|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
810-1422 |
8.73e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 106.29 E-value: 8.73e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 810 LVAREQEIAAVQARMQASYRDHVKEVQQLQGKIRTLQEQLEnGPNTQLARLQQENSILRDALNQATSQVeSKQNTELAKL 889
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANEI-SRLEQQKQIL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 890 RQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASH-----------------KESEEALQKRLEEVTRE 952
Cdd:TIGR02168 308 RERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELesleaeleeleaeleelESRLEELEEQLETLRSK 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 953 LCRAQTSHANLRADAEKAQEQQQRVAELHSKLQS--SEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQ 1030
Cdd:TIGR02168 388 VAQLELQIASLNNEIERLEARLERLEDRRERLQQeiEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELR 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1031 AQDTQASHA------EANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDL---------REKNWKAMEAlalaer 1095
Cdd:TIGR02168 468 EELEEAEQAldaaerELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILgvlselisvDEGYEAAIEA------ 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1096 ACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISA------HQNYAEWLQEFKEKGSELLKKPPTLEPSMD-- 1167
Cdd:TIGR02168 542 ALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGteiqgnDREILKNIEGFLGVAKDLVKFDPKLRKALSyl 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1168 -----IVLKLREAEETQNSLQAEcdqYRTILAE--------------TEGMLKDLQKSVEEEERvwKAKVGAAEEELHKS 1228
Cdd:TIGR02168 622 lggvlVVDDLDNALELAKKLRPG---YRIVTLDgdlvrpggvitggsAKTNSSILERRREIEEL--EEKIEELEEKIAEL 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1229 RVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDE 1308
Cdd:TIGR02168 697 EKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEE 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1309 LALLKTQLERTEATLEAEQTRRQKLTAEFEEAqrtacriQEELEKLRaagplessgkEEITQLKERLEKEKRLTSDLGRA 1388
Cdd:TIGR02168 777 LAEAEAEIEELEAQIEQLKEELKALREALDEL-------RAELTLLN----------EEAANLRERLESLERRIAATERR 839
|
650 660 670
....*....|....*....|....*....|....
gi 568918950 1389 AIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAED 1422
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
821-1412 |
2.01e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.55 E-value: 2.01e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 821 QARMQASYRDHVKEVQQLQG-----KIRTLQEQLENGpNTQLARLQQENSILRDALNQATSQVESKQNtELAKLRQELSK 895
Cdd:COG1196 208 QAEKAERYRELKEELKELEAellllKLRELEAELEEL-EAELEELEAELEELEAELAELEAELEELRL-ELEELELELEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 896 VNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQ 975
Cdd:COG1196 286 AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 976 RVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQV 1055
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1056 ScLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERAcEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSI 1135
Cdd:COG1196 446 E-AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE-LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1136 SAHQNYAEWLQEFKEKGSELLkkpptLEPSMDIVLKLREAEETQNSLQAECDQYR-TILAETEGMLKDLQKSVEEEERVW 1214
Cdd:COG1196 524 GAVAVLIGVEAAYEAALEAAL-----AAALQNIVVEDDEVAAAAIEYLKAAKAGRaTFLPLDKIRARAALAAALARGAIG 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1215 KAKVGAAEEELHKSRVTVKHLEDIVEK--LKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQ 1292
Cdd:COG1196 599 AAVDLVASDLREADARYYVLGDTLLGRtlVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1293 SQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLR--------AAGPLESSG 1364
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELleeeelleEEALEELPE 758
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 568918950 1365 KEEITQLKERLEKEKRLTSDLGR---AAIKLQELLKTTQEQLTKEKDTVKK 1412
Cdd:COG1196 759 PPDLEELERELERLEREIEALGPvnlLAIEEYEELEERYDFLSEQREDLEE 809
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
910-1421 |
2.54e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.07 E-value: 2.54e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 910 EEQQRKALEAKAATFEKQVLQLQA------SHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSK 983
Cdd:COG1196 206 ERQAEKAERYRELKEELKELEAELlllklrELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 984 LQSSEVEVKSKCEEL----SSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQAShAEANQQQTRLKELESQVSCLE 1059
Cdd:COG1196 286 AQAEEYELLAELARLeqdiARLEERRRELEERLEELEEELAELEEELEELEEELEELE-EELEEAEEELEEAEAELAEAE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1060 KETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLH-LAEAQTKETLLALLPGLSISAH 1138
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEeLEELEEALAELEEEEEEEEEAL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1139 QNYAEWLQEFKEKGSELLKKpptlepsmdiVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKV 1218
Cdd:COG1196 445 EEAAEEEAELEEEEEALLEL----------LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1219 GAAEEELHKSRVTVkhLEDIVEKLKGELESSDQVREHTSHLEAElekhmaAASAECQNYAKEVAGLR----QLLLESQSQ 1294
Cdd:COG1196 515 LLAGLRGLAGAVAV--LIGVEAAYEAALEAALAAALQNIVVEDD------EVAAAAIEYLKAAKAGRatflPLDKIRARA 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1295 LDEAKSEAQKQSDELALLKTQLERTEATLEAEQTR---RQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEIT-Q 1370
Cdd:COG1196 587 ALAAALARGAIGAAVDLVASDLREADARYYVLGDTllgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGgS 666
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 568918950 1371 LKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAE 1421
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL 717
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
747-1357 |
3.96e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.22 E-value: 3.96e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 747 WHKATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQA 826
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 827 SYRdhvkEVQQLQGKIRTLQEQLENgpntqlarLQQENSILRDALNQATSQVESKQNtELAKLRQELSKVNKELVEKSEA 906
Cdd:COG1196 314 LEE----RLEELEEELAELEEELEE--------LEEELEELEEELEEAEEELEEAEA-ELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 907 SRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQS 986
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 987 SEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELK 1066
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1067 EAMEQQKGKNNDLREknwkAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQNYAEWLQ 1146
Cdd:COG1196 541 EAALAAALQNIVVED----DEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYY 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1147 EFkekGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAEcdqyRTILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELH 1226
Cdd:COG1196 617 VL---GDTLLGRTLVAARLEAALRRAVTLAGRLREVTLE----GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1227 KSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKqs 1306
Cdd:COG1196 690 EEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELER-- 767
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 568918950 1307 dELALLKTQLERTEA-------TLEAEQTRRQKLTAEFEEaqrtacrIQEELEKLRAA 1357
Cdd:COG1196 768 -ELERLEREIEALGPvnllaieEYEELEERYDFLSEQRED-------LEEARETLEEA 817
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
828-1394 |
2.38e-14 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 78.42 E-value: 2.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 828 YRDHVKEVQQLQGKIRTLQEQLE--NGPNTQLARLQQENSILRDALNQATSQVESKQntELAKLRQELSKVN-----KEL 900
Cdd:COG4913 213 VREYMLEEPDTFEAADALVEHFDdlERAHEALEDAREQIELLEPIRELAERYAAARE--RLAELEYLRAALRlwfaqRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 901 VEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQ----KRLEEVTRELCRAQTSHANLRadaEKAQEQQQR 976
Cdd:COG4913 291 ELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRgnggDRLEQLEREIERLERELEERE---RRRARLEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 977 VAELHSKLQSSEvevkskcEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQashaEANQQQTRLKELESQVS 1056
Cdd:COG4913 368 LAALGLPLPASA-------EEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRR----ELRELEAEIASLERRKS 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1057 CLEKETSELKEAMEqqkgknndlreknwkamEALALAER----ACEeklrsLTQAKEES-------EKQLH------LAE 1119
Cdd:COG4913 437 NIPARLLALRDALA-----------------EALGLDEAelpfVGE-----LIEVRPEEerwrgaiERVLGgfaltlLVP 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1120 AQTKETLLALLPGLSISAHQNYaewlqeFKEKGSELLKKPPTLEPSmDIVLKLrEAEET--QNSLQAEC-DQYRTILAET 1196
Cdd:COG4913 495 PEHYAAALRWVNRLHLRGRLVY------ERVRTGLPDPERPRLDPD-SLAGKL-DFKPHpfRAWLEAELgRRFDYVCVDS 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1197 EGMLKDLQKSVEEE------------------ERVW------KAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQV 1252
Cdd:COG4913 567 PEELRRHPRAITRAgqvkgngtrhekddrrriRSRYvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQER 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1253 REHTSHLE---------AELEKHMAAASAECQNYAKEVAGLRQLllesQSQLDEAKSEAQKQSDELALLKTQLERTEATL 1323
Cdd:COG4913 647 REALQRLAeyswdeidvASAEREIAELEAELERLDASSDDLAAL----EEQLEELEAELEELEEELDELKGEIGRLEKEL 722
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1324 EAEQTRRQKLTAEFEEAQRTACRIQ-EELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQE 1394
Cdd:COG4913 723 EQAEEELDELQDRLEAAEDLARLELrALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMR 794
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
760-1420 |
7.61e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.02 E-value: 7.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 760 LKRQLEEKEK-LLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARM---QASYRDHVKEV 835
Cdd:TIGR02168 218 LKAELRELELaLLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIeelQKELYALANEI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 836 QQLQGKIRTLQEQLEN------GPNTQLARLQQENSILRDALNQATSQVESKQN---------TELAKLRQELSKVNKEL 900
Cdd:TIGR02168 298 SRLEQQKQILRERLANlerqleELEAQLEELESKLDELAEELAELEEKLEELKEelesleaelEELEAELEELESRLEEL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 901 VEKSEASR----QEEQQRKALEAKAATFEKQVLQLQASHKESEE---------------ALQKRLEEVTRELCRAQTSHA 961
Cdd:TIGR02168 378 EEQLETLRskvaQLELQIASLNNEIERLEARLERLEDRRERLQQeieellkkleeaelkELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 962 NLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKC-------EELSSLHGQLKEARAENSQLT-------ERIR------- 1020
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLdslerlqENLEGFSEGVKALLKNQSGLSgilgvlsELISvdegyea 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1021 SIEALL-------------EAGQAQDTQASH------------------------------------------------- 1038
Cdd:TIGR02168 538 AIEAALggrlqavvvenlnAAKKAIAFLKQNelgrvtflpldsikgteiqgndreilkniegflgvakdlvkfdpklrka 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1039 --------------AEANQQQTRLKELESQVS------------------------CLEKETSELKEAMEQQKGKNNDLR 1080
Cdd:TIGR02168 618 lsyllggvlvvddlDNALELAKKLRPGYRIVTldgdlvrpggvitggsaktnssilERRREIEELEEKIEELEEKIAELE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1081 eknwKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQNYAewLQEFKEKGSELLKKPP 1160
Cdd:TIGR02168 698 ----KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE--LTELEAEIEELEERLE 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1161 TLEPsmdivlKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEervwkakvgaaEEELHKSRVTVKHLEDIVE 1240
Cdd:TIGR02168 772 EAEE------ELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLL-----------NEEAANLRERLESLERRIA 834
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1241 KLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTE 1320
Cdd:TIGR02168 835 ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1321 ATLEAEQTRRQKLTAEFEEAQRTACRIQEELEK-----LRAAGPLESSGKEEITQLKERLEKEKRLTSDLGR---AAIKL 1392
Cdd:TIGR02168 915 RELEELREKLAQLELRLEGLEVRIDNLQERLSEeysltLEEAEALENKIEDDEEEARRRLKRLENKIKELGPvnlAAIEE 994
|
810 820
....*....|....*....|....*...
gi 568918950 1393 QELLKTTQEQLTKEKDTVKKLQEQLGKA 1420
Cdd:TIGR02168 995 YEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
861-1428 |
1.25e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 76.33 E-value: 1.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 861 QQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKElVEKSEASRQEEQQRKALEAKAATFEKQV-----LQLQASH 935
Cdd:PTZ00121 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEE-ARKAEDARKAEEARKAEDAKRVEIARKAedarkAEEARKA 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 936 KESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKeaRAENSQL 1015
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAK--KAEEERN 1250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1016 TERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLR---EKNWKAMEALAL 1092
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKkadEAKKKAEEAKKK 1330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1093 AERA---CEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIV 1169
Cdd:PTZ00121 1331 ADAAkkkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL 1410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1170 LKLREAEETQNSLQAECDQYRTI------------------LAETEGMLKDLQKSVEEEERVWKAKVGAAE----EELHK 1227
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKAdeakkkaeeakkadeakkKAEEAKKAEEAKKKAEEAKKADEAKKKAEEakkaDEAKK 1490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1228 SRVTVKHLEDIVEKLKGELESSDQVREHTSHLEA-ELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQS 1306
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKAdEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAK 1570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1307 DELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACR--IQEELEKLRAAG-PLESSGKEEITQLKERLEKEKRLTS 1383
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEeaKKAEEAKIKAEElKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 568918950 1384 DLGRA----AIKLQELLKTTQE------QLTKEKDTVKKLQEQLGKAEDGSSSKE 1428
Cdd:PTZ00121 1651 ELKKAeeenKIKAAEEAKKAEEdkkkaeEAKKAEEDEKKAAEALKKEAEEAKKAE 1705
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
827-1395 |
3.89e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 74.33 E-value: 3.89e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 827 SYRDHVKEVQQLQGKIRTLQEQLEngpntqlaRLQQENSILRDALNQATSQVEskqntELAKLRQELSKVNKELVEKSEA 906
Cdd:PRK03918 180 RLEKFIKRTENIEELIKEKEKELE--------EVLREINEISSELPELREELE-----KLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 907 SRQEEQQRKALEAKAATFEKQVLQLqashKESEEALQKRLEEVTrELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQS 986
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEERIEEL----KKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 987 SEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAgqAQDTQASHAEANQQQTRLK-----ELESQVSCLEKE 1061
Cdd:PRK03918 322 EINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHEL--YEEAKAKKEELERLKKRLTgltpeKLEKELEELEKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1062 TSELKEAMEQQKGKNNDLREKN---WKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLpglsisah 1138
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIkelKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEI-------- 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1139 QNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNS-----LQAECDQYRTI---LAETEGMLKDLQKSVEEE 1210
Cdd:PRK03918 472 EEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKynleeLEKKAEEYEKLkekLIKLKGEIKSLKKELEKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1211 ERVwKAKVGAAEEELHKSRVTVKHLEDIVEKLKgeLESSDQVREHTSHLEAELEKHMAAASAEcqnyakevaglrQLLLE 1290
Cdd:PRK03918 552 EEL-KKKLAELEKKLDELEEELAELLKELEELG--FESVEELEERLKELEPFYNEYLELKDAE------------KELER 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1291 SQSQLDEAKSEAQKQSDELALLKTQLERTEATLEA-----EQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGK 1365
Cdd:PRK03918 617 EEKELKKLEEELDKAFEELAETEKRLEELRKELEElekkySEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTL 696
|
570 580 590
....*....|....*....|....*....|
gi 568918950 1366 EEITQLKERLEKEKRLTSDLGRAAIKLQEL 1395
Cdd:PRK03918 697 EKLKEELEEREKAKKELEKLEKALERVEEL 726
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
874-1422 |
8.15e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.56 E-value: 8.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 874 ATSQVESKQNTELAKLRQELSKVNKElVEKSEASRQE----EQQRKALEAKAATFEKQVLQLQASHKESEEALqKRLEEV 949
Cdd:PRK03918 204 EVLREINEISSELPELREELEKLEKE-VKELEELKEEieelEKELESLEGSKRKLEEKIRELEERIEELKKEI-EELEEK 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 950 TRELCRAQ---TSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALL 1026
Cdd:PRK03918 282 VKELKELKekaEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERH 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1027 EAgqAQDTQASHAEANQQQTRLK-----ELESQVSCLEKETSELKEAMEQQKGKNNDLREKNW---KAMEALALAERACE 1098
Cdd:PRK03918 362 EL--YEEAKAKKEELERLKKRLTgltpeKLEKELEELEKAKEEIEEEISKITARIGELKKEIKelkKAIEELKKAKGKCP 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1099 EKLRSLTQakeesEKQLHLAEAQTKETllallpglsisahQNYAEWLQEFKEKGSELLKKPPTLEpsmdivlKLREAEET 1178
Cdd:PRK03918 440 VCGRELTE-----EHRKELLEEYTAEL-------------KRIEKELKEIEEKERKLRKELRELE-------KVLKKESE 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1179 QNSLQAECDQYRTILAETEGM-LKDLQKSVEEEERVwKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTS 1257
Cdd:PRK03918 495 LIKLKELAEQLKELEEKLKKYnLEELEKKAEEYEKL-KEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELA 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1258 HLEAELEKHMAAASAECQNYAKEVAGLRQLLLEsqsqLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEF 1337
Cdd:PRK03918 574 ELLKELEELGFESVEELEERLKELEPFYNEYLE----LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1338 EEAQRTACriQEELEKLRAagpLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLkttqEQLTKEKDTVKKLQEQL 1417
Cdd:PRK03918 650 EELEKKYS--EEEYEELRE---EYLELSRELAGLRAELEELEKRREEIKKTLEKLKEEL----EEREKAKKELEKLEKAL 720
|
....*
gi 568918950 1418 GKAED 1422
Cdd:PRK03918 721 ERVEE 725
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
260-513 |
3.44e-12 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 71.57 E-value: 3.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 260 KGEGGQNQAKkGEGAQNQGKKGEGAQnqGKKGEGAQNQAKKGEGAQNQAK-KGEGAQNQGKKGEGAQNQSKKGEGAQNqa 338
Cdd:TIGR00927 632 KGDVAEAEHT-GERTGEEGERPTEAE--GENGEESGGEAEQEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADH-- 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 339 kKGEGGQNQAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQ 418
Cdd:TIGR00927 707 -KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQA 785
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 419 GK----KGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQ-GKKGEGAQNQGKKGE 493
Cdd:TIGR00927 786 GEdgemKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEkGVDGGGGSDGGDSEE 865
|
250 260
....*....|....*....|
gi 568918950 494 GAQNQGKKGEGAQNQGKKGE 513
Cdd:TIGR00927 866 EEEEEEEEEEEEEEEEEEEE 885
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
757-1432 |
4.27e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 71.33 E-value: 4.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQ 836
Cdd:PTZ00121 1154 VEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAE 1233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 QLQGKIRTLQeQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNK-----ELVEKSEASRQEE 911
Cdd:PTZ00121 1234 EAKKDAEEAK-KAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEakkaeEKKKADEAKKKAE 1312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 912 QQRKALEAK--AATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEV 989
Cdd:PTZ00121 1313 EAKKADEAKkkAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKK 1392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 990 --EVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKElESQVSCLEKETSELKE 1067
Cdd:PTZ00121 1393 adEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE-AKKAEEAKKKAEEAKK 1471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1068 AME-----QQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQlhlAEAQTKETLLALLPGLSISAHQNYA 1142
Cdd:PTZ00121 1472 ADEakkkaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKK---ADEAKKAEEAKKADEAKKAEEKKKA 1548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1143 EWLQEFKE--KGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTiLAETEGMLKDLQKSVEEEERVWKAKVGA 1220
Cdd:PTZ00121 1549 DELKKAEElkKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMK-LYEEEKKMKAEEAKKAEEAKIKAEELKK 1627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1221 AEEELhksrvtvKHLEDIVEKLKGELESSDQVREHTSHLEAELEKhMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKS 1300
Cdd:PTZ00121 1628 AEEEK-------KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAE-EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAE 1699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1301 EAQKQSDELALLKTQLERTEATLEAEQTRRQKLtaefEEAQRTACRIQEELEKLRaagpLESSGKEEITQLKERLEKEKR 1380
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKA----EEAKKEAEEDKKKAEEAK----KDEEEKKKIAHLKKEEEKKAE 1771
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1381 LTSDLGRAAIKlQELLKTTQEQLTKEKDTVKKLQEQLGKAEDGssSKEGTSV 1432
Cdd:PTZ00121 1772 EIRKEKEAVIE-EELDEEDEKRRMEVDKKIKDIFDNFANIIEG--GKEGNLV 1820
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
868-1416 |
5.61e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.84 E-value: 5.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 868 RDALNQATSQVESKQNTE----LAKLRQELSKVNKELVEKSEasrQEEQQRKALEAKAATFEkqvlqlqaSHKESEEALQ 943
Cdd:PRK02224 186 RGSLDQLKAQIEEKEEKDlherLNGLESELAELDEEIERYEE---QREQARETRDEADEVLE--------EHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 944 kRLEEVTRELCRAQTSHANLRAD-AEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRsi 1022
Cdd:PRK02224 255 -TLEAEIEDLRETIAETEREREElAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLE-- 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1023 EALLEAGQAQDTQASHAE-ANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEkL 1101
Cdd:PRK02224 332 ECRVAAQAHNEEAESLREdADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGN-A 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1102 RSLTQAKEESEKQLHLAEAQTKETLlallpglsisahqnyaEWLQEFKEKGSELLK--KPPTLEPSMD---IVLKLREAE 1176
Cdd:PRK02224 411 EDFLEELREERDELREREAELEATL----------------RTARERVEEAEALLEagKCPECGQPVEgspHVETIEEDR 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1177 ETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVwkakvgaaEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHT 1256
Cdd:PRK02224 475 ERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRI--------ERLEERREDLEELIAERRETIEEKRERAEELRERA 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1257 SHLEAELEKHMAAASaecqnyakevaglrqlllesqsqldeaksEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAE 1336
Cdd:PRK02224 547 AELEAEAEEKREAAA-----------------------------EAEEEAEEAREEVAELNSKLAELKERIESLERIRTL 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1337 FEEAQRTACRIQEELEKLRAAGPLESSGKEeitQLKERLEKEKRLTSDLGRAAI-KLQELLKTTQEQLTKEKDTVKKLQE 1415
Cdd:PRK02224 598 LAAIADAEDEIERLREKREALAELNDERRE---RLAEKRERKRELEAEFDEARIeEAREDKERAEEYLEQVEEKLDELRE 674
|
.
gi 568918950 1416 Q 1416
Cdd:PRK02224 675 E 675
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
310-576 |
6.72e-12 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 70.41 E-value: 6.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 310 KGEGAQNQgKKGEGAQNQSKKGEGAQnqAKKGEGGQNQAKKGEGAQNqakKGEGAQNQAKKGEGVQNQAKKGVEGAQNQG 389
Cdd:TIGR00927 632 KGDVAEAE-HTGERTGEEGERPTEAE--GENGEESGGEAEQEGETET---KGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 390 KKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDK-KIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGaqnQ 468
Cdd:TIGR00927 706 HKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG---E 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 469 GKKGEGAQNQGKKGE--GAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQGKKGEGAQ 546
Cdd:TIGR00927 783 IQAGEDGEMKGDEGAegKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGD 862
|
250 260 270
....*....|....*....|....*....|
gi 568918950 547 NQGKKGEGAQNQGKKAEGVQSQSKKGEGTQ 576
Cdd:TIGR00927 863 SEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
360-593 |
8.10e-12 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 70.41 E-value: 8.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 360 KGEGAQNQAKkGEGVQNQAKKGVEGaqnQGKKGEANQNQAKKGEGGQNQTK-KGEGPQNQGKKGEAAQKQDKKIEGAQNQ 438
Cdd:TIGR00927 632 KGDVAEAEHT-GERTGEEGERPTEA---EGENGEESGGEAEQEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADHK 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 439 GKKPEGtsnQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGK-KGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQN 517
Cdd:TIGR00927 708 GETEAE---EVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQ 784
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568918950 518 QGKKGE--GPQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGE 593
Cdd:TIGR00927 785 AGEDGEmkGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGD 862
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
192-443 |
9.44e-12 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 70.02 E-value: 9.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 192 PATSSQGKKGQGAQNQAKKGEGAQNQGK-KGEGAQNQAKKGEGAQNQAKKGEGAQNqgkKGEGAQNQAKKGEGGQNQAKK 270
Cdd:TIGR00927 651 RPTEAEGENGEESGGEAEQEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADH---KGETEAEEVEHEGETEAEGTE 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 271 GEGAQNQGKKGEGAQNQGK-KGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGaqnQSKKGEGAQNQAKKGEGGQNQAK 349
Cdd:TIGR00927 728 DEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG---EIQAGEDGEMKGDEGAEGKVEHE 804
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 350 KGEGAQNQAKKGEGAQNQAKKGEGvqnqakKGVEGAQNQGKKgeaNQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQD 429
Cdd:TIGR00927 805 GETEAGEKDEHEGQSETQADDTEV------KDETGEQELNAE---NQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEE 875
|
250
....*....|....
gi 568918950 430 KKIEGAQNQGKKPE 443
Cdd:TIGR00927 876 EEEEEEEEEEEEEE 889
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
188-685 |
9.67e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 9.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 188 KASSPATSSQGKKGQGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNqgKKGEGAQNQAKKGEGGQNQ 267
Cdd:PTZ00121 1291 KADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAK--AEAEAAADEAEAAEEKAEA 1368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 268 AKKGEgaQNQGKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEggqnQ 347
Cdd:PTZ00121 1369 AEKKK--EEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE----E 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 348 AKKGEGAQNQAKKGEGAQNQAKKGEgvqnqAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQK 427
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKKAE-----EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKK 1517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 428 QDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKgegAQNQGKKGEGAQN 507
Cdd:PTZ00121 1518 AEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALR---KAEEAKKAEEARI 1594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 508 QGKKGEGAQNQGKKGEgpqnQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG----KKAEGVQSQSKKGEGTQNQ-GKKG 582
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAE----EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaeekKKAEELKKAEEENKIKAAEeAKKA 1670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 583 DGNPNQGKKGEGASNQNRKTDTVANQGTKQEGVSNQVKKSEGSpnQGKKAEGAPNQGKKKDGSPSQAKKvDAAANQGKKS 662
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAE--EKKKAEELKKAEEENKIKAEEAKK-EAEEDKKKAE 1747
|
490 500
....*....|....*....|...
gi 568918950 663 EMAPAQGQKASMVQSQEAPKQDA 685
Cdd:PTZ00121 1748 EAKKDEEEKKKIAHLKKEEEKKA 1770
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
914-1425 |
3.36e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 68.40 E-value: 3.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 914 RKALEAKAATFEKQVLQLQASHKESEEALQKR--LEEvtrelcraqtshanLRADAEKAQEQQQRVAELHSKLQSSEVEV 991
Cdd:COG4913 220 EPDTFEAADALVEHFDDLERAHEALEDAREQIelLEP--------------IRELAERYAAARERLAELEYLRAALRLWF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 992 KSKCEELssLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQ 1071
Cdd:COG4913 286 AQRRLEL--LEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1072 QKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQ------TKETLLALLPGLSiSAHQNYAEWL 1145
Cdd:COG4913 364 LEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAlrdlrrELRELEAEIASLE-RRKSNIPARL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1146 QEFKEKGSELLKKPPTlepSMDIV---LKLREAEET-QNSL------QAecdqyRTILAEtEGMLKDLQKSVEE---EER 1212
Cdd:COG4913 443 LALRDALAEALGLDEA---ELPFVgelIEVRPEEERwRGAIervlggFA-----LTLLVP-PEHYAAALRWVNRlhlRGR 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1213 VWKAKVGAAEEELHKSRVTVKHLediVEKLK-------GELEssDQVREHTSHL----EAELEKHMAAASAECQNYAKEV 1281
Cdd:COG4913 514 LVYERVRTGLPDPERPRLDPDSL---AGKLDfkphpfrAWLE--AELGRRFDYVcvdsPEELRRHPRAITRAGQVKGNGT 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1282 AG--------LRQLLL--ESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTA---------EFEEAQR 1342
Cdd:COG4913 589 RHekddrrriRSRYVLgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaeyswdeiDVASAER 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1343 TACRIQEELEKLRAAGPlessgkeEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAED 1422
Cdd:COG4913 669 EIAELEAELERLDASSD-------DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
...
gi 568918950 1423 GSS 1425
Cdd:COG4913 742 LAR 744
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
922-1407 |
4.94e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 67.49 E-value: 4.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 922 ATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQS--SEVEVKSKCEELS 999
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEElrEELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1000 SLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRlkelESQVSCLEKETSELKEAMEQQKGKNNDL 1079
Cdd:COG4717 129 PLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQ----EELEELLEQLSLATEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1080 REKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQnyaewlqefkekGSELLKKP 1159
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGL------------GGSLLSLI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1160 PTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQksvEEEERVWKAKVGAAEEElhkSRVTVKHLEDIV 1239
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELE---EEELEELLAALGLPPDL---SPEELLELLDRI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1240 EKLKGELESSDQVREH--TSHLEAELEKHMAAASAE-------CQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSD--E 1308
Cdd:COG4717 347 EELQELLREAEELEEElqLEELEQEIAALLAEAGVEdeeelraALEQAEEYQELKEELEELEEQLEELLGELEELLEalD 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1309 LALLKTQLERTEATLEAEQTRRQKLTAEFEEaqrtacrIQEELEKLRAAGPLessgkEEITQLKERLEKEKRLTSDLGRA 1388
Cdd:COG4717 427 EEELEEELEELEEELEELEEELEELREELAE-------LEAELEQLEEDGEL-----AELLQELEELKAELRELAEEWAA 494
|
490
....*....|....*....
gi 568918950 1389 AIKLQELLKTTQEQLTKEK 1407
Cdd:COG4717 495 LKLALELLEEAREEYREER 513
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1171-1426 |
4.98e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 4.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1171 KLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEE---EERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELE 1247
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEaqaEEYELLAELARLEQDIARLEERRRELEERLEELEEELA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1248 SSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLES-------QSQLDEAKSEAQKQSDELALLKTQLERTE 1320
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAeaelaeaEEELEELAEELLEALRAAAELAAQLEELE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1321 ATLEAEQTRRQKLTAEFEEAQRtacRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQ 1400
Cdd:COG1196 407 EAEEALLERLERLEEELEELEE---ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
250 260
....*....|....*....|....*.
gi 568918950 1401 EQLTKEKDTVKKLQEQLGKAEDGSSS 1426
Cdd:COG1196 484 EELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
785-1259 |
9.07e-11 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 66.33 E-value: 9.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 785 LRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARmQASYRDHVKEVQQLQGKIRTLQEQLENgPNTQLARLQQEN 864
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEK-EEEYAELQEELEELEEELEELEAELEE-LREELEKLEKLL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 865 SILRDA--LNQATSQVESKQnTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEAL 942
Cdd:COG4717 126 QLLPLYqeLEALEAELAELP-ERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 943 QKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELhsklqssevEVKSKCEELSSLHGQLKEARAENSQLTERIRSI 1022
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALE---------ERLKEARLLLLIAAALLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1023 EAL------LEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERA 1096
Cdd:COG4717 276 AGVlflvlgLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1097 CEEKLRSLTQAKEESEKQ--LHLAEAQTKETLLALLpglsiSAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIV----- 1169
Cdd:COG4717 356 AEELEEELQLEELEQEIAalLAEAGVEDEEELRAAL-----EQAEEYQELKEELEELEEQLEELLGELEELLEALdeeel 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1170 -LKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVE------EEERVwKAKVGAAEEELHKSRVTVKHLEDIVEKL 1242
Cdd:COG4717 431 eEELEELEEELEELEEELEELREELAELEAELEQLEEDGElaellqELEEL-KAELRELAEEWAALKLALELLEEAREEY 509
|
490
....*....|....*..
gi 568918950 1243 kgELESSDQVREHTSHL 1259
Cdd:COG4717 510 --REERLPPVLERASEY 524
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
220-503 |
9.36e-11 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 66.94 E-value: 9.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 220 KGEGAQNQAKkGEGAQNQAKKGEGAQnqGKKGEGAQNQAKKGEGGQNQAK-KGEGAQNQGKKGEGAQNQGKKGEGAQNqa 298
Cdd:TIGR00927 632 KGDVAEAEHT-GERTGEEGERPTEAE--GENGEESGGEAEQEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADH-- 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 299 kKGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEgaqnqaKKGEGGQNQAKKGEGAQNQAKKGEGAQNQAKKGEGvqnqa 378
Cdd:TIGR00927 707 -KGETEAEEVEHEGETEAEGTEDEGEIETGEEGE------EVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEG----- 774
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 379 kkgvEGAQNQGkkgeanqnQAKKGEGGQNqtkKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQ 458
Cdd:TIGR00927 775 ----KEDEDEG--------EIQAGEDGEM---KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNA 839
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 568918950 459 GKKGEGAQNQ-GKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGE 503
Cdd:TIGR00927 840 ENQGEAKQDEkGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEE 885
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
829-1417 |
1.23e-10 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 66.40 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 829 RDHVKEVQQLQGKIRTLQEQLENgPNTQLARLQQENSILRDALNQATSQVESKQnTELAKLRQELSKVNKELVEKSEASR 908
Cdd:pfam12128 230 IQAIAGIMKIRPEFTKLQQEFNT-LESAELRLSHLHFGYKSDETLIASRQEERQ-ETSAELNQLLRTLDDQWKEKRDELN 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 909 QE-----------EQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEK-----AQE 972
Cdd:pfam12128 308 GElsaadaavakdRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRrrskiKEQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 973 QQQRVAELHSKLQSS-EVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEA------GQAQDTQASHAEANQQQ 1045
Cdd:pfam12128 388 NNRDIAGIKDKLAKIrEARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSrlgelkLRLNQATATPELLLQLE 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1046 TRLKELESQVSCLEKETSELKEAMEQQKgknnDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHlaeaqtkeT 1125
Cdd:pfam12128 468 NFDERIERAREEQEAANAEVERLQSELR----QARKRRDQASEALRQASRRLEERQSALDELELQLFPQAG--------T 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1126 LLALLpglsisaHQNYAEWLQEF-KEKGSELLKKpPTLEPSMDIV----------LKLREAEETQNSLQAECDQYRTILA 1194
Cdd:pfam12128 536 LLHFL-------RKEAPDWEQSIgKVISPELLHR-TDLDPEVWDGsvggelnlygVKLDLKRIDVPEWAASEEELRERLD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1195 ETEGML---KDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELES------------SDQVREHTSHL 1259
Cdd:pfam12128 608 KAEEALqsaREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSekdkknkalaerKDSANERLNSL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1260 EAELE----KHMAA----------ASAECQNYAKEVAGLRQLLLesqSQLDEAKSEAQKQSD-ELALLKTQLERTEATLE 1324
Cdd:pfam12128 688 EAQLKqldkKHQAWleeqkeqkreARTEKQAYWQVVEGALDAQL---ALLKAAIAARRSGAKaELKALETWYKRDLASLG 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1325 AEQTRRQKLTAEFEEAQRTACRI-QEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQL 1403
Cdd:pfam12128 765 VDPDVIAKLKREIRTLERKIERIaVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKL 844
|
650
....*....|....
gi 568918950 1404 TKEKDTVKKLQEQL 1417
Cdd:pfam12128 845 EMERKASEKQQVRL 858
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
378-597 |
1.30e-10 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 66.17 E-value: 1.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 378 AKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEgAQNQGKKPEGTSNQGK----KGE 453
Cdd:TIGR00927 631 SKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIP-AERKGEQEGEGEIEAKeadhKGE 709
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 454 GAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGK-KGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEG----PQNQ 528
Cdd:TIGR00927 710 TEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGeiqaGEDG 789
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 529 AKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGKKGDG-NPNQGKKGEGASN 597
Cdd:TIGR00927 790 EMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAkQDEKGVDGGGGSD 859
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
204-698 |
1.36e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.32 E-value: 1.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 204 AQNQAKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAKkgegAQNQGKKGEG 283
Cdd:PTZ00121 1208 AEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIK----AEEARKADEL 1283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 284 AQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQnqAKKGEG 363
Cdd:PTZ00121 1284 KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA--ADEAEA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 364 AQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPE 443
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE 1441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 444 gtsnQGKKGEGAQNQGKKGEGAQNQGKKGEgaqnQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGE 523
Cdd:PTZ00121 1442 ----EAKKADEAKKKAEEAKKAEEAKKKAE----EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD 1513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 524 GPQN--QAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGEGASNQNRK 601
Cdd:PTZ00121 1514 EAKKaeEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 602 TDTVANQGTKQEGV-SNQVKKSEGSPNQGKKAEGAPNQGKKKDGSPSQAKKVDAAANQGKKSEMAPAQGQKASMVQSQEA 680
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMkAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED 1673
|
490
....*....|....*...
gi 568918950 681 PKQDAPAKKKSGSRKKGE 698
Cdd:PTZ00121 1674 KKKAEEAKKAEEDEKKAA 1691
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
33-168 |
2.40e-10 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 60.14 E-value: 2.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 33 MKETSYEEALANQRKEMAKTHhQKGEKKKKEKTVEKKGKTKKKEEKPNGKIPEHDLDPNVTIILKE---PVRVSAVAVAP 109
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTP-TEKEKKKKEKKKEKKKKSKKKEEKPNGKLPESEQADESEEEPREfktPDEAPSAALEP 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568918950 110 TSVhSSVGHTPIATVPAMPQEKLASSPKDRKKKEKKVAKVEPAVSSIVNSIQVLASKSA 168
Cdd:pfam05104 80 EPV-PTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEAVQPKPALEKEE 137
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
757-1422 |
3.27e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.09 E-value: 3.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLE--EKEKLLATEQEDAavaKSKLRELN-KEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQ---ASYRD 830
Cdd:TIGR02169 193 IDEKRQQLErlRREREKAERYQAL---LKEKREYEgYELLKEKEALERQKEAIERQLASLEEELEKLTEEISeleKRLEE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 831 HVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNtELAKLRQELSKVnKELVEKSEASRQE 910
Cdd:TIGR02169 270 IEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEE-RLAKLEAEIDKL-LAEIEELEREIEE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 911 EQQRKA-----LEAKAATFEKQVLQLQASHKESEE------ALQKRLEEVTRELCRAQTshaNLRADAEKAQEQQQRVAE 979
Cdd:TIGR02169 348 ERKRRDklteeYAELKEELEDLRAELEEVDKEFAEtrdelkDYREKLEKLKREINELKR---ELDRLQEELQRLSEELAD 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 980 LHSKLQSSEvevkskcEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQAShAEANQQQTRLKELESQVSCLE 1059
Cdd:TIGR02169 425 LNAAIAGIE-------AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLK-EEYDRVEKELSKLQRELAEAE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1060 KETSELKE------AMEQQKGKNND-----------LREKNWKAMEALALA---------ERACEEKLRSLTQAKEESEK 1113
Cdd:TIGR02169 497 AQARASEErvrggrAVEEVLKASIQgvhgtvaqlgsVGERYATAIEVAAGNrlnnvvvedDAVAKEAIELLKRRKAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1114 QLHLAEAQTKETLL-ALLPGLSISAHQNYAEWLQEFK----------------EKGSELLKK-------PPTLEPSMDIV 1169
Cdd:TIGR02169 577 FLPLNKMRDERRDLsILSEDGVIGFAVDLVEFDPKYEpafkyvfgdtlvvediEAARRLMGKyrmvtleGELFEKSGAMT 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1170 ---LKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERV---WKAKVGAAEEELHKSRVTVKHLEDIVEKLK 1243
Cdd:TIGR02169 657 ggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRldeLSQELSDASRKIGEIEKEIEQLEQEEEKLK 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1244 GELESS-------DQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLleSQSQLDEAKSEAQKQSDELALLKTQL 1316
Cdd:TIGR02169 737 ERLEELeedlsslEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARL 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1317 ERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAgplESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELL 1396
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKE---IENLNGKKEELEEELEELEAALRDLESRLGDLKKER 891
|
730 740
....*....|....*....|....*.
gi 568918950 1397 KTTQEQLTKEKDTVKKLQEQLGKAED 1422
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRK 917
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
290-556 |
3.82e-10 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 64.63 E-value: 3.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 290 KGEGAQNQAKkGEGAQNQAKKGEGAQnqGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQA-KKGEGAQNQAKKGEGAQNQA 368
Cdd:TIGR00927 632 KGDVAEAEHT-GERTGEEGERPTEAE--GENGEESGGEAEQEGETETKGENESEGEIPAeRKGEQEGEGEIEAKEADHKG 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 369 KKGEG-VQNQAKKGVEGAQNQGKkgeaNQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGtsn 447
Cdd:TIGR00927 709 ETEAEeVEHEGETEAEGTEDEGE----IETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG--- 781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 448 QGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG--KKGEGAQNQGKKGEGP 525
Cdd:TIGR00927 782 EIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGeaKQDEKGVDGGGGSDGG 861
|
250 260 270
....*....|....*....|....*....|.
gi 568918950 526 QNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQ 556
Cdd:TIGR00927 862 DSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
814-1376 |
4.34e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.68 E-value: 4.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 814 EQEIAAVQARMQA-----SYRDHVKEVQQLQGKIRTLQEQLengpntqlARLQQENSILRDALNQATSQVEskqntelak 888
Cdd:PRK02224 227 EQREQARETRDEAdevleEHEERREELETLEAEIEDLRETI--------AETEREREELAEEVRDLRERLE--------- 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 889 lrqELSKVNKELVEKSEAsrqEEQQRKALEAKAATFEKQvlqlqashkesEEALQKRLEEVTRELCRAQTSHANLRADA- 967
Cdd:PRK02224 290 ---ELEEERDDLLAEAGL---DDADAEAVEARREELEDR-----------DEELRDRLEECRVAAQAHNEEAESLREDAd 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 968 ---EKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEagqaqDTQASHAEANQq 1044
Cdd:PRK02224 353 dleERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE-----ELREERDELRE- 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1045 qtRLKELEsqvscleketSELKEAmeqqkgkNNDLREKnwkamEALaLAERACEEklrsLTQAKEESEKQLHLAEA-QTK 1123
Cdd:PRK02224 427 --REAELE----------ATLRTA-------RERVEEA-----EAL-LEAGKCPE----CGQPVEGSPHVETIEEDrERV 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1124 ETLlallpglsisahqnyAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDL 1203
Cdd:PRK02224 478 EEL---------------EAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEEL 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1204 QKSVEE---EERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEaelekhmaaasaecqNYAKE 1280
Cdd:PRK02224 543 RERAAEleaEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIA---------------DAEDE 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1281 VAGLRqlllESQSQLDEAKSEAQKQSDELALLKTQLERT--EATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAA- 1357
Cdd:PRK02224 608 IERLR----EKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEi 683
|
570
....*....|....*....
gi 568918950 1358 GPLESSgKEEITQLKERLE 1376
Cdd:PRK02224 684 GAVENE-LEELEELRERRE 701
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
760-1356 |
1.24e-09 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 63.32 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 760 LKRQLEEKEKLLATEQEDAAVA----KSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEV 835
Cdd:pfam12128 263 LHFGYKSDETLIASRQEERQETsaelNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETA 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 836 QQLQGKIRTLQEQLENGPNTQLARLQQENSILRdALNQATSQVESKQNTELAKLRQELSKVnkelveKSEASRQEEQQRK 915
Cdd:pfam12128 343 AADQEQLPSWQSELENLEERLKALTGKHQDVTA-KYNRRRSKIKEQNNRDIAGIKDKLAKI------REARDRQLAVAED 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 916 ALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQ------TSHANLRADAEKAQEQQQRVAELHSKLQSSEV 989
Cdd:pfam12128 416 DLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATatpellLQLENFDERIERAREEQEAANAEVERLQSELR 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 990 EVKSKCEELSSLHGQlkearaENSQLTERIRSIEALLEAGQAQDTQASHAEANQ----QQTRLKELESQVSCLEKETSEL 1065
Cdd:pfam12128 496 QARKRRDQASEALRQ------ASRRLEERQSALDELELQLFPQAGTLLHFLRKEapdwEQSIGKVISPELLHRTDLDPEV 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1066 KEAMEQQK----GKNNDLRE---KNWKAMEALALAERA-CEEKLRSLTQAKEESEKQLHLAEAQTKETLLALlpGLSISA 1137
Cdd:pfam12128 570 WDGSVGGElnlyGVKLDLKRidvPEWAASEEELRERLDkAEEALQSAREKQAAAEEQLVQANGELEKASREE--TFARTA 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1138 HQNYAEWLQE-FKEKGSELLKKPPTLEPSMDIVLKLREAEETQ-----NSLQAECDQYRTILAETEGMLKDLQKSVEEEE 1211
Cdd:pfam12128 648 LKNARLDLRRlFDEKQSEKDKKNKALAERKDSANERLNSLEAQlkqldKKHQAWLEEQKEQKREARTEKQAYWQVVEGAL 727
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1212 rvwKAKVGAAEEELHKSRVTVK-HLEDIVEKLKGELESSDQVREHTSHLEAELEKhMAAASAECQNYAKEVAGLRQLLLE 1290
Cdd:pfam12128 728 ---DAQLALLKAAIAARRSGAKaELKALETWYKRDLASLGVDPDVIAKLKREIRT-LERKIERIAVRRQEVLRYFDWYQE 803
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 1291 S-QSQLDEAKSEAQKQSDELALLKTQLERTEATLEaeqTRRQKLTAEFEEAQRTACRIQEELEKLRA 1356
Cdd:pfam12128 804 TwLQRRPRLATQLSNIERAISELQQQLARLIADTK---LRRAKLEMERKASEKQQVRLSENLRGLRC 867
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
970-1344 |
1.50e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 1.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 970 AQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAqdtqashaEANQQQTRLK 1049
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQ--------EEEKLKERLE 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1050 ELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALA-LAERACEEKLRSLTQAKEESEKQLHLAEAQTKEtlla 1128
Cdd:TIGR02169 741 ELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNdLEARLSHSRIPEIQAELSKLEEEVSRIEARLRE---- 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1129 llpglsISAHQNYAEWLQEFKEKGSELLKkpptlEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKS-- 1206
Cdd:TIGR02169 817 ------IEQKLNRLTLEKEYLEKEIQELQ-----EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRlg 885
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1207 -VEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELES-SDQVREHTSHLEAELEKHMAAASAEcqnyakEVAGL 1284
Cdd:TIGR02169 886 dLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEAlEEELSEIEDPKGEDEEIPEEELSLE------DVQAE 959
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1285 RQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTA 1344
Cdd:TIGR02169 960 LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
968-1422 |
2.51e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 61.98 E-value: 2.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 968 EKAQEQQQRVAELHSKLQSSEVEVKSKCEELSS--LHGQLKEARAENSQLTERIRSIEALLEA-----GQAQDTQASHAE 1040
Cdd:PRK02224 169 ERASDARLGVERVLSDQRGSLDQLKAQIEEKEEkdLHERLNGLESELAELDEEIERYEEQREQaretrDEADEVLEEHEE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1041 ANQQQTRLK----ELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEeklrSLTQAKEESEKQlh 1116
Cdd:PRK02224 249 RREELETLEaeieDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAE----AVEARREELEDR-- 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1117 laEAQTKETLLALlpGLSISAHQNYAEWLQEfkekgsellkKPPTLEPSMDivlklrEAEETQNSLQAECDQYRTILAET 1196
Cdd:PRK02224 323 --DEELRDRLEEC--RVAAQAHNEEAESLRE----------DADDLEERAE------ELREEAAELESELEEAREAVEDR 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1197 EGMLKDLQKSVEEEErvwkAKVGAAEEELHKsrvtvkhLEDIVEKLkgeLESSDQVREHTSHLEAELekhmaaasaecQN 1276
Cdd:PRK02224 383 REEIEELEEEIEELR----ERFGDAPVDLGN-------AEDFLEEL---REERDELREREAELEATL-----------RT 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1277 YAKEVAGLRQLLLESQ----------SQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRrqkltaeFEEAQRTACR 1346
Cdd:PRK02224 438 ARERVEEAEALLEAGKcpecgqpvegSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLER-------AEDLVEAEDR 510
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568918950 1347 IQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAED 1422
Cdd:PRK02224 511 IERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKE 586
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
171-423 |
2.61e-09 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 61.94 E-value: 2.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 171 EATPKEV--PMVAVPPVGSKASSPATSSQGKKGQGAQNQAKKGEGAQNQGKKGEG---AQNQAKKGEGAQNQAKKGEGAQ 245
Cdd:TIGR00927 643 ERTGEEGerPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGeieAKEADHKGETEAEEVEHEGETE 722
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 246 NQGKKGEG-AQNQAKKGEGGQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQAKKGEGaqnQAKKGEGAQNQGKKGEGA 324
Cdd:TIGR00927 723 AEGTEDEGeIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG---EIQAGEDGEMKGDEGAEG 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 325 QNQSKKGEGAQNQAKKGEGGQNQAKKGEGaqnqaKKGEGAQNQAKKGEGVQNQAKKGVEGaQNQGKKGEANQNQAKKGEG 404
Cdd:TIGR00927 800 KVEHEGETEAGEKDEHEGQSETQADDTEV-----KDETGEQELNAENQGEAKQDEKGVDG-GGGSDGGDSEEEEEEEEEE 873
|
250
....*....|....*....
gi 568918950 405 GQNQTKKGEGPQNQGKKGE 423
Cdd:TIGR00927 874 EEEEEEEEEEEEEEEENEE 892
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1048-1403 |
2.75e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 2.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1048 LKELESQVSCLEKETSELKEAMEQQKgknndlREKNWKAmEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKEtll 1127
Cdd:COG1196 195 LGELERQLEPLERQAEKAERYRELKE------ELKELEA-ELLLLKLRELEAELEELEAELEELEAELEELEAELAE--- 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1128 allpglsisahqnyaewlqefKEKGSELLKkpptlepsmdivLKLREAEETQNSLQAEcdqYRTILAETEGMLKDLQKSV 1207
Cdd:COG1196 265 ---------------------LEAELEELR------------LELEELELELEEAQAE---EYELLAELARLEQDIARLE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1208 EEEERVwKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQL 1287
Cdd:COG1196 309 ERRREL-EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1288 LLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAgplESSGKEE 1367
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE---EEALLEL 464
|
330 340 350
....*....|....*....|....*....|....*.
gi 568918950 1368 ITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQL 1403
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
209-623 |
3.62e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 3.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 209 KKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAKKGEgaqnQGKKGEGAQNQG 288
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE----EAKKADEAKKKA 1453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 289 KKGEGAQNQAKKGEgaqnQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEgaqnQAKKGEGAQ--N 366
Cdd:PTZ00121 1454 EEAKKAEEAKKKAE----EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD----EAKKAEEAKkaD 1525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 367 QAKKGEgvqnQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQD--KKIEGAQNQGKKPEG 444
Cdd:PTZ00121 1526 EAKKAE----EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEeaKKAEEARIEEVMKLY 1601
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 445 TSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEgAQNQGKKGEG 524
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA-EEDKKKAEEA 1680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 525 PQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGKKGDgnPNQGKKGEGASNQNRKTDT 604
Cdd:PTZ00121 1681 KKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA--EEDKKKAEEAKKDEEEKKK 1758
|
410
....*....|....*....
gi 568918950 605 VANQGTKQEGVSNQVKKSE 623
Cdd:PTZ00121 1759 IAHLKKEEEKKAEEIRKEK 1777
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
885-1355 |
4.59e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 4.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 885 ELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEE--ALQKRLEEVTRELCRAQTSHAN 962
Cdd:PRK03918 239 EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSR 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 963 LRADAEKAQEQQQRVAELHSK---LQSSEVEVKSKCEELSSLHGQLKEARAENSQLtERIRSIEALLEAGQAQDTQASHA 1039
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERleeLKKKLKELEKRLEELEERHELYEEAKAKKEEL-ERLKKRLTGLTPEKLEKELEELE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1040 EANQQQTR-LKELESQVSCLEKETSELKEAMEQQKGKNN---------------DLREKNWKAMEALALAERACEEKLRS 1103
Cdd:PRK03918 398 KAKEEIEEeISKITARIGELKKEIKELKKAIEELKKAKGkcpvcgrelteehrkELLEEYTAELKRIEKELKEIEEKERK 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1104 LTQAKEESEKQLHLAEAQTK-ETLLALLPGLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLK-LREAEETQNS 1181
Cdd:PRK03918 478 LRKELRELEKVLKKESELIKlKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKeLEKLEELKKK 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1182 LQAECDQYRTILAETEGMLKDLQ----KSVEEEERVWKaKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTS 1257
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEelgfESVEELEERLK-ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELA 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1258 HLEAELEKHMAAASAECQNYAKE-VAGLRQLLLESQSQLdeakSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAE 1336
Cdd:PRK03918 637 ETEKRLEELRKELEELEKKYSEEeYEELREEYLELSREL----AGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKE 712
|
490
....*....|....*....
gi 568918950 1337 FEEAQRTACRIQEELEKLR 1355
Cdd:PRK03918 713 LEKLEKALERVEELREKVK 731
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
749-1341 |
5.38e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 5.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 749 KATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASY 828
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEE 1402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 829 R----DHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQEnsilrdalnQATSQVESKQNTELAKLRQELSKVNKELVEKS 904
Cdd:PTZ00121 1403 DkkkaDELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE---------EAKKADEAKKKAEEAKKAEEAKKKAEEAKKAD 1473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 905 EASRQEEQQRKALEA--KAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHS 982
Cdd:PTZ00121 1474 EAKKKAEEAKKADEAkkKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKK 1553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 983 KLQSSEVEVKSKCEELSSLHGQLKEA--RAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEK 1060
Cdd:PTZ00121 1554 AEELKKAEEKKKAEEAKKAEEDKNMAlrKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK 1633
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1061 ETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKEtllallpglsisahQN 1140
Cdd:PTZ00121 1634 KVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE--------------AE 1699
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1141 YAEWLQEFKEKGSELLKKPPTLEPSMDI-VLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVG 1219
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEEnKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1220 AAEEELHKsrvtvkhledivEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAK 1299
Cdd:PTZ00121 1780 VIEEELDE------------EDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEAD 1847
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 568918950 1300 sEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQ 1341
Cdd:PTZ00121 1848 -AFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEAD 1888
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
761-1027 |
1.78e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 761 KRQLEEKEKLLATEQEDAAVAKSKLRELNKEMAsekakaaageakvkkQLVAREQEIAAVQArmqasYRDHVKEVQQLQG 840
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELD---------------ALQERREALQRLAE-----YSWDEIDVASAER 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 841 KIRTLQEQLEN--GPNTQLARLQQENSILRDALNQATSQVESKQ------NTELAKLRQELSKVNKELVEKSEASRQEEQ 912
Cdd:COG4913 669 EIAELEAELERldASSDDLAALEEQLEELEAELEELEEELDELKgeigrlEKELEQAEEELDELQDRLEAAEDLARLELR 748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 913 QRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSH--------ANLRADAEKAQEqqqrVAELHSKL 984
Cdd:COG4913 749 ALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFnrewpaetADLDADLESLPE----YLALLDRL 824
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 568918950 985 QSSEV--------EVKSKC--EELSSLHGQLKEARAEnsqLTERIRSIEALLE 1027
Cdd:COG4913 825 EEDGLpeyeerfkELLNENsiEFVADLLSKLRRAIRE---IKERIDPLNDSLK 874
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
227-684 |
2.53e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.00 E-value: 2.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 227 QAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAKKGEGAQN--QGKKGEGAQNQGKKGEGAQNQAKKGEGA 304
Cdd:PTZ00121 1201 KAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNneEIRKFEEARMAHFARRQAAIKAEEARKA 1280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 305 QNQAKKGEGAQ-NQGKKGEgaqnQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQA----KKGEGAQNQAKKGEGVQNQAK 379
Cdd:PTZ00121 1281 DELKKAEEKKKaDEAKKAE----EKKKADEAKKKAEEAKKADEAKKKAEEAKKKAdaakKKAEEAKKAAEAAKAEAEAAA 1356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 380 KGVEGAQNQGKKGEANQNQAKK-GEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQ 458
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKkADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 459 GKKGEgaqnQGKKGEGAQNQGKKGEGAQNQGKKGEgaqnQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQ 538
Cdd:PTZ00121 1437 KKKAE----EAKKADEAKKKAEEAKKAEEAKKKAE----EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 539 GKKGEGAQ--------NQGKKGEGAQ--NQGKKAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGEGASNQNRKTDTVANQ 608
Cdd:PTZ00121 1509 KKKADEAKkaeeakkaDEAKKAEEAKkaDEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK 1588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 609 GTK---QEGVSNQVKKSEGSPNQGKKAEGAPNQGKKKDGSPSQAKKVD----AAANQGKKSEMAPAQGQKASMVQSQEAP 681
Cdd:PTZ00121 1589 AEEariEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEqlkkKEAEEKKKAEELKKAEEENKIKAAEEAK 1668
|
...
gi 568918950 682 KQD 684
Cdd:PTZ00121 1669 KAE 1671
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
809-1104 |
2.75e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.93 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 809 QLVAREQEIAAVQARMQASYRDHVKEVQQLQGKIRTLQEQLENGPNtQLARLQQENSILRDALNQATSQVESKQNtELAK 888
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK-EIEQLEQEEEKLKERLEELEEDLSSLEQ-EIEN 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 889 LRQELSKVNKELVEKSEASRQEEQQRKALEAKAAtfEKQVLQLQAsHKESEEALQKRLEEVTRELCRAQTSHANLRADAE 968
Cdd:TIGR02169 756 VKSELKELEARIEELEEDLHKLEEALNDLEARLS--HSRIPEIQA-ELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 969 KA-QEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQdtqashaeANQQQTR 1047
Cdd:TIGR02169 833 KEiQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ--------LRELERK 904
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 1048 LKELESQVSCLEKETSELKEAMEQQKGKNNDLrEKNWKAM----------EALALAERACEEKLRSL 1104
Cdd:TIGR02169 905 IEELEAQIEKKRKRLSELKAKLEALEEELSEI-EDPKGEDeeipeeelslEDVQAELQRVEEEIRAL 970
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
421-644 |
3.38e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 58.47 E-value: 3.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 421 KGEAAQKQDKKiEGAQNQGKKPEGTsnQGKKGEGAQNQGKKGEGAQNQGK-KGEGAQNQGKKGEGAQNQGKKGEGAQNqg 499
Cdd:TIGR00927 632 KGDVAEAEHTG-ERTGEEGERPTEA--EGENGEESGGEAEQEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADH-- 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 500 kKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQGK-KGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQ 578
Cdd:TIGR00927 707 -KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQA 785
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568918950 579 GKKGDGNPNQGKKGEGASNQNRKTDTVANQGTKQEgvsNQVKKSEGSPNQGKKAEGAPNQGKKKDG 644
Cdd:TIGR00927 786 GEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSE---TQADDTEVKDETGEQELNAENQGEAKQD 848
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
809-1024 |
4.06e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 58.10 E-value: 4.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 809 QLVAREQEIAAVQARMQAsYR------DHVKEVQQLQGKIRTLQEQLENgPNTQLARLQQENSILRDALNQATSQV-ESK 881
Cdd:COG3206 183 QLPELRKELEEAEAALEE-FRqknglvDLSEEAKLLLQQLSELESQLAE-ARAELAEAEARLAALRAQLGSGPDALpELL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 882 QNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVlqlqashkesEEALQKRLEEVTRELCRAQTSHA 961
Cdd:COG3206 261 QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQL----------QQEAQRILASLEAELEALQAREA 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568918950 962 NLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEA 1024
Cdd:COG3206 331 SLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVRVIDP 393
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
757-1432 |
5.52e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 57.67 E-value: 5.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQ 836
Cdd:pfam02463 164 GSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 QLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKA 916
Cdd:pfam02463 244 ELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEK 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 917 LEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRAD-----AEKAQEQQQRVAELHSKLQSSEVEV 991
Cdd:pfam02463 324 KKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEellakKKLESERLSSAAKLKEEELELKSEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 992 KSKCEELSSLHGQLKE-ARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESqvscLEKETSELKEAME 1070
Cdd:pfam02463 404 EKEAQLLLELARQLEDlLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELE----LKKSEDLLKETQL 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1071 QQKGKNNDLREKNWKAMEALAlAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSIsAHQNYAEWLQEFKE 1150
Cdd:pfam02463 480 VKLQEQLELLLSRQKLEERSQ-KESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKV-AISTAVIVEVSATA 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1151 KGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRV 1230
Cdd:pfam02463 558 DEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKL 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1231 TVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAglrqLLLESQSQLDEAKSEAQKQSDELA 1310
Cdd:pfam02463 638 KESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESEL----AKEEILRRQLEIKKKEQREKEELK 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1311 LLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACrIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLgrAAI 1390
Cdd:pfam02463 714 KLKLEAEELLADRVQEAQDKINEELKLLKQKIDEE-EEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLK--VEE 790
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 568918950 1391 KLQELLKTTQEQLTKEKDTVKKLQEQLGKAEDGSSSKEGTSV 1432
Cdd:pfam02463 791 EKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKE 832
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1169-1417 |
5.66e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.76 E-value: 5.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1169 VLKLRE-AEETQNSL---QAECDQYRTILAETEGMLKDLQKSVEEEER--------------VWKAKVGAAEEELHKSRV 1230
Cdd:TIGR02168 167 ISKYKErRKETERKLertRENLDRLEDILNELERQLKSLERQAEKAERykelkaelrelelaLLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1231 TVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGL--------------RQLLLESQSQLD 1296
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLeqqkqilrerlanlERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1297 EAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLE-----------SSGK 1365
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLelqiaslnneiERLE 406
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1366 EEITQLKERLEKEKRLTSDLGRAAIKLQelLKTTQEQLTKEKDTVKKLQEQL 1417
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKKLEEAE--LKELQAELEELEEELEELQEEL 456
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
833-1069 |
6.54e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 6.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 833 KEVQQLQGKIRTLQEQLENgPNTQLARLQQENSILRDALNQATSQVeSKQNTELAKLRQELSKVNKELvekSEASRQEEQ 912
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAE-LEKELAALKKEEKALLKQLAALERRI-AALARRIRALEQELAALEAEL---AELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 913 QRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVK 992
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 993 skceELSSLHGQLKEARAENSQLTERIRSIEALLEagqaQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAM 1069
Cdd:COG4942 175 ----ELEALLAELEEERAALEALKAERQKLLARLE----KELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
833-1419 |
8.41e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 57.29 E-value: 8.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 833 KEVQQLQGKIRTLQEQLENGPNTQlARLQQENSILRDALNQAtsqveskqntELAKLRQELSKVNKELVEKSEASRQEEQ 912
Cdd:TIGR00618 260 QLLKQLRARIEELRAQEAVLEETQ-ERINRARKAAPLAAHIK----------AVTQIEQQAQRIHTELQSKMRSRAKLLM 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 913 QRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTR--ELCRAQTSHANLRA---DAEKAQEQQQRVAELHSKLQSS 987
Cdd:TIGR00618 329 KRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIreISCQQHTLTQHIHTlqqQKTTLTQKLQSLCKELDILQRE 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 988 EVEVKSKCEELSSLHGQLKEARAEnSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKE 1067
Cdd:TIGR00618 409 QATIDTRTSAFRDLQGQLAHAKKQ-QELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETR 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1068 AMEQQKGKNNDLREKNWKAMEAL-----ALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLsisahQNYA 1142
Cdd:TIGR00618 488 KKAVVLARLLELQEEPCPLCGSCihpnpARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQR-----ASLK 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1143 EWLQEFKEKGSELLKKPPTLEPSMDIVLKlrEAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVGAAE 1222
Cdd:TIGR00618 563 EQMQEIQQSFSILTQCDNRSKEDIPNLQN--ITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQE 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1223 EELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEA 1302
Cdd:TIGR00618 641 LALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREF 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1303 QKQSDELALLKTQLERTEATL-----EAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEK 1377
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALnqslkELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHL 800
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 568918950 1378 EKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGK 1419
Cdd:TIGR00618 801 LKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSA 842
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
893-1421 |
1.25e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.61 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 893 LSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKEseeaLQKRLEEVTRELcraqtshANLRADAEKAQE 972
Cdd:PRK03918 167 LGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINE----ISSELPELREEL-------EKLEKEVKELEE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 973 QQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEAL---------LEAGQAQDTQASH----- 1038
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELkekaeeyikLSEFYEEYLDELReiekr 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1039 -----AEANQQQTRLKELESqvscLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEK 1113
Cdd:PRK03918 316 lsrleEEINGIEERIKELEE----KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1114 QLHLAEAQTKETLLALlpgLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTIL 1193
Cdd:PRK03918 392 ELEELEKAKEEIEEEI---SKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKEL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1194 AETEGMLKDLQKSVEEEErvwkaKVGAAEEELHKSRVTVKHLEDIVEKLKG----ELESS----DQVREHTSHLEAE--- 1262
Cdd:PRK03918 469 KEIEEKERKLRKELRELE-----KVLKKESELIKLKELAEQLKELEEKLKKynleELEKKaeeyEKLKEKLIKLKGEiks 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1263 ----------LEKHMAAASAECQNYAKEVAGL----RQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQT 1328
Cdd:PRK03918 544 lkkelekleeLKKKLAELEKKLDELEEELAELlkelEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKK 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1329 RRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGK-EEITQLKERLEKE-KRLTSDLGRAAIKLQELLKTTqEQLTKE 1406
Cdd:PRK03918 624 LEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSRElAGLRAELEELEKRREEIKKTL-EKLKEE 702
|
570
....*....|....*
gi 568918950 1407 KDTVKKLQEQLGKAE 1421
Cdd:PRK03918 703 LEEREKAKKELEKLE 717
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1192-1421 |
1.26e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1192 ILAETEGMLKDLQKSVEEEERvwkAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESsdqvrehtshlEAELEKHMAAAS 1271
Cdd:COG1196 194 ILGELERQLEPLERQAEKAER---YRELKEELKELEAELLLLKLRELEAELEELEAE-----------LEELEAELEELE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1272 AECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEEL 1351
Cdd:COG1196 260 AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1352 EKLRAAgpLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAE 1421
Cdd:COG1196 340 EELEEE--LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
401-643 |
1.81e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.16 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 401 KGEGGQNQTKkGEGPQNQGKKGEAAQKQDKKIEGAQNQgkKPEGTSNQGK-KGEGAQNQGKKGEGAQNQGKKGEGAQNqg 479
Cdd:TIGR00927 632 KGDVAEAEHT-GERTGEEGERPTEAEGENGEESGGEAE--QEGETETKGEnESEGEIPAERKGEQEGEGEIEAKEADH-- 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 480 kKGEGAQNQGKKGEGAQNQGKKGEGaqnQGKKGEGAQNQGKKGEGpQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 559
Cdd:TIGR00927 707 -KGETEAEEVEHEGETEAEGTEDEG---EIETGEEGEEVEDEGEG-EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG 781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 560 KKAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGEGASNQNRKTDTVANQGTKQEGVSNQVKKSEGSPNQGKKAEGAPNQG 639
Cdd:TIGR00927 782 EIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGG 861
|
....
gi 568918950 640 KKKD 643
Cdd:TIGR00927 862 DSEE 865
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
383-592 |
2.60e-07 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 55.30 E-value: 2.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 383 EGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQ-NQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKK 461
Cdd:PRK12678 56 KEARGGGAAAAAATPAAPAAAARRAARAAAAARQaEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 462 GEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKGEGAQNQGKK 541
Cdd:PRK12678 136 AARRGAARKAGEGGEQPATEARADAAERTEEEERDERRRRGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRR 215
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568918950 542 GEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGkkgDGNPNQGKKG 592
Cdd:PRK12678 216 EERGRRDGGDRRGRRRRRDRRDARGDDNREDRGDRDGD---DGEGRGGRRG 263
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
818-1104 |
3.03e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 55.30 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 818 AAVQARMQAsyrdhVKEVQQLQGKIRTLQEQLENGPNT--QLARLQQENSILRDALNQATSQVESKQnTELAKL------ 889
Cdd:PRK11281 39 ADVQAQLDA-----LNKQKLLEAEDKLVQQDLEQTLALldKIDRQKEETEQLKQQLAQAPAKLRQAQ-AELEALkddnde 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 890 --RQELSKVNKELVEKSEASRQEEQQRkaLEAKAATFEKQVLQLQASHKESEEAL---QKRLEEVTRELCRAQTSHANLR 964
Cdd:PRK11281 113 etRETLSTLSLRQLESRLAQTLDQLQN--AQNDLAEYNSQLVSLQTQPERAQAALyanSQRLQQIRNLLKGGKVGGKALR 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 965 ADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELssLHGQLKEARAENSQLTERIRSIEAL-----LEAGQAQDTQASHA 1039
Cdd:PRK11281 191 PSQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDL--LQKQRDYLTARIQRLEHQLQLLQEAinskrLTLSEKTVQEAQSQ 268
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1040 EANQQQTR----LKELES--QVS-CLEKETSELKEAMEQqkgknnDLREKNWkaMEALALAERACEEKLRSL 1104
Cdd:PRK11281 269 DEAARIQAnplvAQELEInlQLSqRLLKATEKLNTLTQQ------NLRVKNW--LDRLTQSERNIKEQISVL 332
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
863-1377 |
3.91e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.96 E-value: 3.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 863 ENSILRDALNQATSQV-ESKQNTELAKLRQELSKVNKELVEKSEA------SRQEEQQRKALEaKAATFEKQVlqlqASH 935
Cdd:PRK04863 224 ENSGVRKAFQDMEAALrENRMTLEAIRVTQSDRDLFKHLITESTNyvaadyMRHANERRVHLE-EALELRREL----YTS 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 936 KESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRV--AELHSKlqssevevkskceelsslhgQLKEARAENS 1013
Cdd:PRK04863 299 RRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVqtALRQQE--------------------KIERYQADLE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1014 QLTERirsieaLLEAGQAQDTQASHAEANQQQTRLKELEsqVSCLEKETSELKEAMEQQKGKNNDLREknwkAMEALALA 1093
Cdd:PRK04863 359 ELEER------LEEQNEVVEEADEQQEENEARAEAAEEE--VDELKSQLADYQQALDVQQTRAIQYQQ----AVQALERA 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1094 ERACEekLRSLTQAK-EESEKQLHLAEAQTKETLLALLPGLSIS--AHQNYAEWLQEFKEKGSELlkkpptlepsmdivl 1170
Cdd:PRK04863 427 KQLCG--LPDLTADNaEDWLEEFQAKEQEATEELLSLEQKLSVAqaAHSQFEQAYQLVRKIAGEV--------------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1171 klrEAEETQNSLQAECDQYRTilaetegmlkdlQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSD 1250
Cdd:PRK04863 490 ---SRSEAWDVARELLRRLRE------------QRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDED 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1251 QVREHTSHLEAELEKhmaaasaecqnyakevaglrqlLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRR 1330
Cdd:PRK04863 555 ELEQLQEELEARLES----------------------LSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAL 612
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 568918950 1331 QKLTAEFEEAQRTACR----IQEELEKLRAAGPLESSGKEEITQLKERLEK 1377
Cdd:PRK04863 613 ARLREQSGEEFEDSQDvteyMQQLLERERELTVERDELAARKQALDEEIER 663
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
763-916 |
4.22e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 54.64 E-value: 4.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 763 QLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQ-LVAREQEIAAVQARMQASYRDHVKEVQQLQGK 841
Cdd:COG3206 220 QLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQqLRAQLAELEAELAELSARYTPNHPDVIALRAQ 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 842 IRTLQEQLENGPNTQLARLQQENSILR---DALNQATSQVESKQNT------ELAKLRQELsKVNKE----LVEKSEASR 908
Cdd:COG3206 300 IAALRAQLQQEAQRILASLEAELEALQareASLQAQLAQLEARLAElpeleaELRRLEREV-EVARElyesLLQRLEEAR 378
|
....*...
gi 568918950 909 QEEQQRKA 916
Cdd:COG3206 379 LAEALTVG 386
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
757-1332 |
4.49e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 54.59 E-value: 4.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQ 836
Cdd:TIGR00618 296 AAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQH 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 QLQGKIRTLQEQLE-----------------NGPNTQLARLQQENSILRDALNQATSQVESKQNTEL-----AKLRQELS 894
Cdd:TIGR00618 376 TLTQHIHTLQQQKTtltqklqslckeldilqREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELcaaaiTCTAQCEK 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 895 KVNKELVEKSEASRQEEQQRKALEAKAATfEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQ 974
Cdd:TIGR00618 456 LEKIHLQESAQSLKEREQQLQTKEQIHLQ-ETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGE 534
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 975 QRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASH---AEANQQQTRLKEL 1051
Cdd:TIGR00618 535 QTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDlteKLSEAEDMLACEQ 614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1052 ESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLP 1131
Cdd:TIGR00618 615 HALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTY 694
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1132 GLSISAHQNYAEWLQEFKEKGSEllkkpptlepsmdivlklREAEETQNSLQAEcdqyRTILAETEGMLKDLQKSVEEEE 1211
Cdd:TIGR00618 695 WKEMLAQCQTLLRELETHIEEYD------------------REFNEIENASSSL----GSDLAAREDALNQSLKELMHQA 752
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1212 RvWKAKVGAAEEELHKSRVTVK-HLEDIVEKLKGELESSDQVREHTSHLEAELEkhmaaasAECQNYAKEVAGLRQLLLE 1290
Cdd:TIGR00618 753 R-TVLKARTEAHFNNNEEVTAAlQTGAELSHLAAEIQFFNRLREEDTHLLKTLE-------AEIGQEIPSDEDILNLQCE 824
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 568918950 1291 SQSQ-LDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQK 1332
Cdd:TIGR00618 825 TLVQeEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQE 867
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
906-1395 |
5.18e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.57 E-value: 5.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 906 ASRQEEQQRKALEAKAATFEKQVLQLQAshkeseealQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVaelhsklq 985
Cdd:COG3096 277 ANERRELSERALELRRELFGARRQLAEE---------QYRLVEMARELEELSARESDLEQDYQAASDHLNLV-------- 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 986 ssevevkskceeLSSLHGQLKEAR--AENSQLTERIRSIEALLEAGQAQdtqasHAEAnqqQTRLKELESQVSCLEKETS 1063
Cdd:COG3096 340 ------------QTALRQQEKIERyqEDLEELTERLEEQEEVVEEAAEQ-----LAEA---EARLEAAEEEVDSLKSQLA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1064 ELKEAMEQQKGKNNDLREknwkAMEALALAERACEEKLRSLTQAKEESEkQLHLAEAQTKETLLALLPGLSIS--AHQNY 1141
Cdd:COG3096 400 DYQQALDVQQTRAIQYQQ----AVQALEKARALCGLPDLTPENAEDYLA-AFRAKEQQATEEVLELEQKLSVAdaARRQF 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1142 aewlqefkEKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAEtegmLKDLQKSVEEEERVwkakvgaa 1221
Cdd:COG3096 475 --------EKAYELVCKIAGEVERSQAWQTARELLRRYRSQQALAQRLQQLRAQ----LAELEQRLRQQQNA-------- 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1222 eEELhksrvtvkhLEDIVEKLKGELESSDQVREHTSHLEAELEKhmaaasaecqnyakevaglrqlLLESQSQLDEAKSE 1301
Cdd:COG3096 535 -ERL---------LEEFCQRIGQQLDAAEELEELLAELEAQLEE----------------------LEEQAAEAVEQRSE 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1302 AQKQSDELALLKTQLERTEATLEAEQTRRQKLT----AEFEEAQRTACRIQEELEKLRAAgpleSSGKEEITQLKERLEK 1377
Cdd:COG3096 583 LRQQLEQLRARIKELAARAPAWLAAQDALERLReqsgEALADSQEVTAAMQQLLEREREA----TVERDELAARKQALES 658
|
490
....*....|....*....
gi 568918950 1378 E-KRLTSDLGRAAIKLQEL 1395
Cdd:COG3096 659 QiERLSQPGGAEDPRLLAL 677
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
760-1124 |
7.06e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 7.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 760 LKRQLEEKEKLLATEQEDAAVAKSKLRELnkEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQAsYRDHVKEVQQLQ 839
Cdd:COG4717 93 LQEELEELEEELEELEAELEELREELEKL--EKLLQLLPLYQELEALEAELAELPERLEELEERLEE-LRELEEELEELE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 840 GKIRTLQEQLENGPNT-------QLARLQQENSILRDALNQATSQVESKQNtELAKLRQELSKVNKELVEKSEASR-QEE 911
Cdd:COG4717 170 AELAELQEELEELLEQlslateeELQDLAEELEELQQRLAELEEELEEAQE-ELEELEEELEQLENELEAAALEERlKEA 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 912 QQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQE-------QQQRVAELHSKL 984
Cdd:COG4717 249 RLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAlpaleelEEEELEELLAAL 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 985 QSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIR------SIEALLEAGQAQDTQA------SHAEANQQQTRLKELE 1052
Cdd:COG4717 329 GLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqEIAALLAEAGVEDEEElraaleQAEEYQELKEELEELE 408
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568918950 1053 SQvscLEKETSELKEAMEQQKGKNNDLR-EKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKE 1124
Cdd:COG4717 409 EQ---LEELLGELEELLEALDEEELEEElEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQEL 478
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
885-1124 |
9.19e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.80 E-value: 9.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 885 ELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKqvLQLQASHKEsEEALQKRLEEVTRELCRAQTSHA--- 961
Cdd:COG3096 837 ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNK--LLPQANLLA-DETLADRLEELREELDAAQEAQAfiq 913
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 962 --------------NLRADAEKAQEQQQRVAELHSKLQssevEVKSKCEELSSL-----H-------GQLKEARAENSQL 1015
Cdd:COG3096 914 qhgkalaqleplvaVLQSDPEQFEQLQADYLQAKEQQR----RLKQQIFALSEVvqrrpHfsyedavGLLGENSDLNEKL 989
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1016 TERIRSIE-ALLEAG-QAQDTQASHAEANQQQTRLKelesqvSCLEKETSELKEAMEQQKgknnDLREKNWKAMEALALA 1093
Cdd:COG3096 990 RARLEQAEeARREAReQLRQAQAQYSQYNQVLASLK------SSRDAKQQTLQELEQELE----ELGVQADAEAEERARI 1059
|
250 260 270
....*....|....*....|....*....|..
gi 568918950 1094 ERA-CEEKLRSLTQAKEESEKQLHLAEAQTKE 1124
Cdd:COG3096 1060 RRDeLHEELSQNRSRRSQLEKQLTRCEAEMDS 1091
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
812-1318 |
1.33e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.38 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 812 AREQEIAAVQARMQASYRDHVKEVQQLQGKIRTLQEQLENGpNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQ 891
Cdd:COG4913 267 ARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARL-EAELERLEARLDALREELDELEAQIRGNGGDRLEQLER 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 892 ELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQ 971
Cdd:COG4913 346 EIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 972 ---------------EQQQRVAELHSKLQSSEVEVKSKCEEL--------------SSLHGQ----------LKEARA-- 1010
Cdd:COG4913 426 aeiaslerrksnipaRLLALRDALAEALGLDEAELPFVGELIevrpeeerwrgaieRVLGGFaltllvppehYAAALRwv 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1011 ENSQLTERIRsIEALLEAGQAQDTQASHA---------EANQQQTRLKELESQVSCLEKETSElkEAMEQ---------- 1071
Cdd:COG4913 506 NRLHLRGRLV-YERVRTGLPDPERPRLDPdslagkldfKPHPFRAWLEAELGRRFDYVCVDSP--EELRRhpraitragq 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1072 --------QKGKNNDLREKN---WKAMEALALAER---ACEEKLRSLTQAKEESEKQLHLAEAQtKETLLALLPglSISA 1137
Cdd:COG4913 583 vkgngtrhEKDDRRRIRSRYvlgFDNRAKLAALEAelaELEEELAEAEERLEALEAELDALQER-REALQRLAE--YSWD 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1138 HQNYAEWLQEFKEKGSELLKkpptLEPSMDIVLKLR----EAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERV 1213
Cdd:COG4913 660 EIDVASAEREIAELEAELER----LDASSDDLAALEeqleELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDR 735
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1214 WKAKVGAAEEELHKS---RVTVKHLEDIVEKLKGELESS-DQVREHTSHLEAELEKHMAAAS----AECQNYAKEVAG-- 1283
Cdd:COG4913 736 LEAAEDLARLELRALleeRFAAALGDAVERELRENLEERiDALRARLNRAEEELERAMRAFNrewpAETADLDADLESlp 815
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 568918950 1284 -----LRQL----LLESQSQLDEAKSEAQKQsdELALLKTQLER 1318
Cdd:COG4913 816 eylalLDRLeedgLPEYEERFKELLNENSIE--FVADLLSKLRR 857
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
747-1099 |
1.77e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 747 WHKATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQA 826
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEE 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 827 SYRDHVKEVQQLQGKIRTLQEQLENGPNTQlaRLQQENSILRDA-------LNQATSQVESKQNTELAKLRQELSKVNKE 899
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEE--RLKEARLLLLIAaallallGLGGSLLSLILTIAGVLFLVLGLLALLFL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 900 LVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKR----LEEVTRELCRAQTSHANLRADAEKAQEQQQ 975
Cdd:COG4717 292 LLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEelleLLDRIEELQELLREAEELEEELQLEELEQE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 976 RVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQ----------- 1044
Cdd:COG4717 372 IAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEEleeleeeleel 451
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 1045 QTRLKELESQVSCLEKET--SELKEAMEQQKGKNNDLREKNWKAMEALALAERACEE 1099
Cdd:COG4717 452 REELAELEAELEQLEEDGelAELLQELEELKAELRELAEEWAALKLALELLEEAREE 508
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
347-478 |
2.37e-06 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 52.06 E-value: 2.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 347 QAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVE---GAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQ----NQG 419
Cdd:pfam03276 480 QIRASRGPGPGPSAGEGRGGPANEGRGGPCNAGGGNDcgaNGQNDGGENIQNGGQELRSQGGQNLRSGGGQGQrwgeGRG 559
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568918950 420 KKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGegaqNQGKKGEGAQNQGKKGEGAQNQ 478
Cdd:pfam03276 560 NRENENTENSEQRPREIQAGSGRPGNAGQGVKG----AAGQGGKGAAGRGGRGNGAGDQ 614
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
882-1114 |
2.49e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 882 QNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKEseeaLQKRLEEVTRELCRAQTSHA 961
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA----LEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 962 NLRADAEKAQEQ-QQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQAShAE 1040
Cdd:COG4942 94 ELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE-AE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568918950 1041 ANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLReknwKAMEALALAERACEEKLRSLTQAKEESEKQ 1114
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELA----AELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
838-1423 |
2.84e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 2.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 838 LQGKIRTLQEQLeNGPNTQLARLQQENSILRDALNQATSQV--ESKQNTELAKLRQELSKVNKELVE---KSEASRQE-E 911
Cdd:pfam01576 129 TEAKIKKLEEDI-LLLEDQNSKLSKERKLLEERISEFTSNLaeEEEKAKSLSKLKNKHEAMISDLEErlkKEEKGRQElE 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 912 QQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQS----- 986
Cdd:pfam01576 208 KAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESeraar 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 987 --SEVEVKSKCEELSSLHGQLKEA-RAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESqvsclekeTS 1063
Cdd:pfam01576 288 nkAEKQRRDLGEELEALKTELEDTlDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA--------LE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1064 ELKEAMEQQKgKNNDLREKNWKAMEAlALAERACEekLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQ---- 1139
Cdd:pfam01576 360 ELTEQLEQAK-RNKANLEKAKQALES-ENAELQAE--LRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELaekl 435
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1140 --------NYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREaEETQNSLQAEcDQYRTILAETEGMLKDLQKSVEEEE 1211
Cdd:pfam01576 436 sklqseleSVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQ-EETRQKLNLS-TRLRQLEDERNSLQEQLEEEEEAKR 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1212 RVWK------AKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLR 1285
Cdd:pfam01576 514 NVERqlstlqAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQR 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1286 QL---LLESQSQLDEAKSEAQKQSDELAllkTQLERTEATLEAEQTRRQKLTAEFEEAQRTacriQEELEKLRaagples 1362
Cdd:pfam01576 594 QLvsnLEKKQKKFDQMLAEEKAISARYA---EERDRAEAEAREKETRALSLARALEEALEA----KEELERTN------- 659
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568918950 1363 sgkeeiTQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKAEDG 1423
Cdd:pfam01576 660 ------KQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDA 714
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
887-1122 |
4.61e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 51.45 E-value: 4.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 887 AKLRQELSKVNKelvekseaSRQEEQQRKALEAkaaTFEKQVLQLQ--ASHKESEEALQKRLEEVTRELCRAQTSHANLR 964
Cdd:PRK11281 39 ADVQAQLDALNK--------QKLLEAEDKLVQQ---DLEQTLALLDkiDRQKEETEQLKQQLAQAPAKLRQAQAELEALK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 965 ADAEKAQEQ----------QQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDT 1034
Cdd:PRK11281 108 DDNDEETREtlstlslrqlESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1035 QASHAEANQQQTRLKELESQVSCLEKET---SELKEAMEQQKgknNDLREKNWKAMEALALAERACEEKLRSLTQAK-EE 1110
Cdd:PRK11281 188 ALRPSQRVLLQAEQALLNAQNDLQRKSLegnTQLQDLLQKQR---DYLTARIQRLEHQLQLLQEAINSKRLTLSEKTvQE 264
|
250
....*....|..
gi 568918950 1111 SEKQLHLAEAQT 1122
Cdd:PRK11281 265 AQSQDEAARIQA 276
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
451-663 |
4.73e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 51.53 E-value: 4.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 451 KGEGAQNQgKKGEGAQNQGKKGEGAQnqGKKGEgaqnqgKKGEGAQNQGKKGEGAQNQGK-----------KGEG---AQ 516
Cdd:TIGR00927 632 KGDVAEAE-HTGERTGEEGERPTEAE--GENGE------ESGGEAEQEGETETKGENESEgeipaerkgeqEGEGeieAK 702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 517 NQGKKGEGPQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGK-KAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGEGA 595
Cdd:TIGR00927 703 EADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEgEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGE 782
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568918950 596 SNQNRKTDTVANQGTKQEGVSNQVKKSEGSPNQGKKAEGAPNQGKKKDGSPSQAKkvdAAANQGKKSE 663
Cdd:TIGR00927 783 IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQEL---NAENQGEAKQ 847
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
760-1264 |
6.00e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.99 E-value: 6.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 760 LKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQE----IAAVQARMQASYRDHVKEV 835
Cdd:pfam12128 331 HGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQnnrdIAGIKDKLAKIREARDRQL 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 836 QQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRK 915
Cdd:pfam12128 411 AVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERL 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 916 ALEAKAA--TFEKQVLQLQASHKESEEaLQKRLEEVTRELC-RAQTSHANLRADAEKAQEQQQRV---AELHSKLQSSEV 989
Cdd:pfam12128 491 QSELRQArkRRDQASEALRQASRRLEE-RQSALDELELQLFpQAGTLLHFLRKEAPDWEQSIGKVispELLHRTDLDPEV 569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 990 EVKSKCEELSsLHG--------QLKEARAENSQLTERIRSIEALLeagqaQDTQASHAEANQQQTRL-KELESQVSCLEK 1060
Cdd:pfam12128 570 WDGSVGGELN-LYGvkldlkriDVPEWAASEEELRERLDKAEEAL-----QSAREKQAAAEEQLVQAnGELEKASREETF 643
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1061 ETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETL-------------- 1126
Cdd:pfam12128 644 ARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKreartekqaywqvv 723
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1127 -------LALLPGLSISAHQNYAEWLQEFKEKGSELLKKpptLEPSMDIVLKLREAEET--------------------- 1178
Cdd:pfam12128 724 egaldaqLALLKAAIAARRSGAKAELKALETWYKRDLAS---LGVDPDVIAKLKREIRTlerkieriavrrqevlryfdw 800
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1179 -QNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTS 1257
Cdd:pfam12128 801 yQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDAN 880
|
....*..
gi 568918950 1258 HLEAELE 1264
Cdd:pfam12128 881 SEQAQGS 887
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
911-1081 |
6.33e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.79 E-value: 6.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 911 EQQRKALEAKAATFEKQVLQLQASHK-----ESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQ 985
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKNGlvdlsEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 986 SSEVevkskceeLSSLHGQLKEARAENSQLTER-------IRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCL 1058
Cdd:COG3206 261 QSPV--------IQQLRAQLAELEAELAELSARytpnhpdVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASL 332
|
170 180
....*....|....*....|...
gi 568918950 1059 EKETSELKEAMEQQKGKNNDLRE 1081
Cdd:COG3206 333 QAQLAQLEARLAELPELEAELRR 355
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
936-1329 |
9.97e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 9.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 936 KESEEALQKRLEEVTRELCRAQTSHAN-LRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQ 1014
Cdd:TIGR02169 183 EENIERLDLIIDEKRQQLERLRREREKaERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1015 LTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAE 1094
Cdd:TIGR02169 263 LEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1095 RACEEKLRSLTQAKEESEKQlhlaeAQTKETLLALLPGLSISAhqnyAEWLQEFKekgsellkkpptlepsmDIVLKLRE 1174
Cdd:TIGR02169 343 REIEEERKRRDKLTEEYAEL-----KEELEDLRAELEEVDKEF----AETRDELK-----------------DYREKLEK 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1175 AEETQNSLQAECDQyrtilaetegmLKDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESsdqvre 1254
Cdd:TIGR02169 397 LKREINELKRELDR-----------LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQ------ 459
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568918950 1255 htshleaelekhmaaasaecqnyakevagLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTR 1329
Cdd:TIGR02169 460 -----------------------------LAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
200-388 |
1.11e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 50.38 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 200 KGQGAQNQAKKGEGAQNQGKKGEGAQNQAKKGE----GAQNQAKKGEGAQNQGKKGEGAQNQAKKGEG----GQNQAKKG 271
Cdd:TIGR00927 707 KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEevedEGEGEAEGKHEVETEGDRKETEHEGETEAEGkedeDEGEIQAG 786
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 272 EGAQNQGKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQ--SKKGEGAQNQAKKGEGGQNQAK 349
Cdd:TIGR00927 787 EDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQgeAKQDEKGVDGGGGSDGGDSEEE 866
|
170 180 190
....*....|....*....|....*....|....*....
gi 568918950 350 KGEGAQNQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQNQ 388
Cdd:TIGR00927 867 EEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPETRQKQ 905
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
760-994 |
1.23e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 760 LKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASekakaaageakVKKQLVAREQEIAAVQARMQASyrdhVKEVQQLQ 839
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAA-----------LARRIRALEQELAALEAELAEL----EKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 840 GKIRTLQEQLENgpntQLARLQQENSILRDALnqatsQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEA 919
Cdd:COG4942 97 AELEAQKEELAE----LLRALYRLGRQPPLAL-----LLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568918950 920 KAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSK 994
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
757-1128 |
1.26e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.82 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEdaavaksKLRELNkemaSEKAKAAAGEAKVKKQLVAREQEIAAVQAR---MQASYRDHVK 833
Cdd:pfam10174 347 VDALRLRLEEKESFLNKKTK-------QLQDLT----EEKSTLAGEIRDLKDMLDVKERKINVLQKKienLQEQLRDKDK 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 834 EVQQLQGKIRTLQEQLENgPNTQLARLQQ---ENSILRDALNQATSQVESKQNTELAKLRQElskvNKELVEKSEASRQE 910
Cdd:pfam10174 416 QLAGLKERVKSLQTDSSN-TDTALTTLEEalsEKERIIERLKEQREREDRERLEELESLKKE----NKDLKEKVSALQPE 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 911 EQQRKA----LEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHanlradaeKAQEQQQRVAELHSKLQS 986
Cdd:pfam10174 491 LTEKESslidLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAH--------NAEEAVRTNPEINDRIRL 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 987 SEVEVKSKCEE-------LSSLHGQLKEARAENSQLTERIRSIEAL-LEAGQAQDTQASHAEANQQQTRLKELESQVSCL 1058
Cdd:pfam10174 563 LEQEVARYKEEsgkaqaeVERLLGILREVENEKNDKDKKIAELESLtLRQMKEQNKKVANIKHGQQEMKKKGAQLLEEAR 642
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568918950 1059 EKETSELKEAMEQQKGKNNDLREKNWKAMEA----LALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLA 1128
Cdd:pfam10174 643 RREDNLADNSQQLQLEELMGALEKTRQELDAtkarLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQEALLA 716
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
238-1028 |
1.43e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 238 AKKGEGAQNQGKKGEGAQNQAKKGEGGQ-NQAKKGEGAQNQGKKGEGAQnQGKKGEGAQ--NQAKKGEGAQNQAKKGEGA 314
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKaEEARKAEEAKKKAEDARKAE-EARKAEDARkaEEARKAEDAKRVEIARKAE 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 315 QNQGKKGEGAQNQSKKGEGAQN--QAKKGEggqnQAKKGEGAQnQAKKGEGAQNQAKKGEGVQNQAKKGVEGAQ--NQGK 390
Cdd:PTZ00121 1162 DARKAEEARKAEDAKKAEAARKaeEVRKAE----ELRKAEDAR-KAEAARKAEEERKAEEARKAEDAKKAEAVKkaEEAK 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 391 KGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGE---GAQNQGKKGEGAQN 467
Cdd:PTZ00121 1237 KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEekkKADEAKKKAEEAKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 468 QGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQnqGKKGEGAQNQGKKGEGPQNQAKK-GEGAQNQGKKGEGAQ 546
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA--ADEAEAAEEKAEAAEKKKEEAKKkADAAKKKAEEKKKAD 1394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 547 NQGKKGEGAQNQGKKAEGVQSQSKKGEGTQNQGKKGDGNPNQGKKGEgasnQNRKTDTVANQGTKQEGVSNQVKKSEgsp 626
Cdd:PTZ00121 1395 EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAE----EAKKADEAKKKAEEAKKAEEAKKKAE--- 1467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 627 nQGKKAEGAPNQGKKKDGSPSQAKKVDAAANQGKKSEMAPAQGQKASMVQSQEAPKQDAPAKKKSGSRKKGEpgppdcdg 706
Cdd:PTZ00121 1468 -EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADE-------- 1538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 707 plflpyktlvstvgsmvFSEGEAQRLIEILSEKTGViqdtwHKATQKgdpvailkRQLEEKEKllatEQEDAAVAKSKLR 786
Cdd:PTZ00121 1539 -----------------AKKAEEKKKADELKKAEEL-----KKAEEK--------KKAEEAKK----AEEDKNMALRKAE 1584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 787 ELNKemASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQAsyrDHVKEVQQLQGKIRTLQEQLEngpntqlarlqqensi 866
Cdd:PTZ00121 1585 EAKK--AEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA---EELKKAEEEKKKVEQLKKKEA---------------- 1643
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 867 lrdalnqatsqvESKQNTELAKLRQELSKVNKElvekSEASRQEEQQRKALEAKAATFEKqvlqlqashKESEEALQKRL 946
Cdd:PTZ00121 1644 ------------EEKKKAEELKKAEEENKIKAA----EEAKKAEEDKKKAEEAKKAEEDE---------KKAAEALKKEA 1698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 947 EEVTR--ELCRAQTSHANLRADAEKAQEQQQRVAElhsKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEA 1024
Cdd:PTZ00121 1699 EEAKKaeELKKKEAEEKKKAEELKKAEEENKIKAE---EAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRK 1775
|
....
gi 568918950 1025 LLEA 1028
Cdd:PTZ00121 1776 EKEA 1779
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
823-1129 |
1.70e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 49.69 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 823 RMQASYRDHV--KEVQQLQGKIRTLQEQLENGpNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKEL 900
Cdd:COG5022 798 KLQPLLSLLGsrKEYRSYLACIIKLQKTIKRE-KKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQR 876
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 901 VEKSEASRQEEQQ----RKALEAKAATFEKQVLQLQASHKESE-EALQKRLEEVTRELCraqtshANLRADAEKAQEQQQ 975
Cdd:COG5022 877 VELAERQLQELKIdvksISSLKLVNLELESEIIELKKSLSSDLiENLEFKTELIARLKK------LLNNIDLEEGPSIEY 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 976 RVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQ--DTQASHAEANQQQTRLKELES 1053
Cdd:COG5022 951 VKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQygALQESTKQLKELPVEVAELQS 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1054 QVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAER----ACEEKLRSLTQAKEESEKQLHLAEAQTKETLLAL 1129
Cdd:COG5022 1031 ASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRrensLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVK 1110
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
211-569 |
1.73e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 49.23 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 211 GEGAQNQGKKGEGAqnqakkGEGAQNQAKKGEGAQNQGKKGEGAQN---QAKKGEGGQNQAKKGE-GAQNQGKKGEGAQN 286
Cdd:cd21118 24 GEGTGAGESAGHGL------GDAISHGIGEAVGQGAKEAASSGIQNalgQGHGEEGGSTLGSRGDvFEHRLGEAARSLGN 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 287 QGKK-GEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQSKKGEGAqNQAKKGEGGQNQAKKGEGAQNQAKKGeGAQ 365
Cdd:cd21118 98 AGNEiGRQAEDIIRHGVDAVHNSWQGSGGHGAYGSQGGPGVQGHGIPGG-TGGPWASGGNYGTNSLGGSVGQGGNG-GPL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 366 NQAKKGEGVQNQAKKGVEGAQNQgKKGEANQNQAKKGEGGQNQTKKgegpqnqgkkgeaaqkqdkkiEGAQNQGKKPEGT 445
Cdd:cd21118 176 NYGTNSQGAVAQPGYGTVRGNNQ-NSGCTNPPPSGSHESFSNSGGS---------------------SSSGSSGSQGSHG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 446 SNQGKKGEGAQNQGKKGEGAQNQGKKG-EGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGeGAQNQGKKGEG 524
Cdd:cd21118 234 SNGQGSSGSSGGQGNGGNNGSSSSNSGnSGGSNGGSSGNSGSGSGGSSSGGSNGWGGSSSSGGSGGSG-GGNKPECNNPG 312
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568918950 525 PQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQS 569
Cdd:cd21118 313 NDVRMAGGGGSQGSKESSGSHGSNGGNGQAEAVGGLNTLNSDAST 357
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
361-645 |
2.51e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 48.46 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 361 GEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQ----TKKGEGPQNQGKKGEAAQ-------KQD 429
Cdd:cd21118 24 GEGTGAGESAGHGLGDAISHGIGEAVGQGAKEAASSGIQNALGQGHGEeggsTLGSRGDVFEHRLGEAARslgnagnEIG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 430 KKIEGAQNQGKKPEGTSNQGKKGEGAQN-QGKKGEGAQ-----NQGKKGEGAQNQGKKGEGAQNQGKKGeGAQNQGKKGE 503
Cdd:cd21118 104 RQAEDIIRHGVDAVHNSWQGSGGHGAYGsQGGPGVQGHgipggTGGPWASGGNYGTNSLGGSVGQGGNG-GPLNYGTNSQ 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 504 GAQNQ-GKKGEGAQNQ--------GKKGEGPQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGEG 574
Cdd:cd21118 183 GAVAQpGYGTVRGNNQnsgctnppPSGSHESFSNSGGSSSSGSSGSQGSHGSNGQGSSGSSGGQGNGGNNGSSSSNSGNS 262
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568918950 575 TQNQGkkgDGNPNQG--KKGEGASNQNRKTDTVANQGTKQEGVSNQVKKSEGSPNQGKKAEGAPNQGKKKDGS 645
Cdd:cd21118 263 GGSNG---GSSGNSGsgSGGSSSGGSNGWGGSSSSGGSGGSGGGNKPECNNPGNDVRMAGGGGSQGSKESSGS 332
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
880-1416 |
2.63e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 880 SKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTS 959
Cdd:TIGR00618 162 SKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 960 HANLRADAEKAQEQQQRVAELHsklqssevEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQA-QDTQASH 1038
Cdd:TIGR00618 242 HAYLTQKREAQEEQLKKQQLLK--------QLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIeQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1039 AEANQQQTRLKELESQVSCLEKETSELKEA---MEQQKGKNNDLREKNWKAMEALALAERACE--EKLRSLTQAKEESEK 1113
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQrrlLQTLHSQEIHIRDAHEVATSIREISCQQHTltQHIHTLQQQKTTLTQ 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1114 QLHLA---------EAQTKETLLALLPGL---------SISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMdiVLKLREA 1175
Cdd:TIGR00618 394 KLQSLckeldilqrEQATIDTRTSAFRDLqgqlahakkQQELQQRYAELCAAAITCTAQCEKLEKIHLQES--AQSLKER 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1176 EETQNSLQAECDQYRTILAETEG---MLKDLQKSVEEEERVWKAKV------GAAEEELHKSRVTVKHLEDIVEKLKGEL 1246
Cdd:TIGR00618 472 EQQLQTKEQIHLQETRKKAVVLArllELQEEPCPLCGSCIHPNPARqdidnpGPLTRRMQRGEQTYAQLETSEEDVYHQL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1247 ESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAE 1326
Cdd:TIGR00618 552 TSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVR 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1327 QTRRQKlTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQEL---LKTTQEQL 1403
Cdd:TIGR00618 632 LHLQQC-SQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLaqcQTLLRELE 710
|
570
....*....|...
gi 568918950 1404 TKEKDTVKKLQEQ 1416
Cdd:TIGR00618 711 THIEEYDREFNEI 723
|
|
| dermokine |
cd21118 |
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a ... |
271-597 |
2.66e-05 |
|
dermokine; Dermokine, also known as epidermis-specific secreted protein SK30/SK89, is a skin-specific glycoprotein that may play a regulatory role in the crosstalk between barrier dysfunction and inflammation, and therefore play a role in inflammatory diseases such as psoriasis. Dermokine is one of the most highly expressed proteins in differentiating keratinocytes, found mainly in the spinous and granular layers of the epidermis, but also in the epithelia of the small intestine, macrophages of the lung, and endothelial cells of the lung. Mouse dermokine has been reported to be encoded by 22 exons, and its expression leads to alpha, beta, and gamma transcripts.
Pssm-ID: 411053 [Multi-domain] Cd Length: 495 Bit Score: 48.46 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 271 GEGAQNQGKKGEGAqnqgkkGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGEG-AQNQSKKGEGAQNQAKKGEGGQNQAK 349
Cdd:cd21118 24 GEGTGAGESAGHGL------GDAISHGIGEAVGQGAKEAASSGIQNALGQGHGeEGGSTLGSRGDVFEHRLGEAARSLGN 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 350 KGEGAQNQAKK--GEGAQNQAKKGEGVQNQAKKGVEGAQNQGKKGEANQNQAKKGEGGQNQTKKGEGPQNQGKKGeaaqk 427
Cdd:cd21118 98 AGNEIGRQAEDiiRHGVDAVHNSWQGSGGHGAYGSQGGPGVQGHGIPGGTGGPWASGGNYGTNSLGGSVGQGGNG----- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 428 qdkkieGAQNQGKKPEGTSNQGkkGEGAQNQGKKGEGAQNQGKKGegaqnqgkKGEGAQNQGKkGEGAQNQGKKGEGAQN 507
Cdd:cd21118 173 ------GPLNYGTNSQGAVAQP--GYGTVRGNNQNSGCTNPPPSG--------SHESFSNSGG-SSSSGSSGSQGSHGSN 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 508 QGKKGEGaqnQGKKGEGPQNQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKK--GEGTQNQGKKGDGN 585
Cdd:cd21118 236 GQGSSGS---SGGQGNGGNNGSSSSNSGNSGGSNGGSSGNSGSGSGGSSSGGSNGWGGSSSSGGsgGSGGGNKPECNNPG 312
|
330
....*....|..
gi 568918950 586 PNQGKKGEGASN 597
Cdd:cd21118 313 NDVRMAGGGGSQ 324
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
826-1072 |
3.00e-05 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 47.61 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 826 ASYRDHVKEVQQ----LQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQvESKQNTELAKLRQEL----SKVN 897
Cdd:pfam00038 14 ASYIDKVRFLEQqnklLETKISELRQKKGAEPSRLYSLYEKEIEDLRRQLDTLTVE-RARLQLELDNLRLAAedfrQKYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 898 KELVEKSEASRQEEQQRKALEakAATFEKQVLQLQASHKESEEALQKRL--EEVTRELCRAQTSHANLRADAEKAQEQQQ 975
Cdd:pfam00038 93 DELNLRTSAENDLVGLRKDLD--EATLARVDLEAKIESLKEELAFLKKNheEEVRELQAQVSDTQVNVEMDAARKLDLTS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 976 RVAELHSK--------LQSSEVEVKSKCEELSSLHGQ----LKEARAENSQLTERIRSIEALLEA--GQAQDTQASHAEA 1041
Cdd:pfam00038 171 ALAEIRAQyeeiaaknREEAEEWYQSKLEELQQAAARngdaLRSAKEEITELRRTIQSLEIELQSlkKQKASLERQLAET 250
|
250 260 270
....*....|....*....|....*....|..
gi 568918950 1042 NQQQTR-LKELESQVSCLEKETSELKEAMEQQ 1072
Cdd:pfam00038 251 EERYELqLADYQELISELEAELQETRQEMARQ 282
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
759-1422 |
3.10e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.80 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 759 ILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMAsekakaaageakvkkQLVAREQEIAAvqaRMQASyRDHVKEVQ-- 836
Cdd:COG3096 282 ELSERALELRRELFGARRQLAEEQYRLVEMARELE---------------ELSARESDLEQ---DYQAA-SDHLNLVQta 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 -QLQGKIRTLQEQLENGPntqlARLQQENSILRDALNQATSQVESKQNTELA--KLRQELSKVNKELVEKSEASRQEEQQ 913
Cdd:COG3096 343 lRQQEKIERYQEDLEELT----ERLEEQEEVVEEAAEQLAEAEARLEAAEEEvdSLKSQLADYQQALDVQQTRAIQYQQA 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 914 RKALEaKAatfeKQVLQL----QASHKESEEALQKRLEEVTRELCRAQTShanlRADAEKAQEQQQRVAELHSKLqSSEV 989
Cdd:COG3096 419 VQALE-KA----RALCGLpdltPENAEDYLAAFRAKEQQATEEVLELEQK----LSVADAARRQFEKAYELVCKI-AGEV 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 990 E-----------------VKSKCEELSSLHGQLKEARaensQLTERIRSIEALLEA-GQAQDTQASHAE-----ANQQQT 1046
Cdd:COG3096 489 ErsqawqtarellrryrsQQALAQRLQQLRAQLAELE----QRLRQQQNAERLLEEfCQRIGQQLDAAEeleelLAELEA 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1047 RLKELESQVSCLEKETSELKEAMEQQKGKNNDLREK--NW-KAMEALALAERACEEKL---RSLTQAKE---ESEKQLHL 1117
Cdd:COG3096 565 QLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARapAWlAAQDALERLREQSGEALadsQEVTAAMQqllEREREATV 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1118 AE---AQTKETLLALLPGLSISAHQNYAEwLQEFKEK-GSELLKK---------PPTLE----PSMD--IVLKLREAEET 1178
Cdd:COG3096 645 ERdelAARKQALESQIERLSQPGGAEDPR-LLALAERlGGVLLSEiyddvtledAPYFSalygPARHaiVVPDLSAVKEQ 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1179 QNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWkakVGAAEEELHKSRVTVKHL------EDIVEKLKGELESSDQ- 1251
Cdd:COG3096 724 LAGLEDCPEDLYLIEGDPDSFDDSVFDAEELEDAVV---VKLSDRQWRYSRFPEVPLfgraarEKRLEELRAERDELAEq 800
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1252 -------VREH---TSHLEAELEKHMAAASAEcqNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLE---- 1317
Cdd:COG3096 801 yakasfdVQKLqrlHQAFSQFVGGHLAVAFAP--DPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQllnk 878
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1318 -RTEATLEAEQT---RRQKLTAEFEEAQRTACRIQEELEKLRAAGPLES---SGKEEITQLKERLEKEKRLTSDLGRAAI 1390
Cdd:COG3096 879 lLPQANLLADETladRLEELREELDAAQEAQAFIQQHGKALAQLEPLVAvlqSDPEQFEQLQADYLQAKEQQRRLKQQIF 958
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 568918950 1391 KLQELLKT--------TQEQLTKEKDTVKKLQEQLGKAED 1422
Cdd:COG3096 959 ALSEVVQRrphfsyedAVGLLGENSDLNEKLRARLEQAEE 998
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
940-1212 |
3.26e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.80 E-value: 3.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 940 EALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVE-VKSKCEELSSLHGQLKEARAENSQLTER 1018
Cdd:COG3096 839 AALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQANLLADEtLADRLEELREELDAAQEAQAFIQQHGKA 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1019 IRSIEALLEAGQA--QDTQASHAEANQQQTRLKELESQVSCLEkETSELKEAM-----EQQKGKNNDLREKnwkameala 1091
Cdd:COG3096 919 LAQLEPLVAVLQSdpEQFEQLQADYLQAKEQQRRLKQQIFALS-EVVQRRPHFsyedaVGLLGENSDLNEK--------- 988
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1092 laeraCEEKLRSLTQAKEESEKQLHLAEAQTKETlLALLPGLSiSAHQNYAEWLQEFKEKGSEL-LKKPPTLEPSMDIVL 1170
Cdd:COG3096 989 -----LRARLEQAEEARREAREQLRQAQAQYSQY-NQVLASLK-SSRDAKQQTLQELEQELEELgVQADAEAEERARIRR 1061
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 568918950 1171 KLREAEETQNslQAECDQYRTILAETEGMLKDLQKSVEEEER 1212
Cdd:COG3096 1062 DELHEELSQN--RSRRSQLEKQLTRCEAEMDSLQKRLRKAER 1101
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1235-1422 |
4.42e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 47.93 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1235 LEDIVEKLKGELESSDQVREHtsHLEAELEKHMAaasaECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKT 1314
Cdd:COG2433 382 LEELIEKELPEEEPEAEREKE--HEERELTEEEE----EIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARS 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1315 QlERTEATLEAEQTRRQKLTAefeeaqrtacRIQEELEKLRaagplessgkEEITQLKERLEKEKRL-TSDLGRAAIKLQ 1393
Cdd:COG2433 456 E-ERREIRKDREISRLDREIE----------RLERELEEER----------ERIEELKRKLERLKELwKLEHSGELVPVK 514
|
170 180
....*....|....*....|....*....
gi 568918950 1394 ELlkttqEQLTKEkdTVKKLQEQLGKAED 1422
Cdd:COG2433 515 VV-----EKFTKE--AIRRLEEEYGLKEG 536
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
748-1081 |
4.52e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.14 E-value: 4.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 748 HKATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAKVKKQLVAR----EQEIAAVQAR 823
Cdd:PRK03918 377 LKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGreltEEHRKELLEE 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 824 MQASYRDHVKEVQQLQGKIRTLQEQLENGPNTqlarLQQENSILRdalnqatsqvESKQNTELAKLRQELSKVNKElvek 903
Cdd:PRK03918 457 YTAELKRIEKELKEIEEKERKLRKELRELEKV----LKKESELIK----------LKELAEQLKELEEKLKKYNLE---- 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 904 sEASRQEEQQRKaLEAKAATFEKQVLQLqASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEK-----AQEQQQRVA 978
Cdd:PRK03918 519 -ELEKKAEEYEK-LKEKLIKLKGEIKSL-KKELEKLEELKKKLAELEKKLDELEEELAELLKELEElgfesVEELEERLK 595
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 979 ELHS------KLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQqqtRLKELE 1052
Cdd:PRK03918 596 ELEPfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELRE---EYLELS 672
|
330 340
....*....|....*....|....*....
gi 568918950 1053 SQVSCLEKETSELKEAMEQQKGKNNDLRE 1081
Cdd:PRK03918 673 RELAGLRAELEELEKRREEIKKTLEKLKE 701
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1058-1421 |
4.64e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1058 LEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLpglSISA 1137
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE---KLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1138 HQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAE-----TEGMLKDLQKSVEEEER 1212
Cdd:COG4717 124 LLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEElleqlSLATEEELQDLAEELEE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1213 VWKaKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVRE-------------------HTSHLEAELEKHMAAASAE 1273
Cdd:COG4717 204 LQQ-RLAELEEELEEAQEELEELEEELEQLENELEAAALEERlkearlllliaaallallgLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1274 CQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLER------------TEATLEAEQTRRQKLTAEFEEAQ 1341
Cdd:COG4717 283 LGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAlglppdlspeelLELLDRIEELQELLREAEELEEE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1342 RTACRIQEELEKLRAAGPLES---------------SGKEEITQLKERLEKEKRLTSDLGRAAIK--LQELLKTTQEQLT 1404
Cdd:COG4717 363 LQLEELEQEIAALLAEAGVEDeeelraaleqaeeyqELKEELEELEEQLEELLGELEELLEALDEeeLEEELEELEEELE 442
|
410
....*....|....*..
gi 568918950 1405 KEKDTVKKLQEQLGKAE 1421
Cdd:COG4717 443 ELEEELEELREELAELE 459
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
834-1378 |
4.77e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.19 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 834 EVQQLQGKIRTLQEQLENGPNT---QLARLQQENSILRDALNQATSQVESKqnteLAKLRQELSKVNKELVEkseaSRQE 910
Cdd:pfam15921 293 QANSIQSQLEIIQEQARNQNSMymrQLSDLESTVSQLRSELREAKRMYEDK----IEELEKQLVLANSELTE----ARTE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 911 EQQrkaLEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVE 990
Cdd:pfam15921 365 RDQ---FSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 991 VKSKCE-ELSSLHGQlKEARAENSQLTERIRSIEALLE------AGQAQDTQASHAEANQQQTRLKELESQVSCLEKETS 1063
Cdd:pfam15921 442 CQGQMErQMAAIQGK-NESLEKVSSLTAQLESTKEMLRkvveelTAKKMTLESSERTVSDLTASLQEKERAIEATNAEIT 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1064 ELKEAM-----EQQKGKNNDLREKNWKA-MEALALaERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISA 1137
Cdd:pfam15921 521 KLRSRVdlklqELQHLKNEGDHLRNVQTeCEALKL-QMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEI 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1138 HQNYAEwLQEFK-------EKGSELLKKPPTLE-PSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEE 1209
Cdd:pfam15921 600 NDRRLE-LQEFKilkdkkdAKIRELEARVSDLElEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEV 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1210 EERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLL 1289
Cdd:pfam15921 679 LKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMT 758
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1290 ESQSQLDEAKSEAQKQSDELALLKTQlerteatleaeqtrRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEIT 1369
Cdd:pfam15921 759 NANKEKHFLKEEKNKLSQELSTVATE--------------KNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQ 824
|
....*....
gi 568918950 1370 QLKERLEKE 1378
Cdd:pfam15921 825 DIIQRQEQE 833
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1123-1360 |
4.84e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1123 KETLLALLPGLSISAHQNYAEWLqeFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKD 1202
Cdd:COG4717 36 KSTLLAFIRAMLLERLEKEADEL--FKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1203 LQKSVEEEERVWKAKvgAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAEcqnyakeva 1282
Cdd:COG4717 114 LREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEEL--------- 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568918950 1283 gLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTAcRIQEELEKLRAAGPL 1360
Cdd:COG4717 183 -LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE-RLKEARLLLLIAAAL 258
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
757-1415 |
4.94e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 48.04 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEmASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQ 836
Cdd:pfam02463 347 LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL-ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEK 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 QLQGKIRTLQEQLENGPNTQLArLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKA 916
Cdd:pfam02463 426 KEELEILEEEEESIELKQGKLT-EEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESK 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 917 LEAKAATFEKQVLQLQASHKESEEALQKRLEEVTrELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCE 996
Cdd:pfam02463 505 ARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAV-ENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLL 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 997 ELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQASHAEANQQQTRLKELES------------QVSCLEKETSE 1064
Cdd:pfam02463 584 IPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESakakesglrkgvSLEEGLAEKSE 663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1065 LKEAMEQQKGKNNDLREKNWKA-MEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLSISAHQNYAE 1143
Cdd:pfam02463 664 VKASLSELTKELLEIQELQEKAeSELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQ 743
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1144 WLQEFKEKGSELLKKPPTLEP------SMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLK-------DLQKSVEEE 1210
Cdd:pfam02463 744 KIDEEEEEEEKSRLKKEEKEEekselsLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEeelkeeaELLEEEQLL 823
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1211 ERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHmaaaSAECQNYAKEVAGLRQLLLE 1290
Cdd:pfam02463 824 IEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEEL----EEQKLKDELESKEEKEKEEK 899
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1291 SQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQ 1370
Cdd:pfam02463 900 KELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMA 979
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 568918950 1371 LKERLEKEKRLTSDLGRAAIKLQEllKTTQEQLTKEKDTVKKLQE 1415
Cdd:pfam02463 980 IEEFEEKEERYNKDELEKERLEEE--KKKLIRAIIEETCQRLKEF 1022
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
845-1349 |
6.13e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 47.44 E-value: 6.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 845 LQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNK----ELVEKSEASRQEEQQRKALEAK 920
Cdd:pfam07111 130 VRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLNSLETkragEAKQLAEAQKEAELLRKQLSKT 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 921 AATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQ--TSHANLRADAEKAQEQ----QQRVAELHSKLQSSEVEVKSK 994
Cdd:pfam07111 210 QEELEAQVTLVESLRKYVGEQVPPEVHSQTWELERQEllDTMQHLQEDRADLQATvellQVRVQSLTHMLALQEEELTRK 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 995 CEELSSLHGQLkeARAENSQLTERIRSIEALLEAGQAQDTQASHAeANQQQTRLKELESQVSCLEKETSELKEAM----- 1069
Cdd:pfam07111 290 IQPSDSLEPEF--PKKCRSLLNRWREKVFALMVQLKAQDLEHRDS-VKQLRGQVAELQEQVTSQSQEQAILQRALqdkaa 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1070 --EQQKGKNNDLREKNWKAMEALALAER---ACEEKLRSLTQAKEESEKQLHLAEAQTKETLlALLPGLS---------- 1134
Cdd:pfam07111 367 evEVERMSAKGLQMELSRAQEARRRQQQqtaSAEEQLKFVVNAMSSTQIWLETTMTRVEQAV-ARIPSLSnrlsyavrkv 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1135 --ISAHQNYAEWLQEFKEKGSELLKKPPTLEpsMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDlqkSVEEEER 1212
Cdd:pfam07111 446 htIKGLMARKVALAQLRQESCPPPPPAPPVD--ADLSLELEQLREERNRLDAELQLSAHLIQQEVGRARE---QGEAERQ 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1213 VWKAKVGAAEEELHKSRvtvKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEV-AGLRQLLLES 1291
Cdd:pfam07111 521 QLSEVAQQLEQELQRAQ---ESLASVGQQLEVARQGQQESTEEAASLRQELTQQQEIYGQALQEKVAEVeTRLREQLSDT 597
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 568918950 1292 QSQLDEAKSEAQKQSdeLALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQE 1349
Cdd:pfam07111 598 KRRLNEARREQAKAV--VSLRQIQHRATQEKERNQELRRLQDEARKEEGQRLARRVQE 653
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
755-1419 |
8.11e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.37 E-value: 8.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 755 DPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAkvkkQLVAREQEIAAVQARMQ---ASYRDH 831
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTE----EYAELKEELEDLRAELEevdKEFAET 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 832 VKEVQQLQGKIRTLQEQLENgpntqlarLQQENSILRDALNQATSQVESKQNtELAKLRQELSKVNKELVEKSEASRQEE 911
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINE--------LKRELDRLQEELQRLSEELADLNA-AIAGIEAKINELEEEKEDKALEIKKQE 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 912 QQRKALEAKAATFEKQVLQLqashKESEEALQKRLEEVTRELCR--AQTSHANLRADAEKAQEQQQR---------VAEL 980
Cdd:TIGR02169 455 WKLEQLAADLSKYEQELYDL----KEEYDRVEKELSKLQRELAEaeAQARASEERVRGGRAVEEVLKasiqgvhgtVAQL 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 981 HS---------------KLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTeRIRSIEALLEAGQA-------------- 1031
Cdd:TIGR02169 531 GSvgeryataievaagnRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLN-KMRDERRDLSILSEdgvigfavdlvefd 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1032 -----------QDT----QASHAEANQQQTRLKELESQVscLEKETSELKEAMEQQKGKNNDLREKNwkamEALALAER- 1095
Cdd:TIGR02169 610 pkyepafkyvfGDTlvveDIEAARRLMGKYRMVTLEGEL--FEKSGAMTGGSRAPRGGILFSRSEPA----ELQRLRERl 683
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1096 -ACEEKLRSLTQAKEESEKQLHLAEAQTKETllallpGLSISAHQNYAEWLQEFKEKGSELLKKpptLEPSMDIVLKLRE 1174
Cdd:TIGR02169 684 eGLKRELSSLQSELRRIENRLDELSQELSDA------SRKIGEIEKEIEQLEQEEEKLKERLEE---LEEDLSSLEQEIE 754
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1175 AEET-QNSLQAECDQYRTILAETEGMLKDLQKS---------------VEEEERVWKAKVGAAEEELHKSRVTVKHLEDI 1238
Cdd:TIGR02169 755 NVKSeLKELEARIEELEEDLHKLEEALNDLEARlshsripeiqaelskLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1239 VEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLER 1318
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEK 914
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1319 TEATLEAEQTRRQKLTAEFEEAQRTACRIQEEleklraagPLESSGKEEITQLKERLEKEKRLTSDLGRAAI-------K 1391
Cdd:TIGR02169 915 KRKRLSELKAKLEALEEELSEIEDPKGEDEEI--------PEEELSLEDVQAELQRVEEEIRALEPVNMLAIqeyeevlK 986
|
730 740
....*....|....*....|....*...
gi 568918950 1392 LQELLKTTQEQLTKEKDTVKKLQEQLGK 1419
Cdd:TIGR02169 987 RLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1167-1428 |
8.32e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.37 E-value: 8.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1167 DIVLKLREAEETQNSLQAEcdQYRTILAETEGMLKDLQKSVEEEERvwkaKVGAAEEELHKSRVTVKHLEDIVEKLKGEl 1246
Cdd:TIGR02169 215 ALLKEKREYEGYELLKEKE--ALERQKEAIERQLASLEEELEKLTE----EISELEKRLEEIEQLLEELNKKIKDLGEE- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1247 eSSDQVREHTSHLEAELEK---HMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATL 1323
Cdd:TIGR02169 288 -EQLRVKEKIGELEAEIASlerSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEEL 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1324 EAEQTRRQKLTAEFEEAQRTACRIQEELEKL-RAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQEL------- 1395
Cdd:TIGR02169 367 EDLRAELEEVDKEFAETRDELKDYREKLEKLkREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELeeekedk 446
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 568918950 1396 ----------LKTTQEQLTKEKDTVKKLQEQLGKAEDGSSSKE 1428
Cdd:TIGR02169 447 aleikkqewkLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQ 489
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
942-1423 |
9.02e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 9.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 942 LQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAElhsklqSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRS 1021
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAE------EKEEEYAELQEELEELEEELEELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1022 IEALLEAgqaqdtQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREknwkamealalAERACEEKL 1101
Cdd:COG4717 121 LEKLLQL------LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAE-----------LQEELEELL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1102 RSLTQAKEESEKQLhlaeAQTKETLLAllpglsisAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKLREAEETQNS 1181
Cdd:COG4717 184 EQLSLATEEELQDL----AEELEELQQ--------RLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1182 LQAEcdqyrTILAETEGMLKDLQKSVEEEERVWKAKVG-AAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLe 1260
Cdd:COG4717 252 LLIA-----AALLALLGLGGSLLSLILTIAGVLFLVLGlLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELL- 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1261 AELEKHMAAASAECQNYAKEVAGLRQLLlesqSQLDEAKSEAQKQSDElALLKTQLERTEATLEAEQTRRQKLTAEFEEA 1340
Cdd:COG4717 326 AALGLPPDLSPEELLELLDRIEELQELL----REAEELEEELQLEELE-QEIAALLAEAGVEDEEELRAALEQAEEYQEL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1341 QRTACRIQEELEKLrAAGPLESSGKEEITQLKERLEKekrltsdlgraaikLQELLKTTQEQLTKEKDTVKKLQEQLGKA 1420
Cdd:COG4717 401 KEELEELEEQLEEL-LGELEELLEALDEEELEEELEE--------------LEEELEELEEELEELREELAELEAELEQL 465
|
...
gi 568918950 1421 EDG 1423
Cdd:COG4717 466 EED 468
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
837-1065 |
9.67e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.81 E-value: 9.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 837 QLQGKIRTLQE--QLENGPNTQLARLQQENSILRDALNQATSQVESK---QNTELAKLRQELSKVNKELVEKSEASRQEE 911
Cdd:pfam07888 35 RLEECLQERAEllQAQEAANRQREKEKERYKRDREQWERQRRELESRvaeLKEELRQSREKHEELEEKYKELSASSEELS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 912 QQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCRAQTSHANLRadaekaqEQQQRVAELHSKLQSSEVEV 991
Cdd:pfam07888 115 EEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRK-------EEEAERKQLQAKLQQTEEEL 187
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568918950 992 KSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQ--ASHAEANQQQTRLKELESQVSCLEKETSEL 1065
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAEneALLEELRSLQERLNASERKVEGLGEELSSM 263
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
931-1421 |
1.24e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.89 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 931 LQASHKESEEALQK--RLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAelhsklQSSEVEVKSKCEELSSLHGQLKEA 1008
Cdd:TIGR00618 158 LKAKSKEKKELLMNlfPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLT------LCTPCMPDTYHERKQVLEKELKHL 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1009 RAENSQLTERIRSIEALLEAGQAQDTQasHAEANQQQTRLKELESQvsclEKETSELKEAMEQQKGKNNDLREKNWKAME 1088
Cdd:TIGR00618 232 REALQQTQQSHAYLTQKREAQEEQLKK--QQLLKQLRARIEELRAQ----EAVLEETQERINRARKAAPLAAHIKAVTQI 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1089 ALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALLPGLsISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDI 1168
Cdd:TIGR00618 306 EQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTL-HSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1169 VLKLREAEETQNSLQAECDQYR----TILAET------EGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDI 1238
Cdd:TIGR00618 385 QQQKTTLTQKLQSLCKELDILQreqaTIDTRTsafrdlQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQES 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1239 VEKLKGELESSDQVREHTshlEAELEKHmaaasAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLER 1318
Cdd:TIGR00618 465 AQSLKEREQQLQTKEQIH---LQETRKK-----AVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQT 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1319 TEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKT 1398
Cdd:TIGR00618 537 YAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHA 616
|
490 500
....*....|....*....|...
gi 568918950 1399 TQEQLTKEKDTVKKLQEQLGKAE 1421
Cdd:TIGR00618 617 LLRKLQPEQDLQDVRLHLQQCSQ 639
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
763-1420 |
1.55e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.26 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 763 QLEEKEKLLAteQEDAAVAKSKLRELNKE---MASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQQLQ 839
Cdd:pfam15921 99 ELHEKQKFYL--RQSVIDLQTKLQEMQMErdaMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLR 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 840 G----------KIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELveksEASRQ 909
Cdd:pfam15921 177 KmmlshegvlqEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQL----EALKS 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 910 EEQQRkaLEAKAATFEKQVLQLQASHkesEEALQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSev 989
Cdd:pfam15921 253 ESQNK--IELLLQQHQDRIEQLISEH---EVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLEST-- 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 990 evkskceeLSSLHGQLKEARaenSQLTERIRSIEALLEAGQAQDTQAsHAEANQQQTRLKELESQVSCLEKETSELKEAM 1069
Cdd:pfam15921 326 --------VSQLRSELREAK---RMYEDKIEELEKQLVLANSELTEA-RTERDQFSQESGNLDDQLQKLLADLHKREKEL 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1070 EQQKGKNNDLREKNWKamealalaeraceeklRSLTQAKEESEKQLHLAEAQTKETLLALLPglsisahqnyAEWLQEFK 1149
Cdd:pfam15921 394 SLEKEQNKRLWDRDTG----------------NSITIDHLRRELDDRNMEVQRLEALLKAMK----------SECQGQME 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1150 EKGSELLKKPPTLEPSMDIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKvgAAEEELHKSR 1229
Cdd:pfam15921 448 RQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEAT--NAEITKLRSR 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1230 VTVKHLEdiVEKLKGElessdqvREHTSHLEAELEK---HMAAASAECQNYAKEVAGLRQL----------LLESQSQLD 1296
Cdd:pfam15921 526 VDLKLQE--LQHLKNE-------GDHLRNVQTECEAlklQMAEKDKVIEILRQQIENMTQLvgqhgrtagaMQVEKAQLE 596
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1297 EAKSEAQKQSDELALLK----TQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAgplESSGKEEITQLK 1372
Cdd:pfam15921 597 KEINDRRLELQEFKILKdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNE---VKTSRNELNSLS 673
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1373 ERLEKEKR----LTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQLGKA 1420
Cdd:pfam15921 674 EDYEVLKRnfrnKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHA 725
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
940-1212 |
1.76e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 940 EALQKRLEEVTRELCRAQTSHANLRADAEKAQ---EQQQRVAELHSKLQ---SSEVEVKSKCEELSSLHGQLKEARAENS 1013
Cdd:PRK04863 782 AAREKRIEQLRAEREELAERYATLSFDVQKLQrlhQAFSRFIGSHLAVAfeaDPEAELRQLNRRRVELERALADHESQEQ 861
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1014 QLTERIRSIEALL----------------------EAGQAQDTQASHAEA--NQQQTRLKELESQVSCLEKETSE---LK 1066
Cdd:PRK04863 862 QQRSQLEQAKEGLsalnrllprlnlladetladrvEEIREQLDEAEEAKRfvQQHGNALAQLEPIVSVLQSDPEQfeqLK 941
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1067 EAMEQQKGKNNDLReknwkaMEALALAE------------------------RACEEKLRSLTQAKEESEKQLHLAEAQ- 1121
Cdd:PRK04863 942 QDYQQAQQTQRDAK------QQAFALTEvvqrrahfsyedaaemlaknsdlnEKLRQRLEQAEQERTRAREQLRQAQAQl 1015
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1122 --TKETLLALlpglsISAHQNYAEWLQEFKEkgsELLKKPPTLEPSMDIVLKLREaEETQNSL---QAECDQYRTILAET 1196
Cdd:PRK04863 1016 aqYNQVLASL-----KSSYDAKRQMLQELKQ---ELQDLGVPADSGAEERARARR-DELHARLsanRSRRNQLEKQLTFC 1086
|
330
....*....|....*.
gi 568918950 1197 EGMLKDLQKSVEEEER 1212
Cdd:PRK04863 1087 EAEMDNLTKKLRKLER 1102
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1240-1426 |
1.98e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.06 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1240 EKLKGELESSD-QVREHTSHLEAeLEKhmAAASAECQNYAK-EVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLE 1317
Cdd:PRK11281 83 EQLKQQLAQAPaKLRQAQAELEA-LKD--DNDEETRETLSTlSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPE 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1318 RTEATLEAEQTRRQKLT----------AEFEEAQRTacRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSD--- 1384
Cdd:PRK11281 160 RAQAALYANSQRLQQIRnllkggkvggKALRPSQRV--LLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTAriq 237
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 568918950 1385 -LGRAAIKLQELLktTQEQLTKEKDTVKKLQEQLGKAEDGSSS 1426
Cdd:PRK11281 238 rLEHQLQLLQEAI--NSKRLTLSEKTVQEAQSQDEAARIQANP 278
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
207-347 |
2.14e-04 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 45.89 E-value: 2.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 207 QAKKGEGAQNQGKKGEGAQNQAKKGEGAQ----NQAKKGEGAQNQGKKGEGAQNQAKKGEGGQNQAKKGEGAQNQGkkge 282
Cdd:pfam03276 480 QIRASRGPGPGPSAGEGRGGPANEGRGGPcnagGGNDCGANGQNDGGENIQNGGQELRSQGGQNLRSGGGQGQRWG---- 555
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568918950 283 gaQNQGKKGEGAQNQAKKGEGAQNQAKKGEGAQNQGKKGegaqNQSKKGEGAQNQAKKGEGGQNQ 347
Cdd:pfam03276 556 --EGRGNRENENTENSEQRPREIQAGSGRPGNAGQGVKG----AAGQGGKGAAGRGGRGNGAGDQ 614
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
750-1130 |
2.35e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 750 ATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMASEKAKAAAGEAkvkkQLVAREQEIAAVQARMQASYR 829
Cdd:COG4913 333 RGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRA----EAAALLEALEEELEALEEALA 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 830 DHVKEVQQLQGKIRTLQ---EQLENGPNTQLARLQQensiLRDALNQATS-------------QVESKQNT--------- 884
Cdd:COG4913 409 EAEAALRDLRRELRELEaeiASLERRKSNIPARLLA----LRDALAEALGldeaelpfvgeliEVRPEEERwrgaiervl 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 885 ---------ELAKLRQELSKVNKE-----LV-EKSEASRQEEQQRKA--------LEAKAATFE---KQVLQLQASHK-- 936
Cdd:COG4913 485 ggfaltllvPPEHYAAALRWVNRLhlrgrLVyERVRTGLPDPERPRLdpdslagkLDFKPHPFRawlEAELGRRFDYVcv 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 937 ESEEALQKRLEEVTRElcrAQTSHANLRA--DAEKAQEQQ--------QRVAELHSKLQSSEvevkskcEELSSLHGQLK 1006
Cdd:COG4913 565 DSPEELRRHPRAITRA---GQVKGNGTRHekDDRRRIRSRyvlgfdnrAKLAALEAELAELE-------EELAEAEERLE 634
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1007 EARAENSQLTERIRSIEALLEAGQAQD----TQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREK 1082
Cdd:COG4913 635 ALEAELDALQERREALQRLAEYSWDEIdvasAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGE 714
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 568918950 1083 nwkamealalaERACEEKLRSLTQAKEESEKQLHLAEAQTKETLLALL 1130
Cdd:COG4913 715 -----------IGRLEKELEQAEEELDELQDRLEAAEDLARLELRALL 751
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
814-1074 |
3.10e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.33 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 814 EQEIAAVQARMQASYR---DHVKEVQQLQGKIRTLQEQLengpnTQLARLQQENSIL---------------RDALNQAT 875
Cdd:PRK04863 836 EAELRQLNRRRVELERalaDHESQEQQQRSQLEQAKEGL-----SALNRLLPRLNLLadetladrveeireqLDEAEEAK 910
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 876 SQVESKQNTeLAKLRQELSKVN---------KELVEKSEASRQEEQQR----KALEAKAATFE-KQVLQLQASHKESEEA 941
Cdd:PRK04863 911 RFVQQHGNA-LAQLEPIVSVLQsdpeqfeqlKQDYQQAQQTQRDAKQQafalTEVVQRRAHFSyEDAAEMLAKNSDLNEK 989
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 942 LQKRLEEVTRELCRAQTShanLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSL-----HGQLKEARAENSQLT 1016
Cdd:PRK04863 990 LRQRLEQAEQERTRAREQ---LRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLgvpadSGAEERARARRDELH 1066
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1017 ERIRsiealleagqAQDTQASHAEANQ--QQTRLKELESQVSCLEKETSELKEAMEQQKG 1074
Cdd:PRK04863 1067 ARLS----------ANRSRRNQLEKQLtfCEAEMDNLTKKLRKLERDYHEMREQVVNAKA 1116
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
449-598 |
3.79e-04 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 45.12 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 449 GKKGEGAQNQGKKGEG-AQNQGKKGEGAQNQGKKGE-GAQNQGKKGEGAQNQGkkGEGAQNQGK--KGEGAQNQGKKGEG 524
Cdd:pfam03276 473 GLAARGPQIRASRGPGpGPSAGEGRGGPANEGRGGPcNAGGGNDCGANGQNDG--GENIQNGGQelRSQGGQNLRSGGGQ 550
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568918950 525 PQNQakkgegAQNQGKKGEGAQNQGKKGEGAQNQGKKAEGVQSQSKKGegtqNQGKKGDGNPNQGKKGEGASNQ 598
Cdd:pfam03276 551 GQRW------GEGRGNRENENTENSEQRPREIQAGSGRPGNAGQGVKG----AAGQGGKGAAGRGGRGNGAGDQ 614
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1260-1407 |
4.39e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1260 EAELEKHMAAASAECQNYAKEVaglrqlLLESQSQLDEAKSEAQKQS----DELALLKTQLERTEATLEAEQTRRQKLTA 1335
Cdd:PRK12704 37 EEEAKRILEEAKKEAEAIKKEA------LLEAKEEIHKLRNEFEKELrerrNELQKLEKRLLQKEENLDRKLELLEKREE 110
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1336 EFEEAQRTACRIQEELEKlraagpLESSGKEEITQLKERLEKEKRLTSDLGRaaiklQELLKTTQEQLTKEK 1407
Cdd:PRK12704 111 ELEKKEKELEQKQQELEK------KEEELEELIEEQLQELERISGLTAEEAK-----EILLEKVEEEARHEA 171
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1191-1416 |
6.79e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 6.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1191 TILAETEGMLKD-LQKSVEEEERVWKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAa 1269
Cdd:COG4717 38 TLLAFIRAMLLErLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1270 asaecqnyakevaglRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACRIQE 1349
Cdd:COG4717 117 ---------------ELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEE 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 1350 ELEKLRAAGplessgKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQLTKEKDTVKKLQEQ 1416
Cdd:COG4717 182 LLEQLSLAT------EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
781-1420 |
6.98e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 6.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 781 AKSKLRELNKEMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRdhvkEVQQLQGKIRTLQEQLENgPNTQLARL 860
Cdd:pfam01576 378 AKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESER----QRAELAEKLSKLQSELES-VSSLLNEA 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 861 QQENSILRDALNQATSQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAAtFEKQVLQLQASHKEsee 940
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRN-VERQLSTLQAQLSD--- 528
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 941 aLQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKskcEELSSLHGQLKEARAENSQLTERIR 1020
Cdd:pfam01576 529 -MKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQ---QELDDLLVDLDHQRQLVSNLEKKQK 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1021 SIEALL------EAGQAQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDL---REKNWKAMEALA 1091
Cdd:pfam01576 605 KFDQMLaeekaiSARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLvssKDDVGKNVHELE 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1092 LAERACEEKLRSLTQAKEESEKQLHLAEaQTKETLLALLPGLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLK 1171
Cdd:pfam01576 685 RSKRALEQQVEEMKTQLEELEDELQATE-DAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERK 763
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1172 LREA--------EETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEERVWKAKVGAAEEELHKSRVT---VKHLEDIVE 1240
Cdd:pfam01576 764 QRAQavaakkklELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESekkLKNLEAELL 843
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1241 KLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTE 1320
Cdd:pfam01576 844 QLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLT 923
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1321 ATLEAEQTRRQKLTAEFEEAQRTACRIQEELEKLRAAGPLE-----SSGKEEITQLKERLEKEKRLTSDLGRAAIKLQEL 1395
Cdd:pfam01576 924 TELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKfkssiAALEAKIAQLEEQLEQESRERQAANKLVRRTEKK 1003
|
650 660
....*....|....*....|....*
gi 568918950 1396 LKTTQEQLTKEKDTVKKLQEQLGKA 1420
Cdd:pfam01576 1004 LKEVLLQVEDERRHADQYKDQAEKG 1028
|
|
| Tropomyosin |
pfam00261 |
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 ... |
833-1081 |
7.63e-04 |
|
Tropomyosin; Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organization and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Pssm-ID: 459736 [Multi-domain] Cd Length: 235 Bit Score: 42.71 E-value: 7.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 833 KEVQQLQGKIRTLQEQLEngpnTQLARLQQENSILRDALNQATSQVESKQNTE--LAKLRQELSKVNKELVEKSEASRQE 910
Cdd:pfam00261 1 KKMQQIKEELDEAEERLK----EAMKKLEEAEKRAEKAEAEVAALNRRIQLLEeeLERTEERLAEALEKLEEAEKAADES 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 911 EQQRKALEAKAATFEKQVLQLQASHKES---EEALQKRLEEVTRELcraqtshANLRADAEKAQEqqqRVAELHSKLQSS 987
Cdd:pfam00261 77 ERGRKVLENRALKDEEKMEILEAQLKEAkeiAEEADRKYEEVARKL-------VVVEGDLERAEE---RAELAESKIVEL 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 988 EVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEagqaqdtqashaeanQQQTRLKELESQVSCLEKETSELKE 1067
Cdd:pfam00261 147 EEELKVVGNNLKSLEASEEKASEREDKYEEQIRFLTEKLK---------------EAETRAEFAERSVQKLEKEVDRLED 211
|
250
....*....|....
gi 568918950 1068 AMEQQKGKNNDLRE 1081
Cdd:pfam00261 212 ELEAEKEKYKAISE 225
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
942-1376 |
8.79e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.96 E-value: 8.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 942 LQKRLEEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKlQSSEVEVKskceeLSSLHGQLKEARAENSQLTERIRS 1021
Cdd:pfam05557 7 SKARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESD-RNQELQKR-----IRLLEKREAEAEEALREQAELNRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1022 IEALLEAgqaqdtqaSHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEkL 1101
Cdd:pfam05557 81 KKKYLEA--------LNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASE-A 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1102 RSLTQAKEESEKQLHLAEAQTKETLLALlpglsisahQNYAEWLQEFKEKGSELLKKP---PTLEPSMDIVLKLREAEET 1178
Cdd:pfam05557 152 EQLRQNLEKQQSSLAEAEQRIKELEFEI---------QSQEQDSEIVKNSKSELARIPeleKELERLREHNKHLNENIEN 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1179 QNSLQAECDQYRTILAETEGM---LKDLQ----------------------------------KSVEEEERVWKAKVGAA 1221
Cdd:pfam05557 223 KLLLKEEVEDLKRKLEREEKYreeAATLElekekleqelqswvklaqdtglnlrspedlsrriEQLQQREIVLKEENSSL 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1222 EEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASaecqnyaKEVAGLRQLLLESQSQLDEAKSE 1301
Cdd:pfam05557 303 TSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLT-------KERDGYRAILESYDKELTMSNYS 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1302 AQKQ------SDELALLKTQLERTEATLEA--EQTRRQKLTAEFEEAQRTACRIQEELEKlraagplESSGKEEITQLKE 1373
Cdd:pfam05557 376 PQLLerieeaEDMTQKMQAHNEEMEAQLSVaeEELGGYKQQAQTLERELQALRQQESLAD-------PSYSKEEVDSLRR 448
|
...
gi 568918950 1374 RLE 1376
Cdd:pfam05557 449 KLE 451
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
408-548 |
9.67e-04 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 43.58 E-value: 9.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 408 QTKKGEGPQNQGKKGEAAQKQdkkiEGAQNQGKKPEGTSNQgkKGEGAQNQGkkGEGAQNQGK--KGEGAQNQGKKGEGA 485
Cdd:pfam03276 480 QIRASRGPGPGPSAGEGRGGP----ANEGRGGPCNAGGGND--CGANGQNDG--GENIQNGGQelRSQGGQNLRSGGGQG 551
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 486 Q----NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGegpqNQAKKGEGAQNQGKKGEGAQNQ 548
Cdd:pfam03276 552 QrwgeGRGNRENENTENSEQRPREIQAGSGRPGNAGQGVKG----AAGQGGKGAAGRGGRGNGAGDQ 614
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1231-1416 |
1.13e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1231 TVKHLEDIVEKLKGELESSDQVrehtshLEAELEKH-MAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDEL 1309
Cdd:COG3206 176 ALEFLEEQLPELRKELEEAEAA------LEEFRQKNgLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1310 ALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTAcRIQEELEKLRAAgplessgKEEITQLKERLEKE-KRLTSDLGRA 1388
Cdd:COG3206 250 GSGPDALPELLQSPVIQQLRAQLAELEAELAELSA-RYTPNHPDVIAL-------RAQIAALRAQLQQEaQRILASLEAE 321
|
170 180
....*....|....*....|....*...
gi 568918950 1389 AIKLQELLKTTQEQLTKEKDTVKKLQEQ 1416
Cdd:COG3206 322 LEALQAREASLQAQLAQLEARLAELPEL 349
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
187-497 |
1.54e-03 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 43.28 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 187 SKASSPATSSQGKKGQGAQNQ-AKKGEGAQNQGKKGEGAQNQAKKGEGAQNQAKKGEgaQNQGKKGEGAQNQAKKGEGGQ 265
Cdd:NF012221 1540 SSQQADAVSKHAKQDDAAQNAlADKERAEADRQRLEQEKQQQLAAISGSQSQLESTD--QNALETNGQAQRDAILEESRA 1617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 266 NQAKKGEGAQNQGKKGEGAQNQGKKGEGAQNQAKKG--EGAQNQ---AKKGEGAQNQGKKGEGAQNQSKkgegAQNQAKK 340
Cdd:NF012221 1618 VTKELTTLAQGLDALDSQATYAGESGDQWRNPFAGGllDRVQEQlddAKKISGKQLADAKQRHVDNQQK----VKDAVAK 1693
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 341 GEGGQNQAKKGEgaQNQAKKGEGAQNQAKKGEgvQNQAKKGVEgAQNQGKKGEANQNQAKKGegGQNQTKKGEGPQNQGK 420
Cdd:NF012221 1694 SEAGVAQGEQNQ--ANAEQDIDDAKADAEKRK--DDALAKQNE-AQQAESDANAAANDAQSR--GEQDASAAENKANQAQ 1766
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 421 KGEAAQKQDKkiegaqnqGKKPEgtsNQGKKGEGAQNQGKKGEGAQNQG---KKGEGAQNQGKKGEGAQNQGKKG-EGAQ 496
Cdd:NF012221 1767 ADAKGAKQDE--------SDKPN---RQGAAGSGLSGKAYSVEGVAEPGshiNPDSPAAADGRFSEGLTEQEQEAlEGAT 1835
|
.
gi 568918950 497 N 497
Cdd:NF012221 1836 N 1836
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1235-1331 |
1.58e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 42.26 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1235 LEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAkseaqkqSDELALLKT 1314
Cdd:PRK09039 79 LQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQVSARALAQVELL-------NQQIAALRR 151
|
90
....*....|....*..
gi 568918950 1315 QLERTEATLEAEQTRRQ 1331
Cdd:PRK09039 152 QLAALEAALDASEKRDR 168
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
855-1081 |
1.84e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.81 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 855 TQLARLQQENSILRDALNQATSQVESKQNT------ELAKLRQELSKVNKELvEKSEASRQEEQQRKALEAKAATFEKQV 928
Cdd:pfam05557 283 RRIEQLQQREIVLKEENSSLTSSARQLEKArreleqELAQYLKKIEDLNKKL-KRHKALVRRLQRRVLLLTKERDGYRAI 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 929 LQL---QASHKESEEALQKRLEEVTRELCRAQTSHANLRADAEKAQE----QQQRVAELHSKLQS-----SEVEVKSKCE 996
Cdd:pfam05557 362 LESydkELTMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEelggYKQQAQTLERELQAlrqqeSLADPSYSKE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 997 ELSSLHGQLKEARAENSQLTERIRSIEALLE----------------------AGQAQDTQASHAEANQQQ-TRLKEL-- 1051
Cdd:pfam05557 442 EVDSLRRKLETLELERQRLREQKNELEMELErrclqgdydpkktkvlhlsmnpAAEAYQQRKNQLEKLQAEiERLKRLlk 521
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 568918950 1052 -------------ESQVSCLEKETSELKEAMEQQKGKNNDLRE 1081
Cdd:pfam05557 522 kleddleqvlrlpETTSTMNFKEVLDLRKELESAELKNQRLKE 564
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
883-1406 |
1.99e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.81 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 883 NTELAKLRQELSKVNKELVEKSEASRQEeqqRKALEAKAAT--------------FEKQVLQLQASHKESEEALQKRLEE 948
Cdd:pfam05557 1 RAELIESKARLSQLQNEKKQMELEHKRA---RIELEKKASAlkrqldresdrnqeLQKRIRLLEKREAEAEEALREQAEL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 949 VTRELCRAQTSHANLR---ADAEKAQEQQ----QRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRS 1021
Cdd:pfam05557 78 NRLKKKYLEALNKKLNekeSQLADAREVIsclkNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1022 IEALLEAGQAQDTQASHAE---------------ANQQQTRLKELESQVSCLEKETSELKEAMEqqkgkNNDLREKNWKA 1086
Cdd:pfam05557 158 LEKQQSSLAEAEQRIKELEfeiqsqeqdseivknSKSELARIPELEKELERLREHNKHLNENIE-----NKLLLKEEVED 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1087 MEALALAERACEEKLRSLTQAKEESEKQLHLAEAqtketlLALLPGLSISAHQNYAEWLQEFKEKGSELLKKPPTLEPSm 1166
Cdd:pfam05557 233 LKRKLEREEKYREEAATLELEKEKLEQELQSWVK------LAQDTGLNLRSPEDLSRRIEQLQQREIVLKEENSSLTSS- 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1167 divlkLREAEETQNSLQAECDQYRTILAETEGMLKD-------LQKSV---EEEERVWKAKVGAAEEELHKSRVTVKHLE 1236
Cdd:pfam05557 306 -----ARQLEKARRELEQELAQYLKKIEDLNKKLKRhkalvrrLQRRVlllTKERDGYRAILESYDKELTMSNYSPQLLE 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1237 diveKLKGELESSDQVREHTSHLEAELEKHMAAASA---ECQNYAKEVAGLR-QLLLESQSQLDEAKSEAQKQSDELALL 1312
Cdd:pfam05557 381 ----RIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGykqQAQTLERELQALRqQESLADPSYSKEEVDSLRRKLETLELE 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1313 KTQLERTEATLEAEQTRR-----------------QKLTAEFEEAQrtacriQEELEKLRAagplessgkeEITQLKERL 1375
Cdd:pfam05557 457 RQRLREQKNELEMELERRclqgdydpkktkvlhlsMNPAAEAYQQR------KNQLEKLQA----------EIERLKRLL 520
|
570 580 590
....*....|....*....|....*....|.
gi 568918950 1376 EKEKRLTSDLGRAAIKLQELLKTTQEQLTKE 1406
Cdd:pfam05557 521 KKLEDDLEQVLRLPETTSTMNFKEVLDLRKE 551
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
904-1124 |
2.15e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 904 SEASRQEEQQRKALEAKAATFEKQVLQLQAShkesEEALQKRLEEVTRELCRAQtshanlradaEKAQEQQQRVAELHSK 983
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKE----EKALLKQLAALERRIAALA----------RRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 984 LQSSEVEVKSKCEELSSLHGQLKEaRAENSQLTERIRSIEALLEAGQAQD-----------TQASHAEANQQQTRLKELE 1052
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAE-LLRALYRLGRQPPLALLLSPEDFLDavrrlqylkylAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568918950 1053 SQVSCLEKETSELKEAMEQQKGKNNDL---REKNWKAMEALALAERACEEKLRSLTQAKEESEKQLHLAEAQTKE 1124
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALealKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
297-468 |
2.34e-03 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 42.43 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 297 QAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQSkkgeGAQNQakKGEGGQNQakKGEGAQNQakkgeGAQNQAKKGEGVQN 376
Cdd:pfam03276 480 QIRASRGPGPGPSAGEGRGGPANEGRGGPCNA----GGGND--CGANGQND--GGENIQNG-----GQELRSQGGQNLRS 546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 377 QAKKGVEGAQNQGKKGEANQNQAKkgeggqnQTKKGEGPQNqgkkgeaaqkqdkKIEGAQNQGKKPegtsNQGKKGEGAQ 456
Cdd:pfam03276 547 GGGQGQRWGEGRGNRENENTENSE-------QRPREIQAGS-------------GRPGNAGQGVKG----AAGQGGKGAA 602
|
170
....*....|..
gi 568918950 457 NQGKKGEGAQNQ 468
Cdd:pfam03276 603 GRGGRGNGAGDQ 614
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
835-1095 |
2.73e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.35 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 835 VQQLQGKIRTLQEQLENGPNTQ--------LARLQQEnsiLRDALNQATSQVES-KQNTELAKLRQELSKVNKELVEKSE 905
Cdd:PRK10929 47 VEALQSALNWLEERKGSLERAKqyqqvidnFPKLSAE---LRQQLNNERDEPRSvPPNMSTDALEQEILQVSSQLLEKSR 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 906 ASRQEeqQRKALEAKAATfeKQVLQLQashkesEEAlQKRLEEVTRELcRAQTShanlradAEKAQEQQQRVAelhskLQ 985
Cdd:PRK10929 124 QAQQE--QDRAREISDSL--SQLPQQQ------TEA-RRQLNEIERRL-QTLGT-------PNTPLAQAQLTA-----LQ 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 986 SSEVEVKSKCEELsslhgQLKEARAENSQLTERIRSieALLEAGQAQ---DTQASHAEANQQQTRLKE--LESqVSCLEK 1060
Cdd:PRK10929 180 AESAALKALVDEL-----ELAQLSANNRQELARLRS--ELAKKRSQQldaYLQALRNQLNSQRQREAEraLES-TELLAE 251
|
250 260 270
....*....|....*....|....*....|....*...
gi 568918950 1061 ETSELKEAMEQQKGKNNDL-REKNWKA--MEALALAER 1095
Cdd:PRK10929 252 QSGDLPKSIVAQFKINRELsQALNQQAqrMDLIASQQR 289
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
818-1421 |
2.75e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 818 AAVQARMQASYRDHVKEVQQLQGKIRTLQEQLENGPNT------QLARLQQENSILRDALNQATSQVESKQNTE-----L 886
Cdd:PRK04863 271 AADYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRlvemarELAELNEAESDLEQDYQAASDHLNLVQTALrqqekI 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 887 AKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQ---ASHKESEEALQKR----------LEEVtREL 953
Cdd:PRK04863 351 ERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKsqlADYQQALDVQQTRaiqyqqavqaLERA-KQL 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 954 CR--------AQTSHANLRAdaeKAQEQQQRVAELHSKLQSSE-----------------------------VEVKSKCE 996
Cdd:PRK04863 430 CGlpdltadnAEDWLEEFQA---KEQEATEELLSLEQKLSVAQaahsqfeqayqlvrkiagevsrseawdvaRELLRRLR 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 997 ELSSLHGQLKEARAENSQLTERIRS----IEALLEAGQAQDTQASHAE-----ANQQQTRLKELESQVSCLEKETSELKE 1067
Cdd:PRK04863 507 EQRHLAEQLQQLRMRLSELEQRLRQqqraERLLAEFCKRLGKNLDDEDeleqlQEELEARLESLSESVSEARERRMALRQ 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1068 AMEQQKGKNNDLREKNWKAMEALALAERACE--------------------EKLRSLTQAKEESEKQlhlaeaqtKETLL 1127
Cdd:PRK04863 587 QLEQLQARIQRLAARAPAWLAAQDALARLREqsgeefedsqdvteymqqllERERELTVERDELAAR--------KQALD 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1128 ALLPGLSiSAHQNYAEWLQEFKEK-GSELLKK---PPTLE----------PSMD--IVLKLREAEETQNSL--------- 1182
Cdd:PRK04863 659 EEIERLS-QPGGSEDPRLNALAERfGGVLLSEiydDVSLEdapyfsalygPARHaiVVPDLSDAAEQLAGLedcpedlyl 737
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1183 -QAECDQYRTILAETEGMLKDLqkSVEEEERVW------------KAKVGAAEEELHKSRvtvkhlEDIVEKL-KGELES 1248
Cdd:PRK04863 738 iEGDPDSFDDSVFSVEELEKAV--VVKIADRQWrysrfpevplfgRAAREKRIEQLRAER------EELAERYaTLSFDV 809
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1249 SDQVREHtSHLEAELEKHMAAASAEcqNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATL----- 1323
Cdd:PRK04863 810 QKLQRLH-QAFSRFIGSHLAVAFEA--DPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLprlnl 886
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1324 --------EAEQTRRQklTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQEL 1395
Cdd:PRK04863 887 ladetladRVEEIREQ--LDEAEEAKRFVQQHGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEV 964
|
730 740 750
....*....|....*....|....*....|....
gi 568918950 1396 LKT--------TQEQLTKEKDTVKKLQEQLGKAE 1421
Cdd:PRK04863 965 VQRrahfsyedAAEMLAKNSDLNEKLRQRLEQAE 998
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
887-1020 |
3.14e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.99 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 887 AKLRQELSKVNKELVEKSEASRQEEQQRKALEakaatfekqvlqlqashKESEEALQKRLEEVTRELcraqtshANLRAD 966
Cdd:COG0542 400 ARVRMEIDSKPEELDELERRLEQLEIEKEALK-----------------KEQDEASFERLAELRDEL-------AELEEE 455
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 568918950 967 AEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIR 1020
Cdd:COG0542 456 LEALKARWEAEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAELAPLLR 509
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
885-1323 |
3.23e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 885 ELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAkaatfekQVLQLQASHKES----EEALQKRLEEVTRELCRAQtsh 960
Cdd:PRK04863 838 ELRQLNRRRVELERALADHESQEQQQRSQLEQAKE-------GLSALNRLLPRLnllaDETLADRVEEIREQLDEAE--- 907
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 961 anlraDAEKAQEQQQRVAE----LHSKLQSSEvevkskcEELSSLHGQLKEARAENSQLTERIRSIealleagqaqdtqa 1036
Cdd:PRK04863 908 -----EAKRFVQQHGNALAqlepIVSVLQSDP-------EQFEQLKQDYQQAQQTQRDAKQQAFAL-------------- 961
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1037 shAEANQQQTRLKELESQvSCLEKEtSELKEAMEQQkgknndlreknwkameaLALAERACEEKLRSLTQAKEESekqlh 1116
Cdd:PRK04863 962 --TEVVQRRAHFSYEDAA-EMLAKN-SDLNEKLRQR-----------------LEQAEQERTRAREQLRQAQAQL----- 1015
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1117 laeAQTKETLLALlpglsISAHQNYAEWLQEFKEkgsELLKKPPTLEPSMDIVLKLREaEETQNSL---QAECDQYRTIL 1193
Cdd:PRK04863 1016 ---AQYNQVLASL-----KSSYDAKRQMLQELKQ---ELQDLGVPADSGAEERARARR-DELHARLsanRSRRNQLEKQL 1083
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1194 AETEGMLKDLQKSVEEEER--------VWKAKVG-----------AAEEELHKSRVT---VKHLEDIVEKLKGELESSDQ 1251
Cdd:PRK04863 1084 TFCEAEMDNLTKKLRKLERdyhemreqVVNAKAGwcavlrlvkdnGVERRLHRRELAylsADELRSMSDKALGALRLAVA 1163
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568918950 1252 VREHTSHLEAELEKHmAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATL 1323
Cdd:PRK04863 1164 DNEHLRDVLRLSEDP-KRPERKVQFYIAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKL 1234
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
813-1414 |
3.33e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 813 REQEIAAVQARMQASYRDHVKEVQQLQGK----IRTLQEQLENGPNTqlarlqqensilRDALNQATSQVESkqntELAK 888
Cdd:pfam01576 325 REQEVTELKKALEEETRSHEAQLQEMRQKhtqaLEELTEQLEQAKRN------------KANLEKAKQALES----ENAE 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 889 LRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQashkESEEALQKRLEEVTRELCRAQTSHANLRADAE 968
Cdd:pfam01576 389 LQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELA----EKLSKLQSELESVSSLLNEAEGKNIKLSKDVS 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 969 KAQEQQQRVAELHSKLQSSEVEVKSKC----EELSSLHGQLKEARAENSQLTERIRSIEA-LLEAGQAQDTQASHAEANQ 1043
Cdd:pfam01576 465 SLESQLQDTQELLQEETRQKLNLSTRLrqleDERNSLQEQLEEEEEAKRNVERQLSTLQAqLSDMKKKLEEDAGTLEALE 544
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1044 QQTR--LKELESQVSCLEKETSE-----------------LKEAMEQQKGKNNDLREKNWKAMEALAlaeracEEKLRSL 1104
Cdd:pfam01576 545 EGKKrlQRELEALTQQLEEKAAAydklektknrlqqelddLLVDLDHQRQLVSNLEKKQKKFDQMLA------EEKAISA 618
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1105 TQAKEESEKQlhlAEAQTKETllallPGLSIS-AHQNYAEWLQEFKEKGSELLKKPPTLEPSMDIVLK-LREAEETQNSL 1182
Cdd:pfam01576 619 RYAEERDRAE---AEAREKET-----RALSLArALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKnVHELERSKRAL 690
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1183 QAECDQYRTILAETEGMLK-----------DLQKSVEEEERVWKAKVGAAEEelhKSRVTVKHLEDIVEKLKGELESSDQ 1251
Cdd:pfam01576 691 EQQVEEMKTQLEELEDELQatedaklrlevNMQALKAQFERDLQARDEQGEE---KRRQLVKQVRELEAELEDERKQRAQ 767
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1252 VREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQL---LLESQSQLDEAKSeaqkQSDELALLKTQLERTEATLEAEQT 1328
Cdd:pfam01576 768 AVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLqaqMKDLQRELEEARA----SRDEILAQSKESEKKLKNLEAELL 843
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1329 RRQKLTAEFEEAQRTACRIQEELEKLRAAGPLESSGKEE--------ITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQ 1400
Cdd:pfam01576 844 QLQEDLAASERARRQAQQERDELADEIASGASGKSALQDekrrlearIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLT 923
|
650
....*....|....
gi 568918950 1401 EQLTKEKDTVKKLQ 1414
Cdd:pfam01576 924 TELAAERSTSQKSE 937
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
876-965 |
3.54e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.86 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 876 SQVESKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHkeseEALQKRLEEVTRELcR 955
Cdd:PRK11448 141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQL----EQLQEKAAETSQER-K 215
|
90
....*....|
gi 568918950 956 AQTSHANLRA 965
Cdd:PRK11448 216 QKRKEITDQA 225
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
881-1421 |
3.90e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 881 KQNTELAKLRQELSKVNKELVEK--SEASRQEEQQRKALEAKAATFEKQVLQLqashKESEEALQKRLEEVTRElcraQT 958
Cdd:pfam15921 56 KYEVELDSPRKIIAYPGKEHIERvlEEYSHQVKDLQRRLNESNELHEKQKFYL----RQSVIDLQTKLQEMQME----RD 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 959 SHANLRADAEKAQEqqqrvaELHSKLQSSEVEVKS-KC------EELSSLHGQLKEARAENSQLTERIRSIEALLEAGQA 1031
Cdd:pfam15921 128 AMADIRRRESQSQE------DLRNQLQNTVHELEAaKClkedmlEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1032 QDTqasHAEANQQQTRLKELESQVScleKETSELKEAMEQQKGKNNDLREKnwkaMEALalaeraceeklrsltqaKEES 1111
Cdd:pfam15921 202 KKI---YEHDSMSTMHFRSLGSAIS---KILRELDTEISYLKGRIFPVEDQ----LEAL-----------------KSES 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1112 EKQLHLAEAQTKETLLALlpglsISAHQNYAEWLQEfkeKGSELLKKPPTLEPSMDIVlklREAEETQNSLqaecdqYRT 1191
Cdd:pfam15921 255 QNKIELLLQQHQDRIEQL-----ISEHEVEITGLTE---KASSARSQANSIQSQLEII---QEQARNQNSM------YMR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1192 ILAETEGMLKDLQKSVEEEERVWKAKVgaaeEELHKSRVTVKhledivEKLKGELESSDQVREHTSHLEAELEKHMAAAS 1271
Cdd:pfam15921 318 QLSDLESTVSQLRSELREAKRMYEDKI----EELEKQLVLAN------SELTEARTERDQFSQESGNLDDQLQKLLADLH 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1272 AECQNYAKEVAGLRQL----------LLESQSQLDEAKSEAQKQSDELALLKT----QLERTEATLEAEQTRRQKLTAEF 1337
Cdd:pfam15921 388 KREKELSLEKEQNKRLwdrdtgnsitIDHLRRELDDRNMEVQRLEALLKAMKSecqgQMERQMAAIQGKNESLEKVSSLT 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1338 EEAQRTACRIQEELEKLRAAGPLESSGKEEITQLKERLEKEKR--------LTSDLGRAAIKLQEL--LKTTQEQLTKEK 1407
Cdd:pfam15921 468 AQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERaieatnaeITKLRSRVDLKLQELqhLKNEGDHLRNVQ 547
|
570
....*....|....
gi 568918950 1408 DTVKKLQEQLGKAE 1421
Cdd:pfam15921 548 TECEALKLQMAEKD 561
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
880-1417 |
4.20e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 880 SKQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTR---ELCRA 956
Cdd:TIGR04523 120 NKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKiknKLLKL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 957 QTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLKEARAENSQLTERIRSIEALLEAGQAQDTQA 1036
Cdd:TIGR04523 200 ELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQN 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1037 ShAEANQQQTRLKELESQVSCLEKE-----TSELKEAMEQQKGKNNDLREKNWKAMEALALAERACEEKLRSLTQAK-EE 1110
Cdd:TIGR04523 280 N-KKIKELEKQLNQLKSEISDLNNQkeqdwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSEsEN 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1111 SEKQLHLAEAQTKETLLallpglsISAHQNYAEWLQEFKEKGSELLKKpptlepsmdIVLKLREAEETQNSLQAECDQYR 1190
Cdd:TIGR04523 359 SEKQRELEEKQNEIEKL-------KKENQSYKQEIKNLESQINDLESK---------IQNQEKLNQQKDEQIKKLQQEKE 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1191 TILAETEGMLKDLQKSVEEEERVwKAKVGAAEEELHKSRVTVKHLEDIVEKLKGELESSDQVREHTSHLEAELEKHMAAA 1270
Cdd:TIGR04523 423 LLEKEIERLKETIIKNNSEIKDL-TNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1271 SAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLtaefeeaqrtacRIQEE 1350
Cdd:TIGR04523 502 NEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEID------------EKNKE 569
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568918950 1351 LEKLRAAGPLESSGKEEITQLKERLEKEKrltsdlgRAAIKLQELLKTTQEQLTKEKDTVKKLQEQL 1417
Cdd:TIGR04523 570 IEELKQTQKSLKKKQEEKQELIDQKEKEK-------KDLIKEIEEKEKKISSLEKELEKAKKENEKL 629
|
|
| Innate_immun |
pfam12782 |
Invertebrate innate immunity transcript family; The immune response of the purple sea urchin ... |
224-483 |
4.42e-03 |
|
Invertebrate innate immunity transcript family; The immune response of the purple sea urchin appears to be more complex than previously believed in that it uses immune-related gene families homologous to vertebrate Toll-like and NOD/NALP-like receptor families as well as C-type lectins and a rudimentary complement system. In addition, the species also produces this unusual family of mRNAs, also known as 185/333, which is strongly upregulated in response to pathogen challenge.
Pssm-ID: 432781 [Multi-domain] Cd Length: 291 Bit Score: 40.91 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 224 AQNQAKKGEGAQNQAKKGEGAQnqGKKGEGAQNQAKKGEGGQNQAKKGEGA-----QNQGKKGEGAQNQGKKGEGAQNQA 298
Cdd:pfam12782 21 AQRDFNERRGKENDTERGQGGF--GGRPGGMQMGSPRQDGGQMGGRRFDGPesgapQMEGRRQNGGPMGGRRFDGPRFGG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 299 KKGEGAQNQAKKGEGaqnqGKKGEGAQNQSkkgegAQNQAKKGEGGQNQAKKGEGAQNQAKKGEGAQNQAKKGEGVQNQA 378
Cdd:pfam12782 99 SRPDGAGGRPFFGQG----GRRGDGEEETD-----AAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNES 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 379 --KKGVEGAQNQGKKGEANQNQAKKGEGGQNQTkkGEGPQNQGKKGEAAQKQDKKIEGAQNQ----GKKPEGTSNQGKKG 452
Cdd:pfam12782 170 sdEDGRPHPRHHGRHHQHHHRNHTEGHQGHNET--GDHPHRHHNKTGDGDQDRPMFEMRPFRfnpfGRKPFGDRPFGRRN 247
|
250 260 270
....*....|....*....|....*....|.
gi 568918950 453 EGAQNQGKKGEGAQNQGKKGEGAQNQGKKGE 483
Cdd:pfam12782 248 GTEEGSPRRDGQRRPYGNRGRWGENESEEKE 278
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
868-1339 |
6.00e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 41.25 E-value: 6.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 868 RDALNQATSQVESkQNTELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESEEALQKRLE 947
Cdd:pfam05483 267 RDKANQLEEKTKL-QDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKA 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 948 EVTRELCRAQTSHANLRadaEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHG----------QLKEARAENSQLTE 1017
Cdd:pfam05483 346 AHSFVVTEFEATTCSLE---ELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKfknnkeveleELKKILAEDEKLLD 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1018 RIRSIEALLEAGQAQDT------QASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNwkamEALA 1091
Cdd:pfam05483 423 EKKQFEKIAEELKGKEQelifllQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHC----DKLL 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1092 LAERACEEKLRSLTQAKEESEKQLHLAEAQTKETL--LALLPGLSISAHQNYAEWLQEFKEKGSEL-LKKPPTLEPSMDI 1168
Cdd:pfam05483 499 LENKELTQEASDMTLELKKHQEDIINCKKQEERMLkqIENLEEKEMNLRDELESVREEFIQKGDEVkCKLDKSEENARSI 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1169 VLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQ--------KSVEEEER--VWKAKVGAAEEELHKSRVTVKHLEDI 1238
Cdd:pfam05483 579 EYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHqenkalkkKGSAENKQlnAYEIKVNKLELELASAKQKFEEIIDN 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1239 V-----------EKLKGELESSDQVREHTSHLEAELEKHMAAASAE-CQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQS 1306
Cdd:pfam05483 659 YqkeiedkkiseEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEmVALMEKHKHQYDKIIEERDSELGLYKNKEQEQS 738
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 568918950 1307 D-------ELALLKTQLERTEATLEAEQTRRQKLTAEFEE 1339
Cdd:pfam05483 739 SakaaleiELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
762-990 |
6.32e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 762 RQLEEKEKLLATEQEDAAVAKSKLRELNK---EMASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKEVQQL 838
Cdd:pfam17380 354 RQEERKRELERIRQEEIAMEISRMRELERlqmERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEAR 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 839 QGKIRTLQEQ----LENGPNTQLARLQQENSILRDALNQATSQVESKQNTELAKLRQELSK--VNKELVEKSEASRQEEQ 912
Cdd:pfam17380 434 QREVRRLEEErareMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkiLEKELEERKQAMIEEER 513
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568918950 913 QRKALEAKAATFEKQVLQLQASHK-ESEEALQKRLEEVTRelcraqtshanlradaekAQEQQQRVAELHSKLQSSEVE 990
Cdd:pfam17380 514 KRKLLEKEMEERQKAIYEEERRREaEEERRKQQEMEERRR------------------IQEQMRKATEERSRLEAMERE 574
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
400-593 |
7.42e-03 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 40.66 E-value: 7.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 400 KKGEGGQNQTKKGEGPQN-QGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQnQGKKGEgAQNQGKKGEGAQNQ 478
Cdd:NF038329 118 EKGEPGPAGPAGPAGEQGpRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGP-AGKDGE-AGAKGPAGEKGPQG 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 479 GKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGE----GPQNQAKKGEGAQNQGKKGEGAQN--QGKKG 552
Cdd:NF038329 196 PRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDpgptGEDGPQGPDGPAGKDGPRGDRGEAgpDGPDG 275
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 568918950 553 EGAQNQGKKAEGVQSQSKKGEGTQNQGKKG----DGNPnqGKKGE 593
Cdd:NF038329 276 KDGERGPVGPAGKDGQNGKDGLPGKDGKDGqngkDGLP--GKDGK 318
|
|
| Innate_immun |
pfam12782 |
Invertebrate innate immunity transcript family; The immune response of the purple sea urchin ... |
204-408 |
8.56e-03 |
|
Invertebrate innate immunity transcript family; The immune response of the purple sea urchin appears to be more complex than previously believed in that it uses immune-related gene families homologous to vertebrate Toll-like and NOD/NALP-like receptor families as well as C-type lectins and a rudimentary complement system. In addition, the species also produces this unusual family of mRNAs, also known as 185/333, which is strongly upregulated in response to pathogen challenge.
Pssm-ID: 432781 [Multi-domain] Cd Length: 291 Bit Score: 39.75 E-value: 8.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 204 AQNQAKKGEGAQNQGKKGEGAQnqAKKGEGAQNQAKKGEGAQNQGKKGEGAQNQAKKGEGgqnqaKKGEGAQNQGKKGEG 283
Cdd:pfam12782 21 AQRDFNERRGKENDTERGQGGF--GGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEG-----RRQNGGPMGGRRFDG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 284 AQNQGKKGEGAQNQAKKGEGA-QNQAKKGEGAQNQGKKGEGAQNQSKKGEGAQNQAKKGEGGQNQAKKGEGAQNQAKKGE 362
Cdd:pfam12782 94 PRFGGSRPDGAGGRPFFGQGGrRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDED 173
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 568918950 363 GAQNQAKKGEGVQNQAKKGVEGAQNQGKKGE-ANQNQAKKGEGGQNQ 408
Cdd:pfam12782 174 GRPHPRHHGRHHQHHHRNHTEGHQGHNETGDhPHRHHNKTGDGDQDR 220
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1261-1422 |
8.81e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1261 AELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEA 1340
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1341 QRTACR---------------IQEELEKLRAAGPLESSGKEEITQLKERLEKEKRLTSDLGRAAIKLQELLKTTQEQ--- 1402
Cdd:COG4942 110 LRALYRlgrqpplalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEEraa 189
|
170 180
....*....|....*....|
gi 568918950 1403 LTKEKDTVKKLQEQLGKAED 1422
Cdd:COG4942 190 LEALKAERQKLLARLEKELA 209
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
757-955 |
8.92e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 757 VAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEM--ASEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYRDHVKE 834
Cdd:COG4913 687 LAALEEQLEELEAELEELEEELDELKGEIGRLEKELeqAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERE 766
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 835 V-QQLQGKIRTLQEQLENGpNTQLARLQQE-NSILRDALNQATSQVESkqNTELAKLRQELskvnkelveksEASRQEEQ 912
Cdd:COG4913 767 LrENLEERIDALRARLNRA-EEELERAMRAfNREWPAETADLDADLES--LPEYLALLDRL-----------EEDGLPEY 832
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 568918950 913 QRKALEAKAATFEKQVLQLQASHKESEEALQKRLEEVTRELCR 955
Cdd:COG4913 833 EERFKELLNENSIEFVADLLSKLRRAIREIKERIDPLNDSLKR 875
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
854-1325 |
9.32e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.39 E-value: 9.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 854 NTQLARLQQENSILRDALNQATSQVESKQN------TELAKLRQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQ 927
Cdd:TIGR04523 217 ESQISELKKQNNQLKDNIEKKQQEINEKTTeisntqTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 928 VLQLQashKESEEALQKRL-EEVTRELCRAQTSHANLRADAEKAQEQQQRVAELHSKLQSSEVEVKSKCEELSSLHGQLK 1006
Cdd:TIGR04523 297 ISDLN---NQKEQDWNKELkSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1007 EARAENSQLTERIRSIEALLEAGQaQDTQASHAEANQQQTRLKELESQVSCLEKETSELKEAMEQQKGKNNDLREKNWka 1086
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLE-SKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDS-- 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1087 mealalaerACEEKLRSLTQAKEESEKQLHLAEAQTKetllallpglsiSAHQNYAEWLQEFKEKGSELLKkppTLEPSM 1166
Cdd:TIGR04523 451 ---------VKELIIKNLDNTRESLETQLKVLSRSIN------------KIKQNLEQKQKELKSKEKELKK---LNEEKK 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1167 DIVLKLREAEETQNSLQAECDQYRTILAETEGMLKDLQKSVEEEervwkakvgaaeeelhKSRVTVKHLEDIVEKLKGEL 1246
Cdd:TIGR04523 507 ELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD----------------DFELKKENLEKEIDEKNKEI 570
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568918950 1247 ESSDQVREHTSHLEAELEKHMAAASAECQNYAKEVAGLRQLLLESQSQLDEAKSEAQKQSDELALLKTQLERTEATLEA 1325
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
890-1125 |
9.64e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 40.06 E-value: 9.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 890 RQELSKVNKELVEKSEASRQEEQQRKALEAKAATFEKQVLQLQASHKESeealQKRLEEVTRELCRAQTSHANLradaEK 969
Cdd:PRK11637 46 RDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRET----QNTLNQLNKQIDELNASIAKL----EQ 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 970 AQEQQQRV--AEL--------HSKLQ---SSEVEVKSkcEELSSLHGQLKEARAEN----SQLTERIRSIEALLEAGQAQ 1032
Cdd:PRK11637 118 QQAAQERLlaAQLdaafrqgeHTGLQlilSGEESQRG--ERILAYFGYLNQARQETiaelKQTREELAAQKAELEEKQSQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1033 DTQASHAEANQQQTrlkeLESQVSCLEKETSELKEAMEQQKGKNNDLREKNWKAMEALALAERacEEKLRSLTQAKEESE 1112
Cdd:PRK11637 196 QKTLLYEQQAQQQK----LEQARNERKKTLTGLESSLQKDQQQLSELRANESRLRDSIARAER--EAKARAEREAREAAR 269
|
250
....*....|...
gi 568918950 1113 KQLHLAEAQTKET 1125
Cdd:PRK11637 270 VRDKQKQAKRKGS 282
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
1056-1346 |
9.81e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 40.40 E-value: 9.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1056 SCLEKETSELKEAME-----QQKGKNNDLREKNWKAMEALALAERAcEEKLRSLTQAKEESEKQLhLAEAQTKETLLALL 1130
Cdd:pfam05667 207 SLLERNAAELAAAQEweeewNSQGLASRLTPEEYRKRKRTKLLKRI-AEQLRSAALAGTEATSGA-SRSAQDLAELLSSF 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1131 PGLSISAHQ-------NYAEWLQEFKEKGSELLKKPPTLEPSMDIVLKlREAEetQNSLQAECDQYRTILAETEGMLKDL 1203
Cdd:pfam05667 285 SGSSTTDTGltkgsrfTHTEKLQFTNEAPAATSSPPTKVETEEELQQQ-REEE--LEELQEQLEDLESSIQELEKEIKKL 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568918950 1204 QKS---VEEEERVWKAKVGAAEEELHKSRVTVKHLEDI---VEKLKGELESSDQVREHtshLEAELEKHMAAASAEcqny 1277
Cdd:pfam05667 362 ESSikqVEEELEELKEQNEELEKQYKVKKKTLDLLPDAeenIAKLQALVDASAQRLVE---LAGQWEKHRVPLIEE---- 434
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568918950 1278 akevagLRQLllesQSQLDEAKSEAQKQSDELALLKTQLERTEATLEAEQTRRQKLTAEFEEAQRTACR 1346
Cdd:pfam05667 435 ------YRAL----KEAKSNKEDESQRKLEEIKELREKIKEVAEEAKQKEELYKQLVAEYERLPKDVSR 493
|
|
|