAS 741
Cdd:pfam03999 286 IEDLRVEIEELWDKLFYSTEQRKRFIPFFEelytedllelHELELKRLKEEYESNKEILELVEKWEELWEDMEELEAKAN 365

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 148536851  742 DPNRFfqkpdllMNR----LLEENRFRSYLQRKLNRMESNLVSLLERIESVFGEPVTFKGRSYLKKMKQDKVE-MLYWLQ 816
Cdd:pfam03999 366 DPSRF-------NNRggklLLKEEKERKRLTRKLPKIEQELTEKVEAWESEFGRPFLVNGEKLLEIIAEQWEElRQEKER 438

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 148536851  817 QQRRIRNLTQAQKTFRQSCTFtgsSSQALVAPGNTPTTH 855
Cdd:pfam03999 439 ERLSQRKKLKGSKQTEREMLY---GSAPNSTLHRTPSKL 474
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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