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Conserved domains on  [gi|767944922|ref|XP_011513454|]
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anterior gradient protein 3 isoform X2 [Homo sapiens]

Protein Classification

thioredoxin domain-containing protein( domain architecture ID 144)

thioredoxin domain-containing protein may function as a thiol disulfide oxidoreductase that catalyzes the oxidation or reduction of protein disulfide bonds using an active site dithiol, present in a CXXC motif

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Thioredoxin_like super family cl00388
Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin ...
37-150 7.01e-86

Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include the families of TRX, protein disulfide isomerase (PDI), tlpA, glutaredoxin, NrdH redoxin, and bacterial Dsb proteins (DsbA, DsbC, DsbG, DsbE, DsbDgamma). Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins, glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.


The actual alignment was detected with superfamily member cd02960:

Pssm-ID: 469754 [Multi-domain]  Cd Length: 130  Bit Score: 247.03  E-value: 7.01e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  37 GWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYV 116
Cdd:cd02960    1 GWGDDIIWVQTYEEGLYKAKKSNKPLMVIHHLEDCPHSQALKKAFAEHKEIQKLAQEDFIMLNLVHETTDKNLSPDGQYV 80
                         90       100       110
                 ....*....|....*....|....*....|....
gi 767944922 117 PRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPL 150
Cdd:cd02960   81 PRIMFVDPSLTVRADITGRYSNRLYTYEPADIPL 114
 
Name Accession Description Interval E-value
AGR cd02960
Anterior Gradient (AGR) family; members of this family are similar to secreted proteins ...
37-150 7.01e-86

Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.


Pssm-ID: 239258 [Multi-domain]  Cd Length: 130  Bit Score: 247.03  E-value: 7.01e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  37 GWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYV 116
Cdd:cd02960    1 GWGDDIIWVQTYEEGLYKAKKSNKPLMVIHHLEDCPHSQALKKAFAEHKEIQKLAQEDFIMLNLVHETTDKNLSPDGQYV 80
                         90       100       110
                 ....*....|....*....|....*....|....
gi 767944922 117 PRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPL 150
Cdd:cd02960   81 PRIMFVDPSLTVRADITGRYSNRLYTYEPADIPL 114
Thioredoxin_7 pfam13899
Thioredoxin-like; Thioredoxins are small enzymes that participate in redox reactions, via the ...
43-124 5.00e-29

Thioredoxin-like; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond.


Pssm-ID: 433567 [Multi-domain]  Cd Length: 84  Bit Score: 101.67  E-value: 5.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922   43 TWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNL--SPDGQYVPRIM 120
Cdd:pfam13899   1 DWLSDLEEALAAAAERGKPVLVDFGADWCFTCQVLERDFLSHEEVKAALAKNFVLLRLDWTSRDANItrAFDGQGVPHIA 80

                  ....
gi 767944922  121 FVDP 124
Cdd:pfam13899  81 FLDP 84
SoxW COG2143
Thioredoxin-related protein SoxW [Posttranslational modification, protein turnover, chaperones] ...
37-134 6.61e-09

Thioredoxin-related protein SoxW [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441746 [Multi-domain]  Cd Length: 146  Bit Score: 51.44  E-value: 6.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  37 GWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQ-- 114
Cdd:COG2143   18 AAAQEISFLLDLEEDLALAKAEGKPILLFFESDWCPYCKKLHKEVFSDPEVAAYLKENFVVVQLDAEGDKEVTDFDGEtl 97
                         90       100       110
                 ....*....|....*....|....*....|..
gi 767944922 115 ------------YVPRIMFVDPSLTVRADIAG 134
Cdd:COG2143   98 tekelarkygvrGTPTLVFFDAEGKEIARIPG 129
 
Name Accession Description Interval E-value
AGR cd02960
Anterior Gradient (AGR) family; members of this family are similar to secreted proteins ...
37-150 7.01e-86

Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.


Pssm-ID: 239258 [Multi-domain]  Cd Length: 130  Bit Score: 247.03  E-value: 7.01e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  37 GWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYV 116
Cdd:cd02960    1 GWGDDIIWVQTYEEGLYKAKKSNKPLMVIHHLEDCPHSQALKKAFAEHKEIQKLAQEDFIMLNLVHETTDKNLSPDGQYV 80
                         90       100       110
                 ....*....|....*....|....*....|....
gi 767944922 117 PRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPL 150
Cdd:cd02960   81 PRIMFVDPSLTVRADITGRYSNRLYTYEPADIPL 114
Thioredoxin_7 pfam13899
Thioredoxin-like; Thioredoxins are small enzymes that participate in redox reactions, via the ...
43-124 5.00e-29

Thioredoxin-like; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond.


Pssm-ID: 433567 [Multi-domain]  Cd Length: 84  Bit Score: 101.67  E-value: 5.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922   43 TWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNL--SPDGQYVPRIM 120
Cdd:pfam13899   1 DWLSDLEEALAAAAERGKPVLVDFGADWCFTCQVLERDFLSHEEVKAALAKNFVLLRLDWTSRDANItrAFDGQGVPHIA 80

                  ....
gi 767944922  121 FVDP 124
Cdd:pfam13899  81 FLDP 84
ERp19 cd02959
Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein ...
40-143 2.87e-23

Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.


Pssm-ID: 239257 [Multi-domain]  Cd Length: 117  Bit Score: 87.95  E-value: 2.87e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  40 DDITWVqTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNkFIMLNLM--HETTDKNLSPDGQYVP 117
Cdd:cd02959    1 DHIHWV-TLEDGIKEAKDSGKPLMLLIHKTWCGACKALKPKFAESKEISELSHN-FVMVNLEddEEPKDEEFSPDGGYIP 78
                         90       100
                 ....*....|....*....|....*.
gi 767944922 118 RIMFVDPSLTVRADIAGRYSNRLYTY 143
Cdd:cd02959   79 RILFLDPSGDVHPEIINKKGNPNYKY 104
SoxW COG2143
Thioredoxin-related protein SoxW [Posttranslational modification, protein turnover, chaperones] ...
37-134 6.61e-09

Thioredoxin-related protein SoxW [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441746 [Multi-domain]  Cd Length: 146  Bit Score: 51.44  E-value: 6.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767944922  37 GWGDDITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQ-- 114
Cdd:COG2143   18 AAAQEISFLLDLEEDLALAKAEGKPILLFFESDWCPYCKKLHKEVFSDPEVAAYLKENFVVVQLDAEGDKEVTDFDGEtl 97
                         90       100       110
                 ....*....|....*....|....*....|..
gi 767944922 115 ------------YVPRIMFVDPSLTVRADIAG 134
Cdd:COG2143   98 tekelarkygvrGTPTLVFFDAEGKEIARIPG 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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