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Conserved domains on  [gi|568996474|ref|XP_006522739|]
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testis-specific expressed protein 55 isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5582 super family cl39312
Family of unknown function (DUF5582); This is a family of unknown function found in chordata.
 230-346 6.38e-42

Family of unknown function (DUF5582); This is a family of unknown function found in chordata.


The actual alignment was detected with superfamily member pfam17819:

Pssm-ID: 465519  Cd Length: 146  Bit Score: 143.43  E-value: 6.38e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568996474  230 CTFEDSEAEL-PSKVSTTEETESATTIQAYNTQDTELTTS------TSHEKLPSITTKVYYSSSPEKIQTTEYTSDTTPV 302
Cdd:pfam17819   1 CKFEDSQTDLsPSKVSTETETESPTTLQAYNPFDTRLTNNfpakdqASSEKFPSISSKVDYITSQEKIQATEITPDDFSE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 568996474  303 FDQGRSSQRSSQSSRWRFPPIVFEDPYHVALRYVEKHNILHIFQ 346
Cdd:pfam17819  81 FEQERSSQEYKQTYRGRFPPIVYEDPYQVSLRYMEKHHILQIFQ 124
 
Name Accession Description Interval E-value
DUF5582 pfam17819
Family of unknown function (DUF5582); This is a family of unknown function found in chordata.
 230-346 6.38e-42

Family of unknown function (DUF5582); This is a family of unknown function found in chordata.


Pssm-ID: 465519  Cd Length: 146  Bit Score: 143.43  E-value: 6.38e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568996474  230 CTFEDSEAEL-PSKVSTTEETESATTIQAYNTQDTELTTS------TSHEKLPSITTKVYYSSSPEKIQTTEYTSDTTPV 302
Cdd:pfam17819   1 CKFEDSQTDLsPSKVSTETETESPTTLQAYNPFDTRLTNNfpakdqASSEKFPSISSKVDYITSQEKIQATEITPDDFSE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 568996474  303 FDQGRSSQRSSQSSRWRFPPIVFEDPYHVALRYVEKHNILHIFQ 346
Cdd:pfam17819  81 FEQERSSQEYKQTYRGRFPPIVYEDPYQVSLRYMEKHHILQIFQ 124
DD_TEX55 cd22975
dimerization/docking (D/D) domain found in testis-specific expressed protein 55 (TEX55) and ...
 326-356 1.08e-06

dimerization/docking (D/D) domain found in testis-specific expressed protein 55 (TEX55) and similar proteins; TEX55, also called testis-specific conserved cAMP-dependent type II PK-anchoring protein (TSCPA), is a putative A-kinase anchoring protein (AKAP) that is dispensable for male fertility. It contains a C-terminal domain that shows high sequence similarity to the dimerization/docking (D/D) domains of regulatory subunit of cAMP-dependent protein kinase (PKA) and protein DPY-30/SDC1.


Pssm-ID: 438544  Cd Length: 50  Bit Score: 44.86  E-value: 1.08e-06
                         10        20        30
                 ....*....|....*....|....*....|...
gi 568996474 326 EDPYHVALRYVEKHNILHIFQ--VQNMIKHRDE 356
Cdd:cd22975    1 EDPYEKAVKYLEKHNILQLFQelTAGLVYERPD 33
 
Name Accession Description Interval E-value
DUF5582 pfam17819
Family of unknown function (DUF5582); This is a family of unknown function found in chordata.
 230-346 6.38e-42

Family of unknown function (DUF5582); This is a family of unknown function found in chordata.


Pssm-ID: 465519  Cd Length: 146  Bit Score: 143.43  E-value: 6.38e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568996474  230 CTFEDSEAEL-PSKVSTTEETESATTIQAYNTQDTELTTS------TSHEKLPSITTKVYYSSSPEKIQTTEYTSDTTPV 302
Cdd:pfam17819   1 CKFEDSQTDLsPSKVSTETETESPTTLQAYNPFDTRLTNNfpakdqASSEKFPSISSKVDYITSQEKIQATEITPDDFSE 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 568996474  303 FDQGRSSQRSSQSSRWRFPPIVFEDPYHVALRYVEKHNILHIFQ 346
Cdd:pfam17819  81 FEQERSSQEYKQTYRGRFPPIVYEDPYQVSLRYMEKHHILQIFQ 124
DD_TEX55 cd22975
dimerization/docking (D/D) domain found in testis-specific expressed protein 55 (TEX55) and ...
 326-356 1.08e-06

dimerization/docking (D/D) domain found in testis-specific expressed protein 55 (TEX55) and similar proteins; TEX55, also called testis-specific conserved cAMP-dependent type II PK-anchoring protein (TSCPA), is a putative A-kinase anchoring protein (AKAP) that is dispensable for male fertility. It contains a C-terminal domain that shows high sequence similarity to the dimerization/docking (D/D) domains of regulatory subunit of cAMP-dependent protein kinase (PKA) and protein DPY-30/SDC1.


Pssm-ID: 438544  Cd Length: 50  Bit Score: 44.86  E-value: 1.08e-06
                         10        20        30
                 ....*....|....*....|....*....|...
gi 568996474 326 EDPYHVALRYVEKHNILHIFQ--VQNMIKHRDE 356
Cdd:cd22975    1 EDPYEKAVKYLEKHNILQLFQelTAGLVYERPD 33
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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