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Conserved domains on  [gi|568937826|ref|XP_006504373|]
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glycosyltransferase 1 domain-containing protein 1 isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2007 super family cl09659
Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic ...
 13-62 7.92e-04

Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic signal transducing proteins of Pii-type.


The actual alignment was detected with superfamily member pfam09413:

Pssm-ID: 471910  Cd Length: 66  Bit Score: 37.20  E-value: 7.92e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 568937826   13 TGNAVTAGRLRDHLEAAGHMCVLRDAFD-------FESPSEIanLIMDENLEAALAL 62
Cdd:pfam09413   7 TNDPVLASMIKALLEEAGIPCVIKDEFMsilegslGELPVRI--LVAEDDLERARRI 61
PRK15025 super family cl00900
ureidoglycolate dehydrogenase; Provisional
 227-283 7.03e-03

ureidoglycolate dehydrogenase; Provisional


The actual alignment was detected with superfamily member PRK10098:

Pssm-ID: 469982  Cd Length: 350  Bit Score: 37.32  E-value: 7.03e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568937826 227 CAGQQLRLRGHVSCHL---------GGNGFGSSRASQehPWELGCGRARSHGTAVFKPSGVHSVGK 283
Cdd:PRK10098  60 WSQGHLQLNHHAKIVKdagavltldGDRGFGQVVAHE--AMALGIERARQHGICAVALRNSHHIGR 123
 
Name Accession Description Interval E-value
DUF2007 pfam09413
Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic ...
 13-62 7.92e-04

Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic signal transducing proteins of Pii-type.


Pssm-ID: 430595  Cd Length: 66  Bit Score: 37.20  E-value: 7.92e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 568937826   13 TGNAVTAGRLRDHLEAAGHMCVLRDAFD-------FESPSEIanLIMDENLEAALAL 62
Cdd:pfam09413   7 TNDPVLASMIKALLEEAGIPCVIKDEFMsilegslGELPVRI--LVAEDDLERARRI 61
PRK10098 PRK10098
putative dehydrogenase; Provisional
 227-283 7.03e-03

putative dehydrogenase; Provisional


Pssm-ID: 182240  Cd Length: 350  Bit Score: 37.32  E-value: 7.03e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568937826 227 CAGQQLRLRGHVSCHL---------GGNGFGSSRASQehPWELGCGRARSHGTAVFKPSGVHSVGK 283
Cdd:PRK10098  60 WSQGHLQLNHHAKIVKdagavltldGDRGFGQVVAHE--AMALGIERARQHGICAVALRNSHHIGR 123
 
Name Accession Description Interval E-value
DUF2007 pfam09413
Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic ...
 13-62 7.92e-04

Putative prokaryotic signal transducing protein; This is a family of putative prokaryotic signal transducing proteins of Pii-type.


Pssm-ID: 430595  Cd Length: 66  Bit Score: 37.20  E-value: 7.92e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 568937826   13 TGNAVTAGRLRDHLEAAGHMCVLRDAFD-------FESPSEIanLIMDENLEAALAL 62
Cdd:pfam09413   7 TNDPVLASMIKALLEEAGIPCVIKDEFMsilegslGELPVRI--LVAEDDLERARRI 61
PRK10098 PRK10098
putative dehydrogenase; Provisional
 227-283 7.03e-03

putative dehydrogenase; Provisional


Pssm-ID: 182240  Cd Length: 350  Bit Score: 37.32  E-value: 7.03e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568937826 227 CAGQQLRLRGHVSCHL---------GGNGFGSSRASQehPWELGCGRARSHGTAVFKPSGVHSVGK 283
Cdd:PRK10098  60 WSQGHLQLNHHAKIVKdagavltldGDRGFGQVVAHE--AMALGIERARQHGICAVALRNSHHIGR 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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