|
Name |
Accession |
Description |
Interval |
E-value |
| CEP63 |
pfam17045 |
Centrosomal protein of 63 kDa; CEP63 is a family of eukaryotic proteins involved in centriole ... |
70-332 |
5.00e-104 |
|
Centrosomal protein of 63 kDa; CEP63 is a family of eukaryotic proteins involved in centriole activity.
Pssm-ID: 465338 [Multi-domain] Cd Length: 264 Bit Score: 319.46 E-value: 5.00e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 70 LTSCEAELQELMKQIDIMVAHKKSEWEGQTHALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYK 149
Cdd:pfam17045 1 LSSCEAELQELMKQIDIMVAHKKSEWEGQTRALETRLDIREEELLSARNTLERKHKEIGLLRQQLEELEKGKQELVAKYE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 150 EELLKLQEELSRLKRSYEKLQKKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKAL 229
Cdd:pfam17045 81 QQLQKLQEELSKLKRSYEKLQRKQLKEAREEAKSREEDRSELSRLNGKLEEFRQKSLEWEQQRLQYQQQVASLEAQRKAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 230 AEQSEIIQA-----QLANRKQKLEsvelSSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKE 304
Cdd:pfam17045 161 AEQSSLIQSaayqvQLEGRKQCLE----ASQSEIQRLRSKLERAQDSLCAQELELERLRMRVSELGDSNRKLLEEQQRLL 236
|
250 260
....*....|....*....|....*...
gi 755531337 305 EKLRESEKLLEALQEEQKELKASLQSQE 332
Cdd:pfam17045 237 EELRMSQRQLQVLQNELMELKATLQSQD 264
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
91-416 |
3.59e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.10 E-value: 3.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 91 KKSEWEGQTHALEtcLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAmeykeellklqeelSRLKRSYEKLQ 170
Cdd:TIGR02169 219 EKREYEGYELLKE--KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIE--------------QLLEELNKKIK 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 171 KKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQ---AQLANRKQKL 247
Cdd:TIGR02169 283 DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERkrrDKLTEEYAEL 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 248 ESVELSSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKAS 327
Cdd:TIGR02169 363 KEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEE 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 328 LqsqETFILEAKMQE-KLQTTLKAVGT-QQSVERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHSSEELLQAEVTRLEGS 405
Cdd:TIGR02169 443 K---EDKALEIKKQEwKLEQLAADLSKyEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAS 519
|
330
....*....|.
gi 755531337 406 LESVSATCKQL 416
Cdd:TIGR02169 520 IQGVHGTVAQL 530
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
110-429 |
4.76e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 4.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 110 DRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLQKKQlREFRGNTKSFREDRS 189
Cdd:TIGR02169 687 KRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE-QEIENVKSELKELEA 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 190 EIERLTGKIEEFRQKSLDWEkqRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQ---SEIQHLNSKLE 266
Cdd:TIGR02169 766 RIEELEEDLHKLEEALNDLE--ARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEyleKEIQELQEQRI 843
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 267 RAKDTICANELEIERLNIRVNDLmgtnmtiLQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQ----E 342
Cdd:TIGR02169 844 DLKEQIKSIEKEIENLNGKKEEL-------EEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQiekkR 916
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 343 KLQTTLKA-VGTQQSVERPLEDCQKERKYSSPGQGVLDNVLSQLDfshSSEELLQA-------------EVTRLEGSLES 408
Cdd:TIGR02169 917 KRLSELKAkLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQ---RVEEEIRAlepvnmlaiqeyeEVLKRLDELKE 993
|
330 340
....*....|....*....|....
gi 755531337 409 VSATCKQLS---QELMEKYEELKR 429
Cdd:TIGR02169 994 KRAKLEEERkaiLERIEEYEKKKR 1017
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
166-473 |
7.68e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 7.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 166 YEKLQKKqLREFRGN--TKSFREDRSEIERLTGKIEEFRQKSLDWEKQRliyQQQVSSLEAQRKALAEQSEIIqaqlaNR 243
Cdd:TIGR02169 213 YQALLKE-KREYEGYelLKEKEALERQKEAIERQLASLEEELEKLTEEI---SELEKRLEEIEQLLEELNKKI-----KD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 244 KQKLESVELssQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKE 323
Cdd:TIGR02169 284 LGEEEQLRV--KEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 324 LKASLQsqetfILEAKMQEKLQTTLKAVGTQQSVERPLEDCQKERkysSPGQGVLDNVLSQLDFSHSSEELLQAEVTRLE 403
Cdd:TIGR02169 362 LKEELE-----DLRAELEEVDKEFAETRDELKDYREKLEKLKREI---NELKRELDRLQEELQRLSEELADLNAAIAGIE 433
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 404 GSLesvsatcKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQILQADQTYSSalegMKMEISQLTREL 473
Cdd:TIGR02169 434 AKI-------NELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDR----VEKELSKLQREL 492
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
161-469 |
1.90e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.23 E-value: 1.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 161 RLKRSYEKLQKKQLRefrgNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQL 240
Cdd:TIGR02168 236 ELREELEELQEELKE----AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 241 ANRKQKLESVELssqsEIQHLNSKLERAKDTICANELEIERLNIRVNDLmgtnmtilqdhrqkEEKLRESEKLLEALQEE 320
Cdd:TIGR02168 312 ANLERQLEELEA----QLEELESKLDELAEELAELEEKLEELKEELESL--------------EAELEELEAELEELESR 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 321 QKELKASLQSQETFILEAKMQEKLQTtlkavGTQQSVERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHSSEEL--LQAE 398
Cdd:TIGR02168 374 LEELEEQLETLRSKVAQLELQIASLN-----NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELeeLEEE 448
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 755531337 399 VTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLkEQILQADQTYSSALEGMKMEISQL 469
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL-ERLQENLEGFSEGVKALLKNQSGL 518
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
109-448 |
3.48e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.46 E-value: 3.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 109 RDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEykeellklqeelsrlKRSYEKLQKKQLREFRGNTKSFREDR 188
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEE---------------LEQLRKELEELSRQISALRKDLARLE 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 189 SEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVElssqSEIQHLNSklera 268
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALR----EALDELRA----- 810
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 269 kdticanelEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFIleAKMQEKLQTTL 348
Cdd:TIGR02168 811 ---------ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI--EELESELEALL 879
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 349 KAVgtqQSVERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHsseELLQAEVTRLEGSLESVSATCKQLSQELMEKYE-EL 427
Cdd:TIGR02168 880 NER---ASLEEALALLRSELEELSEELRELESKRSELRREL---EELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTL 953
|
330 340
....*....|....*....|.
gi 755531337 428 KRMEGHNNEYRTEIKKLKEQI 448
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRL 974
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
74-378 |
1.67e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 74 EAELQELMKQIDIMVAhKKSEWEGQTHALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQemameykeell 153
Cdd:COG1196 238 EAELEELEAELEELEA-ELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA----------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 154 klqEELSRLKRSYEKLQKKQLREfrgntksfREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQS 233
Cdd:COG1196 306 ---RLEERRRELEERLEELEEEL--------AELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 234 EIIQAQLANRKQKLESVELSSQSEIQHLNSKLERAKDticaNELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKL 313
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE 450
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755531337 314 LEALQEEQKELKASLQSQETfiLEAKMQEKLQTTLKAVGTQQSVERPLEdcQKERKYSSPGQGVL 378
Cdd:COG1196 451 EAELEEEEEALLELLAELLE--EAALLEAALAELLEELAEAAARLLLLL--EAEADYEGFLEGVK 511
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
75-388 |
4.45e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 4.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 75 AELQELmkQIDIMVAHKKSEwEGQTHALETCLDIRDRELKALRSQLDMkhkevgiLHQQIEEHEKTKQEMAMEYKEELLK 154
Cdd:TIGR02168 220 AELREL--ELALLVLRLEEL-REELEELQEELKEAEEELEELTAELQE-------LEEKLEELRLEVSELEEEIEELQKE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 155 LQEELSRLKRSyeKLQKKQLREfrgntkSFREDRSEIERLTGKIEEfrqksldWEKQRLIYQQQVSSLEAQRKALAEQSE 234
Cdd:TIGR02168 290 LYALANEISRL--EQQKQILRE------RLANLERQLEELEAQLEE-------LESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 235 IIQAQLANRKQKLESVELSSQS---EIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRES- 310
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEEleeQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAe 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 311 -----------EKLLEALQEEQKELKASLQSQETFILEAkmQEKLQTTLKAVGTQQSVERPLEDCQkeRKYSSPGQGVLD 379
Cdd:TIGR02168 435 lkelqaeleelEEELEELQEELERLEEALEELREELEEA--EQALDAAERELAQLQARLDSLERLQ--ENLEGFSEGVKA 510
|
....*....
gi 755531337 380 NVLSQLDFS 388
Cdd:TIGR02168 511 LLKNQSGLS 519
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
160-586 |
1.04e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 160 SRLKRSYEKLQKKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKsldwEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQ 239
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAEL----QEELEELEEELEELEAELEELREELEKLEKL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 240 LANRKQKLESVELSSQ---------------SEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNM-TILQDHRQK 303
Cdd:COG4717 125 LQLLPLYQELEALEAElaelperleeleerlEELRELEEELEELEAELAELQEELEELLEQLSLATEEELqDLAEELEEL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 304 EEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEKLQTT--LKAVGTQQSVERPLEDCQKERKYSSPGQGVLDNV 381
Cdd:COG4717 205 QQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEArlLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLG 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 382 LSQLDFSHSSEELLQAEVTRLEGSLEsvsATCKQLSQELMEKYeeLKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEG 461
Cdd:COG4717 285 LLALLFLLLAREKASLGKEAEELQAL---PALEELEEEELEEL--LAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 462 MKmEIsQLTRELHQRDITIASAKCSSSDMEKQLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETV----MKLELGLH 537
Cdd:COG4717 360 EE-EL-QLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeeeLEEELEEL 437
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 755531337 538 EAKEISLADLQENYIEALNKLVSENQQLQKDlmSTKSELEHATNMCKKK 586
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLEED--GELAELLQELEELKAE 484
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
275-577 |
1.59e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.94 E-value: 1.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 275 NELEIERLNI-RVNDLMG---TNMTILQDHRQKEEKLREseklleaLQEEQKELKASLQSQETFILEAKMQEKLQTTLKA 350
Cdd:COG1196 179 RKLEATEENLeRLEDILGeleRQLEPLERQAEKAERYRE-------LKEELKELEAELLLLKLRELEAELEELEAELEEL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 351 VGTQQSVERPLEDCQKERKysspgqgVLDNVLSQLDFS----HSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEE 426
Cdd:COG1196 252 EAELEELEAELAELEAELE-------ELRLELEELELEleeaQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 427 LKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEgmkmEISQLTRELHQRDITIASAKCSSSDMEKQLKAEMQKAEEKAV 506
Cdd:COG1196 325 LAELEEELEELEEELEELEEELEEAEEELEEAEA----ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 755531337 507 EHKEILSQLESLKLENHRLSETVMKLELGL--HEAKEISLADLQENYIEALNKLVSENQQLQKDLMSTKSELE 577
Cdd:COG1196 401 QLEELEEAEEALLERLERLEEELEELEEALaeLEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
133-411 |
1.77e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.94 E-value: 1.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 133 QIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSyEKLQKKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQR 212
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEEL-EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 213 LIYQQQVSSLEAQRKALAEQSEIIQAQLAN-----------------RKQKLESVELSSQSEIQHLNSKLERAKDTICAN 275
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAEleeeleeleeeleeleeELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 276 ELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKM--QEKLQTTLKAVGT 353
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEalEEAAEEEAELEEE 457
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 755531337 354 QQSVERPLEDCQKERKYsspGQGVLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSA 411
Cdd:COG1196 458 EEALLELLAELLEEAAL---LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA 512
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
53-635 |
2.66e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.35 E-value: 2.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 53 MEALLEGIQNRGHSGGFLTSCE-AELQELMKQIDIMVAHKKSEWEGQTHALETCLDIRDRELKALRSQLDMKHKEVGILH 131
Cdd:pfam15921 297 IQSQLEIIQEQARNQNSMYMRQlSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLD 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 132 QQIEE-----HEKTKQemameykeellklqeelsrlkRSYEKLQKKQLREF-RGNTKSFREDRSEIERLTGKIEEFRQ-- 203
Cdd:pfam15921 377 DQLQKlladlHKREKE---------------------LSLEKEQNKRLWDRdTGNSITIDHLRRELDDRNMEVQRLEAll 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 204 KSLDWEKQRLIYQQ------------QVSSLEAQRKALAEQSEIIQAQLANRKQKLESvelsSQSEIQHLNSKLERAKDT 271
Cdd:pfam15921 436 KAMKSECQGQMERQmaaiqgknesleKVSSLTAQLESTKEMLRKVVEELTAKKMTLES----SERTVSDLTASLQEKERA 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 272 ICANELEIERLNIRVNdlmgTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQsqetfILEAKMQEKLQ------ 345
Cdd:pfam15921 512 IEATNAEITKLRSRVD----LKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIE-----ILRQQIENMTQlvgqhg 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 346 TTLKAVGTQQS-VERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHSSEELlqAEVTRLEGSLESVSATcKQLSQELMEKY 424
Cdd:pfam15921 583 RTAGAMQVEKAqLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL--EKVKLVNAGSERLRAV-KDIKQERDQLL 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 425 EELKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEGMKMEISQLTRELHQRDITIASAKCSSSD-------MEKQLKAE 497
Cdd:pfam15921 660 NEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHamkvamgMQKQITAK 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 498 -----------------MQKA--------EEK----------AVEHKEILSQLESLKLENHRLSETVMKLELGLHEAkEI 542
Cdd:pfam15921 740 rgqidalqskiqfleeaMTNAnkekhflkEEKnklsqelstvATEKNKMAGELEVLRSQERRLKEKVANMEVALDKA-SL 818
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 543 SLADLQEnyiealnkLVSENQQlqkdlMSTKSELEHATNMckkkdGEIFNPAHSRAAGFKNAELKPIHGQHRHDGIKTEQ 622
Cdd:pfam15921 819 QFAECQD--------IIQRQEQ-----ESVRLKLQHTLDV-----KELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSSQ 880
|
650
....*....|....*.
gi 755531337 623 YKT---GHHSPRGQTL 635
Cdd:pfam15921 881 STAsflSHHSRKTNAL 896
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
111-590 |
7.36e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.76 E-value: 7.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 111 RELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMA---MEYKEELLKLQEELSRLKRSYEKLQK-----KQLREFRGNTK 182
Cdd:PRK03918 207 REINEISSELPELREELEKLEKEVKELEELKEEIEeleKELESLEGSKRKLEEKIRELEERIEElkkeiEELEEKVKELK 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 183 SFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEiiqaqlanRKQKLESVELSSQSEIQHLN 262
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE--------RLEELKKKLKELEKRLEELE 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 263 SKlERAKDTICANELEIERLNIRVNDLmgtnmtilqDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKmqE 342
Cdd:PRK03918 359 ER-HELYEEAKAKKEELERLKKRLTGL---------TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELK--K 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 343 KLQTTLKAVGTQQSVERPLEDCQKE---RKYSSPgqgvLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQLsqE 419
Cdd:PRK03918 427 AIEELKKAKGKCPVCGRELTEEHRKellEEYTAE----LKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLK--E 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 420 LMEKYEELK-RMEGHNNEyrtEIKKLKEQIlqadQTYSSALEGMKMEISQLTRELHqrditiasakcSSSDMEKQLKAEM 498
Cdd:PRK03918 501 LAEQLKELEeKLKKYNLE---ELEKKAEEY----EKLKEKLIKLKGEIKSLKKELE-----------KLEELKKKLAELE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 499 QKAEEKAVEHKEILSQLESLKLenhrlsETVMKLELGLHEAKEIsladlQENYIEALNkLVSENQQLQKDLMSTKSELEH 578
Cdd:PRK03918 563 KKLDELEEELAELLKELEELGF------ESVEELEERLKELEPF-----YNEYLELKD-AEKELEREEKELKKLEEELDK 630
|
490
....*....|..
gi 755531337 579 ATNMCKKKDGEI 590
Cdd:PRK03918 631 AFEELAETEKRL 642
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
219-551 |
8.32e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.75 E-value: 8.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 219 VSSLEAQRKALAEQSEIIQaQLANRKQKLESVELSSQS-EIQHLNSKLERAKDTICANELEIERLNIRVNdlmgtnmTIL 297
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAE-RYKELKAELRELELALLVlRLEELREELEELQEELKEAEEELEELTAELQ-------ELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 298 QDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEK-LQTTLKAVGTQQSVERPLEDCQKERKYSspgqg 376
Cdd:TIGR02168 267 EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAnLERQLEELEAQLEELESKLDELAEELAE----- 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 377 vLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQIlqadqtyS 456
Cdd:TIGR02168 342 -LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERL-------E 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 457 SALEGMKMEISQLTRELHQRDITIASAKCSSSDMEkqlKAEMQKAEEKAVEHKEILSQLeslkLENHRLSETVMKLELGL 536
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQAELEELEEE---LEELQEELERLEEALEELREE----LEEAEQALDAAERELAQ 486
|
330
....*....|....*
gi 755531337 537 HEAKEISLADLQENY 551
Cdd:TIGR02168 487 LQARLDSLERLQENL 501
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
115-586 |
1.24e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 52.03 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 115 ALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLK---------RSYEKLQKKQLREFRGNTKSFR 185
Cdd:pfam05483 96 SIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKdlikennatRHLCNLLKETCARSAEKTKKYE 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 186 EDRseierltgkiEEFRQKSLDWEKQrliYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQSEIQHLNSKL 265
Cdd:pfam05483 176 YER----------EETRQVYMDLNNN---IEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 266 ERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLqsQETFILEAKMQEKLQ 345
Cdd:pfam05483 243 SLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSL--QRSMSTQKALEEDLQ 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 346 TTLKAV-GTQQSVERPLEDCQKERKYSSpgqgvldNVLSQLDFSHSS-EELLQAEVTRLEGSLESVsatcKQLSQELMEK 423
Cdd:pfam05483 321 IATKTIcQLTEEKEAQMEELNKAKAAHS-------FVVTEFEATTCSlEELLRTEQQRLEKNEDQL----KIITMELQKK 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 424 YEELKRMEGHNNEYRTEIKKLKeQILQADQTY----------SSALEGMKMEISQL----TRELHQRDITIASAKCSSSD 489
Cdd:pfam05483 390 SSELEEMTKFKNNKEVELEELK-KILAEDEKLldekkqfekiAEELKGKEQELIFLlqarEKEIHDLEIQLTAIKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 490 MEKQLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETV--MKLELGLHEAKEISLADLQENYIEALNKLVSENQQLQK 567
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRD 548
|
490
....*....|....*....
gi 755531337 568 DLMSTKSELEHATNMCKKK 586
Cdd:pfam05483 549 ELESVREEFIQKGDEVKCK 567
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
94-590 |
2.07e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 94 EWEGQTHaLETCLDIRDRELKALRSQL----DMKHKEVGILHQQIEEHEKTKQEMAMEYKEELLKlqeelsrlkRSYEKL 169
Cdd:pfam15921 69 AYPGKEH-IERVLEEYSHQVKDLQRRLnesnELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADI---------RRRESQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 170 QKKQLREFRGNT-------KSFRED-----RSEIERL-------TGKIEEFRQKSLDWEKQ--RLIYQQQV--------- 219
Cdd:pfam15921 139 SQEDLRNQLQNTvheleaaKCLKEDmledsNTQIEQLrkmmlshEGVLQEIRSILVDFEEAsgKKIYEHDSmstmhfrsl 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 220 -SSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQSEIQHL-NSKLERAKDTICANELEIERLNIRVN------DLMG 291
Cdd:pfam15921 219 gSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLlQQHQDRIEQLISEHEVEITGLTEKASsarsqaNSIQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 292 TNMTILQDH--RQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEKLQTTlkavgtqqsverPLEDCQKERK 369
Cdd:pfam15921 299 SQLEIIQEQarNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANS------------ELTEARTERD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 370 YSSPGQGVLDNVLSQL--DFSHSSEEL-LQAEVT-RLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLK 445
Cdd:pfam15921 367 QFSQESGNLDDQLQKLlaDLHKREKELsLEKEQNkRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQM 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 446 EQILQADQ----------TYSSALEGMKMEISQLTRELHQRDITIASAKCSSSDMEKQLKAEMQKAEEKAVEHKEI---- 511
Cdd:pfam15921 447 ERQMAAIQgkneslekvsSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLrsrv 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 512 ---LSQLESLKLENHRLSETVMKLE-LGLHEAKEISLADLQENYIEALNKLVS-----------ENQQLQKDLMSTKSEL 576
Cdd:pfam15921 527 dlkLQELQHLKNEGDHLRNVQTECEaLKLQMAEKDKVIEILRQQIENMTQLVGqhgrtagamqvEKAQLEKEINDRRLEL 606
|
570
....*....|....
gi 755531337 577 EHATNMCKKKDGEI 590
Cdd:pfam15921 607 QEFKILKDKKDAKI 620
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
211-531 |
3.46e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.61 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 211 QRLIYQQQVSSLEAQRKALAEQSEIIQAQLAnRKQKLESVELSSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDL- 289
Cdd:pfam12128 588 KRIDVPEWAASEEELRERLDKAEEALQSARE-KQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEk 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 290 MGTNMTILQDHRQKEEKLRESEKLLEALQeeqKELKASLQSQETFILEAKMQeKLQTTLKAVGT---------------Q 354
Cdd:pfam12128 667 DKKNKALAERKDSANERLNSLEAQLKQLD---KKHQAWLEEQKEQKREARTE-KQAYWQVVEGAldaqlallkaaiaarR 742
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 355 QSVERPLEDCQKERKYSSPGQGVLDNVLSQLdfshsseellQAEVTRLEGSLESvsatCKQLSQELMEKYEELK-RMEGH 433
Cdd:pfam12128 743 SGAKAELKALETWYKRDLASLGVDPDVIAKL----------KREIRTLERKIER----IAVRRQEVLRYFDWYQeTWLQR 808
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 434 NNEYRTEIKKLKEQILQADQTYSSALEGMKMEISQLTRELHQRDitiaSAKCSSSDMEKQLKAEMQK---------AEEK 504
Cdd:pfam12128 809 RPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASE----KQQVRLSENLRGLRCEMSKlatlkedanSEQA 884
|
330 340
....*....|....*....|....*..
gi 755531337 505 AVEHKEILSQLESLKLENHRLSETVMK 531
Cdd:pfam12128 885 QGSIGERLAQLEDLKLKRDYLSESVKK 911
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
160-590 |
4.21e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 4.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 160 SRLKRSYEKLqKKQLREFRGNTKSF----REDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEI 235
Cdd:TIGR04523 120 NKLEVELNKL-EKQKKENKKNIDKFlteiKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLK 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 236 IQAQLANRKQKLESVElSSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLE 315
Cdd:TIGR04523 199 LELLLSNLKKKIQKNK-SLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELE 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 316 ALQEEQKELKASLQSQETFILEAKmQEKLQTTLKAVGTQqsverpLEDCQKErkysspgqgvLDNVLSQLDFSHSSEELL 395
Cdd:TIGR04523 278 QNNKKIKELEKQLNQLKSEISDLN-NQKEQDWNKELKSE------LKNQEKK----------LEEIQNQISQNNKIISQL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 396 QAEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQIlqadqtysSALEGMKMEISQLTRELhq 475
Cdd:TIGR04523 341 NEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQI--------NDLESKIQNQEKLNQQK-- 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 476 rditiasakcsssdmEKQLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETVMKLELGLHEAKeiSLADLQENYIEAL 555
Cdd:TIGR04523 411 ---------------DEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLD--NTRESLETQLKVL 473
|
410 420 430
....*....|....*....|....*....|....*....
gi 755531337 556 ----NKLVSENQQLQKDLMSTKSELEHATNMCKKKDGEI 590
Cdd:TIGR04523 474 srsiNKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
91-592 |
7.28e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 7.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 91 KKSEWEGQTHALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMameykeelLKLQEELSRLKRSYEKLQ 170
Cdd:TIGR04523 167 QKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQI--------SELKKQNNQLKDNIEKKQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 171 KKqlrefrgntksFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLAN-RKQKLES 249
Cdd:TIGR04523 239 QE-----------INEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlNNQKEQD 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 250 VELSSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQ 329
Cdd:TIGR04523 308 WNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIK 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 330 SQETFI--LEAKMQEKLQTTLKAVGTQQSVERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHSSEEL-----------LQ 396
Cdd:TIGR04523 388 NLESQIndLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELiiknldntresLE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 397 AEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQI---LQADQTYSSALEGMKMEISQLTREL 473
Cdd:TIGR04523 468 TQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIsslKEKIEKLESEKKEKESKISDLEDEL 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 474 HQRDITIASAKCSSSDMEK-----QLKAEMQKAEEKAVEHKEILSQLESLKLE-NHRLSETVMKL-----ELGLHEAKEI 542
Cdd:TIGR04523 548 NKDDFELKKENLEKEIDEKnkeieELKQTQKSLKKKQEEKQELIDQKEKEKKDlIKEIEEKEKKIsslekELEKAKKENE 627
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 755531337 543 SLADLQENYIEALNKLVSENQQLQKDL---MSTKSELEHATNMCKKKDGEIFN 592
Cdd:TIGR04523 628 KLSSIIKNIKSKKNKLKQEVKQIKETIkeiRNKWPEIIKKIKESKTKIDDIIE 680
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
263-592 |
1.70e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 1.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 263 SKLERAKdticaNELEIERLNIRVNDLmgtnmtILQDHRQKEEKLR-ESEKLlealqEEQKELKASLQSQETFILeAKMQ 341
Cdd:TIGR02169 170 RKKEKAL-----EELEEVEENIERLDL------IIDEKRQQLERLRrEREKA-----ERYQALLKEKREYEGYEL-LKEK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 342 EKLQTTLKAVGTQ-QSVERPLEDCQKERKYSSPGQGVLDNVLSQLdfSHSSEELLQAEVTRLEGSLESVSATCKQLSQEL 420
Cdd:TIGR02169 233 EALERQKEAIERQlASLEEELEKLTEEISELEKRLEEIEQLLEEL--NKKIKDLGEEEQLRVKEKIGELEAEIASLERSI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 421 MEKYEELKRMEGHNNEYRTEIKKLKEQILQADQtyssALEGMKMEISQLTRELhqrditiasakcssSDMEKQLKAEMQK 500
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELER----EIEEERKRRDKLTEEY--------------AELKEELEDLRAE 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 501 AEEKAVEHKE--------------ILSQLESLKLENHRLSETVMKLELGLHEAKEiSLADLqenyIEALNKLVSENQQLQ 566
Cdd:TIGR02169 373 LEEVDKEFAEtrdelkdyreklekLKREINELKRELDRLQEELQRLSEELADLNA-AIAGI----EAKINELEEEKEDKA 447
|
330 340
....*....|....*....|....*.
gi 755531337 567 KDLMSTKSELEHATNMCKKKDGEIFN 592
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYD 473
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
302-590 |
3.61e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.36 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 302 QKEEKLRESEKLLEALQEEQKELKASLQSqetfiLEAKMQEKLQTTLKAVGTQQSVERPLEDCQKerkysspgqgvldnv 381
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIAELEKALAE-----LRKELEELEEELEQLRKELEELSRQISALRK--------------- 733
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 382 lsQLDFSHSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQILQADQTYSSAleg 461
Cdd:TIGR02168 734 --DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDEL--- 808
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 462 mKMEISQLTRELHQRDITIASakcsssdMEKQLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETVMKLELGLHEAKE 541
Cdd:TIGR02168 809 -RAELTLLNEEAANLRERLES-------LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLN 880
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 755531337 542 ISlaDLQENYIEALNKLVSENQQLQKDLMSTKSELEHATNMCKKKDGEI 590
Cdd:TIGR02168 881 ER--ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
188-400 |
4.06e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 4.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 188 RSEIERLTGKIEEFRQKS--LDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESV-----ELSSQSEIQH 260
Cdd:COG3206 188 RKELEEAEAALEEFRQKNglVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGpdalpELLQSPVIQQ 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 261 LNSKLERAkdticanELEIERLNIRVNDlmgtnmtilqDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFIL--EA 338
Cdd:COG3206 268 LRAQLAEL-------EAELAELSARYTP----------NHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQarEA 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755531337 339 KMQEKLQTTLKAVGTQQSVERPLEdcQKERKYSSpGQGVLDNVLSQLDFSHSSEELLQAEVT 400
Cdd:COG3206 331 SLQAQLAQLEARLAELPELEAELR--RLEREVEV-ARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
188-448 |
5.23e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 5.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 188 RSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEI---------IQAQLANRKQKLESVELSSqSEI 258
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYswdeidvasAEREIAELEAELERLDASS-DDL 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 259 QHLNSKLERAkdticanELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQK-----ELKASLQSQET 333
Cdd:COG4913 688 AALEEQLEEL-------EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlelraLLEERFAAALG 760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 334 FILEAKMQEKLQTTLKAVGTQQS-VERPLEDCQKE--RKYSSPGQGVLDNVLSQLDFshsseellQAEVTRLEGSlesvs 410
Cdd:COG4913 761 DAVERELRENLEERIDALRARLNrAEEELERAMRAfnREWPAETADLDADLESLPEY--------LALLDRLEED----- 827
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 755531337 411 atckqlsqELMEKYEELKRMEGHNN---------EYRTEIKKLKEQI 448
Cdd:COG4913 828 --------GLPEYEERFKELLNENSiefvadllsKLRRAIREIKERI 866
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
197-369 |
8.51e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 8.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 197 KIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVelssQSEIQHLNSKLERAKDTI---- 272
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKL----QAEIAEAEAEIEERREELgera 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 273 --------CANELE-----------IERLNIrVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQET 333
Cdd:COG3883 93 ralyrsggSVSYLDvllgsesfsdfLDRLSA-LSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190
....*....|....*....|....*....|....*.
gi 755531337 334 fILEAKMQEKLQTTLKAVGTQQSVERPLEDCQKERK 369
Cdd:COG3883 172 -ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELA 206
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
74-281 |
9.07e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 9.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 74 EAELQELMKQIDIM------VAHKKSEWEGQTHALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAME 147
Cdd:COG4942 26 EAELEQLQQEIAELekelaaLKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 148 YkeellklqeelSRLKRSYEKLQKKQLREFRGNTKSF--------------REDRSEIERLTGKIEEFRQKSLDWEKQRL 213
Cdd:COG4942 106 L-----------AELLRALYRLGRQPPLALLLSPEDFldavrrlqylkylaPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 755531337 214 IYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLEsvelSSQSEIQHLNSKLERAKDTICANELEIER 281
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELA----ELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
170-575 |
1.18e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 170 QKKQLREFRGNTKS----FREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLAnrkq 245
Cdd:PRK02224 228 QREQARETRDEADEvleeHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAG---- 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 246 kLESVELSSQSEIQhlnSKLERAKDTiCANELEIERLNIrvndlmgtnmtilQDHRQKEEKLRESEKLLEA----LQEEQ 321
Cdd:PRK02224 304 -LDDADAEAVEARR---EELEDRDEE-LRDRLEECRVAA-------------QAHNEEAESLREDADDLEEraeeLREEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 322 KELKASLQSQETFIleakmqEKLQTTLKAVGTQ-QSVERPLEDCQKERKYSspgQGVLDNVLSQLDFSHSSEELLQAEVT 400
Cdd:PRK02224 366 AELESELEEAREAV------EDRREEIEELEEEiEELRERFGDAPVDLGNA---EDFLEELREERDELREREAELEATLR 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 401 RLEGSLESVSA--------TCKQLSQE------LMEKYEELKRMEGHNNEYRTEIKKLKEQILQADQTYSSA--LEGMKM 464
Cdd:PRK02224 437 TARERVEEAEAlleagkcpECGQPVEGsphvetIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEdrIERLEE 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 465 EISQLTRELHQRDITIA--SAKCSSSDMEKQ-LKAEMQKAEEKAVE-HKEILSQLESLKLENHRLSETVMKLElglHEAK 540
Cdd:PRK02224 517 RREDLEELIAERRETIEekRERAEELRERAAeLEAEAEEKREAAAEaEEEAEEAREEVAELNSKLAELKERIE---SLER 593
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 755531337 541 EISLADLQENYIEALNKLVSENQQLQ------KDLMSTKSE 575
Cdd:PRK02224 594 IRTLLAAIADAEDEIERLREKREALAelnderRERLAEKRE 634
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
186-586 |
3.04e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.33 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 186 EDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEII----QAQLANRKQKLESVELSSQSEIQHL 261
Cdd:pfam05483 251 EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIkmslQRSMSTQKALEEDLQIATKTICQLT 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 262 NSK------LERAKDTICANELEIERLNIRVNDLMGTNMTILQDH-----------RQKEEKLRESEKLLEALQEEQKEL 324
Cdd:pfam05483 331 EEKeaqmeeLNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNedqlkiitmelQKKSSELEEMTKFKNNKEVELEEL 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 325 KASLQSQETFILEAKMQEKLQTTLKavGTQQSVERPLEDCQKErkysspgqgvLDNVLSQLDFSHSSEELLQAEVTRLEG 404
Cdd:pfam05483 411 KKILAEDEKLLDEKKQFEKIAEELK--GKEQELIFLLQAREKE----------IHDLEIQLTAIKTSEEHYLKEVEDLKT 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 405 SLES-------VSATCKQLSQELMEKYEELKRMEGHNNEYRTEI---KKLKEQILQADQTYSSALEGMKMEISQLTRELH 474
Cdd:pfam05483 479 ELEKeklknieLTAHCDKLLLENKELTQEASDMTLELKKHQEDIincKKQEERMLKQIENLEEKEMNLRDELESVREEFI 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 475 QRDITIasaKCSSSDMEKQLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETVMKLElglHEAKEISLADLQENyiEA 554
Cdd:pfam05483 559 QKGDEV---KCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELH---QENKALKKKGSAEN--KQ 630
|
410 420 430
....*....|....*....|....*....|..
gi 755531337 555 LNKLVSENQQLQKDLMSTKSELEHATNMCKKK 586
Cdd:pfam05483 631 LNAYEIKVNKLELELASAKQKFEEIIDNYQKE 662
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
72-338 |
4.03e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 4.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 72 SCEAELQELMKQIDIMVAhKKSEWEgqthALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYKEE 151
Cdd:COG4913 665 SAEREIAELEAELERLDA-SSDDLA----ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 152 LLKLQEELSRL--KRSYEKLQKKQLREFRGN-TKSFREDRSEIERLTGKIEE-FRQKSLDWekqRLIYQQQVSSLEAQRK 227
Cdd:COG4913 740 EDLARLELRALleERFAAALGDAVERELRENlEERIDALRARLNRAEEELERaMRAFNREW---PAETADLDADLESLPE 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 228 ALAEQSEIIQAQLANRKQKL-ESVELSSQSEIQHLNSKLERAKDTIcanELEIERLNirvndlmgtnmTILQDHRQKEE- 305
Cdd:COG4913 817 YLALLDRLEEDGLPEYEERFkELLNENSIEFVADLLSKLRRAIREI---KERIDPLN-----------DSLKRIPFGPGr 882
|
250 260 270
....*....|....*....|....*....|....*
gi 755531337 306 --KLRESEKLLEALQEEQKELKASLQSQETFILEA 338
Cdd:COG4913 883 ylRLEARPRPDPEVREFRQELRAVTSGASLFDEEL 917
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
130-369 |
5.09e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 5.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 130 LHQQIEEHEKTKQEMAmeykeellKLQEELSRLKRSYEKLQKKQlrefrgntksfREDRSEIERLTGKIEEFRQKSLDWE 209
Cdd:COG4942 15 AAAQADAAAEAEAELE--------QLQQEIAELEKELAALKKEE-----------KALLKQLAALERRIAALARRIRALE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 210 KQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESveLSSQSEIQHLNSKlerakdticANELEIERLNIRVNDL 289
Cdd:COG4942 76 QELAALEAELAELEKEIAELRAELEAQKEELAELLRALYR--LGRQPPLALLLSP---------EDFLDAVRRLQYLKYL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 290 MGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETfILEAKMQEKLQTTLKAVGTQQSVERPLEDCQKERK 369
Cdd:COG4942 145 APARREQAEELRADLAELAALRAELEAERAELEALLAELEEERA-ALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
185-331 |
1.09e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 185 REDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVelSSQSEIQHLNSK 264
Cdd:COG1579 20 DRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNV--RNNKEYEALQKE 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 755531337 265 LERAKDTICANELEIERLNIRVNdlmgtnmtilqdhrQKEEKLRESEKLLEALQEEQKELKASLQSQ 331
Cdd:COG1579 98 IESLKRRISDLEDEILELMERIE--------------ELEEELAELEAELAELEAELEEKKAELDEE 150
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
203-577 |
1.11e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 203 QKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQSEiqhlnsKLERAKDTICANELEIERL 282
Cdd:TIGR00618 239 QQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAA------PLAAHIKAVTQIEQQAQRI 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 283 NIRVNDLMGTNMTIL---QDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEKLQTTLKAVgtQQSVER 359
Cdd:TIGR00618 313 HTELQSKMRSRAKLLmkrAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL--QQQKTT 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 360 PLEDCQKERKYSSpgqgVLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNE--- 436
Cdd:TIGR00618 391 LTQKLQSLCKELD----ILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQEsaq 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 437 -YRTEIKKL--KEQILQADQTYSSALEGMKMEISQLTREL---------HQRDITIASAKCSSSDMEKQLKAEMQKAEEK 504
Cdd:TIGR00618 467 sLKEREQQLqtKEQIHLQETRKKAVVLARLLELQEEPCPLcgscihpnpARQDIDNPGPLTRRMQRGEQTYAQLETSEED 546
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755531337 505 aVEHK--EILSQLESLKLENHRLSETVMKLELGLHEAKEIslADLQENYIEALNKLVSENQQLQKDLMSTKSELE 577
Cdd:TIGR00618 547 -VYHQltSERKQRASLKEQMQEIQQSFSILTQCDNRSKED--IPNLQNITVRLQDLTEKLSEAEDMLACEQHALL 618
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
355-577 |
1.75e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.98 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 355 QSVERPLEDCQKERkysSPGQGVLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQ-------LSQELMEKYEEL 427
Cdd:TIGR02169 684 EGLKRELSSLQSEL---RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEEleedlssLEQEIENVKSEL 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 428 KRMEGHNNEYRTEIKKLKEQILQADQTYSSAlegmkmEISQLTRELHQRDITIASAKCSSSDMEKQLKAEMQKAEEKAVE 507
Cdd:TIGR02169 761 KELEARIEELEEDLHKLEEALNDLEARLSHS------RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 508 HKEILSQLESLKLENHRLSETVMKLELGLHEAKEIsladlQENYIEALNKLVSENQQLQKDLMSTKSELE 577
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE-----LEELEAALRDLESRLGDLKKERDELEAQLR 899
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
118-585 |
2.82e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 118 SQLDMKHKEVGILHQQIEEHEKtkqEMAMEYKEELLKLQEELSRLkRSYEKLQKKQLREFRGNTKSFRED----RSEIER 193
Cdd:pfam12128 251 NTLESAELRLSHLHFGYKSDET---LIASRQEERQETSAELNQLL-RTLDDQWKEKRDELNGELSAADAAvakdRSELEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 194 LTGKIEEFRQKSLDWEKQRL----IYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKlesVELSSQSEIQHLNSKLERAK 269
Cdd:pfam12128 327 LEDQHGAFLDADIETAAADQeqlpSWQSELENLEERLKALTGKHQDVTAKYNRRRSK---IKEQNNRDIAGIKDKLAKIR 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 270 DTICANELEIErlnirvNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEA--------KMQ 341
Cdd:pfam12128 404 EARDRQLAVAE------DDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLenfderieRAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 342 EKLQTTLKAVGTQQSVERPL--------EDCQKERKYSSPGQGVLDNVLSQLD-FSHSSEELLQAEVTRLEGSLESVSAT 412
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQArkrrdqasEALRQASRRLEERQSALDELELQLFpQAGTLLHFLRKEAPDWEQSIGKVISP 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 413 cKQLSQELMEKYEELKRMEGHNNEYrteikKLKEQILQADQTYSSALEgmkmeiSQLTRELHQRDITIASAKCSSSDMEK 492
Cdd:pfam12128 558 -ELLHRTDLDPEVWDGSVGGELNLY-----GVKLDLKRIDVPEWAASE------EELRERLDKAEEALQSAREKQAAAEE 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 493 QLKAEMQKAEEKAVEHKEILSQLESLKLENHRLSETVMKLELGLHEAkeisLADLQENYIEALNKLVSENQQLQKDLMST 572
Cdd:pfam12128 626 QLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKA----LAERKDSANERLNSLEAQLKQLDKKHQAW 701
|
490
....*....|....*...
gi 755531337 573 KSE-----LEHATNMCKK 585
Cdd:pfam12128 702 LEEqkeqkREARTEKQAY 719
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
70-488 |
3.66e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.87 E-value: 3.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 70 LTSCEAELQELMKQIDIMVA---HKKSEWEGQTHALETCldirdrelKALRSQLDMKHKEVGILHQQIE-------EHEK 139
Cdd:pfam15921 512 IEATNAEITKLRSRVDLKLQelqHLKNEGDHLRNVQTEC--------EALKLQMAEKDKVIEILRQQIEnmtqlvgQHGR 583
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 140 TKQEMAMEYKEELLKLQEELSRLKRsYEKLQKKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQV 219
Cdd:pfam15921 584 TAGAMQVEKAQLEKEINDRRLELQE-FKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEV 662
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 220 SSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQSEIQHLNSKLERAKDT---------------------ICANELE 278
Cdd:pfam15921 663 KTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTlksmegsdghamkvamgmqkqITAKRGQ 742
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 279 IERLNIRVNDL--MGTNMTiLQDHRQKEEKLRESEKL-------------LEALQEEQKELKASLQSQETFILEAKMQEK 343
Cdd:pfam15921 743 IDALQSKIQFLeeAMTNAN-KEKHFLKEEKNKLSQELstvateknkmageLEVLRSQERRLKEKVANMEVALDKASLQFA 821
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 344 LQTTLKAVGTQQSVERPLEDCQKERKYSSPGQGVLDNVLSQLdfshsseeLLQAEVTRLEGSLESVSATCKQLSQELMeK 423
Cdd:pfam15921 822 ECQDIIQRQEQESVRLKLQHTLDVKELQGPGYTSNSSMKPRL--------LQPASFTRTHSNVPSSQSTASFLSHHSR-K 892
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 755531337 424 YEELKrmEGHNNEYRTEIKKLKEQILQADQTYSSALEGMKMEISQLTRELHQRDITIASAKCSSS 488
Cdd:pfam15921 893 TNALK--EDPTRDLKQLLQELRSVINEEPTVQLSKAEDKGRAPSLGALDDRVRDCIIESSLRSDI 955
|
|
| Gp58 |
pfam07902 |
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage ... |
291-491 |
4.32e-03 |
|
gp58-like protein; Sequences found in this family are derived from a number of bacteriophage and prophage proteins. They are similar to gp58, a minor structural protein of Lactococcus delbrueckii bacteriophage LL-H.
Pssm-ID: 369586 [Multi-domain] Cd Length: 594 Bit Score: 40.32 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 291 GTNMTILQDHRQKEEKLRES-EKLLEALQEEQKELKASLQSQETFILEAKMQEK--LQTTLKAVGTQQSVERPLEDCQKE 367
Cdd:pfam07902 132 GIATRISEDTDKKLALINETiSGIRREYQDADRQLSSSYQAGIEGLKATMASDKigLQAEIQASAQGLSQRYDNEIRKLS 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 368 RKYSSPGQGVLDNVLSQLD-----FSHSSEELLQAEVTRLEGSLESVSATCKQLSQelmekyeELKRMEGHNNEYRTEIK 442
Cdd:pfam07902 212 AKITTTSSGTTEAYESKLDdlraeFTRSNQGMRTELESKISGLQSTQQSTAYQISQ-------EISNREGAVSRVQQDLD 284
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 755531337 443 KLKEQILQADQTYSS---ALEGMKMEISQLTRELHQRDITIA---SAKCSSSDME 491
Cdd:pfam07902 285 SYQRRLQDAEKNYSSltqTVKGLQSTVSDPNSKLESRITQLAgliEQKVTRGDVE 339
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
108-464 |
4.64e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 40.73 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 108 IRDRELKALRSQLDMKHKEVGILHQQIEEHEKTK---QEMAMEYKEELLKLQEELSRLKRSYEKLQKKQLREFRGNtksf 184
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKeqaKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQEL---- 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 185 REDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEaqrKALAEQSEIIQAQLANRKQKLESVELSSQSEIQHLNSK 264
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQ---EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 265 LERAKDTICANELEIERLNIRvndlmgtnMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEKL 344
Cdd:pfam02463 323 KKKAEKELKKEKEEIEELEKE--------LKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 345 QTTLKAVGTQQSVERPLEdcqkerkysspgqgVLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKY 424
Cdd:pfam02463 395 EELELKSEEEKEAQLLLE--------------LARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKL 460
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 755531337 425 EELKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEGMKM 464
Cdd:pfam02463 461 LKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQ 500
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
116-488 |
5.23e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 39.88 E-value: 5.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 116 LRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLqKKQLREFRGNTKSFREDRSEIERLT 195
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAEL-KEELRQSREKHEELEEKYKELSASS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 196 GKIEEFRQKSLDwekQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQK-----------------LESVELSSQSEI 258
Cdd:pfam07888 111 EELSEEKDALLA---QRAAHEARIRELEEDIKTLTQRVLERETELERMKERakkagaqrkeeeaerkqLQAKLQQTEEEL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 259 QHLNSKLERAKDTICANELEIERLNIRVNDLMGT----------NMTILQDHRQKEEKLRESEKLLEALQEEQKELkASL 328
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKlttahrkeaeNEALLEELRSLQERLNASERKVEGLGEELSSM-AAQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 329 QSQETFILEAKMQEKLQTTLKAVGTQQSVERPLEDCQKERKysspgqgvldNVLSQLDFSHSSEELLQAEVTRLEgsles 408
Cdd:pfam07888 267 RDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERE----------TLQQSAEADKDRIEKLSAELQRLE----- 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 409 vsatcKQLSQELMEKYE---ELKRMEGHN----NEYRTEIKKLKEQiLQADQTYSSALEGMKMEISQLTRELHQRDITIA 481
Cdd:pfam07888 332 -----ERLQEERMEREKlevELGREKDCNrvqlSESRRELQELKAS-LRVAQKEKEQLQAEKQELLEYIRQLEQRLETVA 405
|
....*..
gi 755531337 482 SAKCSSS 488
Cdd:pfam07888 406 DAKWSEA 412
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
100-272 |
6.41e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.14 E-value: 6.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 100 HALETCLDIRDRELKALRSQLDMKHKEVGILHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLqkkqlrefrG 179
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQL---------G 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 180 NTKSFREdrseIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLESVELSSQSEIQ 259
Cdd:COG1579 84 NVRNNKE----YEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELE 159
|
170
....*....|...
gi 755531337 260 HLNSKLERAKDTI 272
Cdd:COG1579 160 ELEAEREELAAKI 172
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
130-339 |
7.67e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 7.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 130 LHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLQKKQlREFRGNTKSFREDRSEIERLTGKIEEFRQksldwE 209
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE-QELAALEAELAELEKEIAELRAELEAQKE-----E 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 210 KQRLIYQQQVSSLEAQRKALAEQSEIIQAQ---------LANRKQKLESVElSSQSEIQHLNSKLERAKDTICANELEIE 280
Cdd:COG4942 106 LAELLRALYRLGRQPPLALLLSPEDFLDAVrrlqylkylAPARREQAEELR-ADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 755531337 281 RLNIRVNDLMGTNMTILQDHRQKEEKLRESeklLEALQEEQKELKASLQSQETFILEAK 339
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAE---LAELQQEAEELEALIARLEAEAAAAA 240
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
165-484 |
7.80e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 39.50 E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 165 SYEKLQKKQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRK 244
Cdd:COG4372 14 SLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 245 QKLESvelsSQSEIQHLNSKLERAKDTICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKEL 324
Cdd:COG4372 94 AELAQ----AQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAAL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 325 KASLQSQETFILEAKMQEKLQTTLKAVGTQQ---SVERPLEDCQKERKYSSPGQGVLDNVLSQLDFSHSSEELLQAEVTR 401
Cdd:COG4372 170 EQELQALSEAEAEQALDELLKEANRNAEKEEelaEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 402 LEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQILQADQTYSSALEGMKMEISQLTRELHQRDITIA 481
Cdd:COG4372 250 ELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLE 329
|
...
gi 755531337 482 SAK 484
Cdd:COG4372 330 LAL 332
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
114-587 |
7.87e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 114 KALRSQLDMKHKEVGILHQQIEEHEKTKQ--EMAMEYKEELLKLQEELSRLKRSYEKLQKKQLREFRGNTKSFREDRSEI 191
Cdd:PTZ00121 1367 EAAEKKKEEAKKKADAAKKKAEEKKKADEakKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA 1446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 192 ERLTGKIEEFRQKsldwEKQRLIYQQQVSSLEAQRKAlAEQSEIIQAQLANRKQKLESVELSSQSEIQHLNSKLERAKDT 271
Cdd:PTZ00121 1447 DEAKKKAEEAKKA----EEAKKKAEEAKKADEAKKKA-EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 272 ICANELEIERLNIRVNDLMGTNMTILQDHRQKEEKLRESEKLLEALQEEQKELKASLQSQETFILEAKMQEKLQTTLKAV 351
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 352 GTQQSVERplEDCQKERkysspgqgvldnvlsqldfshssEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEELKRME 431
Cdd:PTZ00121 1602 EEEKKMKA--EEAKKAE-----------------------EAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 432 GHNNEYRTEIKKLKEQILQADQTYSSALEGMKMEISQLTRElhqrditiASAKCSSSDMEKQLKAEMQKAEEKAVEHKEI 511
Cdd:PTZ00121 1657 EENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE--------AEEAKKAEELKKKEAEEKKKAEELKKAEEEN 1728
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 755531337 512 LSQLESLKLENHRlsETVMKLELGLHEAKEISLADLQENYIEALNKLVSENQQLQKDLMSTKSELEHATNMCKKKD 587
Cdd:PTZ00121 1729 KIKAEEAKKEAEE--DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKD 1802
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
214-483 |
7.94e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 39.61 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 214 IYQQQvsSLEAQRKALAEQSEIIQAQLANRKQKLESVElssqseiqhlnsklerakdticaNELEIERLNIRVNDLMGTN 293
Cdd:COG3206 160 AYLEQ--NLELRREEARKALEFLEEQLPELRKELEEAE-----------------------AALEEFRQKNGLVDLSEEA 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 294 MTILQdhrqkeeKLRESEKLLEALQEEQKELKASLQSqetfiLEAKMQEKLQT--TLKAVGTQQSVERPLEDCQKE---- 367
Cdd:COG3206 215 KLLLQ-------QLSELESQLAEARAELAEAEARLAA-----LRAQLGSGPDAlpELLQSPVIQQLRAQLAELEAElael 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 368 RKYSSPGQGVLDNVLSQLDfshSSEELLQAEVTRLEGSLESVSATCKQLSQELMEKYEELKRMEGHNNEYRTEIKKLKEQ 447
Cdd:COG3206 283 SARYTPNHPDVIALRAQIA---ALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLERE 359
|
250 260 270
....*....|....*....|....*....|....*.
gi 755531337 448 ILQADQTYSSALEgmKMEISQLTRELHQRDITIASA 483
Cdd:COG3206 360 VEVARELYESLLQ--RLEEARLAEALTVGNVRVIDP 393
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
132-366 |
8.06e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.72 E-value: 8.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 132 QQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLQ---KKQLREFRGNTKSFREDRSEIERL-----TGKIEEFRQ 203
Cdd:pfam17380 288 QQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQaemDRQAAIYAEQERMAMERERELERIrqeerKRELERIRQ 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 204 KSLDWEKQRLiyqQQVSSLEAQRKALAEQseIIQAQLANRKQKLESVELSSQSEIQHLNSKLERAKDTIcANELEIERLN 283
Cdd:pfam17380 368 EEIAMEISRM---RELERLQMERQQKNER--VRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE-ARQREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 284 IRVNDLMGTNMTILQDHRQKEEKLRESE---KLLEALQEEQKELKASLQSQETFILEAKMQEKLQTTLKAVGTQQSVERP 360
Cdd:pfam17380 442 EERAREMERVRLEEQERQQQVERLRQQEeerKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKE 521
|
....*.
gi 755531337 361 LEDCQK 366
Cdd:pfam17380 522 MEERQK 527
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
55-543 |
9.33e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 39.57 E-value: 9.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 55 ALLEGIQNRGHSGGFLTSCEAELQelmkqIDIMVAHKKSEWEGQTHALE--------TCLDIRDRELKALRSQLDMKHKE 126
Cdd:TIGR00618 400 KELDILQREQATIDTRTSAFRDLQ-----GQLAHAKKQQELQQRYAELCaaaitctaQCEKLEKIHLQESAQSLKEREQQ 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 127 VGILHQQIEEHEKTKQEMAMEYKEELLKLQEELSRLKRSYEKLQkkQLREFRGNTKSFREDRSEIERLTGKIEEFRQKSL 206
Cdd:TIGR00618 475 LQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQ--DIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLT 552
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 207 DWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLANRKQKLEsvelssqsEIQHLNSKLERAKDTI-CANELEIERLNIR 285
Cdd:TIGR00618 553 SERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITV--------RLQDLTEKLSEAEDMLaCEQHALLRKLQPE 624
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 286 VNDLmgtnmTILQDHRQKEeklresekllealQEEQKELKASLQSQETFILEAKMQEKLQTTLKAVGTQQSVERPLEDCQ 365
Cdd:TIGR00618 625 QDLQ-----DVRLHLQQCS-------------QELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQ 686
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 366 KERKYSSPGQGVLDNVLSQLDFSHSSEELLQAEVTRLEGSLESVSATCKQ---LSQELMEKYEELKRMEGHNNEYRTEIK 442
Cdd:TIGR00618 687 SEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAredALNQSLKELMHQARTVLKARTEAHFNN 766
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755531337 443 KLKEQI-LQADQTYSSALEGMKMEISQLTRELHQRDITIASAKCSSSDMEKQLKAE---MQKAEEKAVEHKEILSQ-LES 517
Cdd:TIGR00618 767 NEEVTAaLQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQcetLVQEEEQFLSRLEEKSAtLGE 846
|
490 500
....*....|....*....|....*.
gi 755531337 518 LKLENHRLSETVMKLELGLHEAKEIS 543
Cdd:TIGR00618 847 ITHQLLKYEECSKQLAQLTQEQAKII 872
|
|
| |
