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Conserved domains on  [gi|1907075718|ref|XP_006513862|]
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uncharacterized protein C22orf15 homolog isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Il2rg super family cl24449
Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. ...
 34-124 2.30e-26

Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. Proteins in this family are typically between 137 and 197 amino acids in length.


The actual alignment was detected with superfamily member pfam15874:

Pssm-ID: 464916  Cd Length: 93  Bit Score: 95.84  E-value: 2.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907075718  34 FGAGCRELVNPWCNLLNFTVHLKQKARVPPGGTIALLAEDGHLVKLEEETTQaPSMACSLIQEQVTYVLVQVIKGK---D 110
Cdd:pfam15874   1 YGDNQQFLVNPNCRVVLLLYHIKKKCGLPKEAIIDLCDETGKLKFLSLKPPE-QDYASKLLTARGTYILVKVERGPtreD 79

                          90
                  ....*....|....
gi 1907075718 111 GTPTHYESLLDNLD 124
Cdd:pfam15874  80 NSYPVYVPLLNNPE 93
 
Name Accession Description Interval E-value
Il2rg pfam15874
Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. ...
 34-124 2.30e-26

Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. Proteins in this family are typically between 137 and 197 amino acids in length.


Pssm-ID: 464916  Cd Length: 93  Bit Score: 95.84  E-value: 2.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907075718  34 FGAGCRELVNPWCNLLNFTVHLKQKARVPPGGTIALLAEDGHLVKLEEETTQaPSMACSLIQEQVTYVLVQVIKGK---D 110
Cdd:pfam15874   1 YGDNQQFLVNPNCRVVLLLYHIKKKCGLPKEAIIDLCDETGKLKFLSLKPPE-QDYASKLLTARGTYILVKVERGPtreD 79

                          90
                  ....*....|....
gi 1907075718 111 GTPTHYESLLDNLD 124
Cdd:pfam15874  80 NSYPVYVPLLNNPE 93
 
Name Accession Description Interval E-value
Il2rg pfam15874
Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. ...
 34-124 2.30e-26

Putative Interleukin 2 receptor, gamma chain; This family of proteins is found in eukaryotes. Proteins in this family are typically between 137 and 197 amino acids in length.


Pssm-ID: 464916  Cd Length: 93  Bit Score: 95.84  E-value: 2.30e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907075718  34 FGAGCRELVNPWCNLLNFTVHLKQKARVPPGGTIALLAEDGHLVKLEEETTQaPSMACSLIQEQVTYVLVQVIKGK---D 110
Cdd:pfam15874   1 YGDNQQFLVNPNCRVVLLLYHIKKKCGLPKEAIIDLCDETGKLKFLSLKPPE-QDYASKLLTARGTYILVKVERGPtreD 79

                          90
                  ....*....|....
gi 1907075718 111 GTPTHYESLLDNLD 124
Cdd:pfam15874  80 NSYPVYVPLLNNPE 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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