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Conserved domains on  [gi|1370472578|ref|XP_024306791|]
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monocarboxylate transporter 4 isoform X1 [Homo sapiens]

Protein Classification

monocarboxylate transporter( domain architecture ID 13024533)

monocarboxylate transporter catalyzes the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate; similar to monocarboxylate transporter 4 (MCT4)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MCT3_4 cd17430
Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator ...
21-406 0e+00

Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 3 (MCT3) and 4 (MCT4) are also called Solute carrier family 16 members 8 (SLC16A8) and 3 (SLC16A3), respectively. They are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT3 is preferentially expressed in the basolateral membrane of the retinal pigment epithelium and plays a role in pH and ion homeostasis of the outer retina by facilitating the transport of lactate and H(+) out of the retina. Mice deficient with MCT3 display altered visual function. MCT4 is highly expressed in tissues dependent on glycolysis, and it plays an important role in lactate efflux from cells. MCT4 is expressed in neurons and astrocytes; it has been found to play a role in neuroprotective mechanism of ischemic preconditioning in animals (in the gerbil) with transient cerebral ischemia. Increased MCT4 expression has also been correlated with worse prognosis across many cancer types. MCT3/4 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340988 [Multi-domain]  Cd Length: 368  Bit Score: 651.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17430     1 GWAVLFGCFVITGFSYAFPKAVSVFFKELMREFGVGYSDTAWISSILLAMLYGTGPLCSILVNRFGCRPVMLVGGLLASL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17430    81 GMILASFCTSIIQLYLTAGVITGLGLALNFQPSLIMLGRYFDKRRPLANGLAAAGSPVFLSALSPLGQILLEEYGWRGGF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPlvvtaqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17430   161 LILGGLLLNCCTCGAVMRP------------------LDFSVFRDRGFVIYTIAKFIMVLGLFVPPIFVVNYAKDIGVPD 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17430   223 TEAAFLLSILGFIDIFARPACGVVAGLKWVRPRVVYLFSFAMLFNGLTDLCSATAADYGGLVVFCVFFGISYGMVGALQF 302
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLGN 406
Cdd:cd17430   303 EVLMAIVGTQKFSSAIGLVLLVEAVAVLIGPPSAGRLVDATKNYELIFYLAGSEVVLSALFLALGN 368
 
Name Accession Description Interval E-value
MFS_MCT3_4 cd17430
Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator ...
21-406 0e+00

Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 3 (MCT3) and 4 (MCT4) are also called Solute carrier family 16 members 8 (SLC16A8) and 3 (SLC16A3), respectively. They are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT3 is preferentially expressed in the basolateral membrane of the retinal pigment epithelium and plays a role in pH and ion homeostasis of the outer retina by facilitating the transport of lactate and H(+) out of the retina. Mice deficient with MCT3 display altered visual function. MCT4 is highly expressed in tissues dependent on glycolysis, and it plays an important role in lactate efflux from cells. MCT4 is expressed in neurons and astrocytes; it has been found to play a role in neuroprotective mechanism of ischemic preconditioning in animals (in the gerbil) with transient cerebral ischemia. Increased MCT4 expression has also been correlated with worse prognosis across many cancer types. MCT3/4 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340988 [Multi-domain]  Cd Length: 368  Bit Score: 651.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17430     1 GWAVLFGCFVITGFSYAFPKAVSVFFKELMREFGVGYSDTAWISSILLAMLYGTGPLCSILVNRFGCRPVMLVGGLLASL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17430    81 GMILASFCTSIIQLYLTAGVITGLGLALNFQPSLIMLGRYFDKRRPLANGLAAAGSPVFLSALSPLGQILLEEYGWRGGF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPlvvtaqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17430   161 LILGGLLLNCCTCGAVMRP------------------LDFSVFRDRGFVIYTIAKFIMVLGLFVPPIFVVNYAKDIGVPD 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17430   223 TEAAFLLSILGFIDIFARPACGVVAGLKWVRPRVVYLFSFAMLFNGLTDLCSATAADYGGLVVFCVFFGISYGMVGALQF 302
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLGN 406
Cdd:cd17430   303 EVLMAIVGTQKFSSAIGLVLLVEAVAVLIGPPSAGRLVDATKNYELIFYLAGSEVVLSALFLALGN 368
2A0113 TIGR00892
monocarboxylate transporter 1; [Transport and binding proteins, Carbohydrates, organic ...
8-444 0e+00

monocarboxylate transporter 1; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273325 [Multi-domain]  Cd Length: 455  Bit Score: 552.04  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578   8 EGPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGC 87
Cdd:TIGR00892   4 ALPPEGPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGC 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  88 RPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLG 167
Cdd:TIGR00892  84 RPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 168 QLLQDRYGWRGGFLILGGLLLNCCVCAALMRPL------------VVTAQPGSGP-------PRPSRRLLDLSVFRDRGF 228
Cdd:TIGR00892 164 QYLFESFGWRGSFLILGGLLLHCCVCGALMRPVgpsqrvskskskEGLPPDGSTKklskkstAEKINRFLDFSLFTHRGF 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 229 VLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLA 308
Cdd:TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLT 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 309 DLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
Cdd:TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 389 ILAGAEVLTSSLILLLGNFFCIRKKPKEPqpevAAAEEEKLHKPPADSGVDLREVE 444
Cdd:TIGR00892 404 YASGSIVVSAGLFLAIGNYINYRLLAKEQ----KAALEREGARDKKDAEGDSRESE 455
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
22-404 7.33e-32

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 125.76  E-value: 7.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  22 WAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLG 101
Cdd:COG2223     4 WRVLLLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 102 MVAASFCRSIIQvYLTTGVITGLGLALNFQPSLIMLNRYFSK-RRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:COG2223    84 LLLLALAVSYWL-LLLLGLLLGIGGGGSFAVGIALVSKWFPPdRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLllnCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKD-LGVP 259
Cdd:COG2223   163 LILGIL---LLVVAVLAWLFLRDPPAGAAAAAKASLRDQLEALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDqFGLS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 260 DTKAAFLLTILGFIDIFARPAAGFVAGlgKVRPYSVYLFSFSMFFNGLAdLAGSTAGDYGGLVVFCIFFGISYGMVGALQ 339
Cdd:COG2223   240 AATAGLLAALFALLGALGRPLGGWLSD--RIGGRRVLLIVFALMALGLL-LLALALGSLWLFLVLFLLLGLALGGGNGAV 316
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 340 FEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:COG2223   317 FALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALVALVLTLL 381
MFS_1 pfam07690
Major Facilitator Superfamily;
25-371 8.19e-22

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 96.33  E-value: 8.19e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  25 LFGCFVITGFSYAFpkAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVA 104
Cdd:pfam07690   1 LFLAAFLAALGRSL--LGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 105 ASFCRSIIQVYLTtGVITGLGLALNFQPSLIMLNRYFSK-RRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLIL 183
Cdd:pfam07690  79 LLFASSLWLLLVL-RVLQGLGAGALFPAALALIADWFPPeERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLIL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 184 GGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKA 263
Cdd:pfam07690 158 AILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLA 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 264 AFLLTILGFIDIFARPAAGFVAG-LGKVRPYSVYLFSFSMFFNGLADLAGSTAgdYGGLVVFCIFFGISYGMVGALQFEV 342
Cdd:pfam07690 238 GLLLGLGGLLGAIGRLLLGRLSDrLGRRRRLLLALLLLILAALGLLLLSLTLS--SLWLLLALLLLGFGFGLVFPALNAL 315
                         330       340
                  ....*....|....*....|....*....
gi 1370472578 343 LMAIVGTHKFSSAIGLVLLMEAVAVLVGP 371
Cdd:pfam07690 316 VSDLAPKEERGTASGLYNTAGSLGGALGP 344
 
Name Accession Description Interval E-value
MFS_MCT3_4 cd17430
Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator ...
21-406 0e+00

Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 3 (MCT3) and 4 (MCT4) are also called Solute carrier family 16 members 8 (SLC16A8) and 3 (SLC16A3), respectively. They are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT3 is preferentially expressed in the basolateral membrane of the retinal pigment epithelium and plays a role in pH and ion homeostasis of the outer retina by facilitating the transport of lactate and H(+) out of the retina. Mice deficient with MCT3 display altered visual function. MCT4 is highly expressed in tissues dependent on glycolysis, and it plays an important role in lactate efflux from cells. MCT4 is expressed in neurons and astrocytes; it has been found to play a role in neuroprotective mechanism of ischemic preconditioning in animals (in the gerbil) with transient cerebral ischemia. Increased MCT4 expression has also been correlated with worse prognosis across many cancer types. MCT3/4 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340988 [Multi-domain]  Cd Length: 368  Bit Score: 651.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17430     1 GWAVLFGCFVITGFSYAFPKAVSVFFKELMREFGVGYSDTAWISSILLAMLYGTGPLCSILVNRFGCRPVMLVGGLLASL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17430    81 GMILASFCTSIIQLYLTAGVITGLGLALNFQPSLIMLGRYFDKRRPLANGLAAAGSPVFLSALSPLGQILLEEYGWRGGF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPlvvtaqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17430   161 LILGGLLLNCCTCGAVMRP------------------LDFSVFRDRGFVIYTIAKFIMVLGLFVPPIFVVNYAKDIGVPD 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17430   223 TEAAFLLSILGFIDIFARPACGVVAGLKWVRPRVVYLFSFAMLFNGLTDLCSATAADYGGLVVFCVFFGISYGMVGALQF 302
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLGN 406
Cdd:cd17430   303 EVLMAIVGTQKFSSAIGLVLLVEAVAVLIGPPSAGRLVDATKNYELIFYLAGSEVVLSALFLALGN 368
2A0113 TIGR00892
monocarboxylate transporter 1; [Transport and binding proteins, Carbohydrates, organic ...
8-444 0e+00

monocarboxylate transporter 1; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273325 [Multi-domain]  Cd Length: 455  Bit Score: 552.04  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578   8 EGPTGVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGC 87
Cdd:TIGR00892   4 ALPPEGPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGC 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  88 RPVMLVGGLFASLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLG 167
Cdd:TIGR00892  84 RPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 168 QLLQDRYGWRGGFLILGGLLLNCCVCAALMRPL------------VVTAQPGSGP-------PRPSRRLLDLSVFRDRGF 228
Cdd:TIGR00892 164 QYLFESFGWRGSFLILGGLLLHCCVCGALMRPVgpsqrvskskskEGLPPDGSTKklskkstAEKINRFLDFSLFTHRGF 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 229 VLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLA 308
Cdd:TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLT 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 309 DLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVF 388
Cdd:TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 389 ILAGAEVLTSSLILLLGNFFCIRKKPKEPqpevAAAEEEKLHKPPADSGVDLREVE 444
Cdd:TIGR00892 404 YASGSIVVSAGLFLAIGNYINYRLLAKEQ----KAALEREGARDKKDAEGDSRESE 455
MFS_MCT2 cd17427
Monocarboxylate transporter 2 of the Major Facilitator Superfamily of transporters; ...
21-406 2.11e-126

Monocarboxylate transporter 2 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 2 (MCT2) is also called Solute carrier family 16 member 7 (SLC16A7). It is a proton-coupled transporter that facilitates the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. It transports pyruvate and lactate outside and inside of sperm and plays roles in the regulation of spermatogenesis. Genetic variation in MCT2 has functional and clinical relevance with male infertility. MCT2 is consistently overexpressed in prostate cancer (PCa) cells and its location at peroxisomes is associated with malignant transformation. MCT2 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340985 [Multi-domain]  Cd Length: 367  Bit Score: 371.45  E-value: 2.11e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17427     1 GWAVVFGAFISIGFSYAFPKAITVFFKEIQEIFHTSYSEIAWISSIMLAVMYAGGPISSILVNKYGSRPVVIAGGLLCSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17427    81 GMISASFCNSVMQLYLCIGVIGGLGLAFNLQPALTIIGKYFYKKRPIANGLAMAGSPVFLSTLAPLNQFLFNQFGWRGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLvvtaqpgsGPprpsrrlldlsVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17427   161 LILGGLLLNCCVAGSLMRPL--------GP-----------LFKHRGFLIYLSGNVIMFLGFFAPIVFLAPYAKHMGIDE 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17427   222 YSAAFLLSILAFVDMFARPSMGLVANSKWIRPRIQYFFSFAVMYNGVCHLLCPLAEDYTGLVIYAVFFGFAFGMVSSVLF 301
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLGN 406
Cdd:cd17427   302 ETLMDLVGAQRFSSAVGLVTIVECCPVLIGPPLGGKLVDVTGNYKYMYFVCGAIVIVASIWLFIGN 367
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
21-404 7.46e-115

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 341.84  E-value: 7.46e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17352     1 GWVVVFASFLVNFFTDGILNSFGVLFVELLEEFGESTSDIAWIGSLLLGVSLFSGPLSSALVNRFGCRPVAIAGGLLAAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17352    81 GLLLSSFATSLWQLYLTYGVLGGLGLGLIYSPAIVIVGQYFEKKRGLATGIAVAGSGVGTFVFPPLLRYLLDNYGWRGAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRplvvtaqpgsgpprpsrrlldlsVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17352   161 LILGGLCLNLCVCGLLLR-----------------------LLKDPTFVLLALGVSFAMLGFFVPFVYLPSYAKSLGIDE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAglGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17352   218 SDAAFLLSIIGISDIVGRILLGLLA--DKPRIGRLYLYIFTLLILGLSLLAFPLATTYVGLIVFSVLFGFCSGSYSSLTP 295
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17352   296 VILADLVGLEKLSNAYGLVLLFQGLAALVGPPIAGLLRDYTGDYDAAFYFCGACLLLSGVLLFL 359
MFS_MCT1 cd17426
Monocarboxylate transporter 1 of the Major Facilitator Superfamily of transporters; ...
21-405 1.72e-114

Monocarboxylate transporter 1 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 1 (MCT1) is also called Solute carrier family 16 member 1 (SLC16A1). It is a proton-coupled transporter that facilitates the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. It is widely expressed in many tissues its main function is to transport lactate into the cell. MCT1 deficiency has been identified as a cause of profound ketoacidosis, a potentially lethal condition caused by the imbalance between hepatic production and extrahepatic utilization of ketone bodies. This suggests that MCT1-mediated ketone-body transport is crucial in maintaining acid-base balance. MCT1 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340984 [Multi-domain]  Cd Length: 374  Bit Score: 341.47  E-value: 1.72e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17426     1 GWAVVLGAFISIGFSYAFPKSITVFFKEIEVIFNATSSEVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17426    81 GLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMIGKYFYKKRPLANGLAMAGSPVFLSTLAPLNQWFFDIFGWRGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLvvtaqpgsgPPRPsrrLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17426   161 LILGGLLLNCCVAGSLMRPI---------GPKP---FLDLTLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKQISN 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17426   229 ESAAFLLSILAFVDMVARPSMGIVANTKWVRPRIQYFFAASVLYNGVCHLLAPLSTSYVGFCIYAIFFGFAFGWLSSVLF 308
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLG 405
Cdd:cd17426   309 ETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYKYTYWACGIVLIISSIYLFIG 373
MFS_MCT6 cd17425
Monocarboxylate transporter 6 of the Major Facilitator Superfamily of transporters; ...
21-404 1.95e-99

Monocarboxylate transporter 6 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 6 (MCT6) is also called Solute carrier family 16 member 5 (SLC16A5). MCT6 has been shown to transport bumetanide, nateglinide, probenecid, and prostaglandin F2a, but not L-lactic acid, in a pH- and membrane potential-dependent manner. It may be involved in the disposition and absorption of various drugs. MCT6 is expressed in the kidney, muscle, brain, heart, pancreas, prostate, lung, and placenta. It belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340983 [Multi-domain]  Cd Length: 364  Bit Score: 302.46  E-value: 1.95e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17425     1 AWVVLLATMIVQGLTLGFPSCIGIFFTDLQKEFQASNSETSWFPSIMTAVLHAGGPLCSILVERFGCRVTVMLGGLLSGV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17425    81 GMVASSFSHSIVQLYFTAGFITGLGFCFSFQSSVTVLGFYFVRRRALANALASTGTSIGLTLWPLLSQYLLEEMGWRGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLvvtaqpgsgpprpsrrlldlsvFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17425   161 LVFGGVLLNCCVCGAVMRPF----------------------CSNTRYQIYTLGVTWMVLGFVLPLIYLVPYATSNGMDE 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17425   219 SKAALLLSILGFINIFMRPLAGLLSGLPVFKGRRIYLFSLALLLNGLSNLICAISASFPVLLVYCLLYSISMSGIGSLIF 298
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17425   299 QVLMDTVEMDRFPSALGLFTILESVTILIGPPLAGLLVDITQQYSYVFYASSIFVVSAALFMGL 362
MFS_MCT11_13 cd17423
Monocarboxylate transporters 11 and 13 of the Major Facilitator Superfamily of transporters; ...
21-403 7.90e-79

Monocarboxylate transporters 11 and 13 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 11 (MCT11) and 13 (MCT13) are also called Solute carrier family 16 members 11 (SLC16A11) and 13 (SLC16A13), respectively. They are orphan transporters whose substrates are yet to be determined. MCT11 is expressed in skin, lung, ovary, breast, lung, pancreas, retinal pigment epithelium, and choroid plexus. Genetic variants in SLC16A11, the gene encoding MCT11, are associated with type 2 diabetes in Mexican and other Latin American populations. MCT13 is expressed in breast and bone marrow stem cells. MCT11/13 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340981 [Multi-domain]  Cd Length: 383  Bit Score: 250.00  E-value: 7.90e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17423     1 GWVVVLAAFLQNALVFGVLRSFGVFFVEFVEYFEESAQRVSWITSIGLAVQQLASPVGSALSTRYGARPVVMLGGLLSSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17423    81 GFLLASFATSLLHLYLCIGLLSGLGWALVFAPTMATVSRYFSRRRSLATGLALTGVGLSSFALSPLFQLLLDTYAWRGAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSrRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17423   161 LLLSALSLHLVPCGALLRPLALPGDPPAPPRSLS-AAFGLSLLTHRAFLRYALATTLINTGYFIPYVHLVAHARALGLGE 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPysVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17423   240 YQAAFVVSVAAVADAVGRLFSGWLADLGPLRL--LHLLVLWTALTGLSLLLLPLAKVYGSLLALAVAYGFCAGALAPLVF 317
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILL 403
Cdd:cd17423   318 SVLPELVGVERVLNATGLLQMIESVGGLLGPPLSGWLRDITGDYTASFLVAGSFLLLGSLILL 380
MFS_MCT7 cd17422
Monocarboxylate transporter 7 of the Major Facilitator Superfamily of transporters; ...
21-404 1.56e-75

Monocarboxylate transporter 7 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 7 (MCT7) is also called Solute carrier family 16 member 6 (SLC16A6). Zebrafish MCT7 is required for hepatocyte secretion of ketone bodies during fasting; it has been shown to be a selective transporter of the major ketone body beta-hydroxybutyrate, whose abundance is increased during fasting. MCT7 is expressed in the brain, pancreas, muscle, and prostate. It belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340980 [Multi-domain]  Cd Length: 363  Bit Score: 240.81  E-value: 1.56e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17422     1 GWAVAVAFFFVEVFTYGVIKSFGVFFNDLMSYFNETNSRVSWIISICVFVMTFTAPLSTVLSNRFGHRPVVMVGGLLISL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17422    81 GMITASFASSIVEMYLTIGIISGLGYCFTFLPTVTILSQYFKKRRSLVTAIASTGECFAVFAFAPAFTALKESIGWRYCL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRplvvtaqpgsgpprpsrrlldlsVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17422   161 LVVGALQLNIVVCGALLR-----------------------VLKEPGFICYALFGLFATLGFFAPQLYIIPLSLSLGIDQ 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRpySVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17422   218 DWAAYMLSAMAIAELFGRISAGWVLNKCPIR--KIYIELICVILLCVVLLLFPFAYGFWSLLVCSIFYGFMFGTVAGTHI 295
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1370472578 341 EVLM--AIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17422   296 PLLAedDVVGIEKMSSALGVYVFIQSIAGLAGPPLGGVLVDWTQNYGSAFYSCAAGMALGAVFLAL 361
MFS_MCT12 cd17424
Monocarboxylate transporter 12 of the of the Major Facilitator Superfamily of transporters; ...
21-402 2.39e-59

Monocarboxylate transporter 12 of the of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 12 (MCT12) is also called Solute carrier family 16 member 12 (SLC16A12). It is a creatine transporter encoded by the cataract and glucosuria associated gene SLC16A12. A heterozygous mutation of the gene causes a syndrome with juvenile cataracts, microcornea, and glucosuria. MCT12 may function in a basolateral exit pathway for creatine in the proximal tubule. It belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340982 [Multi-domain]  Cd Length: 363  Bit Score: 198.88  E-value: 2.39e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17424     1 GWMIVAGCFLVTVCTRAVTRCISIFFVEFQNYFAQDYARTAWIHSIVDCTTMLCAPLGSLISNHLSCQVGIILGGLLAST 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17424    81 GLILSSFATSLEYLYLTLGVLTGLGFALCYSPAIAMVGKYFHKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLVVTaqpgsgpprpsrrlldlsvfrdrGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17424   161 LILGGFVLNLCVCGALMRFLLMP-----------------------DFLVLAVSVLFLAYGCSPPFVYLVPYALSVGVSH 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17424   218 QQAAFLMSILGVIDIIGNITFGWLTDRRCLKKYRYFCYLFAVGMDGLCCLFLPILKTFPLLVPFSFTFGYFDGAYVALIP 297
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLIL 402
Cdd:cd17424   298 VVTSDVVGTSSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGTYTAAFLLSGFSMIFSSLLL 359
MFS_MCT8_10 cd17420
Monocarboxylate transporters 8 and 10, and similar proteins of the Major Facilitator ...
21-404 4.18e-46

Monocarboxylate transporters 8 and 10, and similar proteins of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 8 (MCT8) and 10 (MCT10) are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT has a preference for T3 and is also a sodium-independent transporter that mediates the uptake or efflux of aromatic acids such as Phe, Tyr, and Trp, as well as L-3,4-di-hydroxy-phenylalanine. MCT8/10 and similar proteins belong to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340978 [Multi-domain]  Cd Length: 400  Bit Score: 164.62  E-value: 4.18e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGI-----GYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGG 95
Cdd:cd17420     1 GWLVMVAAFWCNGSIFGIINTYGVLHSLLLERLTKlgdpeASFKAAWVGALAMGMIFFCSPIVSCFTDKIGCRLTAFAGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  96 LFASLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYG 175
Cdd:cd17420    81 AVSFGGLLLSSFCSSIGALYFTYGIMFGCGCSFAYQPSLVILGHYFKRRLGLVNGFVTAGSSVFTVILPPLLRKLLDSYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 176 WRGGFLILGGLLLNCCVCAALMRPLVVTAQPG-SGPPR---------PSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVP 245
Cdd:cd17420   161 LEGTLRVLSLFMFVLILCSFTYRPLHPSPEDPkSKPGRrtlhsrinlFLRKIFNVEIFKRKRYVIWALGIPLALFGYFVP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 246 PVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVA----GLGKvrpysVYLFSFSMFFNGLADLAGSTAGDYGGL 321
Cdd:cd17420   241 YVHLMKFVKEEFFPGKDVNVPLMCIGITSGIGRLIFGVIAdmppGVKK-----MYLQVLSFVSIGLMSMMIPLCNSFGIL 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 322 VVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLI 401
Cdd:cd17420   316 ISVCLVMGLFDGCFISIMAPIAFELVGPSGASQAIGFLLGLMSIPMTVGPPIAGLLRDSTGSYTVAFYLAGVPPLIGSSL 395

                  ...
gi 1370472578 402 LLL 404
Cdd:cd17420   396 LFF 398
MFS_MCT5 cd17421
Monocarboxylate transporter 5 of the Major Facilitator Superfamily of transporters; ...
21-404 1.68e-41

Monocarboxylate transporter 5 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 5 (MCT5) is also called Solute carrier family 16 member 4 (SLC16A4). It is an orphan transporter expressed in the brain, muscle, liver, kidney, lung, ovary, placenta, and heart. It is a member of the monocarboxylate transporter (MCT) family, whose members include MCT1-4, which are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT5 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340979 [Multi-domain]  Cd Length: 369  Bit Score: 151.51  E-value: 1.68e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17421     1 GWMIVLHFFLVNVLVMGTLKTFGIFFVAFQEEFGGSSEQISWIGSIMSSLRLSAGPLASVACGRLGERWTSILGAFLVSA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLcALSPLGQLLQDRYGWRGGF 180
Cdd:cd17421    81 GFLISIFATSVPFLYVSMGLLVGLGFAFLYQAAAVMTAKYFKKRLATAYAIARSGMGLTF-ALAPFTQLLLDEYDWQGAL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPlvvtaqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17421   160 LIFGGIMLNLVASGMLLRP------------------IDFSLLKDPFFCIYTWSFVFSQLAYFIPYFHLVARARTLGIDP 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLTILGFIDIFARPAAGFVAGLGKVRPYSVYlfSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQF 340
Cdd:cd17421   222 MDASFIISVAGITETVAQLASGWIADQNWIKKYHYH--KAYLILCGVTNLLAPLATTYPLLMTYAVFFAIFCGGYLALLL 299
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1370472578 341 EVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17421   300 PVLVDLVGVTKVNSSLGFSMFFAGIGCLTGPPLAGWLYDYTQTYDCSFYLAGGCYLLSSVSFFL 363
MFS_MCT10 cd17464
Monocarboxylate transporter 10 of the Major Facilitator Superfamily of transporters; ...
21-402 1.91e-39

Monocarboxylate transporter 10 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 10 (MCT10) is also called Solute carrier family 16 member 10 (SLC16A10). In addition, human MCT10 is also called T-type amino acid transporter 1 (TAT1). MCT10 is a sodium-independent transporter that mediates the uptake or efflux of aromatic acids such as Phe, Tyr, and Trp, as well as L-3,4-di-hydroxy-phenylalanine. It is also a thyroid hormone transporter with preference for triiodothyronine (T3). MCT10 is expressed in intestine, kidney, liver, muscle, and placenta, and appears predominantly localized in the basolateral membrane. It belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341022 [Multi-domain]  Cd Length: 395  Bit Score: 146.48  E-value: 1.91e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSD-----TAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGG 95
Cdd:cd17464     1 GWVVMLAAMWCNGSVFGIQNAFGVLFVSLLEEFGSKDDAqmrfkTAWVGSLSMGMIFFCSPIVSVFTDLFGCRKTATGGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  96 LFASLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYG 175
Cdd:cd17464    81 AVGFVGLLASSFVSSIEPLYFTYGIIFACGCSFAYQPSLVILGHYFKKRLGLVNGIVTAGSSVFTITLPFLLRVLLDSVG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 176 WRGGFLILGGLLLNCCVCAALMRPLVVTAQPGSGPPR-----PSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVV 250
Cdd:cd17464   161 LFNTLRVLCIFMFVLFLAGFTYKPLVPMKKDKEGKKRkfkcpPLKKIFNFNIWKSTGYRIWAFGIPAALFGYFVPYVHLM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 251 SYAKDLGVPDTKAAFLLTILGFID-----IFARpAAGFVAGLGKvrpysVYLFSFSMFFNGLADLAGSTAGDYGGLVVFC 325
Cdd:cd17464   241 NHVKERFGEDVNKEVLLMCIGITSgigrlIFGR-VADYIPGVKK-----VYLQVSSFFFIGLMSMMIPLCHVFGGLIAVC 314
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1370472578 326 IFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLIL 402
Cdd:cd17464   315 LFMGLFDGCFISIMAPIAFELVGAQNVSQAIGFLLGLMSIPMTVGPPIAGFLRDRLGSYDVAFYLAGVPPIIGGIIL 391
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
21-403 3.19e-34

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 132.01  E-value: 3.19e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17355     1 GWVVLAVTFLILILSWGIRYYFGVFIIPIIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIML-NRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGG 179
Cdd:cd17355    81 GLVLLALATSLWQLYLLWGLLGGGGAGTLAAVAFATVaAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGWRTA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 180 FLILGGLLLNCCVCAALM---RPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDL 256
Cdd:cd17355   161 LLVLALLALLVLVPVLLLlrrRPADLALRAYDDASPASPGSTLKEALRSASFWLLALAFFLCGFAVVGLIVHLVPYLADR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 257 GVPDTKAAFLLTILGFIDIFARPAAGFVAG-LGKVRPYSVYLFSFSMffnGLADLAGSTAgDYGGLVVFCIFFGISYGMV 335
Cdd:cd17355   241 GISPAAAAVALALIGLFNIVGRLLSGWLGDrYSPRRLLAASYALRAL---GLALLLLLPF-PPLALLLFAALFGLGWGAT 316
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370472578 336 GALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILL 403
Cdd:cd17355   317 VPLTAALAARYFGARSYGTLFGLVFAPHQLGSALGPWLGGLLYDRTGSYTAAWALAVALGLIAALLVL 384
MFS_MCT14 cd17429
Monocarboxylate transporter 14 of the Major Facilitator Superfamily of transporters; ...
21-404 5.94e-34

Monocarboxylate transporter 14 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 14 (MCT14) is also called Solute carrier family 16 member 14 (SLC16A14). It is an orphan transporter expressed in the brain, heart, muscle, ovary, prostate, breast, lung, pancreas, liver, spleen, and thymus. It may function as a neuronal aromatic-amino-acid transporter. MCT14 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340987 [Multi-domain]  Cd Length: 361  Bit Score: 130.72  E-value: 5.94e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17429     1 AWMVVLSSFIVHILVMGSQMALGILNMEWLEEFQQSRGLTAWISSLSMGITLIVGPFIGLFINTCGCRKTAIIGGILTSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17429    81 GWVLSAYATNVHYLFISFGVTAGIGSGMAYLPAVVMVGQYFQKRRALAQGLSTTGTGFGTFLMTILLKYLCAEFGWRNAM 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRplvvtaqpgsgpprpsrrlldlsVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17429   161 FIQGAVSLNLCVCGALMR-----------------------LFTNKVFVAFIFWALFAYCSFVIPFIHLPEIVKLYGLSE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAFLLT-ILGFIDIFARPAAGFVAGLGKVRPYSVYLfsFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVgALQ 339
Cdd:cd17429   218 QNDKFPLTsIIAIVHIFGKVILGIICDLPCISVWNVFI--LANFTLGVCILILPLMHTYTGLAIVCALIGFSSGYF-SLM 294
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 340 FEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17429   295 PVVTEDLVGIKNLANAYGIIICANGISALLGPPFAGWIYDITQKYDFSFYVCGLLYMVGIICLLL 359
MFS_MCT9 cd17428
Monocarboxylate transporter 9 of the Major Facilitator Superfamily of transporters; ...
21-404 2.94e-32

Monocarboxylate transporter 9 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 9 (MCT9) is also called Solute carrier family 16 member 9 (SLC16A9). It is an orphan transporter that is expressed in a number of tissues including intestine and kidney. A missense variant of MCT9 (K258T) is associated with significant increase in susceptibility to renal overload (ROL) gout with intestinal urate underexcretion. This suggests that MCT9 may have a role in intestinal urate excretion; it is possible that it transports urate. MCT9 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340986 [Multi-domain]  Cd Length: 361  Bit Score: 126.08  E-value: 2.94e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17428     1 GWVIVFVSFLAQFLCYGSPLAVGVLYPEWLDAFGEGKGMTAWVGSLASGVGLIASPVCSACVSSFGARPVTIFSGFMVAG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17428    81 GLMLSAFAPNIYFLIFSYGIVVGLGCGLVYAATVTITCQYFDKRRGLALGLISTGSSVGLFIYAALQRELIELYGLDGCL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRplvvtaqpgsgpprpsrrlldlsVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPD 260
Cdd:cd17428   161 LIVGALALNLLACGSLMR-----------------------LFKNRVFSALFIAILLFDIGAFPPSLLMEDVARSENIIE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 261 TKAAF-LLTILGFIDIFARPAAGFVAGLGKVRpySVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQ 339
Cdd:cd17428   218 EIALIpLVSIIGITTAIGKLILGVLADFKWVN--SLYLYVLTLIGMGAALLAIPFAKSYLTLAVLSAILGFLSGNWSIFP 295
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 340 FeVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17428   296 Y-VTTKTVGIEKLGHAYGILMFFAGLGNSLGPPIVGWFYDWTQTYDIAFYFSGFCVLLGGFLLLL 359
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
22-404 7.33e-32

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 125.76  E-value: 7.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  22 WAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLG 101
Cdd:COG2223     4 WRVLLLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 102 MVAASFCRSIIQvYLTTGVITGLGLALNFQPSLIMLNRYFSK-RRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:COG2223    84 LLLLALAVSYWL-LLLLGLLLGIGGGGSFAVGIALVSKWFPPdRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLllnCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKD-LGVP 259
Cdd:COG2223   163 LILGIL---LLVVAVLAWLFLRDPPAGAAAAAKASLRDQLEALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDqFGLS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 260 DTKAAFLLTILGFIDIFARPAAGFVAGlgKVRPYSVYLFSFSMFFNGLAdLAGSTAGDYGGLVVFCIFFGISYGMVGALQ 339
Cdd:COG2223   240 AATAGLLAALFALLGALGRPLGGWLSD--RIGGRRVLLIVFALMALGLL-LLALALGSLWLFLVLFLLLGLALGGGNGAV 316
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 340 FEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:COG2223   317 FALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALVALVLTLL 381
MFS_MCT8 cd17465
Monocarboxylate transporter 8 of the Major Facilitator Superfamily of transporters; ...
21-403 8.51e-29

Monocarboxylate transporter 8 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 8 (MCT8) is also called Solute carrier family 16 member 2 (SLC16A2) or X-linked PEST-containing transporter. MCT8 is a very active and specific thyroid hormone transporter which stimulates the cellular uptake of thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). Inactivating mutations in SLC16A2, the gene that encodes MCT8, lead to an X-linked syndrome with severe neurological impairment known as Allan-Herndon-Dudley syndrome (AHDS). AHDS is characterized by congenital hypotonia that progresses to spasticity with severe psychomotor delays, spastic paraplegia and dystonic movements, global developmental delay, and profound intellectual disability. MCT8 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341023 [Multi-domain]  Cd Length: 367  Bit Score: 116.44  E-value: 8.51e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYS-----DTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGG 95
Cdd:cd17465     1 GWVVVFAATWCNGSIFGIQNSFGILYVMLLNEQEDQKDqavqfKTAWVGALAMGMIFFCSPVVSIFTDRFGCRKTAMGGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  96 LFASLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYG 175
Cdd:cd17465    81 AVAFIGLLSSSFTKSLGLRYFTYGILFGCGSSFAFQPSLVILGHYFRRRLGLANGVVTAGSSLFSMLLPFLLKMVGDAIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 176 WRGGFLilgglllnccVCAALMRPLVVTAqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKD 255
Cdd:cd17465   161 LAHTFQ----------VLSLFMFIQIFLS-------------LTYKVFRRKTYRIWAFGIATAVLGYFVPYVHLMKYVEE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 256 LGVPDTKAAFLLTILGFIDIFARPAAG----FVAGLGKVrpysvYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Cdd:cd17465   218 EFKENKREWVLLVCIGASSGIGRLMSGkigdLIPGLKKI-----YLQVASFLLLGIMSMMIPLCQVFEGVIVVCLFLGLC 292
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1370472578 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILL 403
Cdd:cd17465   293 DGCFITIMAPIAFELVGPMQASQAIGYLLGLMAIPMTAGPPIAGLLHDYFGSYHVAFYLAGVPPIIGGTVLF 364
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
14-404 1.43e-27

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 113.04  E-value: 1.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  14 KAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLV 93
Cdd:COG2271     1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  94 GGLFASLGMVAASFCRSIIQVYLTTgVITGLGLALNFQPSLIMLNRYFS-KRRPMANGLAAAGSPVFLCALSPLGQLLQD 172
Cdd:COG2271    81 GLLLWGLATLLFGFATSFWQLLLLR-FLLGLGEAGFFPAALKLIAEWFPpKERGRALGIFNAGGPLGGALAPPLLGWLLA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 173 RYGWRGGFLILGGLllncCVCAALMRplvvtaqpgsgpprpsrrlldlsvfrdrgFVLYAVAASVMVLGLFVPPVFVVSY 252
Cdd:COG2271   160 AFGWRAAFLILGLP----GLLLALLR-----------------------------FWLLALAYFLVYFALYGFLTWLPTY 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 253 AKD-LGVPDTKAAFLLTILGFIDIFARPAAGFVAglGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGIS 331
Cdd:COG2271   207 LVEvRGLSLAQAGLLLSLPFLAGIVGSLLGGWLS--DRLGRRRKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFG 284
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370472578 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHvYMYVFILAGAEVLTSSLILLL 404
Cdd:COG2271   285 LGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATG-YQAAFLLLAALALLAALLALL 356
MFS_MCT_like cd17314
Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator ...
21-405 5.54e-27

Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator Superfamily; The group is composed of the Monocarboxylate transporter (MCT) family in animals and similar transporters from fungi, plants, archaea, and bacteria. MCT is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCTs have been found to facilitate the transport across the plasma membrane not only of monocarboxylates (MCT1-4), but also thyroid hormones (MCT8/10), and aromatic acids (MCT10). Yeast MCT homologous (Mch) proteins are not involved in the uptake of monocarboxylates; their substrates are not known. The MCT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340872 [Multi-domain]  Cd Length: 385  Bit Score: 111.73  E-value: 5.54e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  21 GWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASL 100
Cdd:cd17314     1 RWFVLYVSFLLSAMSTGFILSWSLFYQPWQDAFGYSSSQIATAASLSNLGMLLTQPILGFIADSFGPRPLMALAGIMVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 101 GMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGF 180
Cdd:cd17314    81 GYTYLSYVFNSFPLSYACFVFIGAGTGILYGSAVLVTTQYFPDTKGLALGLPTTGYSLGLVLGSPLLRILWVFYGLALVY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 LILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDL-GVP 259
Cdd:cd17314   161 TILGILAAIVLSVVSLLGFKEPPDNQARLHVQKKKTQTMGEIFRDKVFWILFIAIFLVLIGGFLFIANMASLVRSLqLDA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 260 DTKAAFLLTILGFIDIFARPAAGFVAGLGKVRpysVYLFSFSMFFNGLADLAGSTAGDYG--GLVVFCIFFGISYGMVGA 337
Cdd:cd17314   241 PSFVTKLMSIYGLFNAFGRLLWGIVADFFGGR---LSTLSILLTILGLGLCAFLFLLKMTpvGLVLTGSLLGFSYGGLFT 317
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370472578 338 LQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLLG 405
Cdd:cd17314   318 VYPATVSTVFGTESFATLYGILLFAPAIGSILGPMLGAKFYDRTPSYISAVYIYAVIVFLASAILLAV 385
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
15-362 6.80e-22

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 96.58  E-value: 6.80e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  15 APDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVG 94
Cdd:COG2814     2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  95 GLFASLGMVAASFCRSIIQVYLTTgVITGLGLALNFQPSLIMLNRYFS-KRRPMANGLAAAGSPVFLCALSPLGQLLQDR 173
Cdd:COG2814    82 LLLFALGSLLCALAPSLWLLLAAR-FLQGLGAGALFPAALALIADLVPpERRGRALGLLGAGLGLGPALGPLLGGLLADL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 174 YGWRGGFLILGGlllnCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLsvFRDRGFVLYAVAASVMVLGLFVPPVFVVSYA 253
Cdd:COG2814   161 FGWRWVFLVNAV----LALLALLLLLRLLPESRPAARARLRGSLREL--LRRPRLLLLLLLAFLLGFGFFALFTYLPLYL 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 254 KD-LGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKVRPysvyLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISY 332
Cdd:COG2814   235 QEvLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRR----LLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGF 310
                         330       340       350
                  ....*....|....*....|....*....|
gi 1370472578 333 GMVGALQFEVLMAIVGTHKFSSAIGLVLLM 362
Cdd:COG2814   311 GLLFPLLQALVAELAPPEARGRASGLYNSA 340
MFS_1 pfam07690
Major Facilitator Superfamily;
25-371 8.19e-22

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 96.33  E-value: 8.19e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  25 LFGCFVITGFSYAFpkAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVA 104
Cdd:pfam07690   1 LFLAAFLAALGRSL--LGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 105 ASFCRSIIQVYLTtGVITGLGLALNFQPSLIMLNRYFSK-RRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLIL 183
Cdd:pfam07690  79 LLFASSLWLLLVL-RVLQGLGAGALFPAALALIADWFPPeERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLIL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 184 GGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKA 263
Cdd:pfam07690 158 AILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLA 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 264 AFLLTILGFIDIFARPAAGFVAG-LGKVRPYSVYLFSFSMFFNGLADLAGSTAgdYGGLVVFCIFFGISYGMVGALQFEV 342
Cdd:pfam07690 238 GLLLGLGGLLGAIGRLLLGRLSDrLGRRRRLLLALLLLILAALGLLLLSLTLS--SLWLLLALLLLGFGFGLVFPALNAL 315
                         330       340
                  ....*....|....*....|....*....
gi 1370472578 343 LMAIVGTHKFSSAIGLVLLMEAVAVLVGP 371
Cdd:pfam07690 316 VSDLAPKEERGTASGLYNTAGSLGGALGP 344
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
41-393 1.12e-21

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 96.48  E-value: 1.12e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  41 AVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTGV 120
Cdd:COG2807    36 SVGPLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTAL 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 121 ItGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLllncCVCAALMRPL 200
Cdd:COG2807   116 I-GAGIAVGNVLLPGLIKRWFPDRVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALL----ALLALLLWLP 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 201 VVTAQPGSGPPRPSRRLLdLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPA 280
Cdd:COG2807   191 LLRRRPAAAAAAPAAASL-RSLWRSPLAWLLTLFFGLQSLLYYAVVAWLPPILRDAGLSAATAGLLLSLFQLAGIPGSLL 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 281 AGFVAG-LGKVRPysVYLFSFSMFFNGLADLAGSTAgdyGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAI-GL 358
Cdd:COG2807   270 VPLLADrLGDRRP--LLLLLGLLGLAGLLGLLLAPG---SLPWLWAVLLGLGQGGLFPLALTLIGLRARTPAEAAALsGM 344
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1370472578 359 VLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGA 393
Cdd:COG2807   345 AQSVGYLLAALGPLLVGALHDATGSWTAALLLLAA 379
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
25-403 1.71e-19

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 89.79  E-value: 1.71e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  25 LFGCFVITGFSYAfpkAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVA 104
Cdd:cd06174     1 LLLGFFLTGLARG---LISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 105 ASFCRSIIQVYLtTGVITGLGLALNFQPSLIMLNRYFSKR-RPMANGLAAAGSPVFLCALSPLGQLLQDR--YGWRGGFL 181
Cdd:cd06174    78 FAFAPSFWLLLL-GRFLLGLGSGLIDPAVLALIADLFPEReRGRALGLLQAFGSVGGILGPLLGGILASSlgFGWRAVFL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 182 ILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDL--SVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVP 259
Cdd:cd06174   157 IAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLlkRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 260 DTK-AAFLLTILGFIDIFARPAAGFVAGLGKVRPysvYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGAL 338
Cdd:cd06174   237 SVAvAGLLLSLFGLAGALGSLLLGLLSDRLIGRK---PLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPL 313
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 339 QFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILL 403
Cdd:cd06174   314 SFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLAAILLL 378
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
22-404 2.83e-18

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 86.12  E-value: 2.83e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  22 WAVLFGCFVI---TGFSYAFpkavSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFA 98
Cdd:cd17353     3 WLVLLGAVLMhliLGYQYAW----SVFNPPLSSALGWSLASVALAFTLTIVFLAISAPFAGRLVDRGGPRKAILIGGILF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  99 SLGMVAASFCRSIIQVYLTTGVITGLGLALNFQPSLIMLNRYFSKRRPMANGLAAAG---SPVFLCALSplGQLLQDRYG 175
Cdd:cd17353    79 GLGFILSAFAISLPLLFLGYGVLGGIGAGIGYITPVSTAVKWFPDKRGLATGIVIAGfglGSLIFSPLI--AYLINTVGV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 176 WRGGFLILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFR-------DRGFVLYAVAASVMVLGLfvppvF 248
Cdd:cd17353   157 PTTFLILGIIFLIIIVIGAFLIRDPPKGWVPPGVDPLANNAENSPRDYTpremlrtPTFWLLWLMFFLNATAGL-----M 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 249 VVSYAKDLG-----VPDTKAAFLLTILGFIDIFARPAAGFVAglGKVRPYSVYLFSFSMffNGLADLAGSTAG-DYGGLV 322
Cdd:cd17353   232 LIGQAKPIGqefagLDAGIAALAVSILSIFNGGGRPFWGWLS--DKIGRKNTLSIAFLI--QGVAMFLLPFIGsVAVLFV 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 323 VFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGkLLDATHVYMYVFILAGAEVLTSSLIL 402
Cdd:cd17353   308 LGVALIGFCYGGGFALFPALTADFFGTKNAGTNYGLLYTAKGVGGLIGPIIAA-YVLYTGGYNAAFIIAAALSLVALALA 386

                  ..
gi 1370472578 403 LL 404
Cdd:cd17353   387 LL 388
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
49-405 4.70e-12

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 67.22  E-value: 4.70e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  49 LIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTgVITGLGLAL 128
Cdd:cd17325    22 YAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLAR-FLQGLASAA 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 129 NFQPSLIML-NRYFSKRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLLNCCVCAALMRPLVVTAQPG 207
Cdd:cd17325   101 VWPAAMALIaDIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLLPEPRPPPNK 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 208 SGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGL-FVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAg 286
Cdd:cd17325   181 RAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFgALEPFLPLYAAELGGLSPAQIGLLFGAQGLASALSQPPAGKLS- 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 287 lgkVRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVA 366
Cdd:cd17325   260 ---DRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLG 336
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1370472578 367 VLVGPPSGGKLLDATHVYmYVFILAGAEVLTSSLILLLG 405
Cdd:cd17325   337 MVLGPLLGGFLYDAFGFA-TPFLAAAALLLLAAVLFLLL 374
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
84-403 7.95e-11

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 63.41  E-value: 7.95e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  84 RFGCRPVMLVGGLFASLGMVAASFcrsiIQVYLTTGVI---TGLGLAlNFQPS---LIMlnRYFSKR-RPMANGLAAAGS 156
Cdd:cd17475    57 RFGERRVLAVGLLLMGAAALLMAL----VGSYPVLLVLlflVGAGYG-SVQPGggrAIM--RWFPPReRGLAMGIRQTGV 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 157 PV--FLCALspLGQLLQDRYGWRGGFLILGGLLLNCCVCAALM--RPLVVTAQPGSGPPRPSRRLldlSVFRDRGFVLYA 232
Cdd:cd17475   130 PLggALAAA--LLPPLALHYGWRAAFVVAGLVSILAAVLFWLFyrEPPAASAATESASTLLRSLK---EVLRNRDVWLIA 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 233 VAASVMVLGLFVPPVFVVSYAKD-LGVPDTKAAFLLTILGFIDIFARPAAGFVA---GLGKVRPYSVYL-FSFSMFFNGL 307
Cdd:cd17475   205 IAGALLVAPQFALLTFLLLFLHDhLGLSVVAAGALLAVAQLGGALGRIGLGRVSdrvFGGRRRPVLVITaAIAAAALLVL 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 308 ADLAGSTAgdYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYV 387
Cdd:cd17475   285 SLLSPGTP--LWLLVLLLILLGLFAIGWNGLYLTLVAESAGPEQAGTALGLANTINFIGIAIGPPLFGLLVDATHSYAPA 362
                         330
                  ....*....|....*.
gi 1370472578 388 FILAGAEVLTSSLILL 403
Cdd:cd17475   363 WLALALLLVLAALLLL 378
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
223-432 1.60e-08

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 56.14  E-value: 1.60e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 223 FRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAG-LGKVRpysvyLFSFS 301
Cdd:COG2814     7 RRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADrFGRRR-----VLLLG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 302 MFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDAT 381
Cdd:COG2814    82 LLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLF 161
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1370472578 382 HvYMYVFILAGAevltSSLILLLGNFFCIRKKPKEPQPEVAAAEEEKLHKP 432
Cdd:COG2814   162 G-WRWVFLVNAV----LALLALLLLLRLLPESRPAARARLRGSLRELLRRP 207
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
48-402 1.87e-07

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 52.94  E-value: 1.87e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  48 ELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIqVYLTTGVITGLGLA 127
Cdd:cd17324    24 DIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFA-LLLLARALAGLAHG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 128 LNFQPSLIMLNRYFSK-RRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLlncCVCAALMRPLVVTAQP 206
Cdd:cd17324   103 GFWAIAAAYAADLVPPeKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLA---LLAALLLWRLLPSLPP 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 207 GSGPPRPSRRLLdLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDL-GVPDTKAAFLLTILGFIDIFARPAAGFVA 285
Cdd:cd17324   180 KKPGSLGLLSSL-LLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVpGFSSSAIIGLLLLFGVAGVVGSPLAGRLA 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 286 GLGKVRPysvyLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKfSSAIGLVLLMEAV 365
Cdd:cd17324   259 DRGGRRA----LLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAPEAR-GLASSLYLAAYNL 333
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1370472578 366 AVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLIL 402
Cdd:cd17324   334 GGALGAALGGLVLDHGGWAGVGWVGAALLLLALLLAL 370
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
23-416 1.94e-07

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 52.93  E-value: 1.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  23 AVLFGCFVITGFSYAfpkAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGM 102
Cdd:COG0738    11 IAIYLLFFLWGFATA---LWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGL 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 103 VAASFCRSIIqVYLTTGVITGLGLALnFQPSL-----IMLNRYFSKRRPMA---NGLAAAGSPVFLCALSPLGQLLQdry 174
Cdd:COG0738    88 LLFALAPSYP-LLLLALFLLGLGLGL-LDVAAnpyvaALGPETAASRLNLLhafFSLGALLGPLLGGLLILLGLSLS--- 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 175 gWRGGFLILGGLLLnccVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAK 254
Cdd:COG0738   163 -WHLPYLILAVLLL---LLALLFLRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLLGGLAIFLYVGAEGAIGDWLPLYLK 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 255 D-LGVPDTKAAFLLTILGFIDIFARPAAGFVagLGKVRPysVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYG 333
Cdd:COG0738   239 DvLGLSEATAALGLSLFWGGMTIGRFLGGFL--LKRFGP--VRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGLS 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 334 MVGALQFEVLMAIVGTHKfSSAIGLVLLMEAVAVLVGPPSGGKLLDATHV-YMYVFILAGAevltssLILLLGNFFCIRK 412
Cdd:COG0738   315 LMFPTIFSLALDGLGKRT-AAAVSAVLIMGIVGGAIGPPLIGFLADAFGLrAAFLVPLVCY------LLILLLALALKRK 387

                  ....
gi 1370472578 413 KPKE 416
Cdd:COG0738   388 RRKK 391
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
49-404 3.85e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 51.81  E-value: 3.85e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  49 LIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIqVYLTTGVITGLGLAL 128
Cdd:cd17504    22 IQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLP-VLIAGRALQGIGGAV 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 129 nFQPSLIMLNRYFSKRR-PMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGlllnCCVCAALMRPLVvtaqpg 207
Cdd:cd17504   101 -FPLAFALVREEFPPERvPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAP----VAVLLAALVPLI------ 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 208 sgpprpsrrllDLSVFRDRGFVLYAVAASVMVLGLF-----VPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAG 282
Cdd:cd17504   170 -----------DLRLLRRRNVLLANITALLAGFGMFmvfqlLPQLLQLPTPTGFGLGITEAGLLLLPGALVMLIAGPLAG 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 283 FVAglGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYgGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLM 362
Cdd:cd17504   239 RLI--ARVGPRRVLLIGLVISAVGLLLLALLHSSLW-ALVVALLLIGIGLGLAFASLPNIVVESVPPDRTGIATGMNTVL 315
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1370472578 363 EAVAVLVGPPSGGKLLDATHV------------YMYVFILAGAEVLTSSLILLL 404
Cdd:cd17504   316 RTIGSAIGPAIAGAILTTYTVsitsggvptegaYVLAFLIGAALALAALLLSLL 369
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
84-382 5.42e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 51.83  E-value: 5.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  84 RFG-CRPVMLVGGLFASLGMVAASFCRSIIQV-----YLTTGVITGLGLALNFQPSLIMLNRYFS--KRRPMANGLAAAG 155
Cdd:COG2211    76 RWGrRRPWILIGAIPLALSFVLLFTAPDLSPTgkliyALVTYLLLGLAYTLVNIPYSALGAELTPdyEERTRLSSWRFAF 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 156 SPVFLCALSPLGQLLQDRYGWRGGFLILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDL--SVFRDRGFVLYAV 233
Cdd:COG2211   156 AGLGGLLASVLPPPLVAAFGGDAALGYRLTALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLKESlkALLKNRPFLLLLL 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 234 AASVMVLGLFVPPVFVVSYAKD-LGVPDTKAAFLLTILGFIDIFARPAAGFVAG-LGKVRpysVYLFSFSMFFNGLADLA 311
Cdd:COG2211   236 AYLLFFLALALVAALLLYYFKYvLGLSAALVGLLLALYFLAALLGAPLWPRLAKrFGKKK---AFIIGLLLAALGLLLLF 312
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1370472578 312 GSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIV-------GTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATH 382
Cdd:COG2211   313 FLGPGNLWLLLVLAALAGIGLGAILVLPWAMLADVVdydewktGRRREGLYFGIFTFAIKLGQALAGALAGLLLALFG 390
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
41-335 8.38e-07

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 51.04  E-value: 8.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  41 AVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYL---- 116
Cdd:cd17503    14 IVNVALPTIMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIfril 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 117 ---TTGVITGLGLAlnfqpslIMLNRYFSKRRPMANGLAAAGSpVFLCALSP-LGQLLQDRYGWRGGFLILGGLllncCV 192
Cdd:cd17503    94 qgfGGGVLIPLAQT-------ILLRIYPPEKRGAAMGLVGLVI-LLAPAIGPtLGGWLTDNLSWRWIFYINLPI----GI 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 193 CAALMRPLvvtaqpgsgpprpsrrlLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKD-LGVPDTKAAFLLTILG 271
Cdd:cd17503   162 LALLLAPL-----------------LDLRLFKDRNFTLGLLLSFLLGLGLFGAMFLLPLYLQNvLGYSAFESGLVLAPGG 224
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 272 FIDIFARPAAGFVagLGKVRPYSVYLFSFSMFFNGLADLAGSTAG-DYGGLVVFCIFFGISYGMV 335
Cdd:cd17503   225 LASAILSPLVGRL--LDKFGPRLLLLAGLLLLALGTLLLAFLTPDtSLWLIILPLFIRGLGMGLV 287
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
22-404 4.25e-06

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 48.72  E-value: 4.25e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  22 WAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLG 101
Cdd:cd17319     2 WRIIPLLFLAYVINYLDRVNISVAAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 102 MVAASFCRSIIQVYLTTGVItGLGLALNFQPSLIMLNRYFSKR-RPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGf 180
Cdd:cd17319    82 TALTGFATSLTSLYVLRFLL-GVAEAGFFPGAIKALAEWFPAReRGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWA- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 181 lilgglllnccvcaalmrpLVVTAQPGSGpprpsrrLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKD-LGVP 259
Cdd:cd17319   160 -------------------FIIEGLLGLL-------LAVLWWFYLRQVWGLALGYFGINYALYGLLTWLPTYLKQaRGFS 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 260 DTKAAFLLTILGFIDIFARPAAGFVAG---LGKVRPYSVYLFSFSMFFNGLADLAGSTAgdyggLVVFCIFFG-ISYGMV 335
Cdd:cd17319   214 LKQVGLLAAIPFLAGAIGMILGGRLSDrllRGARRLVIIIGLLLAAVGLLLAYLTTSPV-----VAVILLSLAgFGIGAA 288
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1370472578 336 GALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd17319   289 SPVFWSLPADLLPGEAAATAGGLINSGGNLGGFVAPLLIGYLVDATGSYTAAFLFLAAVALLAALLVLL 357
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
232-417 6.76e-06

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 47.96  E-value: 6.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 232 AVAASVMVLGLFVPpvFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAG-LGKVRPysvylFSFSMFFNGLADL 310
Cdd:cd17325     4 ALFLDMLGYGIIIP--ILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDrFGRKRL-----LLLGLLLLAVSTL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 311 AGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGkLLDATHVYMYVFIL 390
Cdd:cd17325    77 LFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGG-LLADALGYRAPFLV 155
                         170       180
                  ....*....|....*....|....*..
gi 1370472578 391 AGAevltSSLILLLGNFFCIRKKPKEP 417
Cdd:cd17325   156 CAA----LALLALVLALLLLPEPRPPP 178
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
252-404 2.27e-05

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 46.43  E-value: 2.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 252 YAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVagLGKVRPYSVYLFSFSMFfnGLADLAGSTAGDYGGLVVFCIFFGIS 331
Cdd:cd17489    22 YAHDLGGSEAVAGLVVGLFTLAALLARPFAGRL--LDRFGRKRLLLIGLLIF--ALATLLYLLATSVALLLVLRLIHGIG 97
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1370472578 332 YGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMyVFILAGAEVLTSSLILLL 404
Cdd:cd17489    98 WGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAV-LFIVAAVLALLALLLVFL 169
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
200-403 2.33e-05

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 46.38  E-value: 2.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 200 LVVTAQPGSGPPRPSRRLLDLSVFrDRGFVLYAVAASVMVLGLFVPPvFVVSYAKDLGVPDTKAAFLLTILGFIDIFARP 279
Cdd:cd17370   175 FVVKEYPRPPKLRKKSKKTSLKKL-PKAFWLYLLAVALFALGNFSFA-FLILRAQELGLSAALIPLLYALFNLVYALAAY 252
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 280 AAGFVAGlgKVRPYSVYLFSFSMFFngLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLV 359
Cdd:cd17370   253 PAGRLSD--RIGRKKLLILGYLSLA--LAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTAYGLF 328
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1370472578 360 LLMEAVAVLVGPPSGGKLLDATHvYMYVFILAGAEVLTSSLILL 403
Cdd:cd17370   329 NTVVGIGWLLASLIAGYLWDLIS-PSAAFLFSAVLALIALLLLL 371
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
74-404 2.95e-05

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 46.03  E-value: 2.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  74 TGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVyLTTGVITGLGLALNFQPSLIMLNRYFS-KRRPMANGLA 152
Cdd:cd17473    51 FAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYAL-LASRALLGIGVAGIMTLATALIGDYFEgEERAKMLGLQ 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 153 AAGSPVFLCALSPLGQLLQDrYGWRGG-FLILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFrdrgfvLY 231
Cdd:cd17473   130 SAAMSLGGVVFLLLGGALAE-IGWRAPfLVYLLALPVLILVLLFLPEPARKSKSAASPGAATAAALPWKRVL------PI 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 232 AVAASVMVLGLFVPPVFVVSYAKDLGVPDTK-AAFLLTILGFIDIFARPAAGFVAGlgKVRPYSVYLFSFSMFFNGLADL 310
Cdd:cd17473   203 YFLAFLAMLLFYVIPIQLPFLLQERGGGSAAlIGLALAIASLAGAIGALLFGRLKR--RLGKRRLLAIGFALMALGFLLL 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 311 AgsTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFIL 390
Cdd:cd17473   281 A--LASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGAFLI 358
                         330
                  ....*....|....
gi 1370472578 391 AGAEVLTSSLILLL 404
Cdd:cd17473   359 LGVLALVLAIVLLL 372
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
231-432 3.14e-05

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 45.88  E-value: 3.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 231 YAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKVRPysvyLFSFSMFFNGLADL 310
Cdd:cd06174     1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRP----VLLLGLLLFALGAL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 311 AGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDAthvYMYVFIL 390
Cdd:cd06174    77 LFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASS---LGFGWRA 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1370472578 391 AGAEVLTSSLILLLGNFFCIRKKPKEPQPEVAAAEEEKLHKP 432
Cdd:cd06174   154 VFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKL 195
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
75-404 5.64e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 45.30  E-value: 5.64e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  75 GPLCSVCVNRFGCRPVMLV-----GGLFASLGMVAASFCRSIIQVYLTTgVITGLGLALNFQPSLIMLNRYFSKRR-PMA 148
Cdd:cd06173    51 SPFAGVLADRFDRRRLLILadllrALLAAVLALLALLGSLSLWLLLVLA-FLLGIASAFFGPARQALLPELVPKEQlVRA 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 149 NGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLLDLSVFRDRGF 228
Cdd:cd06173   130 NALNSLATQLARIIGPALGGLLVALLGPGGAFAINALSFLLSALLLLFIRRPPPAAPGESSSLLLRDLREGLRYLRRSPL 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 229 VLYAVAASVMVLGLFVPP-VFVVSYAKD-LGVPDTKAAFLLTILGfIDIFArpAAGFVAGLGKVRPYsVYLFSFSMFFNG 306
Cdd:cd06173   210 LRLLLLALALFALLGGALtVLLPLLAKEvLGGGAAGYGLLLAAFG-VGALL--GALLLGRLSKRRRR-GRLLLIGALLLG 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 307 LADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVyMY 386
Cdd:cd06173   286 LALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGL-SA 364
                         330
                  ....*....|....*...
gi 1370472578 387 VFILAGAEVLTSSLILLL 404
Cdd:cd06173   365 VFLLAGALLLLAALLLLL 382
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
41-304 7.14e-05

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 44.42  E-value: 7.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  41 AVSVFFKELIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTtGV 120
Cdd:COG0477    32 IVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAA-RA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 121 ITGLGLALNFQPSLIMLNRYFS-KRRPMANGLAAAGSPVFLCALSPLGQLLQDRYGWRGGFLILGGLLLNCCVCAALMRP 199
Cdd:COG0477   111 LQGIGAGGLMPGALALIAELFPaRERGRALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLINAPLGLLALVLRLRLPE 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 200 LVVTAQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARP 279
Cdd:COG0477   191 SRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALLLLLALLLLALLLLLALLLLAALLLLLLLLL 270
                         250       260
                  ....*....|....*....|....*
gi 1370472578 280 AAGFVAGLGKVRPYSVYLFSFSMFF 304
Cdd:COG0477   271 LLALLLALLLLLLLLLLLLLLALLL 295
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
14-378 9.15e-05

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 44.65  E-value: 9.15e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  14 KAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIQEFGIGYSDTAWISSI-LLAMLYGT---GPLCsvcvNRFGCRP 89
Cdd:TIGR00895   8 KQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAgLIGMAFGAlffGPLA----DRIGRRR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  90 VMLVGGLFASLGMVAASFCRSIIQVyLTTGVITGLGLALNFqPSLIMLNRYFS--KRRPMANGLAAAGSPVFLCALSPLG 167
Cdd:TIGR00895  84 VLLWSILLFSVFTLLCALATNVTQL-LILRFLAGLGLGGLM-PNLNALVSEYApkRFRGTAVGLMFCGYPIGAAVGGFLA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 168 QLLQDRYGWRGGFLILGglllnccVCAALMRPLVVTAQP------GSGPPRPSRRLLDLSVFRDRGFVLYAVA------- 234
Cdd:TIGR00895 162 GWLIPVFGWRSLFYVGG-------IAPLLLLLLLMRFLPesidflVSKRPETVRRIVNAIAPQMQAEAQSALPeqkstqg 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 235 -ASVMVLGLFVP------PVFVVSYA-----------------KDLGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKV 290
Cdd:TIGR00895 235 tKRSVFKALFQGktaritVLLWLLYFmllvgvyfltnwlpklmVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGP 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 291 RPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVL-MAIVGThkfssAIGLVLLMEAVAVLV 369
Cdd:TIGR00895 315 RVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYpTAIRAT-----GVGWAIGIGRLGAII 389

                  ....*....
gi 1370472578 370 GPPSGGKLL 378
Cdd:TIGR00895 390 GPILAGYLL 398
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
81-404 1.58e-04

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 43.74  E-value: 1.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  81 CVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVYLTTgVITGLGLALNFQPSLIMLNRYF-SKRRPMANGLAAAGSPVF 159
Cdd:cd17489    54 LLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLR-LIHGIGWGAFTTAAATLVADIIpPSRRGEGIGYYGLATTLA 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 160 LCALSPLGQLLQDRYGWRGGFLILGGLLLNCCVCAALMRPlvvtaQPGSGPPRPSRRLLDLSVFRDRGFVLYAVAASVMV 239
Cdd:cd17489   133 MALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKD-----PPPVAAEEAEAGTRAFRRLVEKKVLPPALILFLAS 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 240 LGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFidIFARPAAGFVAglGKVRPYSVYLFSFSMFFNGLADLagSTAGDYG 319
Cdd:cd17489   208 IAYGAISTFLPLYAAERGISNAGLFFTVYAIAL--LLSRPFSGKLS--DRKGPKTVIIPGLLLLALGLLLL--SFAGSPW 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 320 GLVVFCIFFGISYGMV-GALQFEVLmAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHvYMYVFILAGAEVLTS 398
Cdd:cd17489   282 MLLLAAVLYGLGFGLLfPALQALAV-DLVPPHRRGAANGTFFIFFDLGIGLGGLLLGLVAELFG-YRAMFLLAAVVVLLA 359

                  ....*.
gi 1370472578 399 SLILLL 404
Cdd:cd17489   360 LVLYIF 365
MFS_1 pfam07690
Major Facilitator Superfamily;
230-404 2.07e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 43.18  E-value: 2.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 230 LYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVAGLGKVRPysvyLFSFSMFFNGLAD 309
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRR----VLLIGLLLFALGL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 310 LAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYmYVFI 389
Cdd:pfam07690  77 LLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWR-AAFL 155
                         170
                  ....*....|....*
gi 1370472578 390 LAGAEVLTSSLILLL 404
Cdd:pfam07690 156 ILAILSLLAAVLLLL 170
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
23-177 3.45e-04

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 42.57  E-value: 3.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  23 AVLFGCFVITGFSYAfpkAVSVFFKELIQEFGIGYSDTAWISSI-LLAMLYGT---GPLcsvcVNRFGCRPVMLVGGLFA 98
Cdd:cd17365     2 ALCFLIIVLDGFDLA---VMGFVAPALAQDWGLSPAQLGPVGSAaLFGMAIGAllaGPL----ADRFGRKRVLLVSVALF 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  99 SLGMVAASFCRSIIQVYLT---TGVitGLGLALnfqPSLIMLNRYFS--KRRPMANGLAAAGSPVFLCALSPLGQLLQDR 173
Cdd:cd17365    75 GLFTLLTAFAQSVLQLALLrflTGL--GLGAAM---PNAITLVSEYApaRRRSLAVTLMFCGYPLGAALGGFLAAALIPA 149

                  ....
gi 1370472578 174 YGWR 177
Cdd:cd17365   150 FGWR 153
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
49-404 4.58e-04

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 42.29  E-value: 4.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  49 LIQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVyLTTGVITGLGLAL 128
Cdd:cd06180    25 MLAELGLSYAQAGWIATANYAGYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAAMALTSGFAAL-LALRFLAGAASAF 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 129 NFQP-SLIMLNRYFSKRRPMANGL--AAAGSPVFLCALSPLGqLLQDRYGWRGGFLILGGLLLNCCVCAALMRPLVVTAQ 205
Cdd:cd06180   104 VFVFgSNLVLHHATAAGRGHLIGLlfAGVGLGIALSGLLVPA-GLGGGLSWRAGWLALALLSAVLLLLSFLLLRRGPSAP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 206 PGSGPPRPSRrlldlsvFRDRGFVLYAVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVA 285
Cdd:cd06180   183 TEASAAESAP-------GLNRPLWRLALAYGLFGFGYIITATFLPLIARETGAGSLLAGLLWSLFGLAAVPSCFLWGALS 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 286 GLGKVRPysvyLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGISY-GMVGALQFEVLMaiVGTHKFSSAIGLVLLMEA 364
Cdd:cd06180   256 DRWGTRR----ALAANLLVQAVGVLLPLLSPGPAGLVLSAVLFGGTFmAITALVMALARE--LAPPAAPRALALMTASFG 329
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1370472578 365 VAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILLL 404
Cdd:cd06180   330 VGQILGPLLAGWLADATGGFAPALILAAAALVVAALLALL 369
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
22-405 1.00e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 41.44  E-value: 1.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  22 WAVLFGCFVITGFSYAFPKAVSVFFKeliQEFGIGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLG 101
Cdd:cd17329     2 WVLLIGSFLNRLGFFMVWPFMAIYLH---QQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 102 MVAASFCRSIIQVYLTTgVITGLGLALNFQPSLIML---------NRYFSKRRPMANGLAAAGspvflcalSPLGQLLQD 172
Cdd:cd17329    79 FALLGFAHSPWLFAIAL-VLTGFGGGLFEPASEAMIadvttpenrTRAFSLLYWAINLGVAIG--------PLLGGLLLL 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 173 rYGWRGGFLILGGLLLNCCVCAALMRPLVVTAQPGSGPPRPSRRLldLSVFRDRGFVLYAVAASVMVLGLFVPPVFVVSY 252
Cdd:cd17329   150 -YSFRLLFLAAAVLFLLAALVLLFLLPETRPKRRAAEKTEILRGY--KIVLRDRAFLLFLLASFLISLIYFQLESTLPVY 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 253 AKD-LGVPDTKAAFLLTILG-FIDIFARPAAGFVAglgkvRPYSVYLFSFSMFFNGLADLAGSTAGDYGGLVVFCIFFGI 330
Cdd:cd17329   227 VVEiLGLGESLLGLLLALNAlLIVLLQFPVARLVE-----RFRLRKILMIGILLFAIGFAVLAFANTLAVLILAMIVLTL 301
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1370472578 331 SYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGaeVLTSSLILLLG 405
Cdd:cd17329   302 GEMLVFPAVQTLVAALAPPDKRGSYMGFYALAWGLGRAIGPLVGGLLLDLLGPGLPWLILAA--LGLIAAALLLG 374
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
232-404 1.08e-03

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 41.00  E-value: 1.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 232 AVAASVMVLGLFVPPVFVVSYAKDLGVPDTKAAFLLTI--LGFIdIFARPAAGFVAGLGKVRpysvyLFSFSMFFNGLAD 309
Cdd:cd17324     5 ALAAFAIGTTEYVIQGLLPDIARDFGVSVAQAGLLVSAyaLGYA-LGALLLGPLSDRIERRR-----LLLVLLLLFILGN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 310 LAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFI 389
Cdd:cd17324    79 LLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLA 158
                         170
                  ....*....|....*
gi 1370472578 390 LAGAEVLTSSLILLL 404
Cdd:cd17324   159 IAVLALLAALLLWRL 173
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
46-403 1.16e-03

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 41.02  E-value: 1.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  46 FKELIQEFGIGYSDTAWISSILLAMlYGTGPLC-SVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIiQVYLTTGVITGL 124
Cdd:cd17320    22 LPAIARDLGASASAVQLTLSAYLLG-FALGQLLyGPLSDRFGRRPVLLAGLLLFILASLLCALASSI-EQLLIARFLQGL 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 125 GLALNFQPSLIMLNRYFSKRRpMANGLAAAGSPVflcALSP-----LGQLLQDRYGWRGGFLILgglllncCVCAALMRP 199
Cdd:cd17320   100 GAAAGSVVARAIVRDLYSGAE-LAKIFSLLMMIL---AIAPalaplLGGLLLLFFGWRAIFVFL-------ALLGLLLLL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 200 LVVTAQPGSGPPRPSRRLLD------LSVFRDRGFVLYAVAASVMVLGLFvppVFVVS----YAKDLGVPDTK--AAFLL 267
Cdd:cd17320   169 LVLLFLPETLPEEKRKPLLSsllrayKRVLKNRRFLGYALALGLSFAGLF---AYLAAapfiYIEQLGLSPAQfgLLFAL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 268 TILGFIdifarpAAGFVAG--LGKVRPYSVYLFSFSMFFNGLADLAGSTAGDYGG---LVVFCIFFGISYGMVGALQFEV 342
Cdd:cd17320   246 NAIALI------LGSLLNGrlVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSlwpLVAPLFLIFFGFGLIFPNATSL 319
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1370472578 343 LMAIVGTHKfSSAIGLVLLMEAVAVLVGPPSGGKLLDATHVYMYVFILAGAEVLTSSLILL 403
Cdd:cd17320   320 ALEPFPHVA-GTASALLGFLQFLIGALAGALVGLLPNGTALPMGLLILVLGLLALLLLILL 379
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
43-177 1.92e-03

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 40.69  E-value: 1.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578  43 SVFFKELIQEFGiGYSDTAWISSILLAMLYGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQVyLTTGVIT 122
Cdd:cd06179    18 AAVLPFIVADLG-PSSNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNML-IGGQALI 95
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1370472578 123 GLGLALNFQPSLIMLNRYFSKRRPMANGLA-AAGSPVFLCALSPLGQLLQDRY-GWR 177
Cdd:cd06179    96 GIGAGTQGLGAAVASELVPNKYRGLVQGVVnLVASPGSALGPLIAGALVEANAaGWR 152
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
228-419 8.42e-03

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 38.32  E-value: 8.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 228 FVLYAVAASVMVLGLF-VPPVFVvSYAKDLGVPDTKAAFLLTILGFIDIFARPAAGFVA---GLGKVrpysvylFSFSMF 303
Cdd:cd17474     1 LYAVFFATLLAVLGVSiVDPILP-AIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLAdrfGRKKV-------LLPGLL 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1370472578 304 FNGLADLAGSTAGDYGGLVVFCIFFGISYGMVGALQFEVLMAIVGTHKFSSAIGLVLLMEAVAVLVGPPSGGKLldATHV 383
Cdd:cd17474    73 LFGIGGLLCGLSDSFALLLAGRALQGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLL--AAIS 150
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1370472578 384 YMYVFILAGAevltSSLILLLGNFFCIRKKPKEPQP 419
Cdd:cd17474   151 WRYPFFLLAA----LIPVAFLAILFLLPEPKEKAKS 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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