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Conserved domains on  [gi|1720423198|ref|XP_030098594|]
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serine/threonine-protein kinase LMTK3 isoform X4 [Mus musculus]

Protein Classification

protein kinase family protein( domain architecture ID 1904492)

protein kinase family protein may catalyze the transfer of the gamma-phosphoryl group from ATP to substrates such as serine/threonine and/or tyrosine residues on proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
1-201 2.30e-143

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd14206:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 276  Bit Score: 433.99  E-value: 2.30e-143
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14206     76 MEFCQLGDLKRYLRAQRKADGMTPDLPTRDLRTLQRMAYEITLGLLHLHKNNYIHSDLALRNCLLTSDLTVRIGDYGLSH 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd14206    156 NNYKEDYYLTPDRLWIPLRWVAPELLDELHGNLIVVDQSKESNVWSLGVTIWELFEFGAQPYRHLSDEEVLTFVVREQQM 235
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd14206    236 KLAKPRLKLPYADYWYEIMQSCWLPPSQRPSVEELHLQLSY 276
SPS1 super family cl43163
Serine/threonine protein kinase [Signal transduction mechanisms];
1-421 4.12e-20

Serine/threonine protein kinase [Signal transduction mechanisms];


The actual alignment was detected with superfamily member COG0515:

Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 95.08  E-value: 4.12e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:COG0515     86 MEYVEGESLADLLRRRGP-------LPPAEAL---RILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIAR 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPlRWAAPE-LLGElhgsfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQH 159
Cdd:COG0515    156 ALGGATLTQTGTVVGTP-GYMAPEqARGE--------PVDPRSDVYSLGVTLYELLT-GRPPFDGDSPAELLRAHLREPP 225
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  160 VKLARPRLKLPYAdyWYDILQSCWRP-PAQRP-SASDLQLQLtyllsERPPRPPPPPPPPRDGPFPWPWPPSHSAPRPGT 237
Cdd:COG0515    226 PPPSELRPDLPPA--LDAIVLRALAKdPEERYqSAAELAAAL-----RAVLRSLAAAAAAAAAAAAAAAAAAAAAAAAAA 298
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  238 LSSQFPLLDGFPGADPDDVLTVTESSRGLNLECLWEKARRGAGRGGGAPPWQPASAPPAPHTNPSNPFYEALSTPSVLPV 317
Cdd:COG0515    299 AAAAAAAAAAAAAAAAAAAAAAAAPAAAAAAAAAAAALAAAAAAAAAAAAAALLAAAAALAAAAAAAAAAAAAAAAAAAA 378
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  318 ISARSPSVSSEYYIRLEEHGSPPEPLFPNDWDPLDPGVPGPQAPQTPSEVPQLVSETWASPLFPAPRPFPAQSSGSGGFL 397
Cdd:COG0515    379 AAAAAALAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAARLLAAAAAAAAAAAAA 458
                          410       420
                   ....*....|....*....|....
gi 1720423198  398 LSGWDPEGRGAGETLAGDPAEVLG 421
Cdd:COG0515    459 PLLAALLAAAALAAAAAAAALALA 482
 
Name Accession Description Interval E-value
PTKc_Aatyk3 cd14206
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs ...
1-201 2.30e-143

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk3, also called lemur tyrosine kinase 3 (Lmtk3) is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. The function of Aatyk3 is still unknown. The Aatyk3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271108 [Multi-domain]  Cd Length: 276  Bit Score: 433.99  E-value: 2.30e-143
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14206     76 MEFCQLGDLKRYLRAQRKADGMTPDLPTRDLRTLQRMAYEITLGLLHLHKNNYIHSDLALRNCLLTSDLTVRIGDYGLSH 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd14206    156 NNYKEDYYLTPDRLWIPLRWVAPELLDELHGNLIVVDQSKESNVWSLGVTIWELFEFGAQPYRHLSDEEVLTFVVREQQM 235
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd14206    236 KLAKPRLKLPYADYWYEIMQSCWLPPSQRPSVEELHLQLSY 276
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
1-199 5.72e-54

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 189.30  E-value: 5.72e-54
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198     1 MEFCQLGDLKRYLRAQRPPEgmspeLPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:smart00221   80 MEYMPGGDLLDYLRKNRPKE-----LSLSDL---LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSR 151
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    81 SNYKEDYYlTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:smart00221  152 DLYDDDYY-KVKGGKLPIRWMAPESL--KEGKF-----TSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGY-- 221
                           170       180       190       200
                    ....*....|....*....|....*....|....*....|.
gi 1720423198   161 KLARPrlklPYA-DYWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:smart00221  222 RLPKP----PNCpPELYKLMLQCWAEdPEDRPTFSELVEIL 258
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
1-199 5.76e-54

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 189.24  E-value: 5.76e-54
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspeLPPRDLrtLQrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:pfam07714   80 TEYMPGGDLLDFLRKHKRK------LTLKDL--LS-MALQIAKGMEYLESKNFVHRDLAARNCLVSENLVVKISDFGLSR 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:pfam07714  151 DIYDDDYYRKRGGGKLPIKWMAPESL--KDGKF-----TSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEFLEDGY-- 221
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPrlklPYA-DYWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:pfam07714  222 RLPQP----ENCpDELYDLMKQCWAYdPEDRPTFSELVEDL 258
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
1-421 4.12e-20

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 95.08  E-value: 4.12e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:COG0515     86 MEYVEGESLADLLRRRGP-------LPPAEAL---RILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIAR 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPlRWAAPE-LLGElhgsfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQH 159
Cdd:COG0515    156 ALGGATLTQTGTVVGTP-GYMAPEqARGE--------PVDPRSDVYSLGVTLYELLT-GRPPFDGDSPAELLRAHLREPP 225
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  160 VKLARPRLKLPYAdyWYDILQSCWRP-PAQRP-SASDLQLQLtyllsERPPRPPPPPPPPRDGPFPWPWPPSHSAPRPGT 237
Cdd:COG0515    226 PPPSELRPDLPPA--LDAIVLRALAKdPEERYqSAAELAAAL-----RAVLRSLAAAAAAAAAAAAAAAAAAAAAAAAAA 298
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  238 LSSQFPLLDGFPGADPDDVLTVTESSRGLNLECLWEKARRGAGRGGGAPPWQPASAPPAPHTNPSNPFYEALSTPSVLPV 317
Cdd:COG0515    299 AAAAAAAAAAAAAAAAAAAAAAAAPAAAAAAAAAAAALAAAAAAAAAAAAAALLAAAAALAAAAAAAAAAAAAAAAAAAA 378
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  318 ISARSPSVSSEYYIRLEEHGSPPEPLFPNDWDPLDPGVPGPQAPQTPSEVPQLVSETWASPLFPAPRPFPAQSSGSGGFL 397
Cdd:COG0515    379 AAAAAALAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAARLLAAAAAAAAAAAAA 458
                          410       420
                   ....*....|....*....|....
gi 1720423198  398 LSGWDPEGRGAGETLAGDPAEVLG 421
Cdd:COG0515    459 PLLAALLAAAALAAAAAAAALALA 482
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
1-155 2.03e-06

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 51.94  E-value: 2.03e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaQRPPEgmspELPPRDlrtlQRMGL---EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:PTZ00267   144 MEYGSGGDLNKQIK-QRLKE----HLPFQE----YEVGLlfyQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFG 214
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ------------LAHSNYKEDYYLTPErLWVPLRWaapellgelhgsfvlvdqSRESNVWSLGVTLWELFEFgAQPYRHL 145
Cdd:PTZ00267   215 fskqysdsvsldVASSFCGTPYYLAPE-LWERKRY------------------SKKADMWSLGVILYELLTL-HRPFKGP 274
                          170
                   ....*....|
gi 1720423198  146 SDEEVLAFVV 155
Cdd:PTZ00267   275 SQREIMQQVL 284
YegI COG4248
Uncharacterized conserved protein YegI with protein kinase and helix-hairpin-helix DNA-binding ...
25-143 7.25e-06

Uncharacterized conserved protein YegI with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only];


Pssm-ID: 443390 [Multi-domain]  Cd Length: 476  Bit Score: 50.09  E-value: 7.25e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   25 ELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDY-GLAHSNYKEDYYL---TPERLwvplrw 100
Cdd:COG4248    114 QFPLFDWLFLLRTARNLAAAVAALHAAGYVHGDVNPSNILVSDTALVTLIDTdSFQVRDPGKVYRCvvgTPEFT------ 187
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  101 aAPELLGelhGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYR 143
Cdd:COG4248    188 -PPELQG---KSFARVDRTEEHDRFGLAVLIFQLLMEGRHPFS 226
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
1-79 2.44e-05

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 48.64  E-value: 2.44e-05
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRdlRTLQRMGlEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:NF033483    86 MEYVDGRTLKDYIREHGP-------LSPE--EAVEIMI-QILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFGIA 154
arch_bud32 TIGR03724
Kae1-associated kinase Bud32; Members of this protein family are the Bud32 protein associated ...
40-87 1.07e-03

Kae1-associated kinase Bud32; Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. [Unknown function, General]


Pssm-ID: 274749 [Multi-domain]  Cd Length: 199  Bit Score: 41.81  E-value: 1.07e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIgDYGLA-HSNYKEDY 87
Cdd:TIGR03724   98 EIGRLVGKLHKAGIVHGDLTTSNIIVRDDKVYLI-DFGLGkYSDEIEDK 145
 
Name Accession Description Interval E-value
PTKc_Aatyk3 cd14206
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs ...
1-201 2.30e-143

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk3, also called lemur tyrosine kinase 3 (Lmtk3) is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. The function of Aatyk3 is still unknown. The Aatyk3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271108 [Multi-domain]  Cd Length: 276  Bit Score: 433.99  E-value: 2.30e-143
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14206     76 MEFCQLGDLKRYLRAQRKADGMTPDLPTRDLRTLQRMAYEITLGLLHLHKNNYIHSDLALRNCLLTSDLTVRIGDYGLSH 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd14206    156 NNYKEDYYLTPDRLWIPLRWVAPELLDELHGNLIVVDQSKESNVWSLGVTIWELFEFGAQPYRHLSDEEVLTFVVREQQM 235
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd14206    236 KLAKPRLKLPYADYWYEIMQSCWLPPSQRPSVEELHLQLSY 276
PTKc_Aatyk cd05042
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases; PTKs ...
1-201 1.50e-127

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. Aatyk proteins are mostly receptor PTKs (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as PTKs based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. The Aatyk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270638 [Multi-domain]  Cd Length: 269  Bit Score: 392.34  E-value: 1.50e-127
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEgmspeLPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05042     74 MEFCDLGDLKAYLRSEREHE-----RGDSDTRTLQRMACEVAAGLAHLHKLNFVHSDLALRNCLLTSDLTVKIGDYGLAH 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd05042    149 SRYKEDYIETDDKLWFPLRWTAPELVTEFHDRLLVVDQTKYSNIWSLGVTLWELFENGAQPYSNLSDLDVLAQVVREQDT 228
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd05042    229 KLPKPQLELPYSDRWYEVLQFCWLSPEQRPAAEDVHLLLTY 269
PTKc_Aatyk1 cd05087
Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1; PTKs ...
1-201 5.02e-97

Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 (or simply Aatyk) is also called lemur tyrosine kinase 1 (Lmtk1). It is a cytoplasmic (or nonreceptor) kinase containing a long C-terminal region. The expression of Aatyk1 is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The Aatyk1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270670 [Multi-domain]  Cd Length: 271  Bit Score: 310.38  E-value: 5.02e-97
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05087     76 MEFCPLGDLKGYLRSCRAAESMAP-----DPLTLQRMACEVACGLLHLHRNNFVHSDLALRNCLLTADLTVKIGDYGLSH 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd05087    151 CKYKEDYFVTADQLWVPLRWIAPELVDEVHGNLLVVDQTKQSNVWSLGVTIWELFELGNQPYRHYSDRQVLTYTVREQQL 230
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd05087    231 KLPKPQLKLSLAERWYEVMQFCWLQPEQRPTAEEVHLLLSY 271
PTKc_Aatyk2 cd05086
Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2; PTKs ...
2-201 1.29e-82

Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a PTK based on sequence similarity and the phylogenetic tree, Aatyk2 has been functionally characterized as a serine/threonine kinase. The Aatyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270669 [Multi-domain]  Cd Length: 271  Bit Score: 270.97  E-value: 1.29e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRppegmspELPPRDLRT--LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd05086     77 EFCDLGDLKTYLANQQ-------EKLRGDSQImlLQRMACEIAAGLAHMHKHNFLHSDLALRNCYLTSDLTVKVGDYGIG 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQH 159
Cdd:cd05086    150 FSRYKEDYIETDDKKYAPLRWTAPELVTSFQDGLLAAEQTKYSNIWSLGVTLWELFENAAQPYSDLSDREVLNHVIKERQ 229
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  160 VKLARPRLKLPYADYWYDILQSCWRPPAQRPSASDLQLQLTY 201
Cdd:cd05086    230 VKLFKPHLEQPYSDRWYEVLQFCWLSPEKRPTAEEVHRLLTY 271
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
1-200 3.09e-60

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 207.39  E-value: 3.09e-60
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP--PEGMSPELPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd00192     75 MEYMEGGDLLDFLRKSRPvfPSPEPSTLSLKDL---LSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGL 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQ 158
Cdd:cd00192    152 SRDIYDDDYYRKKTGGKLPIRWMAPESL--KDGIF-----TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY 224
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  159 hvKLARPrlklPYA-DYWYDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd00192    225 --RLPKP----ENCpDELYELMLSCWQLdPEDRPTFSELVERLE 262
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
1-199 5.72e-54

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 189.30  E-value: 5.72e-54
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198     1 MEFCQLGDLKRYLRAQRPPEgmspeLPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:smart00221   80 MEYMPGGDLLDYLRKNRPKE-----LSLSDL---LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSR 151
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    81 SNYKEDYYlTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:smart00221  152 DLYDDDYY-KVKGGKLPIRWMAPESL--KEGKF-----TSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGY-- 221
                           170       180       190       200
                    ....*....|....*....|....*....|....*....|.
gi 1720423198   161 KLARPrlklPYA-DYWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:smart00221  222 RLPKP----PNCpPELYKLMLQCWAEdPEDRPTFSELVEIL 258
PK_Tyr_Ser-Thr pfam07714
Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role ...
1-199 5.76e-54

Protein tyrosine and serine/threonine kinase; Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyze the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyze the reverse process. Protein kinases fall into three broad classes, characterized with respect to substrate specificity; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.


Pssm-ID: 462242 [Multi-domain]  Cd Length: 258  Bit Score: 189.24  E-value: 5.76e-54
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspeLPPRDLrtLQrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:pfam07714   80 TEYMPGGDLLDFLRKHKRK------LTLKDL--LS-MALQIAKGMEYLESKNFVHRDLAARNCLVSENLVVKISDFGLSR 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:pfam07714  151 DIYDDDYYRKRGGGKLPIKWMAPESL--KDGKF-----TSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEFLEDGY-- 221
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPrlklPYA-DYWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:pfam07714  222 RLPQP----ENCpDELYDLMKQCWAYdPEDRPTFSELVEDL 258
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
1-199 2.23e-53

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 187.35  E-value: 2.23e-53
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198     1 MEFCQLGDLKRYLRAQRPpegmspELPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:smart00219   80 MEYMEGGDLLSYLRKNRP------KLSLSDL---LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSR 150
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    81 SNYKEDYYlTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVV---RQ 157
Cdd:smart00219  151 DLYDDDYY-RKRGGKLPIRWMAPESL--KEGKF-----TSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKngyRL 222
                           170       180       190       200
                    ....*....|....*....|....*....|....*....|...
gi 1720423198   158 QHVKLARPRLklpyadywYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:smart00219  223 PQPPNCPPEL--------YDLMLQCWAEdPEDRPTFSELVEIL 257
PTKc_InsR_like cd05032
Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer ...
1-195 1.19e-51

Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. InsR and IGF-1R are receptor PTKs (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. The InsR-like subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173625 [Multi-domain]  Cd Length: 277  Bit Score: 183.31  E-value: 1.19e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05032     88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTR 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHv 160
Cdd:cd05032    168 DIYETDYYRKGGKGLLPVRWMAPESLKD--GVF-----TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH- 239
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1720423198  161 klarprLKLPYA--DYWYDILQSCWR-PPAQRPSASDL 195
Cdd:cd05032    240 ------LDLPENcpDKLLELMRMCWQyNPKMRPTFLEI 271
PTK_CCK4 cd05046
Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also ...
1-195 2.37e-43

Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4; CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor PTK (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. The CCK4 subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133178 [Multi-domain]  Cd Length: 275  Bit Score: 159.17  E-value: 2.37e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEgmsPELPPRDLRTLQRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd05046     87 LEYTDLGDLKQFLRATKSKD---EKLKPPPLSTKQKVALctQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTpERLWVPLRWAAPELLGElhgsfvlVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAfvvrqq 158
Cdd:cd05046    164 SKDVYNSEYYKL-RNALIPLRWLAPEAVQE-------DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLN------ 229
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  159 hvKLARPRLKLPYAD----YWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd05046    230 --RLQAGKLELPVPEgcpsRLYKLMTRCWAVnPKDRPSFSEL 269
PTKc_c-ros cd05044
Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the ...
1-199 4.34e-41

Catalytic domain of the Protein Tyrosine Kinase, C-ros; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily contains c-ros, Sevenless, and similar proteins. The proto-oncogene c-ros encodes an orphan receptor PTK (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. The c-ros subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270640 [Multi-domain]  Cd Length: 268  Bit Score: 152.57  E-value: 4.34e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTS----DLTVRIGDY 76
Cdd:cd05044     78 LELMEGGDLLSYLRAARPTAFTPPLL---TLKDLLSICVDVAKGCVYLEDMHFVHRDLAARNCLVSSkdyrERVVKIGDF 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   77 GLAHSNYKEDYYLTP-ERLwVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVv 155
Cdd:cd05044    155 GLARDIYKNDYYRKEgEGL-LPVRWMAPESL--VDGVF-----TTQSDVWAFGVLMWEILTLGQQPYPARNNLEVLHFV- 225
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  156 rQQHVKLARPRlKLPyaDYWYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05044    226 -RAGGRLDQPD-NCP--DDLYELMLRCWStDPEERPSFARILEQL 266
PTKc_TrkA cd05092
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze ...
2-199 2.99e-39

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. The TrkA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270674 [Multi-domain]  Cd Length: 280  Bit Score: 147.81  E-value: 2.99e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRP-----PEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDY 76
Cdd:cd05092     87 EYMRHGDLNRFLRSHGPdakilDGGEGQAPGQLTLGQMLQIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDF 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   77 GLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVr 156
Cdd:cd05092    167 GMSRDIYSTDYYRVGGRTMLPIRWMPPESI--LYRKF-----TTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT- 238
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  157 qQHVKLARPRLKLPYAdywYDILQSCW-RPPAQRPSASDLQLQL 199
Cdd:cd05092    239 -QGRELERPRTCPPEV---YAIMQGCWqREPQQRHSIKDIHSRL 278
PTKc_DDR cd05051
Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors; PTKs catalyze ...
1-200 4.94e-39

Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270644 [Multi-domain]  Cd Length: 297  Bit Score: 147.48  E-value: 4.94e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaQRPPEGMSPEL---PPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:cd05051     98 VEYMENGDLNQFLQ-KHEAETQGASAtnsKTLSYGTLLYMATQIASGMKYLESLNFVHRDLATRNCLVGPNYTIKIADFG 176
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFG-AQPYRHLSDEEVLA---- 152
Cdd:cd05051    177 MSRNLYSGDYYRIEGRAVLPIRWMAWE-------SILLGKFTTKSDVWAFGVTLWEILTLCkEQPYEHLTDEQVIEnage 249
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198  153 -FVVRQQHVKLARPRLkLPyADYwYDILQSCW-RPPAQRPSASDLQLQLT 200
Cdd:cd05051    250 fFRDDGMEVYLSRPPN-CP-KEI-YELMLECWrRDEEDRPTFREIHLFLQ 296
PTKc_InsR cd05061
Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor; PTKs catalyze the transfer ...
1-191 5.94e-39

Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor PTK (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. The InsR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133192 [Multi-domain]  Cd Length: 288  Bit Score: 147.04  E-value: 5.94e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05061     88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHv 160
Cdd:cd05061    168 DIYETDYYRKGGKGLLPVRWMAPESLKD--GVF-----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY- 239
                          170       180       190
                   ....*....|....*....|....*....|..
gi 1720423198  161 kLARPRlKLPyaDYWYDILQSCWR-PPAQRPS 191
Cdd:cd05061    240 -LDQPD-NCP--ERVTDLMRMCWQfNPKMRPT 267
PTKc_Musk cd05050
Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the ...
2-195 2.16e-38

Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor PTK (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. The Musk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133181 [Multi-domain]  Cd Length: 288  Bit Score: 145.36  E-value: 2.16e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRP----------PEGMSPELPPRDLRTLQR--MGLEIARGLAHLHSHNYVHSDLALRNCLLTSDL 69
Cdd:cd05050     88 EYMAYGDLNEFLRHRSPraqcslshstSSARKCGLNPLPLSCTEQlcIAKQVAAGMAYLSERKFVHRDLATRNCLVGENM 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 TVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEE 149
Cdd:cd05050    168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESI--FYNRY-----TTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198  150 VLAFvVRQQHVkLARPR---LKLpyadywYDILQSCW-RPPAQRPSASDL 195
Cdd:cd05050    241 VIYY-VRDGNV-LSCPDncpLEL------YNLMRLCWsKLPSDRPSFASI 282
PTKc_Trk cd05049
Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze ...
2-199 4.49e-38

Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. The Trk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270643 [Multi-domain]  Cd Length: 280  Bit Score: 144.15  E-value: 4.49e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGM--SPELPPRDLRTLQRM--GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:cd05049     88 EYMEHGDLNKFLRSHGPDAAFlaSEDSAPGELTLSQLLhiAVQIASGMVYLASQHFVHRDLATRNCLVGTNLVVKIGDFG 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQ 157
Cdd:cd05049    168 MSRDIYSTDYYRVGGHTMLPIRWMPPESI--LYRKF-----TTESDVWSFGVVLWEIFTYGKQPWFQLSNTEVIECI--T 238
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  158 QHVKLARPRLKLPYAdywYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd05049    239 QGRLLQRPRTCPSEV---YAVMLGCWKRePQQRLNIKDIHKRL 278
PTKc_Ror cd05048
Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan ...
2-199 4.05e-37

Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Ror subfamily consists of Ror1, Ror2, and similar proteins. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. The Ror subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270642 [Multi-domain]  Cd Length: 283  Bit Score: 141.74  E-value: 4.05e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMG------LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd05048     88 EYMAHGDLHEFLVRHSPHSDVGVSSDDDGTASSLDQSdflhiaIQIAAGMEYLSSHHYVHRDLAARNCLVGDGLTVKISD 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLaFVV 155
Cdd:cd05048    168 FGLSRDIYSSDYYRVQSKSLLPVRWMPPEAI--LYGKF-----TTESDVWSFGVVLWEIFSYGLQPYYGYSNQEVI-EMI 239
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  156 RQQHVklarprlkLPYAD----YWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd05048    240 RSRQL--------LPCPEdcpaRVYSLMVECWHEiPSRRPRFKEIHTRL 280
PTKc_Jak_rpt2 cd05038
Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily ...
1-203 1.56e-34

Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are PTKs, catalyzing the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jaks are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270634 [Multi-domain]  Cd Length: 284  Bit Score: 134.05  E-value: 1.56e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEgmspelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05038     87 MEYLPSGSLRDYLQRHRDQI---------DLKRLLLFASQICKGMEYLGSQRYIHRDLAARNILVESEDLVKISDFGLAK 157
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFG-------AQPYRHLSDEEVLA 152
Cdd:cd05038    158 VlPEDKEYYYVKEPGESPIFWYAPECLRE--SRF-----SSASDVWSFGVTLYELFTYGdpsqsppALFLRMIGIAQGQM 230
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  153 FVVRQQHVKLARPRLKLPYA--DYWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd05038    231 IVTRLLELLKSGERLPRPPScpDEVYDLMKECWEYePQDRPSFSDLILIIDRLR 284
PTKc_IGF-1R cd05062
Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor; PTKs ...
1-191 2.17e-34

Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor PTK (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. The IGF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133193 [Multi-domain]  Cd Length: 277  Bit Score: 133.62  E-value: 2.17e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05062     88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVrqQHV 160
Cdd:cd05062    168 DIYETDYYRKGGKGLLPVRWMSPESLKD--GVF-----TTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM--EGG 238
                          170       180       190
                   ....*....|....*....|....*....|..
gi 1720423198  161 KLARPRlKLPyaDYWYDILQSCWR-PPAQRPS 191
Cdd:cd05062    239 LLDKPD-NCP--DMLFELMRMCWQyNPKMRPS 267
PTKc_DDR2 cd05095
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze ...
2-199 2.20e-34

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR2 results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens as well as collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. The DDR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270677 [Multi-domain]  Cd Length: 297  Bit Score: 133.96  E-value: 2.20e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGM--SPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd05095     99 EYMENGDLNQFLSRQQPEGQLalPSNALTVSYSDLRFMAAQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMS 178
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEF-GAQPYRHLSDEEVLA-----F 153
Cdd:cd05095    179 RNLYSGDYYRIQGRAVLPIRWMSWESI--LLGKF-----TTASDVWAFGVTLWETLTFcREQPYSQLSDEQVIEntgefF 251
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1720423198  154 VVRQQHVKLARPRLklpYADYWYDILQSCWRPPAQ-RPSASDLQLQL 199
Cdd:cd05095    252 RDQGRQTYLPQPAL---CPDSVYKLMLSCWRRDTKdRPSFQEIHTLL 295
PTKc_Tec_like cd05059
Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
1-200 4.83e-33

Catalytic domain of Tec-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Tec-like subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nonreceptor PTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. Tec kinases play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). The Tec-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173637 [Multi-domain]  Cd Length: 256  Bit Score: 128.72  E-value: 4.83e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSpelpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05059     78 TEYMANGCLLNYLRERRGKFQTE---------QLLEMCKDVCEAMEYLESNGFIHRDLAARNCLVGEQNVVKVSDFGLAR 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SnYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHV 160
Cdd:cd05059    149 Y-VLDDEYTSSVGTKFPVKWSPPEVF--MYSKF-----SSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVEHI--SQGY 218
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLKLPYAdywYDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd05059    219 RLYRPHLAPTEV---YTIMYSCWHEkPEERPTFKILLSQLT 256
PTK_Ryk cd05043
Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase ...
7-200 7.24e-33

Pseudokinase domain of Ryk (Receptor related to tyrosine kinase); Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain, which shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. The Ryk subfamily is part of a larger superfamily that includes other pseudokinases and the catalytic domains of active kinases including PTKs, protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270639 [Multi-domain]  Cd Length: 279  Bit Score: 129.11  E-value: 7.24e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    7 GDLKRYLRAQRppegMSPELPPRDLRTLQ--RMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYK 84
Cdd:cd05043     93 GNLKLFLQQCR----LSEANNPQALSTQQlvHMALQIACGMSYLHRRGVIHKDIAARNCVIDDELQVKITDNALSRDLFP 168
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   85 EDYYLTPERLWVPLRWAAPELLGELHGSFvlvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVKLAR 164
Cdd:cd05043    169 MDYHCLGDNENRPIKWMSLESLVNKEYSS-------ASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL--KDGYRLAQ 239
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1720423198  165 PrLKLPyaDYWYDILQSCWR-PPAQRPSASDLQLQLT 200
Cdd:cd05043    240 P-INCP--DELFAVMACCWAlDPEERPSFQQLVQCLT 273
PTKc_Syk_like cd05060
Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
1-199 1.31e-32

Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Syk-like subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. The Syk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270650 [Multi-domain]  Cd Length: 257  Bit Score: 127.85  E-value: 1.31e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05060     74 MELAPLGPLLKYLKKRR-------EIPVSDLKELA---HQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSR 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKEDYY-LTPERLWvPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQ 158
Cdd:cd05060    144 AlGAGSDYYrATTAGRW-PLKWYAPECIN--YGKF-----SSKSDVWSYGVTLWEAFSYGAKPYGEMKGPEVIAML--ES 213
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  159 HVKLARPRlKLPyaDYWYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05060    214 GERLPRPE-ECP--QEIYSIMLSCWKyRPEDRPTFSELESTF 252
PTKc_FGFR cd05053
Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs ...
2-195 2.56e-32

Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. The FGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 270646 [Multi-domain]  Cd Length: 294  Bit Score: 127.92  E-value: 2.56e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPE---GMSPELPPRD---LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd05053     97 EYASKGNLREFLRARRPPGeeaSPDDPRVPEEqltQKDLVSFAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 176
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAHSNYKEDYY--LTPERLwvPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVL 151
Cdd:cd05053    177 FGLARDIHHIDYYrkTTNGRL--PVKWMAPE---------ALFDRvyTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 245
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  152 AFvVRQQHvKLARPRLklpYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd05053    246 KL-LKEGH-RMEKPQN---CTQELYMLMRDCWHEvPSQRPTFKQL 285
PTKc_ALK_LTK cd05036
Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte ...
7-201 4.30e-32

Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor PTKs (RTKs) whose ligands are not yet well-defined. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The ALK/LTK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270632 [Multi-domain]  Cd Length: 277  Bit Score: 126.73  E-value: 4.30e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    7 GDLKRYLRAQRPPEGMSPELPPRDLrtLQrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLT---VRIGDYGLAHSNY 83
Cdd:cd05036     94 GDLKSFLRENRPRPEQPSSLTMLDL--LQ-LAQDVAKGCRYLEENHFIHRDIAARNCLLTCKGPgrvAKIGDFGMARDIY 170
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   84 KEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvKLA 163
Cdd:cd05036    171 RADYYRKGGKAMLPVKWMPPEAF--LDGIF-----TSKTDVWSFGVLLWEIFSLGYMPYPGKSNQEVMEFVTSGG--RMD 241
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  164 RPRlKLPyaDYWYDILQSCWRP-PAQRPSASDLQLQLTY 201
Cdd:cd05036    242 PPK-NCP--GPVYRIMTQCWQHiPEDRPNFSTILERLNY 277
PTKc_Mer cd14204
Catalytic Domain of the Protein Tyrosine Kinase, Mer; PTKs catalyze the transfer of the ...
1-203 1.15e-31

Catalytic Domain of the Protein Tyrosine Kinase, Mer; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Mer (or Mertk) is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Mer is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Mer subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271106 [Multi-domain]  Cd Length: 284  Bit Score: 125.82  E-value: 1.15e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppEGMSPELPPrdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14204     93 LPFMKYGDLHSFLLRSR--LGSGPQHVP--LQTLLKFMIDIALGMEYLSSRNFLHRDLAARNCMLRDDMTVCVADFGLSK 168
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQ 158
Cdd:cd14204    169 KIYSGDYYRQGRIAKMPVKWIAVE---------SLADRvyTVKSDVWAFGVTMWEIATRGMTPYPGVQNHEIYDYLLHGH 239
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198  159 hvklarpRLKLPYA--DYWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd14204    240 -------RLKQPEDclDELYDIMYSCWRSdPTDRPTFTQLRENLEKLL 280
PTKc_TrkC cd05094
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze ...
2-196 1.58e-31

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. The TrkC subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270676 [Multi-domain]  Cd Length: 287  Bit Score: 125.51  E-value: 1.58e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPELPPRD------LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd05094     87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQakgelgLSQMLHIATQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGD 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVV 155
Cdd:cd05094    167 FGMSRDVYSTDYYRVGGHTMLPIRWMPPE-------SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 239
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  156 rqQHVKLARPRLklpYADYWYDILQSCW-RPPAQRPSASDLQ 196
Cdd:cd05094    240 --QGRVLERPRV---CPKEVYDIMLGCWqREPQQRLNIKEIY 276
PTKc_Ack_like cd05040
Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs ...
2-200 3.77e-31

Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. The Ack-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270636 [Multi-domain]  Cd Length: 258  Bit Score: 123.61  E-value: 3.77e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPpegmspELPprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05040     77 ELAPLGSLLDRLRKDQG------HFL---ISTLCDYAVQIANGMAYLESKRFIHRDLAARNILLASKDKVKIGDFGLMRA 147
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 -NYKEDYYLTPERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLafvvrqQHV 160
Cdd:cd05040    148 lPQNEDHYVMQEHRKVPFAWCAPESLK--TRKF-----SHASDVWMFGVTLWEMFTYGEEPWLGLNGSQIL------EKI 214
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  161 KLARPRLKLPYA---DYwYDILQSCWR-PPAQRPSASDLQLQLT 200
Cdd:cd05040    215 DKEGERLERPDDcpqDI-YNVMLQCWAhKPADRPTFVALRDFLP 257
PTKc_TrkB cd05093
Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B; PTKs catalyze ...
2-202 4.56e-31

Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a receptor PTK (RTK) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. The TrkB subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270675 [Multi-domain]  Cd Length: 288  Bit Score: 124.38  E-value: 4.56e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPE-LPPRDLRTLQRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd05093     87 EYMKHGDLNKFLRAHGPDAVLMAEgNRPAELTQSQMLHIaqQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGM 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVrqQ 158
Cdd:cd05093    167 SRDVYSTDYYRVGGHTMLPIRWMPPE-------SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT--Q 237
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  159 HVKLARPRlklPYADYWYDILQSCW-RPPAQRPSASDLQLQLTYL 202
Cdd:cd05093    238 GRVLQRPR---TCPKEVYDLMLGCWqREPHMRLNIKEIHSLLQNL 279
PTKc_Ror1 cd05090
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
2-199 5.94e-31

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270672 [Multi-domain]  Cd Length: 283  Bit Score: 123.58  E-value: 5.94e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPE--GMSPELPPRDLRTLQR-----MGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIG 74
Cdd:cd05090     87 EFMNQGDLHEFLIMRSPHSdvGCSSDEDGTVKSSLDHgdflhIAIQIAAGMEYLSSHFFVHKDLAARNILVGEQLHVKIS 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   75 DYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFV 154
Cdd:cd05090    167 DLGLSREIYSSDYYRVQNKSLLPIRWMPPEAI--MYGKF-----SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  155 VRQQHVKLAR---PRLklpyadywYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd05090    240 RKRQLLPCSEdcpPRM--------YSLMTECWQEiPSRRPRFKDIHARL 280
PTKc_Fes_like cd05041
Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; ...
1-200 6.64e-31

Catalytic domain of Fes-like Protein Tyrosine Kinases; Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions.


Pssm-ID: 270637 [Multi-domain]  Cd Length: 251  Bit Score: 122.55  E-value: 6.64e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppegmSPELPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05041     72 MELVPGGSLLTFLRKK------GARLTVK---QLLQMCLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR 142
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHV 160
Cdd:cd05041    143 EEEDGEYTVSDGLKQIPIKWTAPEAL--NYGRY-----TSESDVWSFGILLWEIFSLGATPYPGMSNQQTREQI--ESGY 213
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  161 KLARPRLkLPyaDYWYDILQSCWR-PPAQRPSASDLQLQLT 200
Cdd:cd05041    214 RMPAPEL-CP--EAVYRLMLQCWAyDPENRPSFSEIYNELQ 251
PTKc_Tyro3 cd05074
Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the ...
1-203 7.07e-31

Catalytic domain of the Protein Tyrosine Kinase, Tyro3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Tyro3 is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Tyro3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270659 [Multi-domain]  Cd Length: 284  Bit Score: 123.49  E-value: 7.07e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpeGMSPELPPrdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05074     96 LPFMKHGDLHTFLLMSRI--GEEPFTLP--LQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK 171
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGE-LHgsfvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQh 159
Cdd:cd05074    172 KIYSGDYYRQGCASKLPVKWLALESLADnVY--------TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN- 242
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1720423198  160 vklarpRLKLPY--ADYWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd05074    243 ------RLKQPPdcLEDVYELMCQCWSPePKCRPSFQHLRDQLELIW 283
PTKc_DDR1 cd05096
Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1; PTKs catalyze ...
2-200 1.22e-30

Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a receptor PTK (RTK) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDR1 results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. The DDR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133227 [Multi-domain]  Cd Length: 304  Bit Score: 123.51  E-value: 1.22e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQR---------PPEGMSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVR 72
Cdd:cd05096     99 EYMENGDLNQFLSSHHlddkeengnDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIK 178
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   73 IGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEF-GAQPYRHLSDEEVL 151
Cdd:cd05096    179 IADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI--LMGKF-----TTASDVWAFGVTLWEILMLcKEQPYGELTDEQVI 251
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  152 A-----FVVRQQHVKLARPRlklPYADYWYDILQSCW-RPPAQRPSASDLQLQLT 200
Cdd:cd05096    252 EnagefFRDQGRQVYLFRPP---PCPQGLYELMLQCWsRDCRERPSFSDIHAFLT 303
PTKc_TAM cd05035
Catalytic Domain of TAM (Tyro3, Axl, Mer) Protein Tyrosine Kinases; PTKs catalyze the transfer ...
3-203 1.62e-29

Catalytic Domain of TAM (Tyro3, Axl, Mer) Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The TAM subfamily consists of Tyro3 (or Sky), Axl, Mer (or Mertk), and similar proteins. TAM subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. TAM proteins are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. The TAM subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270631 [Multi-domain]  Cd Length: 273  Bit Score: 119.18  E-value: 1.62e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    3 FCQLGDLKRYLRAQRPpEGMSPELPprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSN 82
Cdd:cd05035     88 FMKHGDLHSYLLYSRL-GGLPEKLP---LQTLLKFMVDIAKGMEYLSNRNFIHRDLAARNCMLDENMTVCVADFGLSRKI 163
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   83 YKEDYYLTPERLWVPLRWAAPELLGE-LHGSfvlvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFvVRQQHvk 161
Cdd:cd05035    164 YSGDYYRQGRISKMPVKWIALESLADnVYTS--------KSDVWSFGVTMWEIATRGQTPYPGVENHEIYDY-LRNGN-- 232
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  162 larpRLKLPY--ADYWYDILQSCWR-PPAQRPSASDLQLQLTYLL 203
Cdd:cd05035    233 ----RLKQPEdcLDEVYFLMYFCWTvDPKDRPTFTKLREVLENIL 273
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
1-195 1.87e-29

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 118.40  E-value: 1.87e-29
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198     1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:smart00220   76 MEYCEGGDLFDLLKKRGR-------LSEDEAR---FYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLAr 145
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    80 --HSNYKEDYYL-TPErlwvplrWAAPE-LLGELHGSfvLVDqsresnVWSLGVTLWELFeFGAQPYRHLSDEEVLAFVV 155
Cdd:smart00220  146 qlDPGEKLTTFVgTPE-------YMAPEvLLGKGYGK--AVD------IWSLGVILYELL-TGKPPFPGDDQLLELFKKI 209
                           170       180       190       200
                    ....*....|....*....|....*....|....*....|.
gi 1720423198   156 RQQHVKLARPRLKLPyaDYWYDILQSCWRP-PAQRPSASDL 195
Cdd:smart00220  210 GKPKPPFPPPEWDIS--PEAKDLIRKLLVKdPEKRLTAEEA 248
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
1-191 3.45e-29

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 117.25  E-value: 3.45e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspelppRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAh 80
Cdd:cd13999     69 TEYMPGGSLYDLLHKKKIP---------LSWSLRLKIALDIARGMNYLHSPPIIHRDLKSLNILLDENFTVKIADFGLS- 138
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snyKEDYYLTPERLWVP--LRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAFVVRQQ 158
Cdd:cd13999    139 ---RIKNSTTEKMTGVVgtPRWMAPEVLR--GEPY-----TEKADVYSFGIVLWELL-TGEVPFKELSPIQIAAAVVQKG 207
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  159 hvklarPRLKLPYA--DYWYDILQSCWRP-PAQRPS 191
Cdd:cd13999    208 ------LRPPIPPDcpPELSKLIKRCWNEdPEKRPS 237
PTKc_Srm_Brk cd05148
Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal ...
2-199 6.28e-29

Catalytic domain of the Protein Tyrosine Kinases, Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and Breast tumor kinase (Brk); PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk (also called protein tyrosine kinase 6) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Brk has been found to be overexpressed in a majority of breast tumors. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The Srm/Brk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133248 [Multi-domain]  Cd Length: 261  Bit Score: 117.15  E-value: 6.28e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrpPEGMSPELPPrdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05148     82 ELMEKGSLLAFLRS---PEGQVLPVAS-----LIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARL 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLwVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRqqHVK 161
Cdd:cd05148    154 -IKEDVYLSSDKK-IPYKWTAPEAAS--HGTF-----STKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA--GYR 222
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  162 LARPrLKLPYAdyWYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05148    223 MPCP-AKCPQE--IYKIMLECWAaEPEDRPSFKALREEL 258
PTKc_Ror2 cd05091
Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor ...
3-199 1.01e-28

Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Ror proteins are orphan receptor PTKs (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. The Ror2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270673 [Multi-domain]  Cd Length: 284  Bit Score: 117.43  E-value: 1.01e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    3 FCQLGDLKRYLRAQRPPEGMSPELPPRDLR-TLQRMGL-----EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDY 76
Cdd:cd05091     90 YCSHGDLHEFLVMRSPHSDVGSTDDDKTVKsTLEPADFlhivtQIAAGMEYLSSHHVVHKDLATRNVLVFDKLNVKISDL 169
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   77 GLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVlafvvr 156
Cdd:cd05091    170 GLFREVYAADYYKLMGNSLLPIRWMSPEAI--MYGKF-----SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV------ 236
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198  157 qqhVKLARPRLKLPYAD----YWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd05091    237 ---IEMIRNRQVLPCPDdcpaWVYTLMLECWNEfPSRRPRFKDIHSRL 281
PTKc_DDR_like cd05097
Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the ...
2-191 1.17e-28

Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133228 [Multi-domain]  Cd Length: 295  Bit Score: 117.38  E-value: 1.17e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLrAQRPPEG---MSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd05097     97 EYMENGDLNQFL-SQREIEStftHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGM 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEF-GAQPYRHLSDEEVLA----- 152
Cdd:cd05097    176 SRNLYSGDYYRIQGRAVLPIRWMAWESI--LLGKF-----TTASDVWAFGVTLWEMFTLcKEQPYSLLSDEQVIEntgef 248
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  153 FVVRQQHVKLARPRLklpYADYWYDILQSCW-RPPAQRPS 191
Cdd:cd05097    249 FRNQGRQIYLSQTPL---CPSPVFKLMMRCWsRDIKDRPT 285
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
1-195 2.63e-28

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 113.90  E-value: 2.63e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd00180     70 MEYCEGGSLKDLLKENKGP--LSEE-------EALSILRQLLSALEYLHSNGIIHRDLKPENILLDSDGTVKLADFGLAK 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGElhgsfvlVDQSRESNVWSLGVTLWELFEFgaqpyrhlsdeevlafvvrqqhv 160
Cdd:cd00180    141 DLDSDDSLLKTTGGTTPPYYAPPELLGG-------RYYGPKVDIWSLGVILYELEEL----------------------- 190
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  161 klarprlklpyadywYDILQSCWRP-PAQRPSASDL 195
Cdd:cd00180    191 ---------------KDLIRRMLQYdPKKRPSAKEL 211
PTKc_Itk cd05112
Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs ...
2-200 2.67e-28

Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk, also known as Tsk or Emt, is a member of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. The Itk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133243 [Multi-domain]  Cd Length: 256  Bit Score: 115.05  E-value: 2.67e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPegMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05112     79 EFMEHGCLSDYLRTQRGL--FSAE-------TLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVVKVSDFGMTRF 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELlgelhgsFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVK 161
Cdd:cd05112    150 -VLDDQYTSSTGTKFPVKWSSPEV-------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI--NAGFR 219
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  162 LARPRLKlpyADYWYDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd05112    220 LYKPRLA---STHVYEIMNHCWKErPEDRPSFSLLLRQLA 256
PTKc_FGFR1 cd05098
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs ...
1-204 8.01e-28

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. FGFR1 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270678 [Multi-domain]  Cd Length: 302  Bit Score: 115.11  E-value: 8.01e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPeGM----SPELPPRDLRTLQRM---GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd05098     98 VEYASKGNLREYLQARRPP-GMeycyNPSHNPEEQLSSKDLvscAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 176
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVL 151
Cdd:cd05098    177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE---------ALFDRiyTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  152 AfVVRQQHvKLARPRlklPYADYWYDILQSCWRP-PAQRPSASDLQLQLTYLLS 204
Cdd:cd05098    248 K-LLKEGH-RMDKPS---NCTNELYMMMRDCWHAvPSQRPTFKQLVEDLDRIVA 296
PTKc_Fes cd05084
Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the ...
1-199 1.48e-27

Catalytic domain of the Protein Tyrosine Kinase, Fes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes (or Fps) is a cytoplasmic (or nonreceptor) PTK containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated PTK activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. The Fes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270667 [Multi-domain]  Cd Length: 252  Bit Score: 113.10  E-value: 1.48e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAqrppegmspELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05084     73 MELVQGGDFLTFLRT---------EGPRLKVKELIRMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSR 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHV 160
Cdd:cd05084    144 EEEDGVYAATGGMKQIPVKWTAPEALN--YGRY-----SSESDVWSFGILLWETFSLGAVPYANLSNQQTREAV--EQGV 214
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  161 KLARPRLklpYADYWYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05084    215 RLPCPEN---CPDEVYRLMEQCWEyDPRKRPSFSTVHQDL 251
PTKc_FGFR4 cd05099
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs ...
1-203 1.61e-27

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. FGFR4 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133230 [Multi-domain]  Cd Length: 314  Bit Score: 114.68  E-value: 1.61e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPeGMS-----PELPPRDL--RTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd05099     97 VEYAAKGNLREFLRARRPP-GPDytfdiTKVPEEQLsfKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKI 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgelhgsFVLVdQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAf 153
Cdd:cd05099    176 ADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL------FDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK- 247
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  154 VVRQQHvKLARPRlKLPYAdyWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd05099    248 LLREGH-RMDKPS-NCTHE--LYMLMRECWHAvPTQRPTFKQLVEALDKVL 294
PTKc_VEGFR cd05054
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
2-195 1.82e-27

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. VEGFR subfamily members are receptor PTKss (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. The VEGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270647 [Multi-domain]  Cd Length: 298  Bit Score: 114.12  E-value: 1.82e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPELPPRDLR-------------TLQRM---GLEIARGLAHLHSHNYVHSDLALRNCLL 65
Cdd:cd05054     92 EFCKFGNLSNYLRSKREEFVPYRDKGARDVEeeedddelykeplTLEDLicySFQVARGMEFLASRKCIHRDLAARNILL 171
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   66 TSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYR 143
Cdd:cd05054    172 SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE---------SIFDKvyTTQSDVWSFGVLLWEIFSLGASPYP 242
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  144 HLS-DEEvlaFVVRQQH-VKLARPRLKLPYAdywYDILQSCW-RPPAQRPSASDL 195
Cdd:cd05054    243 GVQmDEE---FCRRLKEgTRMRAPEYTTPEI---YQIMLDCWhGEPKERPTFSEL 291
PTKc_Src_like cd05034
Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
2-196 2.66e-27

Catalytic domain of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. The Src-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270630 [Multi-domain]  Cd Length: 248  Bit Score: 111.99  E-value: 2.66e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrpPEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05034     70 ELMSKGSLLDYLRT---GEGRALRLP-----QLIDMAAQIASGMAYLESRNYIHRDLAARNILVGENNVCKVADFGLARL 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPEllGELHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQqhVK 161
Cdd:cd05034    142 -IEDDEYTAREGAKFPIKWTAPE--AALYGRF-----TIKSDVWSFGILLYEIVTYGRVPYPGMTNREVLEQVERG--YR 211
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  162 LARPRlklPYADYWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd05034    212 MPKPP---GCPDELYDIMLQCWKKePEERPTFEYLQ 244
PTKc_Btk_Bmx cd05113
Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow ...
2-195 3.32e-27

Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor, leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. The Btk/Bmx subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173657 [Multi-domain]  Cd Length: 256  Bit Score: 111.90  E-value: 3.32e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRppEGMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahS 81
Cdd:cd05113     79 EYMANGCLLNYLREMR--KRFQTQ-------QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL--S 147
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 NYK-EDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVrqQHV 160
Cdd:cd05113    148 RYVlDDEYTSSVGSKFPVRWSPPEVL--MYSKF-----SSKSDVWAFGVLMWEVYSLGKMPYERFTNSETVEHVS--QGL 218
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  161 KLARPRLKlpyADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd05113    219 RLYRPHLA---SEKVYTIMYSCWHEkADERPTFKIL 251
PTKc_Axl cd05075
Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the ...
1-203 6.09e-27

Catalytic domain of the Protein Tyrosine Kinase, Axl; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. It is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. It is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Axl is a member of the TAM subfamily, composed of receptor PTKs (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to its ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. The Axl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270660 [Multi-domain]  Cd Length: 277  Bit Score: 112.02  E-value: 6.09e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpeGMSPELPPRdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05075     86 LPFMKHGDLHSFLLYSRL--GDCPVYLPT--QMLVKFMTDIASGMEYLSSKNFIHRDLAARNCMLNENMNVCVADFGLSK 161
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELLGELHgsfvlvdQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFvVRQQHv 160
Cdd:cd05075    162 KIYNGDYYRQGRISKMPVKWIAIESLADRV-------YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LRQGN- 232
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  161 klarpRLKLPY--ADYWYDILQSCWR-PPAQRPSASDLQLQLTYLL 203
Cdd:cd05075    233 -----RLKQPPdcLDGLYELMSSCWLlNPKDRPSFETLRCELEKIL 273
PTKc_Met_Ron cd05058
Catalytic domain of the Protein Tyrosine Kinases, Met and Ron; PTKs catalyze the transfer of ...
7-205 7.26e-27

Catalytic domain of the Protein Tyrosine Kinases, Met and Ron; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor PTKs (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. The Met/Ron subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270649 [Multi-domain]  Cd Length: 262  Bit Score: 111.03  E-value: 7.26e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    7 GDLKRYLRaqrppegmSPELPPrDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED 86
Cdd:cd05058     82 GDLRNFIR--------SETHNP-TVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   87 YYLTPERLWV--PLRWAAPELLgelhgsfvlvdQSR----ESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:cd05058    153 YYSVHNHTGAklPVKWMALESL-----------QTQkfttKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-- 219
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  161 KLARPRLklpYADYWYDILQSCWRP-PAQRPSASDLQLQLTYLLSE 205
Cdd:cd05058    220 RLLQPEY---CPDPLYEVMLSCWHPkPEMRPTFSELVSRISQIFST 262
PTKc_Frk_like cd05068
Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
31-199 2.60e-26

Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Frk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270653 [Multi-domain]  Cd Length: 267  Bit Score: 109.80  E-value: 2.60e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   31 LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllGELH 110
Cdd:cd05068    103 LPQLIDMAAQVASGMAYLESQNYIHRDLAARNVLVGENNICKVADFGLARVIKVEDEYEAREGAKFPIKWTAPE--AANY 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  111 GSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvklarpRLKLPYA--DYWYDILQSCWRP-PA 187
Cdd:cd05068    181 NRF-----SIKSDVWSFGILLTEIVTYGRIPYPGMTNAEVLQQVERGY-------RMPCPPNcpPQLYDIMLECWKAdPM 248
                          170
                   ....*....|..
gi 1720423198  188 QRPSASDLQLQL 199
Cdd:cd05068    249 ERPTFETLQWKL 260
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
1-199 2.95e-26

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 109.21  E-value: 2.95e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14014     79 MEYVEGGSLADLLRERGP-------LPPREAL---RILAQIADALAAAHRAGIVHRDIKPANILLTEDGRVKLTDFGIAR 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLrWAAPE-LLGElhgsfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQH 159
Cdd:cd14014    149 ALGDSGLTQTGSVLGTPA-YMAPEqARGG--------PVDPRSDIYSLGVVLYELLT-GRPPFDGDSPAAVLAKHLQEAP 218
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  160 VKLARPRLKLPYAdyWYDILQSCWRP-PAQRP-SASDLQLQL 199
Cdd:cd14014    219 PPPSPLNPDVPPA--LDAIILRALAKdPEERPqSAAELLAAL 258
PTKc_FGFR3 cd05100
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs ...
1-204 3.01e-26

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. FGFR3 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173652 [Multi-domain]  Cd Length: 334  Bit Score: 111.27  E-value: 3.01e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPeGM-----SPELPPRDL--RTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd05100     97 VEYASKGNLREYLRARRPP-GMdysfdTCKLPEEQLtfKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKI 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVL 151
Cdd:cd05100    176 ADFGLARDVHNIDYYKKTTNGRLPVKWMAPE---------ALFDRvyTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  152 AfVVRQQHvklarpRLKLPY--ADYWYDILQSCWRP-PAQRPSASDLQLQLTYLLS 204
Cdd:cd05100    247 K-LLKEGH------RMDKPAncTHELYMIMRECWHAvPSQRPTFKQLVEDLDRVLT 295
PTKc_Csk_like cd05039
Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
1-200 3.25e-26

Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of Csk, Chk, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. The Csk-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270635 [Multi-domain]  Cd Length: 256  Bit Score: 108.98  E-value: 3.25e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppegmSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05039     79 TEYMAKGSLVDYLR--------SRGRAVITRKDQLGFALDVCEGMEYLESKKFVHRDLAARNVLVSEDNVAKVSDFGLAK 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snyKEDYYLTPERLwvPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:cd05039    151 ---EASSNQDGGKL--PIKWTAPEALR--EKKF-----STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-- 216
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  161 klarpRLKLPYA--DYWYDILQSCWR-PPAQRPSASDLQLQLT 200
Cdd:cd05039    217 -----RMEAPEGcpPEVYKVMKNCWElDPAKRPTFKQLREKLE 254
PTKc_Fer cd05085
Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; ...
1-200 5.85e-26

Catalytic domain of the Protein Tyrosine Kinase, Fer; Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells.


Pssm-ID: 270668 [Multi-domain]  Cd Length: 251  Bit Score: 108.17  E-value: 5.85e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspELpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05085     72 MELVPGGDFLSFLRKKKD------EL---KTKQLVKFSLDAAAGMAYLESKNCIHRDLAARNCLVGENNALKISDFGMSR 142
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snyKED--YYLTPERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQ 158
Cdd:cd05085    143 ---QEDdgVYSSSGLKQIPIKWTAPEALN--YGRY-----SSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQV--EK 210
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  159 HVKLARPRlKLPyaDYWYDILQSCWR-PPAQRPSASDLQLQLT 200
Cdd:cd05085    211 GYRMSAPQ-RCP--EDIYKIMQRCWDyNPENRPKFSELQKELA 250
PTKc_FGFR2 cd05101
Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs ...
1-204 1.29e-25

Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. FGFR2 is part of the FGFR subfamily, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. The FGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270679 [Multi-domain]  Cd Length: 313  Bit Score: 108.95  E-value: 1.29e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPE-------GMSPElPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd05101    109 VEYASKGNLREYLRARRPPGmeysydiNRVPE-EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 187
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVL 151
Cdd:cd05101    188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPE---------ALFDRvyTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  152 AfVVRQQHvklarpRLKLPY--ADYWYDILQSCWRP-PAQRPSASDLQLQLTYLLS 204
Cdd:cd05101    259 K-LLKEGH------RMDKPAncTNELYMMMRDCWHAvPSQRPTFKQLVEDLDRILT 307
PTKc_PDGFR cd05055
Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; ...
2-205 1.39e-25

Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. They are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. The PDGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase .


Pssm-ID: 133186 [Multi-domain]  Cd Length: 302  Bit Score: 108.73  E-value: 1.39e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRppEGMSpelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05055    119 EYCCYGDLLNFLRRKR--ESFL------TLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 NYKEDYYLTPERLWVPLRWAAPELLgeLHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHvK 161
Cdd:cd05055    191 IMNDSNYVVKGNARLPVKWMAPESI--FNCVYTF-----ESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-R 262
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  162 LARPRlklpYA-DYWYDILQSCWR-PPAQRPSASdlqlQLTYLLSE 205
Cdd:cd05055    263 MAQPE----HApAEIYDIMKTCWDaDPLKRPTFK----QIVQLIGK 300
PTKc_FAK cd05056
Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the ...
1-205 4.11e-25

Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) PTK that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. The FAK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133187 [Multi-domain]  Cd Length: 270  Bit Score: 106.35  E-value: 4.11e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspELPprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05056     85 MELAPLGELRSYLQVNKY------SLD---LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSR 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYlTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHV 160
Cdd:cd05056    156 YMEDESYY-KASKGKLPIKWMAPE-------SINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI--ENGE 225
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  161 KLARPRLKLPYAdywYDILQSCWR-PPAQRPSASDLQLQLTYLLSE 205
Cdd:cd05056    226 RLPMPPNCPPTL---YSLMTKCWAyDPSKRPRFTELKAQLSDILQE 268
PTKc_Tec_Rlk cd05114
Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular ...
2-203 4.26e-25

Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec-like subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members except Rlk also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec-like subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. The Tec/Rlk subfamily is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270685 [Multi-domain]  Cd Length: 260  Bit Score: 106.10  E-value: 4.26e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPegMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05114     79 EFMENGCLLNYLRQRRGK--LSRDM-------LLSMCQDVCEGMEYLERNNFIHRDLAARNCLVNDTGVVKVSDFGMTRY 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELlgelhgsFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvK 161
Cdd:cd05114    150 -VLDDQYTSSSGAKFPVKWSPPEV-------FNYSKFSSKSDVWSFGVLMWEVFTEGKMPFESKSNYEVVEMVSRGH--R 219
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  162 LARPRLKlpyADYWYDILQSCWR-PPAQRPSASDLQLQLTYLL 203
Cdd:cd05114    220 LYRPKLA---SKSVYEVMYSCWHeKPEGRPTFADLLRTITEIA 259
PTKc_EGFR_like cd05057
Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs ...
2-195 6.55e-25

Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. They are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270648 [Multi-domain]  Cd Length: 279  Bit Score: 105.96  E-value: 6.55e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMspelpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05057     88 QLMPLGCLLDYVRNHRDNIGS---------QLLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPNHVKITDFGLAKL 158
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 -NYKEDYYLTPERLwVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhv 160
Cdd:cd05057    159 lDVDEKEYHAEGGK-VPIKWMALESI--QYRIY-----THKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-- 228
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  161 KLARPrlKLPYADYwYDILQSCWRPPAQ-RPSASDL 195
Cdd:cd05057    229 RLPQP--PICTIDV-YMVLVKCWMIDAEsRPTFKEL 261
PTKc_Chk cd05083
Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the ...
1-199 1.01e-24

Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). Chk inhibits Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Like Csk, it is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases that are anchored to the plasma membrane, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. The Chk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270666 [Multi-domain]  Cd Length: 254  Bit Score: 104.57  E-value: 1.01e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppeGMSPELPPRdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05083     77 MELMSKGNLVNFLRSR----GRALVPVIQ----LLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKISDFGLAK 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDyyltpERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHV 160
Cdd:cd05083    149 VGSMGV-----DNSRLPVKWTAPEALK--NKKF-----SSKSDVWSYGVLLWEVFSYGRAPYPKMSVKEVKEAV--EKGY 214
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  161 KLARPRLKLPYAdywYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05083    215 RMEPPEGCPPDV---YSIMTSCWEaEPGKRPSFKKLREKL 251
PTKc_Syk cd05116
Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the ...
1-199 1.25e-24

Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. It is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for EGFR signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). The Syk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133247 [Multi-domain]  Cd Length: 257  Bit Score: 104.66  E-value: 1.25e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05116     74 MEMAELGPLNKFLQKNR-------HVTEKNITELVH---QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKEDYYLTPERLWVPLRWAAPELLGELhgSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQh 159
Cdd:cd05116    144 AlRADENYYKAQTHGKWPVKWYAPECMNYY--KF-----SSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIEKGE- 215
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  160 vklarpRLKLPYA--DYWYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05116    216 ------RMECPAGcpPEMYDLMKLCWTyDVDERPGFAAVELRL 252
PTKc_Lyn cd05072
Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the ...
2-196 1.69e-24

Catalytic domain of the Protein Tyrosine Kinase, Lyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lyn subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270657 [Multi-domain]  Cd Length: 272  Bit Score: 104.74  E-value: 1.69e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05072     82 EYMAKGSLLDFLKSD---EGGKVLLP-----KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELLGelHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVK 161
Cdd:cd05072    154 -IEDNEYTAREGAKFPIKWTAPEAIN--FGSFTI-----KSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL--QRGYR 223
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  162 LARPRlKLPyaDYWYDILQSCWR-PPAQRPSASDLQ 196
Cdd:cd05072    224 MPRME-NCP--DELYDIMKTCWKeKAEERPTFDYLQ 256
PTKc_EphR cd05033
Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of ...
1-203 2.66e-24

Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EphB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis.The EphR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270629 [Multi-domain]  Cd Length: 266  Bit Score: 103.99  E-value: 2.66e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppEGMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd05033     84 TEYMENGSLDKFLREND--GKFTVT-------QLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSDLVCKVSDFGLSr 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERLwVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQH 159
Cdd:cd05033    155 RLEDSEATYTTKGGK-IPIRWTAPEAIA--YRKF-----TSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV--EDG 224
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  160 VKLARPRlKLPYAdyWYDILQSCW-RPPAQRPSASDLQLQLTYLL 203
Cdd:cd05033    225 YRLPPPM-DCPSA--LYQLMLDCWqKDRNERPTFSQIVSTLDKMI 266
PTKc_VEGFR3 cd05102
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; ...
1-205 2.15e-23

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. VEGFR3 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270680 [Multi-domain]  Cd Length: 336  Bit Score: 102.75  E-value: 2.15e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppEGMSP--ELPPRDLRTLQRM----------------------------------------- 37
Cdd:cd05102     91 VEFCKYGNLSNFLRAKR--EGFSPyrERSPRTRSQVRSMveavradrrsrqgsdrvasftestsstnqprqevddlwqsp 168
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   38 ---------GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLge 108
Cdd:cd05102    169 ltmedlicySFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI-- 246
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  109 lhgsFVLVDQSrESNVWSLGVTLWELFEFGAQPYRHLS-DEEvlaFVVR-QQHVKLARPRLKLPYAdywYDILQSCWR-P 185
Cdd:cd05102    247 ----FDKVYTT-QSDVWSFGVLLWEIFSLGASPYPGVQiNEE---FCQRlKDGTRMRAPEYATPEI---YRIMLSCWHgD 315
                          250       260
                   ....*....|....*....|
gi 1720423198  186 PAQRPSASDLQLQLTYLLSE 205
Cdd:cd05102    316 PKERPTFSDLVEILGDLLQE 335
PTKc_VEGFR1 cd14207
Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; ...
28-195 2.37e-23

Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR1 (or Flt1) binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. VEGFR1 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271109 [Multi-domain]  Cd Length: 340  Bit Score: 102.77  E-value: 2.37e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   28 PRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllg 107
Cdd:cd14207    176 PLTMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDARLPLKWMAPE--- 252
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  108 elhgsfVLVDQ--SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhVKLARPRLKLPYAdywYDILQSCWR- 184
Cdd:cd14207    253 ------SIFDKiySTKSDVWSYGVLLWEIFSLGASPYPGVQIDEDFCSKLKEG-IRMRAPEFATSEI---YQIMLDCWQg 322
                          170
                   ....*....|.
gi 1720423198  185 PPAQRPSASDL 195
Cdd:cd14207    323 DPNERPRFSEL 333
PTKc_Csk cd05082
Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the ...
2-202 5.52e-23

Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Csk is a cytoplasmic (or nonreceptor) PTK containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. The Csk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133213 [Multi-domain]  Cd Length: 256  Bit Score: 99.67  E-value: 5.52e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppeGMSPelppRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhs 81
Cdd:cd05082     80 EYMAKGSLVDYLRSR----GRSV----LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT-- 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nykEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVK 161
Cdd:cd05082    150 ---KEASSTQDTGKLPVKWTAPEALRE--KKF-----STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV--EKGYK 217
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  162 LARPRLKLPYAdywYDILQSCWR-PPAQRPSASDLQLQLTYL 202
Cdd:cd05082    218 MDAPDGCPPAV---YDVMKNCWHlDAAMRPSFLQLREQLEHI 256
PTKc_VEGFR2 cd05103
Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; ...
39-203 5.64e-23

Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 is a member of the VEGFR subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The VEGFR2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270681 [Multi-domain]  Cd Length: 343  Bit Score: 101.98  E-value: 5.64e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPEllgelhgsfVLVDQ 118
Cdd:cd05103    186 FQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE---------TIFDR 256
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  119 --SRESNVWSLGVTLWELFEFGAQPYRHLS-DEEvlaFVVRQQHvklaRPRLKLPyaDY----WYDILQSCWR-PPAQRP 190
Cdd:cd05103    257 vyTIQSDVWSFGVLLWEIFSLGASPYPGVKiDEE---FCRRLKE----GTRMRAP--DYttpeMYQTMLDCWHgEPSQRP 327
                          170
                   ....*....|...
gi 1720423198  191 SASDLQLQLTYLL 203
Cdd:cd05103    328 TFSELVEHLGNLL 340
PTKc_RET cd05045
Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs ...
1-203 5.83e-23

Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor PTK (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma. The RET subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173631 [Multi-domain]  Cd Length: 290  Bit Score: 100.42  E-value: 5.83e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP--PEGM------------SPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT 66
Cdd:cd05045     82 VEYAKYGSLRSFLRESRKvgPSYLgsdgnrnssyldNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA 161
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   67 SDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLGElHgsfvlvDQSRESNVWSLGVTLWELFEFGAQPYRHLS 146
Cdd:cd05045    162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-H------IYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198  147 DEEVlaFVVRQQHVKLARPRlklPYADYWYDILQSCWR-PPAQRPSASDLQLQLTYLL 203
Cdd:cd05045    235 PERL--FNLLKTGYRMERPE---NCSEEMYNLMLTCWKqEPDKRPTFADISKELEKMM 287
PTKc_PDGFR_beta cd05107
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; ...
23-203 2.11e-22

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. The PDGFR beta subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133238 [Multi-domain]  Cd Length: 401  Bit Score: 101.24  E-value: 2.11e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   23 SPELPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAA 102
Cdd:cd05107    233 SPALSYMDLVGFS---YQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMA 309
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  103 PE-LLGELHGSFvlvdqsreSNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHvKLARPRLKlpyADYWYDILQS 181
Cdd:cd05107    310 PEsIFNNLYTTL--------SDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGY-RMAKPAHA---SDEIYEIMQK 377
                          170       180
                   ....*....|....*....|...
gi 1720423198  182 CWRPPAQ-RPSASDLQLQLTYLL 203
Cdd:cd05107    378 CWEEKFEiRPDFSQLVHLVGDLL 400
PTKc_Zap-70 cd05115
Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa; PTKs ...
1-183 4.40e-22

Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a cytoplasmic (or nonreceptor) PTK containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. The Zap-70 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270686 [Multi-domain]  Cd Length: 269  Bit Score: 97.32  E-value: 4.40e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05115     82 MEMASGGPLNKFLSGKKD------EITVSNVVELMH---QVSMGMKYLEEKNFVHRDLAARNVLLVNQHYAKISDFGLSK 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERL--WvPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQ 158
Cdd:cd05115    153 ALGADDSYYKARSAgkW-PLKWYAPECI--NFRKF-----SSRSDVWSYGVTMWEAFSYGQKPYKKMKGPEVMSFIEQGK 224
                          170       180
                   ....*....|....*....|....*..
gi 1720423198  159 hvklarpRLKLPYA--DYWYDILQSCW 183
Cdd:cd05115    225 -------RMDCPAEcpPEMYALMSDCW 244
PTK_HER3 cd05111
Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR ...
6-200 6.52e-22

Pseudokinase domain of the Protein Tyrosine Kinase, HER3; HER3 (ErbB3) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 contains an impaired tyr kinase domain, which lacks crucial residues for catalytic activity against exogenous substrates but is still able to bind ATP and autophosphorylate. HER3 binds the neuregulin ligands, NRG1 and NRG2, and it relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. The HER3 subfamily is part of a larger superfamily that includes other pseudokinases and the the catalytic domains of active kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173656 [Multi-domain]  Cd Length: 279  Bit Score: 97.33  E-value: 6.52e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    6 LGDLKRYLRAQRppEGMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE 85
Cdd:cd05111     92 LGSLLDHVRQHR--GSLGPQL-------LLNWCVQIAKGMYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGVADLLYPD 162
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   86 DYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvKLARP 165
Cdd:cd05111    163 DKKYFYSEAKTPIKWMALE-------SIHFGKYTHQSDVWSYGVTVWEMMTFGAEPYAGMRLAEVPDLLEKGE--RLAQP 233
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  166 RLKLPYAdywYDILQSCWRPPAQ-RPSASDLQLQLT 200
Cdd:cd05111    234 QICTIDV---YMVMVKCWMIDENiRPTFKELANEFT 266
PTKc_CSF-1R cd05106
Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs ...
24-205 6.58e-22

Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. The CSF-1R subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133237 [Multi-domain]  Cd Length: 374  Bit Score: 99.15  E-value: 6.58e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   24 PELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAP 103
Cdd:cd05106    204 EDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP 283
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  104 EllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHvKLARPRLKLPYAdywYDILQSCW 183
Cdd:cd05106    284 E-------SIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY-QMSRPDFAPPEI---YSIMKMCW 352
                          170       180
                   ....*....|....*....|...
gi 1720423198  184 R-PPAQRPSASdlqlQLTYLLSE 205
Cdd:cd05106    353 NlEPTERPTFS----QISQLIQR 371
PTKc_EphR_A2 cd05063
Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the ...
2-203 1.18e-21

Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 133194 [Multi-domain]  Cd Length: 268  Bit Score: 96.20  E-value: 1.18e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGmspelpprDLRTLQRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLa 79
Cdd:cd05063     86 EYMENGALDKYLRDH---DG--------EFSSYQLVGMlrGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGL- 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 hSNYKEDYyltPERLW------VPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAF 153
Cdd:cd05063    154 -SRVLEDD---PEGTYttsggkIPIRWTAPEAIA--YRKF-----TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKA 222
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  154 VvrQQHVKLARPrLKLPYAdyWYDILQSCW-RPPAQRPSASDLQLQLTYLL 203
Cdd:cd05063    223 I--NDGFRLPAP-MDCPSA--VYQLMLQCWqQDRARRPRFVDIVNLLDKLL 268
PTKc_Abl cd05052
Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of ...
2-199 1.34e-21

Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) PTK that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. The Abl subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270645 [Multi-domain]  Cd Length: 263  Bit Score: 95.95  E-value: 1.34e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEgmspeLPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05052     82 EFMPYGNLLDYLRECNREE-----LNAV---VLLYMATQIASAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVK 161
Cdd:cd05052    154 -MTGDTYTAHAGAKFPIKWTAPESLA--YNKF-----SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL--EKGYR 223
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  162 LARPRLKLPYAdywYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd05052    224 MERPEGCPPKV---YELMRACWQwNPSDRPSFAEIHQAL 259
PTKc_Jak1_rpt2 cd05079
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the ...
1-195 4.24e-21

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak1 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173644 [Multi-domain]  Cd Length: 284  Bit Score: 95.00  E-value: 4.24e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraqrppegmspelpPRD-----LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd05079     87 MEFLPSGSLKEYL--------------PRNknkinLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAHS-NYKEDYYLTPERLWVPLRWAAPELLgeLHGSFVlvdqsRESNVWSLGVTLWELFEFGAQPYRHLSdeeVLAFV 154
Cdd:cd05079    153 FGLTKAiETDKEYYTVKDDLDSPVFWYAPECL--IQSKFY-----IASDVWSFGVTLYELLTYCDSESSPMT---LFLKM 222
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  155 VRQQHVKLARPRL--------KLPY----ADYWYDILQSCWR-PPAQRPSASDL 195
Cdd:cd05079    223 IGPTHGQMTVTRLvrvleegkRLPRppncPEEVYQLMRKCWEfQPSKRTTFQNL 276
PTKc_Jak2_rpt2 cd14205
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the ...
1-199 1.14e-20

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 is widely expressed in many tissues and is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271107 [Multi-domain]  Cd Length: 284  Bit Score: 93.54  E-value: 1.14e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspelppRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14205     86 MEYLPYGSLRDYLQKHKER---------IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEFG-------AQPYRHLSDEEVLA 152
Cdd:cd14205    157 VlPQDKEYYKVKEPGESPIFWYAPESLTE--SKF-----SVASDVWSFGVVLYELFTYIeksksppAEFMRMIGNDKQGQ 229
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198  153 FVVRQQhVKLARPRLKLPYAD----YWYDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd14205    230 MIVFHL-IELLKNNGRLPRPDgcpdEIYMIMTECWNNnVNQRPSFRDLALRV 280
PTKc_Jak3_rpt2 cd05081
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the ...
1-202 1.18e-20

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 3; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270665 [Multi-domain]  Cd Length: 283  Bit Score: 93.80  E-value: 1.18e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraQRPPEGMSPelpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05081     86 MEYLPSGCLRDFL--QRHRARLDA-------SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEF-------GAQPYRHLSDEEVLA 152
Cdd:cd05081    157 LlPLDKDYYVVREPGQSPIFWYAPESLSD--NIF-----SRQSDVWSFGVVLYELFTYcdkscspSAEFLRMMGCERDVP 229
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  153 FVVRQQHVKLARPRLKLPYA--DYWYDILQSCWRP-PAQRPSASDLQLQLTYL 202
Cdd:cd05081    230 ALCRLLELLEEGQRLPAPPAcpAEVHELMKLCWAPsPQDRPSFSALGPQLDML 282
PTKc_Tyk2_rpt2 cd05080
Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze ...
1-195 1.34e-20

Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Tyk2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270664 [Multi-domain]  Cd Length: 283  Bit Score: 93.43  E-value: 1.34e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraqrPPEGMSpelpprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd05080     87 MEYVPLGSLRDYL----PKHSIG-------LAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAk 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERLWVPLRWAAPELLGELHGSFVlvdqsreSNVWSLGVTLWELF----EFGAQPYRHLSDEEVLAFVV 155
Cdd:cd05080    156 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-------SDVWSFGVTLYELLthcdSSQSPPTKFLEMIGIAQGQM 228
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  156 RQ-QHVKLARPRLKLPYADYW----YDILQSCWRP-PAQRPSASDL 195
Cdd:cd05080    229 TVvRLIELLERGERLPCPDKCpqevYHLMKNCWETeASFRPTFENL 274
PTKc_Hck cd05073
Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the ...
2-196 3.51e-20

Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of G-CSF-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes. Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Hck subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270658 [Multi-domain]  Cd Length: 265  Bit Score: 91.63  E-value: 3.51e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05073     85 EFMAKGSLLDFLKSD---EGSKQPLP-----KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELLGelHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHVk 161
Cdd:cd05073    157 -IEDNEYTAREGAKFPIKWTAPEAIN--FGSFTI-----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM- 227
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  162 larPRLKlPYADYWYDILQSCWR-PPAQRPSASDLQ 196
Cdd:cd05073    228 ---PRPE-NCPEELYNIMMRCWKnRPEERPTFEYIQ 259
PTKc_Tie1 cd05089
Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; ...
1-203 3.62e-20

Catalytic domain of the Protein Tyrosine Kinase, Tie1; Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development.


Pssm-ID: 270671 [Multi-domain]  Cd Length: 297  Bit Score: 92.37  E-value: 3.62e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPE---------GMSPELPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTV 71
Cdd:cd05089     82 IEYAPYGNLLDFLRKSRVLEtdpafakehGTASTLTSQQL---LQFASDVAKGMQYLSEKQFIHRDLAARNVLVGENLVS 158
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLAHSnykEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVl 151
Cdd:cd05089    159 KIADFGLSRG---EEVYVKKTMGRLPVRWMAIE-------SLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL- 227
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  152 aFVVRQQHVKLARPRlklPYADYWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd05089    228 -YEKLPQGYRMEKPR---NCDDEVYELMRQCWRDrPYERPPFSQISVQLSRML 276
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
1-421 4.12e-20

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 95.08  E-value: 4.12e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:COG0515     86 MEYVEGESLADLLRRRGP-------LPPAEAL---RILAQLAEALAAAHAAGIVHRDIKPANILLTPDGRVKLIDFGIAR 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPlRWAAPE-LLGElhgsfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQH 159
Cdd:COG0515    156 ALGGATLTQTGTVVGTP-GYMAPEqARGE--------PVDPRSDVYSLGVTLYELLT-GRPPFDGDSPAELLRAHLREPP 225
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  160 VKLARPRLKLPYAdyWYDILQSCWRP-PAQRP-SASDLQLQLtyllsERPPRPPPPPPPPRDGPFPWPWPPSHSAPRPGT 237
Cdd:COG0515    226 PPPSELRPDLPPA--LDAIVLRALAKdPEERYqSAAELAAAL-----RAVLRSLAAAAAAAAAAAAAAAAAAAAAAAAAA 298
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  238 LSSQFPLLDGFPGADPDDVLTVTESSRGLNLECLWEKARRGAGRGGGAPPWQPASAPPAPHTNPSNPFYEALSTPSVLPV 317
Cdd:COG0515    299 AAAAAAAAAAAAAAAAAAAAAAAAPAAAAAAAAAAAALAAAAAAAAAAAAAALLAAAAALAAAAAAAAAAAAAAAAAAAA 378
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  318 ISARSPSVSSEYYIRLEEHGSPPEPLFPNDWDPLDPGVPGPQAPQTPSEVPQLVSETWASPLFPAPRPFPAQSSGSGGFL 397
Cdd:COG0515    379 AAAAAALAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAARLLAAAAAAAAAAAAA 458
                          410       420
                   ....*....|....*....|....
gi 1720423198  398 LSGWDPEGRGAGETLAGDPAEVLG 421
Cdd:COG0515    459 PLLAALLAAAALAAAAAAAALALA 482
PTKc_Tie cd05047
Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
1-203 7.14e-20

Catalytic domain of Tie Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins, consisting of Tie1 and Tie2, are receptor PTKs (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. The Tie subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270641 [Multi-domain]  Cd Length: 270  Bit Score: 90.87  E-value: 7.14e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPE---------GMSPELPPRDLrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTV 71
Cdd:cd05047     75 IEYAPHGNLLDFLRKSRVLEtdpafaianSTASTLSSQQL---LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLAHSnykEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVl 151
Cdd:cd05047    152 KIADFGLSRG---QEVYVKKTMGRLPVRWMAIE-------SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL- 220
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  152 aFVVRQQHVKLARPrlkLPYADYWYDILQSCWRP-PAQRPSASDLQLQLTYLL 203
Cdd:cd05047    221 -YEKLPQGYRLEKP---LNCDDEVYDLMRQCWREkPYERPSFAQILVSLNRML 269
PTKc_Kit cd05104
Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the ...
30-191 1.35e-19

Catalytic domain of the Protein Tyrosine Kinase, Kit; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. The Kit subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270682 [Multi-domain]  Cd Length: 375  Bit Score: 92.27  E-value: 1.35e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLGEL 109
Cdd:cd05104    212 DTEDLLSFSYQVAKGMEFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFEC 291
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  110 HGSFvlvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHvKLARPRLKLPYAdywYDILQSCWRP-PAQ 188
Cdd:cd05104    292 VYTF-------ESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY-RMDSPEFAPSEM---YDIMRSCWDAdPLK 360

                   ...
gi 1720423198  189 RPS 191
Cdd:cd05104    361 RPT 363
PTKc_PDGFR_alpha cd05105
Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; ...
40-191 4.12e-19

Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor PTK (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome and chronic eosinophilic leukemia. The PDGFR alpha subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173653 [Multi-domain]  Cd Length: 400  Bit Score: 91.24  E-value: 4.12e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPE-LLGELHGSFvlvdq 118
Cdd:cd05105    245 QVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPEsIFDNLYTTL----- 319
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  119 sreSNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHvKLARPRLKlpyADYWYDILQSCWR-PPAQRPS 191
Cdd:cd05105    320 ---SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGY-RMAKPDHA---TQEVYDIMVKCWNsEPEKRPS 386
PTKc_Lck_Blk cd05067
Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs ...
2-196 4.86e-19

Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Lck/Blk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270652 [Multi-domain]  Cd Length: 264  Bit Score: 88.41  E-value: 4.86e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrpPEGMspELPprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05067     81 EYMENGSLVDFLKT---PSGI--KLT---INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPELLGelHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQqhVK 161
Cdd:cd05067    153 -IEDNEYTAREGAKFPIKWTAPEAIN--YGTFTI-----KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--YR 222
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  162 LARPRlKLPYAdyWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd05067    223 MPRPD-NCPEE--LYQLMRLCWKErPEDRPTFEYLR 255
PTKc_Src_Fyn_like cd14203
Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the ...
2-196 6.67e-19

Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily includes a subset of Src-like PTKs including Src, Fyn, Yrk, and Yes, which are all widely expressed. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. They are also implicated in acute inflammatory responses and osteoclast function. The Src/Fyn-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271105 [Multi-domain]  Cd Length: 248  Bit Score: 87.66  E-value: 6.67e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrpPEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd14203     69 EFMSKGSLLDFLKD---GEGKYLKLP-----QLVDMAAQIASGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARL 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPEllGELHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHVK 161
Cdd:cd14203    141 -IEDNEYTARQGAKFPIKWTAPE--AALYGRFTI-----KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 212
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  162 LAR---PRLklpyadywYDILQSCWR-PPAQRPSASDLQ 196
Cdd:cd14203    213 CPPgcpESL--------HELMCQCWRkDPEERPTFEYLQ 243
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
1-195 3.75e-18

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 85.33  E-value: 3.75e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd05122     76 MEFCSGGSLKDLLKNTNKT------LTEQQIAYVCK---EVLKGLEYLHSHGIIHRDIKAANILLTSDGEVKLIDFGLSa 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 ---HSNYKEDYYLTPErlwvplrWAAPE-LLGELHGSfvlvdqsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd05122    147 qlsDGKTRNTFVGTPY-------WMAPEvIQGKPYGF--------KADIWSLGITAIEMAE-GKPPYSELPPMKALFLIA 210
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  156 RQQHVKLARPRLklpYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd05122    211 TNGPPGLRNPKK---WSKEFKDFLKKCLQKdPEKRPTAEQL 248
PTKc_Tie2 cd05088
Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the ...
1-205 5.28e-18

Catalytic domain of the Protein Tyrosine Kinase, Tie2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor PTK (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. The Tie2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133219 [Multi-domain]  Cd Length: 303  Bit Score: 86.20  E-value: 5.28e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEgMSPE--LPPRDLRTLQRMGL-----EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd05088     87 IEYAPHGNLLDFLRKSRVLE-TDPAfaIANSTASTLSSQQLlhfaaDVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 165
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSnykEDYYLTPERLWVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVlaF 153
Cdd:cd05088    166 ADFGLSRG---QEVYVKKTMGRLPVRWMAIE-------SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--Y 233
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  154 VVRQQHVKLARPrlkLPYADYWYDILQSCWR-PPAQRPSASDLQLQLTYLLSE 205
Cdd:cd05088    234 EKLPQGYRLEKP---LNCDDEVYDLMRQCWReKPYERPSFAQILVSLNRMLEE 283
PTKc_EphR_A cd05066
Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze ...
41-195 1.08e-17

Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10. Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphA receptors and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. EphRs comprise the largest subfamily of receptor PTKs (RTKs). EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270651 [Multi-domain]  Cd Length: 267  Bit Score: 84.53  E-value: 1.08e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSNYKEDyylTPERLW------VPLRWAAPELLGelHGSFv 114
Cdd:cd05066    115 IASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGL--SRVLED---DPEAAYttrggkIPIRWTAPEAIA--YRKF- 186
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQHVKLARPrLKLPYAdyWYDILQSCW-RPPAQRPSAS 193
Cdd:cd05066    187 ----TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI--EEGYRLPAP-MDCPAA--LHQLMLDCWqKDRNERPKFE 257

                   ..
gi 1720423198  194 DL 195
Cdd:cd05066    258 QI 259
PTKc_EphR_B cd05065
Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze ...
2-195 2.42e-17

Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EphB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphB receptors play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of colon cancer progression. EphRs comprise the largest subfamily of receptor PTKs (RTKs). They contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. The EphB subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173638 [Multi-domain]  Cd Length: 269  Bit Score: 83.38  E-value: 2.42e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahS 81
Cdd:cd05065     85 EFMENGALDSFLRQN---DG---QFTVIQLVGMLR---GIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGL--S 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 NYKEDYYLTPERLW-----VPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvr 156
Cdd:cd05065    154 RFLEDDTSDPTYTSslggkIPIRWTAPEAIA--YRKF-----TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-- 224
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  157 QQHVKLARPrLKLPYAdyWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd05065    225 EQDYRLPPP-MDCPTA--LHQLMLDCWqKDRNLRPKFGQI 261
PTKc_EGFR cd05108
Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor; PTKs ...
39-200 3.70e-17

Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a receptor PTK (RTK) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. The EGFR subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270683 [Multi-domain]  Cd Length: 313  Bit Score: 83.92  E-value: 3.70e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdq 118
Cdd:cd05108    116 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI--LHRIY----- 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  119 SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHVklarPRLKLPYADYwYDILQSCWR-PPAQRPSASDLQL 197
Cdd:cd05108    189 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----PQPPICTIDV-YMIMVKCWMiDADSRPKFRELII 263

                   ...
gi 1720423198  198 QLT 200
Cdd:cd05108    264 EFS 266
PTKc_HER2 cd05109
Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the ...
39-202 7.75e-17

Catalytic domain of the Protein Tyrosine Kinase, HER2; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 (ErbB2, HER2/neu) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner of other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. The HER2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270684 [Multi-domain]  Cd Length: 279  Bit Score: 82.38  E-value: 7.75e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLgeLHGSFvlvdq 118
Cdd:cd05109    116 VQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI--LHRRF----- 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  119 SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvKLARPRLKLPYAdywYDILQSCWR-PPAQRPSASDLQL 197
Cdd:cd05109    189 THQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE--RLPQPPICTIDV---YMIMVKCWMiDSECRPRFRELVD 263

                   ....*
gi 1720423198  198 QLTYL 202
Cdd:cd05109    264 EFSRM 268
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
1-195 1.23e-15

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 78.33  E-value: 1.23e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRMgleIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLah 80
Cdd:cd06606     78 LEYVPGGSLASLLKKFGK-------LPEPVVRKYTRQ---ILEGLEYLHSNGIVHRDIKGANILVDSDGVVKLADFGC-- 145
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWV---PlRWAAPELL-GELHGsfvlvdqsRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFvvr 156
Cdd:cd06606    146 AKRLAEIATGEGTKSLrgtP-YWMAPEVIrGEGYG--------RAADIWSLGCTVIEMAT-GKPPWSELGNPVAALF--- 212
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  157 qqhvKLARPRLKLPYADYW----YDILQSCWRP-PAQRPSASDL 195
Cdd:cd06606    213 ----KIGSSGEPPPIPEHLseeaKDFLRKCLQRdPKKRPTADEL 252
STKc_MLK2 cd14148
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the ...
1-200 2.47e-15

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK2 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K10. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK2 is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK2 also binds to normal huntingtin (Htt), which is important in neuronal transcription, development, and survival. MLK2 does not bind to the polyglutamine-expanded Htt, which is implicated in the pathogeneis of Huntington's disease, leading to neuronal toxicity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 271050 [Multi-domain]  Cd Length: 258  Bit Score: 77.33  E-value: 2.47e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspeLPPRdlrTLQRMGLEIARGLAHLHSHNYV---HSDLALRNCLLT--------SDL 69
Cdd:cd14148     72 MEYARGGALNRALAGKK--------VPPH---VLVNWAVQIARGMNYLHNEAIVpiiHRDLKSSNILILepienddlSGK 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 TVRIGDYGLAhsnyKEDYYLTPERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLsDEE 149
Cdd:cd14148    141 TLKITDFGLA----REWHKTTKMSAAGTYAWMAPEVIR--LSLF-----SKSSDVWSFGVLLWELLT-GEVPYREI-DAL 207
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  150 VLAFVVRQQHVKLARPRL-KLPYAdywyDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd14148    208 AVAYGVAMNKLTLPIPSTcPEPFA----RLLEECWDPdPHGRPDFGSILKRLE 256
PTKc_EphR_A10 cd05064
Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10; PTKs catalyze the ...
1-203 4.45e-15

Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The EphA10 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133195 [Multi-domain]  Cd Length: 266  Bit Score: 76.89  E-value: 4.45e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppEGmspelpprDLRTLQRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd05064     85 TEYMSNGALDSFLRKH---EG--------QLVAGQLMGMlpGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRR 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTpERLWVPLRWAAPELLGelHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVvrQQ 158
Cdd:cd05064    154 LQEDKSEAIYTT-MSGKSPVLWAAPEAIQ--YHHF-----SSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV--ED 223
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  159 HVKLARPRLKLPYAdywYDILQSCW-RPPAQRPSASDLQLQLTYLL 203
Cdd:cd05064    224 GFRLPAPRNCPNLL---HQLMLDCWqKERGERPRFSQIHSILSKMV 266
STKc_LKB1_CaMKK cd14008
Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent ...
1-196 9.93e-15

Catalytic domain of the Serine/Threonine kinases, Liver Kinase B1, Calmodulin Dependent Protein Kinase Kinase, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Both LKB1 and CaMKKs can phosphorylate and activate AMP-activated protein kinase (AMPK). LKB1, also called STK11, serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMPK. Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The LKB1/CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270910 [Multi-domain]  Cd Length: 267  Bit Score: 75.67  E-value: 9.93e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKrylraQRPPEGMSPELPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14008     85 LEYCEGGPVM-----ELDSGDRVPPLPEETAR---KYFRDLVLGLEYLHENGIVHRDIKPENLLLTADGTVKISDFGVSE 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYL-----TPERLwvplrwaAPELLGELHGSFvlvdQSRESNVWSLGVTLWELFeFGAQPYrhLSDEEVLAF-V 154
Cdd:cd14008    157 MFEDGNDTLqktagTPAFL-------APELCDGDSKTY----SGKAADIWALGVTLYCLV-FGRLPF--NGDNILELYeA 222
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  155 VRQQHVKLARPRlklPYADYWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd14008    223 IQNQNDEFPIPP---ELSPELKDLLRRMLEKdPEKRITLKEIK 262
STKc_ULK3 cd14121
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the ...
1-191 1.25e-14

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK3 mRNA is up-regulated in fibroblasts after Ras-induced senescence, and its overexpression induces both autophagy and senescence in a fibroblast cell line. ULK3, through its kinase activity, positively regulates Gli proteins, mediators of the Sonic hedgehog (Shh) signaling pathway that is implicated in tissue homeostasis maintenance and neurogenesis. It is inhibited by binding to Suppressor of Fused (Sufu). The ULK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271023 [Multi-domain]  Cd Length: 252  Bit Score: 75.02  E-value: 1.25e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTS--DLTVRIGDYGL 78
Cdd:cd14121     74 MEYCSGGDLSRFIRSRR----TLPE------STVRRFLQQLASALQFLREHNISHMDLKPQNLLLSSryNPVLKLADFGF 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHsnykedyYLTPERLWVPLR----WAAPEllgelhgsfVLVDQSRESNV--WSLGVTLWELFeFGAQPYRHLSDEEVLA 152
Cdd:cd14121    144 AQ-------HLKPNDEAHSLRgsplYMAPE---------MILKKKYDARVdlWSVGVILYECL-FGRAPFASRSFEELEE 206
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  153 FVVRQQHVKL-ARPRLKLPYADYWYDILQscwRPPAQRPS 191
Cdd:cd14121    207 KIRSSKPIEIpTRPELSADCRDLLLRLLQ---RDPDRRIS 243
STKc_AGC cd05123
Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
1-144 1.47e-14

Catalytic domain of AGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. The AGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase.


Pssm-ID: 270693 [Multi-domain]  Cd Length: 250  Bit Score: 74.86  E-value: 1.47e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP-PEGMSpelpprdlrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd05123     72 LDYVPGGELFSHLSKEGRfPEERA-----------RFYAAEIVLALEYLHSLGIIYRDLKPENILLDSDGHIKLTDFGLA 140
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   80 HSNYKEDYYL-----TPERLwvplrwaAPE-LLGELHGsfvlvdqsRESNVWSLGVTLWELFeFGAQPYRH 144
Cdd:cd05123    141 KELSSDGDRTytfcgTPEYL-------APEvLLGKGYG--------KAVDWWSLGVLLYEML-TGKPPFYA 195
PTKc_Src cd05071
Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the ...
2-196 2.46e-14

Catalytic domain of the Protein Tyrosine Kinase, Src; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) PTK, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. The Src subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270656 [Multi-domain]  Cd Length: 277  Bit Score: 74.72  E-value: 2.46e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRppeGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05071     83 EYMSKGSLLDFLKGEM---GKYLRLP-----QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPEllGELHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvk 161
Cdd:cd05071    155 -IEDNEYTARQGAKFPIKWTAPE--AALYGRFTI-----KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--- 223
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1720423198  162 larpRLKLPY--ADYWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd05071    224 ----RMPCPPecPESLHDLMCQCWRKePEERPTFEYLQ 257
STKc_HAL4_like cd13994
Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs ...
1-195 2.49e-14

Catalytic domain of Fungal Halotolerance protein 4-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of HAL4, Saccharomyces cerevisiae Ptk2/Stk2, and similar fungal proteins. Proteins in this subfamily are involved in regulating ion transporters. In budding and fission yeast, HAL4 promotes potassium ion uptake, which increases cellular resistance to other cations such as sodium, lithium, and calcium ions. HAL4 stabilizes the major high-affinity K+ transporter Trk1 at the plasma membrane under low K+ conditions, which prevents endocytosis and vacuolar degradation. Budding yeast Ptk2 phosphorylates and regulates the plasma membrane H+ ATPase, Pma1. The HAL4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270896 [Multi-domain]  Cd Length: 265  Bit Score: 74.65  E-value: 2.49e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAqrppeGMSPELPPRDLRTLQrmgleIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAh 80
Cdd:cd13994     77 MEYCPGGDLFTLIEK-----ADSLSLEEKDCFFKQ-----ILRGVAYLHSHGIAHRDLKPENILLDEDGVLKLTDFGTA- 145
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snykEDYYLTPERLwVPLR--------WAAPELLGELHGSFVLVDqsresnVWSLGVTLWELFeFGAQPYRH--LSDEEV 150
Cdd:cd13994    146 ----EVFGMPAEKE-SPMSaglcgsepYMAPEVFTSGSYDGRAVD------VWSCGIVLFALF-TGRFPWRSakKSDSAY 213
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  151 LAFVV--RQQHVKLARPRLKLPyadywYDILQSCWR---P-PAQRPSASDL 195
Cdd:cd13994    214 KAYEKsgDFTNGPYEPIENLLP-----SECRRLIYRmlhPdPEKRITIDEA 259
PTKc_Yes cd05069
Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the ...
2-196 2.51e-14

Catalytic domain of the Protein Tyrosine Kinase, Yes; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Yes subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270654 [Multi-domain]  Cd Length: 279  Bit Score: 74.72  E-value: 2.51e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05069     86 EFMGKGSLLDFLKEG---DGKYLKLP-----QLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARL 157
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPEllGELHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQhvk 161
Cdd:cd05069    158 -IEDNEYTARQGAKFPIKWTAPE--AALYGRFTI-----KSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY--- 226
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1720423198  162 larpRLKLPYA--DYWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd05069    227 ----RMPCPQGcpESLHELMKLCWKKdPDERPTFEYIQ 260
PTKc_Fyn cd05070
Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the ...
2-196 2.54e-14

Catalytic domain of the Protein Tyrosine Kinase, Fyn; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The Fyn/Yrk subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase.


Pssm-ID: 270655 [Multi-domain]  Cd Length: 274  Bit Score: 74.72  E-value: 2.54e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppEGMSPELPprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd05070     83 EYMSKGSLLDFLKDG---EGRALKLP-----NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nYKEDYYLTPERLWVPLRWAAPEllGELHGSFVLvdqsrESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHVK 161
Cdd:cd05070    155 -IEDNEYTARQGAKFPIKWTAPE--AALYGRFTI-----KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 226
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  162 LARprlKLPYAdyWYDILQSCWRP-PAQRPSASDLQ 196
Cdd:cd05070    227 CPQ---DCPIS--LHELMIHCWKKdPEERPTFEYLQ 257
STKc_MAP3K12_13 cd14059
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase ...
1-191 4.06e-14

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K12 is also called MAPK upstream kinase (MUK), dual leucine zipper-bearing kinase (DLK) or leucine-zipper protein kinase (ZPK). It is involved in the c-Jun N-terminal kinase (JNK) pathway that directly regulates axonal regulation through the phosphorylation of microtubule-associated protein 1B (MAP1B). It also regulates the differentiation of many cell types including adipocytes and may play a role in adipogenesis. MAP3K13, also called leucine zipper-bearing kinase (LZK), directly phosphorylates and activates MKK7, which in turn activates the JNK pathway. It also activates NF-kB through IKK activation and this activity is enhanced by antioxidant protein-1 (AOP-1). MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAP2Ks (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K12/13 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270961 [Multi-domain]  Cd Length: 237  Bit Score: 73.30  E-value: 4.06e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--- 77
Cdd:cd14059     60 MEYCPYGQLYEVLRAGRE---ITPSL-------LVDWSKQIASGMNYLHLHKIIHRDLKSPNVLVTYNDVLKISDFGtsk 129
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 -LAHSNYKEDYYLTperlwvpLRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEfGAQPYRHLsDEEVLAFV 154
Cdd:cd14059    130 eLSEKSTKMSFAGT-------VAWMAPE---------VIRNEpcSEKVDIWSFGVVLWELLT-GEIPYKDV-DSSAIIWG 191
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  155 VRQQHVKLARPR-----LKLpyadywydILQSCWR-PPAQRPS 191
Cdd:cd14059    192 VGSNSLQLPVPStcpdgFKL--------LMKQCWNsKPRNRPS 226
STKc_MLK cd14061
Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the ...
1-200 4.43e-14

Catalytic domain of the Serine/Threonine Kinases, Mixed Lineage Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270963 [Multi-domain]  Cd Length: 258  Bit Score: 73.58  E-value: 4.43e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspeLPPRdlrTLQRMGLEIARGLAHLHSHNYV---HSDLALRNCLL--------TSDL 69
Cdd:cd14061     72 MEYARGGALNRVLAGRK--------IPPH---VLVDWAIQIARGMNYLHNEAPVpiiHRDLKSSNILIleaienedLENK 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 TVRIGDYGLAhsnyKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLsdeE 149
Cdd:cd14061    141 TLKITDFGLA----REWHKTTRMSAAGTYAWMAPEVIKS--STF-----SKASDVWSYGVLLWELLT-GEVPYKGI---D 205
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  150 VLAFVVRqqhvkLARPRLKLPYADY----WYDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd14061    206 GLAVAYG-----VAVNKLTLPIPSTcpepFAQLMKDCWQPdPHDRPSFADILKQLE 256
STKc_MLK4 cd14146
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the ...
1-200 6.25e-14

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK4 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The specific function of MLK4 is yet to be determined. Mutations in the kinase domain of MLK4 have been detected in colorectal cancers. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271048 [Multi-domain]  Cd Length: 268  Bit Score: 73.53  E-value: 6.25e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSP--ELPPRdlrTLQRMGLEIARGLAHLHSHNYV---HSDLALRNCLLTSDL------ 69
Cdd:cd14146     72 MEFARGGTLNRALAAANAAPGPRRarRIPPH---ILVNWAVQIARGMLYLHEEAVVpilHRDLKSSNILLLEKIehddic 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 --TVRIGDYGLAhsnyKEDYYLTPERLWVPLRWAAPELLgelHGSFVlvdqSRESNVWSLGVTLWELFEfGAQPYRHLsD 147
Cdd:cd14146    149 nkTLKITDFGLA----REWHRTTKMSAAGTYAWMAPEVI---KSSLF----SKGSDIWSYGVLLWELLT-GEVPYRGI-D 215
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  148 EEVLAFVVRQQHVKLARPRL-KLPYAdywyDILQSCW-RPPAQRPSASDLQLQLT 200
Cdd:cd14146    216 GLAVAYGVAVNKLTLPIPSTcPEPFA----KLMKECWeQDPHIRPSFALILEQLT 266
STKc_MLK1 cd14145
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the ...
1-200 6.42e-14

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK1 is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK) and is also called MAP3K9. MAP3Ks phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Little is known about the specific function of MLK1. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. There could be redundancy in the function of MLKs. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. The MLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271047 [Multi-domain]  Cd Length: 270  Bit Score: 73.54  E-value: 6.42e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspeLPPRdlrTLQRMGLEIARGLAHLHSHNYV---HSDLALRNCLLT--------SDL 69
Cdd:cd14145     84 MEFARGGPLNRVLSGKR--------IPPD---ILVNWAVQIARGMNYLHCEAIVpviHRDLKSSNILILekvengdlSNK 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 TVRIGDYGLAhsnyKEDYYLTPERLWVPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLsDEE 149
Cdd:cd14145    153 ILKITDFGLA----REWHRTTKMSAAGTYAWMAPEVIRS--SMF-----SKGSDVWSYGVLLWELLT-GEVPFRGI-DGL 219
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  150 VLAFVVRQQHVKLARPRL-KLPYAdywyDILQSCWRP-PAQRPSASDLQLQLT 200
Cdd:cd14145    220 AVAYGVAMNKLSLPIPSTcPEPFA----RLMEDCWNPdPHSRPPFTNILDQLT 268
STKc_Nek cd08215
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; ...
1-195 6.47e-14

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270855 [Multi-domain]  Cd Length: 258  Bit Score: 73.27  E-value: 6.47e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd08215     78 MEYADGGDLAQKIKKQKKKGQPFPE------EQILDWFVQICLALKYLHSRKILHRDLKTQNIFLTKDGVVKLGDFGISK 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 S-NYKED---------YYLTPErLWvplrwaapellgelhgsfvlvdQSRE----SNVWSLGVTLWELFEFgaqpyRHLS 146
Cdd:cd08215    152 VlESTTDlaktvvgtpYYLSPE-LC----------------------ENKPynykSDIWALGCVLYELCTL-----KHPF 203
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198  147 DEEVLAFVVrQQHVKLARPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd08215    204 EANNLPALV-YKIVKGQYPPIPSQYSSELRDLVNSMLQKdPEKRPSANEI 252
STKc_Mos cd13979
Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze ...
1-202 6.54e-14

Catalytic domain of the Serine/Threonine kinase, Oocyte maturation factor Mos; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mos (or c-Mos) is a germ-cell specific kinase that plays roles in both the release of primary arrest and the induction of secondary arrest in oocytes. It is expressed towards the end of meiosis I and is quickly degraded upon fertilization. It is a component of the cytostatic factor (CSF), which is responsible for metaphase II arrest. In addition, Mos activates a phoshorylation cascade that leads to the activation of the p34 subunit of MPF (mitosis-promoting factor or maturation promoting factor), a cyclin-dependent kinase that is responsible for the release of primary arrest in meiosis I. The Mos subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270881 [Multi-domain]  Cd Length: 265  Bit Score: 73.19  E-value: 6.54e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraqrppEGMSPELPprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--- 77
Cdd:cd13979     81 MEYCGNGTLQQLI------YEGSEPLP---LAHRILISLDIARALRFCHSHGIVHLDVKPANILISEQGVCKLCDFGcsv 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 -LAHSNYKE--DYYL--TPerlwvplRWAAPELL-GElhgsfvlvDQSRESNVWSLGVTLWELFeFGAQPYRHLSdEEVL 151
Cdd:cd13979    152 kLGEGNEVGtpRSHIggTY-------TYRAPELLkGE--------RVTPKADIYSFGITLWQML-TRELPYAGLR-QHVL 214
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  152 AFVVRQQHvklaRPRLKLPYADY---WYD-ILQSCWRP-PAQRPSAsDLQLQLTYL 202
Cdd:cd13979    215 YAVVAKDL----RPDLSGLEDSEfgqRLRsLISRCWSAqPAERPNA-DESLLKSLE 265
PKc_Wee1_like cd13997
Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the ...
1-195 2.33e-13

Catalytic domain of the Wee1-like Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity kinase Myt1, the protein tyrosine kinase Wee1, and similar proteins. These proteins are cell cycle checkpoint kinases that are involved in the regulation of cyclin-dependent kinase CDK1, the master engine for mitosis. CDK1 is kept inactivated through phosphorylation of N-terminal thr (T14 by Myt1) and tyr (Y15 by Myt1 and Wee1) residues. Mitosis progression is ensured through activation of CDK1 by dephoshorylation and inactivation of Myt1/Wee1. The Wee1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270899 [Multi-domain]  Cd Length: 252  Bit Score: 71.26  E-value: 2.33e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAh 80
Cdd:cd13997     79 MELCENGSLQDALEEL-SPISKLSE------AEVWDLLLQVALGLAFIHSKGIVHLDIKPDNIFISNKGTCKIGDFGLA- 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snykedyYLTPERLWVP---LRWAAPELLGELHgsfvlvDQSRESNVWSLGVTLWEL-----FEFGAQPYRHLsdeevla 152
Cdd:cd13997    151 -------TRLETSGDVEegdSRYLAPELLNENY------THLPKADIFSLGVTVYEAatgepLPRNGQQWQQL------- 210
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  153 fvvRQQhvKLARPrLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd13997    211 ---RQG--KLPLP-PGLVLSQELTRLLKVMLDPdPTRRPTADQL 248
STKc_CNK2-like cd08530
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar ...
1-195 2.74e-13

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii CNK2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. This subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270869 [Multi-domain]  Cd Length: 256  Bit Score: 71.27  E-value: 2.74e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--- 77
Cdd:cd08530     78 MEYAPFGDLSKLISKRKKKRRLFPE------DDIWRIFIQMLRGLKALHDQKILHRDLKSANILLSAGDLVKIGDLGisk 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAHSNYKEDYYLTPerlwvplRWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWELFEFgAQPYRHLSDEEVLAFVV 155
Cdd:cd08530    152 VLKKNLAKTQIGTP-------LYAAPE---------VWKGRpyDYKSDIWSLGCLLYEMATF-RPPFEARTMQELRYKVC 214
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  156 RQQHvklarPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd08530    215 RGKF-----PPIPPVYSQDLQQIIRSLLQVnPKKRPSCDKL 250
STKc_CDK4_6_like cd07838
Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; ...
8-135 3.23e-13

Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270831 [Multi-domain]  Cd Length: 287  Bit Score: 71.54  E-value: 3.23e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRaQRPPEGMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnYKEDY 87
Cdd:cd07838     91 DLATYLD-KCPKPGLPPE-------TIKDLMRQLLRGLDFLHSHRIVHRDLKPQNILVTSDGQVKLADFGLARI-YSFEM 161
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198   88 YLTPerLWVPLRWAAPE-LLGELHGSFVlvdqsresNVWSLGVTLWELF 135
Cdd:cd07838    162 ALTS--VVVTLWYRAPEvLLQSSYATPV--------DMWSVGCIFAELF 200
STKc_CDK_like cd07829
Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs ...
1-134 3.58e-13

Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270823 [Multi-domain]  Cd Length: 282  Bit Score: 71.36  E-value: 3.58e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLgDLKRYLRAQRPPegmspeLPPRDLRTLQRMGLeiaRGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07829     77 FEYCDQ-DLKKYLDKRPGP------LPPNLIKSIMYQLL---RGLAYCHSHRILHRDLKPQNLLINRDGVLKLADFGLAR 146
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198   81 S-NYKEDYYlTPE--RLWvplrWAAPE-LLGELHGSFVlVDqsresnVWSLGVTLWEL 134
Cdd:cd07829    147 AfGIPLRTY-THEvvTLW----YRAPEiLLGSKHYSTA-VD------IWSVGCIFAEL 192
STKc_SLK_like cd06611
Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the ...
40-195 4.18e-13

Catalytic domain of Ste20-Like Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the subfamily include SLK, STK10 (also called LOK for Lymphocyte-Oriented Kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132942 [Multi-domain]  Cd Length: 280  Bit Score: 71.31  E-value: 4.18e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPerlwvplRWAAPELlgelhgsfV 114
Cdd:cd06611    111 QMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLqkrdtFIGTP-------YWMAPEV--------V 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 LVDQSRE------SNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLklpYADYWYDILQSCW-RPPA 187
Cdd:cd06611    176 ACETFKDnpydykADIWSLGITLIELAQ-MEPPHHELNPMRVLLKILKSEPPTLDQPSK---WSSSFNDFLKSCLvKDPD 251

                   ....*...
gi 1720423198  188 QRPSASDL 195
Cdd:cd06611    252 DRPTAAEL 259
STKc_BMPR2_AMHR2 cd14054
Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and ...
1-183 4.40e-13

Catalytic domain of the Serine/Threonine Kinases, Bone Morphogenetic Protein and Anti-Muellerian Hormone Type II Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR2 and AMHR2 belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors (GDFs), and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. BMPR2 and AMHR2 act primarily as a receptor for BMPs and AMH, respectively. BMPs induce bone and cartilage formation, as well as regulate tooth, kidney, skin, hair, haematopoietic, and neuronal development. Mutations in BMPR2A is associated with familial pulmonary arterial hypertension. AMH is mainly responsible for the regression of Mullerian ducts during male sex differentiation. It is expressed exclusively by somatic cells of the gonads. Mutations in either AMH or AMHR2 cause persistent Mullerian duct syndrome (PMDS), a rare form of male pseudohermaphroditism characterized by the presence of Mullerian derivatives (ovary and tubes) in otherwise normally masculine males. The BMPR2/AMHR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270956 [Multi-domain]  Cd Length: 300  Bit Score: 71.24  E-value: 4.40e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspelppRDLRTLQRMGLEIARGLAHLHSH---------NYVHSDLALRNCLLTSDLTV 71
Cdd:cd14054     73 LEYAPKGSLCSYLRENT-----------LDWMSSCRMALSLTRGLAYLHTDlrrgdqykpAIAHRDLNSRNVLVKADGSC 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLA---HSNYKEDYYLTPERLWVP-----LRWAAPELlgeLHGSFVLVDQS---RESNVWSLGVTLWELF----- 135
Cdd:cd14054    142 VICDFGLAmvlRGSSLVRGRPGAAENASIsevgtLRYMAPEV---LEGAVNLRDCEsalKQVDVYALGLVLWEIAmrcsd 218
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  136 ----------------EFGAQPyrhlSDEEVLAFVVRQQhvklARPrlKLPyaDYW----------YDILQSCW 183
Cdd:cd14054    219 lypgesvppyqmpyeaELGNHP----TFEDMQLLVSREK----ARP--KFP--DAWkenslavrslKETIEDCW 280
PK_GC cd13992
Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows ...
41-194 4.60e-13

Pseudokinase domain of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270894 [Multi-domain]  Cd Length: 268  Bit Score: 70.88  E-value: 4.60e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLH-SHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----HSNYKEDYYLTPERLWvplrWAAPELlgeLHGSFV 114
Cdd:cd13992    106 IVKGMNYLHsSSIGYHGRLKSSNCLVDSRWVVKLTDFGLRnlleeQTNHQLDEDAQHKKLL----WTAPEL---LRGSLL 178
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 LVDQSRESNVWSLGVTLWELFeFGAQPYrHLSDEEVLAFVVRQQHVKLARPRLKLPYA----DYwYDILQSCW-RPPAQR 189
Cdd:cd13992    179 EVRGTQKGDVYSFAIILYEIL-FRSDPF-ALEREVAIVEKVISGGNKPFRPELAVLLDefppRL-VLLVKQCWaENPEKR 255

                   ....*
gi 1720423198  190 PSASD 194
Cdd:cd13992    256 PSFKQ 260
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
1-195 7.41e-13

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 70.13  E-value: 7.41e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspelpprdlRTLQRMG-----LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd08529     78 MEYAENGDLHSLIKSQRG-------------RPLPEDQiwkffIQTLLGLSHLHSKKILHRDIKSMNIFLDKGDNVKIGD 144
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLA-----HSNYKEDYYLTPERLwvplrwaAPELLGElhgsfvlVDQSRESNVWSLGVTLWELFEFgaqpyRHLSDEEV 150
Cdd:cd08529    145 LGVAkilsdTTNFAQTIVGTPYYL-------SPELCED-------KPYNEKSDVWALGCVLYELCTG-----KHPFEAQN 205
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  151 LAFVVRqqhvKLAR---PRLKLPYADYWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd08529    206 QGALIL----KIVRgkyPPISASYSQDLSQLIDSCLtKDYRQRPDTTEL 250
STKc_myosinIII_N_like cd06608
N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze ...
1-195 9.77e-13

N-terminal Catalytic domain of Class III myosin-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), and mitogen-activated protein kinase (MAPK) kinase kinase kinase 4/6. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270785 [Multi-domain]  Cd Length: 275  Bit Score: 70.02  E-value: 9.77e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLG---DLKRYLRaqRPPEGMSPELPPRDLRtlqrmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:cd06608     88 MEYCGGGsvtDLVKGLR--KKGKRLKEEWIAYILR-------ETLRGLAYLHENKVIHRDIKGQNILLTEEAEVKLVDFG 158
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ----LAHSNYKEDYYL-TPerlwvplRWAAPELlgelhgsfVLVDQSRE------SNVWSLGVTLWELFEfGAQPYRHLS 146
Cdd:cd06608    159 vsaqLDSTLGRRNTFIgTP-------YWMAPEV--------IACDQQPDasydarCDVWSLGITAIELAD-GKPPLCDMH 222
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198  147 DEEVLAFVVRQQHVKLARPRLklpYADYWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd06608    223 PMRALFKIPRNPPPTLKSPEK---WSKEFNDFISECLiKNYEQRPFTEEL 269
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
40-195 1.10e-12

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 69.69  E-value: 1.10e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYK---------EDYYLTPerlwvplRWAAPELLGELH 110
Cdd:cd06610    110 EVLKGLEYLHSNGQIHRDVKAGNILLGEDGSVKIADFGVSASLATggdrtrkvrKTFVGTP-------CWMAPEVMEQVR 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  111 GSFVLVDqsresnVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLPYADYWYDILQSCW-RPPAQR 189
Cdd:cd06610    183 GYDFKAD------IWSFGITAIELAT-GAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLqKDPSKR 255

                   ....*.
gi 1720423198  190 PSASDL 195
Cdd:cd06610    256 PTAEEL 261
STKc_Pat1_like cd13993
Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of ...
1-197 1.33e-12

Catalytic domain of Fungal Pat1-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Pat1 (also called Ran1), Saccharomyces cerevisiae VHS1 and KSP1, and similar fungal STKs. Pat1 blocks Mei2, an RNA-binding protein which is indispensable in the initiation of meiosis. Pat1 is inactivated and Mei2 activated, which initiates meiosis, under nutrient-deprived conditions through a signaling cascade involving Ste11. Meiosis induced by Pat1 inactivation may show different characteristics than normal meiosis including aberrant positioning of centromeres. VHS1 was identified in a screen for suppressors of cell cycle arrest at the G1/S transition, while KSP1 may be involved in regulating PRP20, which is required for mRNA export and maintenance of nuclear structure. The Pat1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270895 [Multi-domain]  Cd Length: 267  Bit Score: 69.30  E-value: 1.33e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGmSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT-SDLTVRIGDYGLA 79
Cdd:cd13993     84 LEYCPNGDLFEAITENRIYVG-KTEL-------IKNVFLQLIDAVKHCHSLGIYHRDIKPENILLSqDEGTVKLCDFGLA 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 -HSNYKEDYYLTPErlwvplRWAAPELLGELHGSFVLVDqSRESNVWSLGVTLWELFeFGAQPYR--HLSDEEVLAFVVR 156
Cdd:cd13993    156 tTEKISMDFGVGSE------FYMAPECFDEVGRSLKGYP-CAAGDIWSLGIILLNLT-FGRNPWKiaSESDPIFYDYYLN 227
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  157 QQHVKlarpRLKLPYADYWYDILQSCWRP-PAQRPSASDLQL 197
Cdd:cd13993    228 SPNLF----DVILPMSDDFYNLLRQIFTVnPNNRILLPELQL 265
PTKc_HER4 cd05110
Catalytic domain of the Protein Tyrosine Kinase, HER4; PTKs catalyze the transfer of the ...
39-202 1.45e-12

Catalytic domain of the Protein Tyrosine Kinase, HER4; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 (ErbB4) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor PTKs (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other PTKs, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. The HER4 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173655 [Multi-domain]  Cd Length: 303  Bit Score: 70.10  E-value: 1.45e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLGelHGSFvlvdq 118
Cdd:cd05110    116 VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH--YRKF----- 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  119 SRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFVVRQQHVklarPRLKLPYADYwYDILQSCWRPPA-QRPSASDLQL 197
Cdd:cd05110    189 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL----PQPPICTIDV-YMVMVKCWMIDAdSRPKFKELAA 263

                   ....*
gi 1720423198  198 QLTYL 202
Cdd:cd05110    264 EFSRM 268
STKc_MAPK cd07834
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs ...
41-194 1.84e-12

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270828 [Multi-domain]  Cd Length: 329  Bit Score: 69.86  E-value: 1.84e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS--NYKEDYYLTPerlWVPLRW-AAPELLGELHGSFVLVD 117
Cdd:cd07834    112 ILRGLKYLHSAGVIHRDLKPSNILVNSNCDLKICDFGLARGvdPDEDKGFLTE---YVVTRWyRAPELLLSSKKYTKAID 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  118 qsresnVWSLGVTLWELFE----FGAQPYRH-------------------LSDEEVLAFVVRQQHVKLARPRLKLPYAD- 173
Cdd:cd07834    189 ------IWSVGCIFAELLTrkplFPGRDYIDqlnlivevlgtpseedlkfISSEKARNYLKSLPKKPKKPLSEVFPGASp 262
                          170       180
                   ....*....|....*....|..
gi 1720423198  174 YWYDILQSCWR-PPAQRPSASD 194
Cdd:cd07834    263 EAIDLLEKMLVfNPKKRITADE 284
STKc_MLK3 cd14147
Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the ...
1-202 3.00e-12

Catalytic domain of the Serine/Threonine Kinase, Mixed Lineage Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLK3 is a mitogen-activated protein kinase kinase kinases (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLK3 activates multiple MAPK pathways and plays a role in apoptosis, proliferation, migration, and differentiation, depending on the cellular context. It is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. MLK3 also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and consequently, it also impacts inflammation and immunity. Mammals have four MLKs, mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation.The MLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271049 [Multi-domain]  Cd Length: 267  Bit Score: 68.52  E-value: 3.00e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspeLPPRdlrTLQRMGLEIARGLAHLHSHNYV---HSDLALRNCLLT--------SDL 69
Cdd:cd14147     81 MEYAAGGPLSRALAGRR--------VPPH---VLVNWAVQIARGMHYLHCEALVpviHRDLKSNNILLLqpienddmEHK 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   70 TVRIGDYGLAHSNYKEDYYLTPErlwvPLRWAAPELLGElhGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLsDEE 149
Cdd:cd14147    150 TLKITDFGLAREWHKTTQMSAAG----TYAWMAPEVIKA--STF-----SKGSDVWSFGVLLWELLT-GEVPYRGI-DCL 216
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  150 VLAFVVRQQHVKLARPRL-KLPYAdywyDILQSCW-RPPAQRPSASDLQLQLTYL 202
Cdd:cd14147    217 AVAYGVAVNKLTLPIPSTcPEPFA----QLMADCWaQDPHRRPDFASILQQLEAL 267
STKc_RIP1 cd14027
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze ...
1-194 3.80e-12

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP1 harbors a C-terminal Death domain (DD), which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 can also recruit other kinases including MEKK1, MEKK3, and RIP3 through an intermediate domain (ID) that bears a RIP homotypic interaction motif (RHIM). RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accummulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. RIP kinases serve as essential sensors of cellular stress. The RIP1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270929 [Multi-domain]  Cd Length: 267  Bit Score: 67.91  E-value: 3.80e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspelpprdLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd14027     70 MEYMEKGNLMHVLKKVSVP-----------LSVKGRIILEIIEGMAYLHGKGVIHKDLKPENILVDNDFHIKIADLGLAs 138
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 ----------HSNYKEDYYLTPERLWVPLRWAAPELLGELHgsfvlVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEE 149
Cdd:cd14027    139 fkmwskltkeEHNEQREVDGTAKKNAGTLYYMAPEHLNDVN-----AKPTEKSDVYSFAIVLWAIFA-NKEPYENAINED 212
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  150 VLAFVVRQQHvklaRPRLKL--PYA-DYWYDILQSCW-RPPAQRPSASD 194
Cdd:cd14027    213 QIIMCIKSGN----RPDVDDitEYCpREIIDLMKLCWeANPEARPTFPG 257
STKc_Raf cd14062
Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) ...
30-173 4.95e-12

Catalytic domain of the Serine/Threonine Kinases, Raf (Rapidly Accelerated Fibrosarcoma) kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Raf kinases act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. Aberrant expression or activation of components in this pathway are associated with tumor initiation, progression, and metastasis. Raf proteins contain a Ras binding domain, a zinc finger cysteine-rich domain, and a catalytic kinase domain. Vertebrates have three Raf isoforms (A-, B-, and C-Raf) with different expression profiles, modes of regulation, and abilities to function in the ERK cascade, depending on cellular context and stimuli. They have essential and non-overlapping roles during embryo- and organogenesis. Knockout of each isoform results in a lethal phenotype or abnormality in most mouse strains. The Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270964 [Multi-domain]  Cd Length: 253  Bit Score: 67.42  E-value: 4.95e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHsnykedyyltperlwVPLRWAAPELLGEL 109
Cdd:cd14062     87 EMLQLIDIARQTAQGMDYLHAKNIIHRDLKSNNIFLHEDLTVKIGDFGLAT---------------VKTRWSGSQQFEQP 151
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  110 HGSF------VLVDQ-----SRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQqhvKLARPRLKLPYAD 173
Cdd:cd14062    152 TGSIlwmapeVIRMQdenpySFQSDVYAFGIVLYELLT-GQLPYSHINNRDQILFMVGR---GYLRPDLSKVRSD 222
STKc_TSSK-like cd14080
Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs ...
1-131 9.72e-12

Catalytic domain of testis-specific serine/threonine kinases and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. TSSK6, also called SSTK, is expressed at the head of elongated sperm. TSSK1/TSSK2 double knock-out and TSSK6 null mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270982 [Multi-domain]  Cd Length: 262  Bit Score: 66.82  E-value: 9.72e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14080     81 MEYAEHGDLLEYIQKRGA-------LSESQAR---IWFRQLALAVQYLHSLDIAHRDLKCENILLDSNNNVKLSDFGFAR 150
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWAAPELL-GELHgsfvlvdQSRESNVWSLGVTL 131
Cdd:cd14080    151 LCPDDDGDVLSKTFCGSAAYAAPEILqGIPY-------DPKKYDIWSLGVIL 195
STKc_PAK cd06614
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the ...
40-195 1.26e-11

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270789 [Multi-domain]  Cd Length: 255  Bit Score: 66.08  E-value: 1.26e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPERlwvPLR--------WAAPEL-LGELH 110
Cdd:cd06614    105 EVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ-------LTKEK---SKRnsvvgtpyWMAPEViKRKDY 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  111 GsfVLVDqsresnVWSLGVTLWELFEfGAQPYRHLSDEEVLaFVVRQQHVklarPRLKlpYADYW----YDILQSCWRP- 185
Cdd:cd06614    175 G--PKVD------IWSLGIMCIEMAE-GEPPYLEEPPLRAL-FLITTKGI----PPLK--NPEKWspefKDFLNKCLVKd 238
                          170
                   ....*....|
gi 1720423198  186 PAQRPSASDL 195
Cdd:cd06614    239 PEKRPSAEEL 248
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
40-195 2.22e-11

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 65.71  E-value: 2.22e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDYYLTPERLWVPLrWAAPELLgELHGSfvlvdqS 119
Cdd:cd06627    107 QVLEGLAYLHEQGVIHRDIKGANILTTKDGLVKLADFGVA-TKLNEVEKDENSVVGTPY-WMAPEVI-EMSGV------T 177
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198  120 RESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHvklarPRLKLPYADYWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd06627    178 TASDIWSVGCTVIELLT-GNPPYYDLQPMAALFRIVQDDH-----PPLPENISPELRDFLLQCFqKDPTLRPSAKEL 248
STKc_TGFbR-like cd13998
Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; ...
1-193 2.35e-11

Catalytic domain of Transforming Growth Factor beta Receptor-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. There are two types of TGFbeta receptors included in this subfamily, I and II, that play different roles in signaling. For signaling to occur, the ligand first binds to the high-affinity type II receptor, which is followed by the recruitment of the low-affinity type I receptor to the complex and its activation through trans-phosphorylation by the type II receptor. The active type I receptor kinase starts intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. Different ligands interact with various combinations of types I and II receptors to elicit a specific signaling pathway. Activins primarily signal through combinations of ACVR1b/ALK7 and ACVR2a/b; myostatin and GDF11 through TGFbR1/ALK4 and ACVR2a/b; BMPs through ACVR1/ALK1 and BMPR2; and TGFbeta through TGFbR1 and TGFbR2. The TGFbR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270900 [Multi-domain]  Cd Length: 289  Bit Score: 65.92  E-value: 2.35e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppegmspeLPPRDLRTLQRMGLEIARGLAHLHSH---------NYVHSDLALRNCLLTSDLTV 71
Cdd:cd13998     72 TAFHPNGSL*DYLS-----------LHTIDWVSLCRLALSVARGLAHLHSEipgctqgkpAIAHRDLKSKNILVKNDGTC 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLA----HSNYKEDYYLTPErlwV-PLRWAAPELLgELHGSFVLVDQSRESNVWSLGVTLWELFE---------- 136
Cdd:cd13998    141 CIADFGLAvrlsPSTGEEDNANNGQ---VgTKRYMAPEVL-EGAINLRDFESFKRVDIYAMGLVLWEMASrctdlfgive 216
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720423198  137 -----FGAQPYRHLSDEEVLAFVVRQQhvklARPRLKlpyaDYWYD---------ILQSCW-RPPAQRPSAS 193
Cdd:cd13998    217 eykppFYSEVPNHPSFEDMQEVVVRDK----QRPNIP----NRWLShpglqslaeTIEECWdHDAEARLTAQ 280
STKc_AMPK-like cd14003
Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze ...
1-142 2.57e-11

Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AMPK-like subfamily is composed of AMPK, MARK, BRSK, NUAK, MELK, SNRK, TSSK, and SIK, among others. LKB1 serves as a master upstream kinase that activates AMPK and most AMPK-like kinases. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. BRSKs play important roles in establishing neuronal polarity. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. The AMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270905 [Multi-domain]  Cd Length: 252  Bit Score: 65.23  E-value: 2.57e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14003     78 MEYASGGELFDYIVNNGR-------LSEDEARRFFQ---QLISAVDYCHSNGIVHRDLKLENILLDKNGNLKIIDFGLSN 147
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   81 SNYKEDYYLT----PErlwvplrWAAPELL-GELHgsfvlvdQSRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14003    148 EFRGGSLLKTfcgtPA-------YAAPEVLlGRKY-------DGPKADVWSLGVILYAML-TGYLPF 199
PK_KSR cd14063
Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to ...
1-195 2.70e-11

Pseudokinase domain of Kinase Suppressor of Ras; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases, but there is some debate in this designation as a few groups have reported detecting kinase catalytic activity for KSRs, specifically KSR1. Vertebrates contain two KSR proteins, KSR1 and KSR2. The KSR subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270965 [Multi-domain]  Cd Length: 271  Bit Score: 65.45  E-value: 2.70e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSpelpprdlRTLQrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVrIGDYGLAH 80
Cdd:cd14063     75 TSLCKGRTLYSLIHERKEKFDFN--------KTVQ-IAQQICQGMGYLHAKGIIHKDLKSKNIFLENGRVV-ITDFGLFS 144
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERLWVPLRWA---APELLGELHGSFVLVDQ---SRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAFV 154
Cdd:cd14063    145 LSGLLQPGRREDTLVIPNGWLcylAPEIIRALSPDLDFEESlpfTKASDVYAFGTVWYELL-AGRWPFKEQPAESIIWQV 223
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  155 VRQQhvKLARPRLKLPYAdyWYDILQSCWR-PPAQRPSASDL 195
Cdd:cd14063    224 GCGK--KQSLSQLDIGRE--VKDILMQCWAyDPEKRPTFSDL 261
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
1-191 2.73e-11

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 65.55  E-value: 2.73e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspelPPRDLRTlqRMGLEIARGLAHLHSHN--YVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd13978     71 MEYMENGSLKSLLEREIQD-------VPWSLRF--RIIHEIALGMNFLHNMDppLLHHDLKPENILLDNHFHVKISDFGL 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 A---HSNYKEDYYLTPERLWVPLRWAAPELLGELHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd13978    142 SklgMKSISANRRRGTENLGGTPIYMAPEAFDDFNKKP-----TSKSDVYSFAIVIWAVLT-RKEPFENAINPLLIMQIV 215
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  156 RQQHvklaRPRLKLPYADYWYD-------ILQSCW-RPPAQRPS 191
Cdd:cd13978    216 SKGD----RPSLDDIGRLKQIEnvqelisLMIRCWdGNPDARPT 255
STKc_MLTK cd14060
Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated ...
2-195 3.43e-11

Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLTK, also called zipper sterile-alpha-motif kinase (ZAK), contains a catalytic kinase domain and a leucine zipper. There are two alternatively-spliced variants, MLTK-alpha and MLTK-beta. MLTK-alpha contains a sterile-alpha-motif (SAM) at the C-terminus. MLTK regulates the c-Jun N-terminal kinase, extracellular signal-regulated kinase, p38 MAPK, and NF-kB pathways. ZAK is the MAP3K involved in the signaling cascade that leads to the ribotoxic stress response initiated by cellular damage due to Shiga toxins and ricin. It may also play a role in cell transformation and cancer development. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.The MLTK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270962 [Multi-domain]  Cd Length: 242  Bit Score: 64.59  E-value: 3.43e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRppegmSPELpprDLRTLQRMGLEIARGLAHLHSH---NYVHSDLALRNCLLTSDLTVRIGDYGl 78
Cdd:cd14060     62 EYASYGSLFDYLNSNE-----SEEM---DMDQIMTWATDIAKGMHYLHMEapvKVIHRDLKSRNVVIAADGVLKICDFG- 132
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDYYLTperLWVPLRWAAPELLGELhgsfvlvDQSRESNVWSLGVTLWELFEFGAqPYRHLSDEEVlAFVVRQQ 158
Cdd:cd14060    133 ASRFHSHTTHMS---LVGTFPWMAPEVIQSL-------PVSETCDTYSYGVVLWEMLTREV-PFKGLEGLQV-AWLVVEK 200
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1720423198  159 HvklARPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd14060    201 N---ERPTIPSSCPRSFAELMRRCWEAdVKERPSFKQI 235
Pkinase pfam00069
Protein kinase domain;
1-195 4.35e-11

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 63.80  E-value: 4.35e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRtlqRMGLEIARGLAHlhshnyvhsdlalrncllTSDLTVRIGdyglah 80
Cdd:pfam00069   77 LEYVEGGSLFDLLSEKGA-------FSEREAK---FIMKQILEGLES------------------GSSLTTFVG------ 122
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 snykedyylTPErlwvplrWAAPELLGELHgsfvlvdQSRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAFVVRQqhv 160
Cdd:pfam00069  123 ---------TPW-------YMAPEVLGGNP-------YGPKVDVWSLGCILYELL-TGKPPFPGINGNEIYELIIDQ--- 175
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  161 KLARPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:pfam00069  176 PYAFPELPSNLSEEAKDLLKKLLKKdPSKRLTATQA 211
STKc_NUAK cd14073
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze ...
1-142 4.37e-11

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK1, also called ARK5 (AMPK-related protein kinase 5), regulates cell proliferation and displays tumor suppression through direct interaction and phosphorylation of p53. It is also involved in cell senescence and motility. High NUAK1 expression is associated with invasiveness of nonsmall cell lung cancer (NSCLC) and breast cancer cells. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. The NUAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270975 [Multi-domain]  Cd Length: 254  Bit Score: 64.72  E-value: 4.37e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLah 80
Cdd:cd14073     80 MEYASGGELYDYISERR-------RLPEREARRIFR---QIVSAVHYCHKNGVVHRDLKLENILLDQNGNAKIADFGL-- 147
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198   81 SNYKEDYYLTPERLWVPLrWAAPELLGEL--HGSfvlvdqsrESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14073    148 SNLYSKDKLLQTFCGSPL-YASPEIVNGTpyQGP--------EVDCWSLGVLLYTLV-YGTMPF 201
PKc_Pek1_like cd06621
Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
1-195 4.46e-11

Catalytic domain of fungal Pek1-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates Pmk1/Spm1 and is regulated by the MAPKK kinase Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKK kinase Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270793 [Multi-domain]  Cd Length: 287  Bit Score: 65.14  E-value: 4.46e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--- 77
Cdd:cd06621     80 MEYCEGGSLDSIYKKVKKKGGRIGE------KVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGvsg 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 -----LAHSNYKEDYYLTPERLwvplrwaapellgeLHGSFvlvdqSRESNVWSLGVTLWEL----FEFGAQPYRHLSDE 148
Cdd:cd06621    154 elvnsLAGTFTGTSYYMAPERI--------------QGGPY-----SITSDVWSLGLTLLEVaqnrFPFPPEGEPPLGPI 214
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  149 EVLAFVVRQQHVKLA-RPRLKLPYADYWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd06621    215 ELLSYIVNMPNPELKdEPENGIKWSESFKDFIEKCLeKDGTRRPGPWQM 263
STKc_C-Raf cd14149
Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) ...
40-155 5.42e-11

Catalytic domain of the Serine/Threonine Kinase, C-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. C-Raf, also known as Raf-1 or c-Raf-1, is ubiquitously expressed and was the first Raf identified. It was characterized as the acquired oncogene from an acutely transforming murine sarcoma virus (3611-MSV) and the transforming agent from the avian retrovirus MH2. C-Raf-deficient mice embryos die around midgestation with increased apoptosis of embryonic tissues, especially in the fetal liver. One of the main functions of C-Raf is restricting caspase activation to promote survival in response to specific stimuli such as Fas stimulation, macrophage apoptosis, and erythroid differentiation. C-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The C-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271051 [Multi-domain]  Cd Length: 283  Bit Score: 65.05  E-value: 5.42e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLG-ELHGSFvlvdq 118
Cdd:cd14149    116 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRmQDNNPF----- 190
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1720423198  119 SRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd14149    191 SFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMV 226
STKc_B-Raf cd14151
Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) ...
30-155 5.48e-11

Catalytic domain of the Serine/Threonine Kinase, B-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. B-Raf activates ERK with the strongest magnitude, compared with other Raf kinases. Mice embryos deficient in B-Raf die around midgestation due to vascular hemorrhage caused by apoptotic endothelial cells. Mutations in B-Raf have been implicated in initiating tumorigenesis and tumor progression, and are found in malignant cutaneous melanoma, papillary thyroid cancer, as well as in ovarian and colorectal carcinomas. Most oncogenic B-Raf mutations are located at the activation loop of the kinase and surrounding regions; the V600E mutation accounts for around 90% of oncogenic mutations. The V600E mutant constitutively activates MEK, resulting in sustained activation of ERK. B-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. They function in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The B-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271053 [Multi-domain]  Cd Length: 274  Bit Score: 64.70  E-value: 5.48e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLGel 109
Cdd:cd14151    102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR-- 179
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  110 hgsfvLVDQ---SRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd14151    180 -----MQDKnpySFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
STKc_PLK cd14099
Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the ...
1-195 7.16e-11

Catalytic domain of the Serine/Threonine Kinases, Polo-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. PLKs derive their names from homology to polo, a kinase first identified in Drosophila. There are five mammalian PLKs (PLK1-5) from distinct genes. There is good evidence that PLK1 may function as an oncogene while PLK2-5 have tumor suppressive properties. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. PLK2 functions in G1 progression, S-phase arrest, and centriole duplication. PLK3 regulates angiogenesis and responses to DNA damage. PLK4 is required for late mitotic progression, cell survival, and embryonic development. PLK5 was first identified as a pseudogene containing a stop codon within the kinase domain, however, both murine and human genes encode expressed proteins. PLK5 functions in cell cycle arrest.


Pssm-ID: 271001 [Multi-domain]  Cd Length: 258  Bit Score: 64.11  E-value: 7.16e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP-PEgmsPELpprdlrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14099     80 LELCSNGSLMELLKRRKAlTE---PEV--------RYFMRQILSGVKYLHSNRIIHRDLKLGNLFLDENMNVKIGDFGLA 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 ----HSNYKEdYYL--TPERLwvplrwaAPELLGELHGsfvlvdQSRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLaf 153
Cdd:cd14099    149 arleYDGERK-KTLcgTPNYI-------APEVLEKKKG------HSFEVDIWSLGVILYTLL-VGKPPFETSDVKETY-- 211
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  154 vvrqQHVKLAR---PRlKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd14099    212 ----KRIKKNEysfPS-HLSISDEAKDLIRSMLQPdPTKRPSLDEI 252
STKc_SLK cd06643
Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer ...
1-174 7.63e-11

Catalytic domain of the Serine/Threonine Kinase, Ste20-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270811 [Multi-domain]  Cd Length: 283  Bit Score: 64.28  E-value: 7.63e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKR-YLRAQRPpegmspeLPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd06643     81 IEFCAGGAVDAvMLELERP-------LTEPQIRVVCKQTLE---ALVYLHENKIIHRDLKAGNILFTLDGDIKLADFGVS 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYK-----EDYYLTPerlwvplRWAAPELlgelhgsfVLVDQSRE------SNVWSLGVTLWELFEFgAQPYRHLSDE 148
Cdd:cd06643    151 AKNTRtlqrrDSFIGTP-------YWMAPEV--------VMCETSKDrpydykADVWSLGVTLIEMAQI-EPPHHELNPM 214
                          170       180
                   ....*....|....*....|....*..
gi 1720423198  149 EVLAFVVRQQHVKLARP-RLKLPYADY 174
Cdd:cd06643    215 RVLLKIAKSEPPTLAQPsRWSPEFKDF 241
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
2-195 8.78e-11

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 63.83  E-value: 8.78e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL--- 78
Cdd:cd08224     80 ELADAGDLSRLIKHFKKQKRLIPE------RTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITANGVVKLGDLGLgrf 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 -------AHSNYKEDYYLTPERLwvplrwaapellgelHGS---FvlvdqsrESNVWSLGVTLWELFEFGAQPYRhlsdE 148
Cdd:cd08224    154 fsskttaAHSLVGTPYYMSPERI---------------REQgydF-------KSDIWSLGCLLYEMAALQSPFYG----E 207
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  149 EVLAFVVRQQHVKLARPRL-KLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd08224    208 KMNLYSLCKKIEKCEYPPLpADLYSQELRDLVAACIQPdPEKRPDISYV 256
STKc_EIF2AK1_HRI cd14049
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
1-195 9.89e-11

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Heme-Regulated Inhibitor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HRI (or EIF2AK1) contains an N-terminal regulatory heme-binding domain and a C-terminal catalytic kinase domain. It is suppressed under normal conditions by binding of the heme iron, and is activated during heme deficiency. It functions as a critical regulator that ensures balanced synthesis of globins and heme, in order to form stable hemoglobin during erythroid differentiation and maturation. HRI also protects cells and enhances survival under iron-deficient conditions. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The HRI subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270951 [Multi-domain]  Cd Length: 284  Bit Score: 64.07  E-value: 9.89e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLgDLKRYL--RAQRPPEGMSPELP--PRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT-SDLTVRIGD 75
Cdd:cd14049     86 MQLCEL-SLWDWIveRNKRPCEEEFKSAPytPVDVDVTTKILQQLLEGVTYIHSMGIVHRDLKPRNIFLHgSDIHVRIGD 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAHSN--YKEDYYLTPERLWVPLR--------WAAPEllgELHGSfvlvDQSRESNVWSLGVTLWELFE-FGAQPYRh 144
Cdd:cd14049    165 FGLACPDilQDGNDSTTMSRLNGLTHtsgvgtclYAAPE---QLEGS----HYDFKSDMYSIGVILLELFQpFGTEMER- 236
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  145 lsdEEVLAfVVRQQHVKLARPRLKLPYADYWYDILQscwRPPAQRPSASDL 195
Cdd:cd14049    237 ---AEVLT-QLRNGQIPKSLCKRWPVQAKYIKLLTS---TEPSERPSASQL 280
STKc_A-Raf cd14150
Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) ...
30-155 1.04e-10

Catalytic domain of the Serine/Threonine Kinase, A-Raf (Rapidly Accelerated Fibrosarcoma) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. A-Raf cooperates with C-Raf in regulating ERK transient phosphorylation that is associated with cyclin D expression and cell cycle progression. Mice deficient in A-Raf are born alive but show neurological and intestinal defects. A-Raf demonstrates low kinase activity to MEK, compared with B- and C-Raf, and may also have alternative functions other than in the ERK signaling cascade. It regulates the M2 type pyruvate kinase, a key glycolytic enzyme. It also plays a role in endocytic membrane trafficking. A-Raf is a mitogen-activated protein kinase kinase kinase (MAP3K, MKKK, MAPKKK), which phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. It functions in the linear Ras-Raf-MEK-ERK pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. The A-Raf subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271052 [Multi-domain]  Cd Length: 265  Bit Score: 63.88  E-value: 1.04e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELLGEL 109
Cdd:cd14150     94 DTMQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGSQQVEQPSGSILWMAPEVIRMQ 173
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  110 HGSfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd14150    174 DTN----PYSFQSDVYAYGVVLYELMS-GTLPYSNINNRDQIIFMV 214
PTK_Jak_rpt1 cd05037
Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak ...
1-191 1.11e-10

Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases; The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. They are cytoplasmic (or nonreceptor) PTKs containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. In the case of Jak2, the presumed pseudokinase (repeat 1) domain exhibits dual-specificity kinase activity, phosphorylating two negative regulatory sites in Jak2: Ser523 and Tyr570. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. The Jak subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270633 [Multi-domain]  Cd Length: 259  Bit Score: 63.65  E-value: 1.11e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELpprdlrtlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSD------LTVRIG 74
Cdd:cd05037     80 QEYVRYGPLDKYLRRMGNNVPLSWKL---------QVAKQLASALHYLEDKKLIHGNVRGRNILLAREgldgypPFIKLS 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   75 DYGLAHSnykedyYLTPERLWVPLRWAAPELLGELHGSFvlvdqSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVLAFV 154
Cdd:cd05037    151 DPGVPIT------VLSREERVDRIPWIAPECLRNLQANL-----TIAADKWSFGTTLWEICSGGEEPLSALSSQEKLQFY 219
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1720423198  155 VRQQhvklarpRLKLPYADYWYDILQSCWRP-PAQRPS 191
Cdd:cd05037    220 EDQH-------QLPAPDCAELAELIMQCWTYePTKRPS 250
STKc_PLK4 cd14186
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the ...
1-193 1.15e-10

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK4, also called SAK or STK18, is structurally different from other PLKs in that it contains only one polo box that can form two adjacent polo boxes and a functional PDB by homodimerization. It is required for late mitotic progression, cell survival, and embryonic development. It localizes to centrosomes and is required for centriole duplication and chromosomal stability. Overexpression of PLK4 may be associated with colon tumors. The PLK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271088 [Multi-domain]  Cd Length: 256  Bit Score: 63.34  E-value: 1.15e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAh 80
Cdd:cd14186     80 LEMCHNGEMSRYLKNRKKP------FTEDEARHFMH---QIVTGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA- 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYK---EDYYL---TPErlwvplrWAAPELLGE-LHGsfvlvdqsRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAF 153
Cdd:cd14186    150 TQLKmphEKHFTmcgTPN-------YISPEIATRsAHG--------LESDVWSLGCMFYTLL-VGRPPFDTDTVKNTLNK 213
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  154 VVRQQHVKLArpRLKLPYADYWYDILQscwRPPAQRPSAS 193
Cdd:cd14186    214 VVLADYEMPA--FLSREAQDLIHQLLR---KNPADRLSLS 248
STKc_MST3_like cd06609
Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs ...
1-195 1.25e-10

Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270786 [Multi-domain]  Cd Length: 274  Bit Score: 63.80  E-value: 1.25e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELpprdLRtlqrmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd06609     78 MEYCGGGSVLDLLKPGPLDETYIAFI----LR-------EVLLGLEYLHSEGKIHRDIKAANILLSEEGDVKLADFGVSg 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 ----HSNYKEDYYLTPerlwvplRWAAPEllgelhgsfVLVDQSRES--NVWSLGVTLWELFEfGAQPYRHLSDEEVLaF 153
Cdd:cd06609    147 qltsTMSKRNTFVGTP-------FWMAPE---------VIKQSGYDEkaDIWSLGITAIELAK-GEPPLSDLHPMRVL-F 208
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  154 VVrqqhVKLARPRLKLP-YADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd06609    209 LI----PKNNPPSLEGNkFSKPFKDFVELCLNKdPKERPSAKEL 248
STKc_ATG1_ULK_like cd14009
Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like ...
1-166 1.38e-10

Catalytic domain of the Serine/Threonine kinases, Autophagy-related protein 1 and Unc-51-like kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes yeast ATG1 and metazoan homologs including vertebrate ULK1-3. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. It is involved in nutrient sensing and signaling, the assembly of autophagy factors and the execution of autophagy. In metazoans, ATG1 homologs display additional functions. Unc-51 and ULKs have been implicated in neuronal and axonal development. The ATG1/ULK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270911 [Multi-domain]  Cd Length: 251  Bit Score: 63.01  E-value: 1.38e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAqrppEGMSPELPPRDLrtLQrmglEIARGLAHLHSHNYVHSDLALRNCLLTS---DLTVRIGDYG 77
Cdd:cd14009     71 LEYCAGGDLSQYIRK----RGRLPEAVARHF--MQ----QLASGLKFLRSKNIIHRDLKPQNLLLSTsgdDPVLKIADFG 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAHsnykedyYLTPERLW-----VPLrWAAPELLgelhgsfvlvdQSRESNV----WSLGVTLWELFeFGAQPYRHLSDE 148
Cdd:cd14009    141 FAR-------SLQPASMAetlcgSPL-YMAPEIL-----------QFQKYDAkadlWSVGAILFEML-VGKPPFRGSNHV 200
                          170
                   ....*....|....*....
gi 1720423198  149 EVLAFVVRQQHV-KLARPR 166
Cdd:cd14009    201 QLLRNIERSDAViPFPIAA 219
STKc_Nek3 cd08219
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
1-195 1.48e-10

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173759 [Multi-domain]  Cd Length: 255  Bit Score: 63.07  E-value: 1.48e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspELPPRDlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--- 77
Cdd:cd08219     77 MEYCDGGDLMQKIKLQRG------KLFPED--TILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGsar 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 -LAHS-NYKEDYYLTPerLWVPlrwaaPELLGELhgsfvlvDQSRESNVWSLGVTLWEL----FEFGAQPYRHLSdeevl 151
Cdd:cd08219    149 lLTSPgAYACTYVGTP--YYVP-----PEIWENM-------PYNNKSDIWSLGCILYELctlkHPFQANSWKNLI----- 209
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198  152 afvvrqqhVKLARPRLKLPYADYWYD----ILQSCWRPPAQRPSASDL 195
Cdd:cd08219    210 --------LKVCQGSYKPLPSHYSYElrslIKQMFKRNPRSRPSATTI 249
STKc_STK10 cd06644
Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase ...
30-195 1.71e-10

Catalytic domain of the Serine/Threonine Kinase, STK10 (also called Lymphocyte-Oriented Kinase or LOK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK10/LOK is also called polo-like kinase kinase 1 in Xenopus (xPlkk1). It is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132975 [Multi-domain]  Cd Length: 292  Bit Score: 63.51  E-value: 1.71e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYK-----EDYYLTPerlwvplRWAAPE 104
Cdd:cd06644    111 QIQVICRQMLE---ALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKtlqrrDSFIGTP-------YWMAPE 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LlgelhgsfVLVDQSRES------NVWSLGVTLWELFEFgAQPYRHLSDEEVLAFVVRQQHVKLARP-RLKLPYADYWYD 177
Cdd:cd06644    181 V--------VMCETMKDTpydykaDIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSEPPTLSQPsKWSMEFRDFLKT 251
                          170
                   ....*....|....*...
gi 1720423198  178 ILQscwRPPAQRPSASDL 195
Cdd:cd06644    252 ALD---KHPETRPSAAQL 266
STKc_MST1_2 cd06612
Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; ...
44-195 2.90e-10

Catalytic domain of the Serine/Threonine Kinases, Mammalian STe20-like protein kinase 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 and MEKK1 by acting as a MAPK kinase kinase kinase. Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132943 [Multi-domain]  Cd Length: 256  Bit Score: 62.28  E-value: 2.90e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG----LAHSNYKEDYYL-TPerlwvplRWAAPELLGElhgsfvlVDQ 118
Cdd:cd06612    111 GLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGvsgqLTDTMAKRNTVIgTP-------FWMAPEVIQE-------IGY 176
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198  119 SRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLP-YADYwydILQSCWRPPAQRPSASDL 195
Cdd:cd06612    177 NNKADIWSLGITAIEMAE-GKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPeFNDF---VKKCLVKDPEERPSAIQL 250
STKc_TAO cd06607
Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs ...
39-195 3.86e-10

Catalytic domain of the Serine/Threonine Kinases, Thousand-and-One Amino acids proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270784 [Multi-domain]  Cd Length: 258  Bit Score: 62.08  E-value: 3.86e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIA-------RGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL-TPerlwvplRWAAPELL---- 106
Cdd:cd06607    101 VEIAaichgalQGLAYLHSHNRIHRDVKAGNILLTEPGTVKLADFGSASLVCPANSFVgTP-------YWMAPEVIlamd 173
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  107 -GELHGSfvlVDqsresnVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLArprlKLPYADYWYDILQSCWR- 184
Cdd:cd06607    174 eGQYDGK---VD------VWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNDSPTLS----SGEWSDDFRNFVDSCLQk 239
                          170
                   ....*....|.
gi 1720423198  185 PPAQRPSASDL 195
Cdd:cd06607    240 IPQDRPSAEDL 250
STKc_BRSK1_2 cd14081
Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the ...
1-142 3.95e-10

Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BRSK1, also called SAD-B or SAD1 (Synapses of Amphids Defective homolog 1), and BRSK2, also called SAD-A, are highly expressed in mammalian forebrain. They play important roles in establishing neuronal polarity. BRSK1/2 double knock-out mice die soon after birth, showing thin cerebral cortices due to disordered subplate layers and neurons that lack distinct axons and dendrites. BRSK1 regulates presynaptic neurotransmitter release. Its activity fluctuates during cell cysle progression and it acts as a regulator of centrosome duplication. BRSK2 is also abundant in pancreatic islets, where it is involved in the regulation of glucose-stimulated insulin secretion. The BRSK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270983 [Multi-domain]  Cd Length: 255  Bit Score: 61.89  E-value: 3.95e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14081     80 LEYVSGGELFDYLVKKGR-------LTEKEARKFFR---QIISALDYCHSHSICHRDLKPENLLLDEKNNIKIADFGMAS 149
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   81 snykedyyLTPERLWV-----PLRWAAPELL-GE-LHGsfvlvdqsRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14081    150 --------LQPEGSLLetscgSPHYACPEVIkGEkYDG--------RKADIWSCGVILYALL-VGALPF 201
STKc_MAP4K4_6_N cd06636
N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase ...
40-195 4.13e-10

N-terminal Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. The MAP4K4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270806 [Multi-domain]  Cd Length: 282  Bit Score: 62.33  E-value: 4.13e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS-----NYKEDYYLTPerlwvplRWAAPELLGELHGSFV 114
Cdd:cd06636    129 EILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQldrtvGRRNTFIGTP-------YWMAPEVIACDENPDA 201
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 LVDQsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRlklpYADYWYDILQSCW-RPPAQRPSAS 193
Cdd:cd06636    202 TYDY--RSDIWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRNPPPKLKSKK----WSKKFIDFIEGCLvKNYLSRPSTE 274

                   ..
gi 1720423198  194 DL 195
Cdd:cd06636    275 QL 276
STKc_EIF2AK3_PERK cd14048
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
1-195 4.52e-10

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 3 or PKR-like Endoplasmic Reticulum Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PERK (or EIF2AK3) is a type-I ER transmembrane protein containing a luminal domain bound with the chaperone BiP under unstressed conditions and a cytoplasmic catalytic kinase domain. In response to the accumulation of misfolded or unfolded proteins in the ER, PERK is activated through the release of BiP, allowing it to dimerize and autophosphorylate. It functions as the central regulator of translational control during the Unfolded Protein Response (UPR) pathway. In addition to the eIF-2 alpha subunit, PERK also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PERK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270950 [Multi-domain]  Cd Length: 281  Bit Score: 62.20  E-value: 4.52e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAqrppegmSPELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd14048     94 MQLCRKENLKDWMNR-------RCTMESRELFVCLNIFKQIASAVEYLHSKGLIHRDLKPSNVFFSLDDVVKVGDFGLVt 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYY--LTPERLW------VPLR-WAAPEllgELHGSfvlvDQSRESNVWSLGVTLWEL-FEFGAQPYR--HLSD 147
Cdd:cd14048    167 AMDQGEPEQtvLTPMPAYakhtgqVGTRlYMSPE---QIHGN----QYSEKVDIFALGLILFELiYSFSTQMERirTLTD 239
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  148 EEVLAFvvrqqhvklarPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd14048    240 VRKLKF-----------PALFTNKYPEERDMVQQMLSPsPSERPEAHEV 277
STKc_MEKK4 cd06626
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
1-196 5.40e-10

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK4 is a MAPK kinase kinase that phosphorylates and activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270796 [Multi-domain]  Cd Length: 265  Bit Score: 61.55  E-value: 5.40e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP-PEGMspelpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd06626     78 MEYCQEGTLEELLRHGRIlDEAV-----------IRVYTLQLLEGLAYLHENGIVHRDIKPANIFLDSNGLIKLGDFGSA 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERL--WV--PLrWAAPELL--GELHGSFvlvdqsRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAF 153
Cdd:cd06626    147 VKLKNNTTTMAPGEVnsLVgtPA-YMAPEVItgNKGEGHG------RAADIWSLGCVVLEMAT-GKRPWSELDNEWAIMY 218
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  154 VVRQQHVKLARPRLKLpyADYWYDILQSCW-RPPAQRPSASDLQ 196
Cdd:cd06626    219 HVGMGHKPPIPDSLQL--SPEGKDFLSRCLeSDPKKRPTASELL 260
STKc_CMGC cd05118
Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the ...
31-195 7.99e-10

Catalytic domain of CMGC family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and other kinases. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Other members of the CMGC family include casein kinase 2 (CK2), Dual-specificity tYrosine-phosphorylated and -Regulated Kinase (DYRK), Glycogen Synthase Kinase 3 (GSK3), among many others. The CMGC family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270688 [Multi-domain]  Cd Length: 249  Bit Score: 60.71  E-value: 7.99e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   31 LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDL-TVRIGDYGLAHSnYKEDYYlTPErlwVPLRW-AAPELLGE 108
Cdd:cd05118    100 LDLIKSYLYQLLQALDFLHSNGIIHRDLKPENILINLELgQLKLADFGLARS-FTSPPY-TPY---VATRWyRAPEVLLG 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  109 LHGSFVLVDqsresnVWSLGVTLWELFeFGaqpyRHL----SDEEVLAFVVRqqhvKLARPRLKlpyadywyDILQSCWR 184
Cdd:cd05118    175 AKPYGSSID------IWSLGCILAELL-TG----RPLfpgdSEVDQLAKIVR----LLGTPEAL--------DLLSKMLK 231
                          170
                   ....*....|..
gi 1720423198  185 -PPAQRPSASDL 195
Cdd:cd05118    232 yDPAKRITASQA 243
STKc_ERK5 cd07855
Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; ...
40-134 8.47e-10

Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ERK5 (also called Big MAPK1 (BMK1) or MAPK7) has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. MAPKs are important mediators of cellular responses to extracellular signals. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270842 [Multi-domain]  Cd Length: 336  Bit Score: 62.00  E-value: 8.47e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH--SNYKED--YYLTPerlWVPLRW-AAPELLgelhgsFV 114
Cdd:cd07855    117 QLLRGLKYIHSANVIHRDLKPSNLLVNENCELKIGDFGMARglCTSPEEhkYFMTE---YVATRWyRAPELM------LS 187
                           90       100
                   ....*....|....*....|
gi 1720423198  115 LVDQSRESNVWSLGVTLWEL 134
Cdd:cd07855    188 LPEYTQAIDMWSVGCIFAEM 207
STKc_EIF2AK cd13996
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
1-195 9.35e-10

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: General Control Non-derepressible-2 (GCN2) which is activated during amino acid or serum starvation; protein kinase regulated by RNA (PKR) which is activated by double stranded RNA; heme-regulated inhibitor kinase (HRI) which is activated under heme-deficient conditions; and PKR-like endoplasmic reticulum kinase (PERK) which is activated when misfolded proteins accumulate in the ER. The EIF2AK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270898 [Multi-domain]  Cd Length: 273  Bit Score: 61.15  E-value: 9.35e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppEGMSPELPPRDLRTlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLT-SDLTVRIGDYGLA 79
Cdd:cd13996     83 MELCEGGTLRDWID-----RRNSSSKNDRKLAL--ELFKQILKGVSYIHSKGIVHRDLKPSNIFLDnDDLQVKIGDFGLA 155
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNYKEDYYLTPERLWVPLR------------WAAPELlgeLHGSFVlvdqSRESNVWSLGVTLWEL---FEFGAQPYRH 144
Cdd:cd13996    156 TSIGNQKRELNNLNNNNNGNtsnnsvgigtplYASPEQ---LDGENY----NEKADIYSLGIILFEMlhpFKTAMERSTI 228
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198  145 LSDeevlafvVRqqhvklarpRLKLPyaDY-------WYDILQSCWRP-PAQRPSASDL 195
Cdd:cd13996    229 LTD-------LR---------NGILP--ESfkakhpkEADLIQSLLSKnPEERPSAEQL 269
PKc_Myt1 cd14050
Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze ...
1-195 1.02e-09

Catalytic domain of the Dual-specificity protein kinase, Myt1; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Myt1 is a cytoplasmic cell cycle checkpoint kinase that can keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of N-terminal thr (T14) and tyr (Y15) residues, leading to the delay of meiosis I entry. Meiotic progression is ensured by a two-step inhibition and downregulation of Myt1 by CDK1/XRINGO and p90Rsk during oocyte maturation. In addition, Myt1 targets cyclin B1/B2 and is essential for Golgi and ER assembly during telophase. In Drosophila, Myt1 may be a downstream target of Notch during eye development. The Myt1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270952 [Multi-domain]  Cd Length: 249  Bit Score: 60.40  E-value: 1.02e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLgDLKRYLRAQrppegmsPELPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14050     80 TELCDT-SLQQYCEET-------HSLPES---EVWNILLDLLKGLKHLHDHGLIHLDIKPANIFLSKDGVCKLGDFGLVV 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERlwvPLRWAAPELlgeLHGSFvlvdqSRESNVWSLGVTLWELfefgaQPYRHLSDEEVLAFVVRQQHV 160
Cdd:cd14050    149 ELDKEDIHDAQEG---DPRYMAPEL---LQGSF-----TKAADIFSLGITILEL-----ACNLELPSGGDGWHQLRQGYL 212
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1720423198  161 KlarPRLKLPYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd14050    213 P---EEFTAGLSPELRSIIKLMMDPdPERRPTAEDL 245
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
1-149 1.39e-09

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 60.39  E-value: 1.39e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14010     73 VEYCTGGDLETLLRQDG-------NLPES---SVRKFGRDLVRGLHYIHSKGIIYCDLKPSNILLDGNGTLKLSDFGLAR 142
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 --------------SNYKEDYYLTPERLWVPLRWAAPELL-GELHgsfvlvdqSRESNVWSLGVTLWELFeFGAQPYRHL 145
Cdd:cd14010    143 regeilkelfgqfsDEGNVNKVSKKQAKRGTPYYMAPELFqGGVH--------SFASDLWALGCVLYEMF-TGKPPFVAE 213

                   ....
gi 1720423198  146 SDEE 149
Cdd:cd14010    214 SFTE 217
STKc_TNIK cd06637
Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs ...
40-195 1.71e-09

Catalytic domain of the Serine/Threonine Kinase, Traf2- and Nck-Interacting Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270807 [Multi-domain]  Cd Length: 296  Bit Score: 60.50  E-value: 1.71e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS-----NYKEDYYLTPerlwvplRWAAPELLGELHGSFV 114
Cdd:cd06637    119 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQldrtvGRRNTFIGTP-------YWMAPEVIACDENPDA 191
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 LVDqsRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQqhvklARPRLK-LPYADYWYDILQSCW-RPPAQRPSA 192
Cdd:cd06637    192 TYD--FKSDLWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRN-----PAPRLKsKKWSKKFQSFIESCLvKNHSQRPST 263

                   ...
gi 1720423198  193 SDL 195
Cdd:cd06637    264 EQL 266
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
36-205 1.99e-09

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 59.80  E-value: 1.99e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   36 RMGLEIARGLAHLHSHNYVHSDLALRNCLLTSD---LTVRIGDYGLAHSnyKEDYYLTPERLWV---PLrWAAPELL-GE 108
Cdd:cd14155     92 KLALDIARGLSYLHSKGIFHRDLTSKNCLIKRDengYTAVVGDFGLAEK--IPDYSDGKEKLAVvgsPY-WMAPEVLrGE 168
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  109 LHgsfvlvdqSRESNVWSLGVTLWELFEfgaqpyRHLSDEEVLAfvvRQQHVKLARPRLKLPYADYWYDILQ----SCWR 184
Cdd:cd14155    169 PY--------NEKADVFSYGIILCEIIA------RIQADPDYLP---RTEDFGLDYDAFQHMVGDCPPDFLQlafnCCNM 231
                          170       180
                   ....*....|....*....|.
gi 1720423198  185 PPAQRPSASDLQLQLTYLLSE 205
Cdd:cd14155    232 DPKSRPSFHDIVKTLEEILEK 252
PK_GC-A_B cd14042
Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The ...
41-199 2.22e-09

Pseudokinase domain of the membrane Guanylate Cyclase receptors, GC-A and GC-B; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-A binds and is activated by the atrial and B-type natriuretic peptides, ANP and BNP, which are important in blood pressure regulation and cardiac pathophysiology. GC-B binds the C-type natriuretic peptide, CNP, which is a potent vasorelaxant and functions in vascular remodeling and bone growth regulation. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-A/B subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270944 [Multi-domain]  Cd Length: 279  Bit Score: 59.92  E-value: 2.22e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLH-SHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELlgeLHGSFVLVDQS 119
Cdd:cd14042    112 IVKGMHYLHdSEIKSHGNLKSSNCVVDSRFVLKITDFGLHSFRSGQEPPDDSHAYYAKLLWTAPEL---LRDPNPPPPGT 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  120 RESNVWSLGVTLWELF----EFGAQPYrHLSDEEVLAFVVRQQHVKLARPRL-KLPYADYWYDILQSCW-RPPAQRPSAS 193
Cdd:cd14042    189 QKGDVYSFGIILQEIAtrqgPFYEEGP-DLSPKEIIKKKVRNGEKPPFRPSLdELECPDEVLSLMQRCWaEDPEERPDFS 267

                   ....*.
gi 1720423198  194 DLQLQL 199
Cdd:cd14042    268 TLRNKL 273
STKc_CAMK cd05117
The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of ...
1-131 2.73e-09

The catalytic domain of CAMK family Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. CAMKIV is implicated in regulating several transcription factors like CREB, MEF2, and retinoid orphan receptors, as well as in T-cell development and signaling. The CAMK family also consists of other related kinases including the Phosphorylase kinase Gamma subunit (PhKG), the C-terminal kinase domains of Ribosomal S6 kinase (RSK) and Mitogen and stress-activated kinase (MSK), Doublecortin-like kinase (DCKL), and the MAPK-activated protein kinases MK2, MK3, and MK5, among others. The CAMK family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270687 [Multi-domain]  Cd Length: 258  Bit Score: 59.41  E-value: 2.73e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDL-KRYLRAQRPPEgmspelppRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTS---DLTVRIGDY 76
Cdd:cd05117     78 MELCTGGELfDRIVKKGSFSE--------REAAKIMK---QILSAVAYLHSQGIVHRDLKPENILLASkdpDSPIKIIDF 146
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   77 GLAhSNYKEDYYL-----TPErlwvplrWAAPE-LLGELHGsfvlvdqsRESNVWSLGVTL 131
Cdd:cd05117    147 GLA-KIFEEGEKLktvcgTPY-------YVAPEvLKGKGYG--------KKCDIWSLGVIL 191
STKc_PLK1 cd14187
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the ...
40-195 2.95e-09

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK1 functions as a positive regulator of mitosis, meiosis, and cytokinesis. Its localization changes during mitotic progression; associating first with centrosomes in prophase, with kinetochores in prometaphase and metaphase, at the central spindle in anaphase, and in the midbody during telophase. It carries multiple functions throughout the cell cycle through interactions with differrent substrates at these specific subcellular locations. PLK1 is overexpressed in many human cancers and is associated with poor prognosis. The PLK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271089 [Multi-domain]  Cd Length: 265  Bit Score: 59.56  E-value: 2.95e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnYKEDYYLTPER-LWVPLRWAAPELLGELHGSFvlvdq 118
Cdd:cd14187    115 QIILGCQYLHRNRVIHRDLKLGNLFLNDDMEVKIGDFGLA---TKVEYDGERKKtLCGTPNYIAPEVLSKKGHSF----- 186
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198  119 srESNVWSLGVTLWELFeFGAQPYRHLSDEEVLafvVRQQHVKLARPRLKLPYADywyDILQSCWRP-PAQRPSASDL 195
Cdd:cd14187    187 --EVDIWSIGCIMYTLL-VGKPPFETSCLKETY---LRIKKNEYSIPKHINPVAA---SLIQKMLQTdPTARPTINEL 255
STKc_CDK4 cd07863
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs ...
8-135 2.99e-09

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of TGF-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143368 [Multi-domain]  Cd Length: 288  Bit Score: 59.59  E-value: 2.99e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLrAQRPPegmsPELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnYKEDY 87
Cdd:cd07863     92 DLRTYL-DKVPP----PGLPAETIKDLMR---QFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI-YSCQM 162
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198   88 YLTPerLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELF 135
Cdd:cd07863    163 ALTP--VVVTLWYRAPEVL--LQSTY-----ATPVDMWSVGCIFAEMF 201
STKc_TAO2 cd06634
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze ...
1-205 3.20e-09

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 possesses mitogen-activated protein kinase (MAPK) kinase kinase activity and activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating their respective MAP/ERK kinases, MEK3/MEK6 and MKK4/MKK7. It contains a long C-terminal extension with autoinhibitory segments, and is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor, interleukin 1, and Toll-like receptor. The TAO2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270804 [Multi-domain]  Cd Length: 308  Bit Score: 59.65  E-value: 3.20e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCqLGDLKRYLRAQRPPegmspelpprdlrtLQRMglEIA-------RGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd06634     94 MEYC-LGSASDLLEVHKKP--------------LQEV--EIAaithgalQGLAYLHSHNMIHRDVKAGNILLTEPGLVKL 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYL-TPerlwvplRWAAPELLgelhgsfVLVDQSR---ESNVWSLGVTLWELFEfGAQPYRHLSDEE 149
Cdd:cd06634    157 GDFGSASIMAPANSFVgTP-------YWMAPEVI-------LAMDEGQydgKVDVWSLGITCIELAE-RKPPLFNMNAMS 221
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198  150 VLAFVVRQQHVKLARPRlklpYADYWYDILQSCWRP-PAQRPSaSDLQLQLTYLLSE 205
Cdd:cd06634    222 ALYHIAQNESPALQSGH----WSEYFRNFVDSCLQKiPQDRPT-SDVLLKHRFLLRE 273
STKc_TAO1 cd06635
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze ...
1-205 3.88e-09

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. TAO proteins possess MAPK kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270805 [Multi-domain]  Cd Length: 317  Bit Score: 59.68  E-value: 3.88e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCqLGDLKRYLRAQRPPegmspeLPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd06635    104 MEYC-LGSASDLLEVHKKP------LQEIEIAAITHGALQ---GLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSAS 173
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYL-TPerlwvplRWAAPELLgelhgsfVLVDQSR---ESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd06635    174 IASPANSFVgTP-------YWMAPEVI-------LAMDEGQydgKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQ 238
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198  157 QQHVKLARPRlklpYADYWYDILQSCWRP-PAQRPSASDLqLQLTYLLSE 205
Cdd:cd06635    239 NESPTLQSNE----WSDYFRNFVDSCLQKiPQDRPTSEEL-LKHMFVLRE 283
STKc_TSSK1_2-like cd14165
Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; ...
1-164 4.11e-09

Catalytic domain of testis-specific serine/threonine kinase 1, TSSK2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK1 and TSSK2 are expressed specifically in meiotic and postmeiotic spermatogenic cells, respectively. TSSK2 is localized in the sperm neck, equatorial segment, and mid-piece of the sperm tail. Both TSSK1 and TSSK2 phosphorylate their common substrate TSKS (testis-specific-kinase-substrate). TSSK1/TSSK2 double knock-out mice are sterile without manifesting other defects, making these kinases viable targets for male contraception. The TSSK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271067 [Multi-domain]  Cd Length: 263  Bit Score: 59.02  E-value: 4.11e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQ-RPPEGMSpelpprdlrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14165     81 MELGVQGDLLEFIKLRgALPEDVA-----------RKMFHQLSSAIKYCHELDIVHRDLKCENLLLDKDFNIKLTDFGFS 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HS-NYKEDYYLTPERLWV-PLRWAAPELLGElhgsfvLVDQSRESNVWSLGVTLWeLFEFGAQPYRHLSDEEVLAfVVRQ 157
Cdd:cd14165    150 KRcLRDENGRIVLSKTFCgSAAYAAPEVLQG------IPYDPRIYDIWSLGVILY-IMVCGSMPYDDSNVKKMLK-IQKE 221

                   ....*..
gi 1720423198  158 QHVKLAR 164
Cdd:cd14165    222 HRVRFPR 228
STKc_CDK7 cd07841
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs ...
1-134 4.69e-09

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270833 [Multi-domain]  Cd Length: 298  Bit Score: 59.12  E-value: 4.69e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlGDLKRYLRAqrppegMSPELPPRDLRTLQRMGLeiaRGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07841     81 FEFME-TDLEKVIKD------KSIVLTPADIKSYMLMTL---RGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLAR 150
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   81 SNYKEDYYLTPErlwVPLRW-AAPELL--GELHGSFVlvdqsresNVWSLGVTLWEL 134
Cdd:cd07841    151 SFGSPNRKMTHQ---VVTRWyRAPELLfgARHYGVGV--------DMWSVGCIFAEL 196
STKc_TGFbR2_like cd14055
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II ...
1-134 5.31e-09

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as TGFbR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. TGFbR2 acts as the receptor for TGFbeta, which is crucial in growth control and homeostasis in many different tissues. It plays roles in regulating apoptosis and in maintaining the balance between self renewal and cell loss. It also plays a key role in maintaining vascular integrity and in regulating responses to genotoxic stress. Mutations in TGFbR2 can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. The TGFbR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270957 [Multi-domain]  Cd Length: 295  Bit Score: 58.93  E-value: 5.31e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppegmspelpPRDLRTLQRMGLEIARGLAHLHSHNY---------VHSDLALRNCLLTSDLTV 71
Cdd:cd14055     78 TAYHENGSLQDYLTRH-----------ILSWEDLCKMAGSLARGLAHLHSDRTpcgrpkipiAHRDLKSSNILVKNDGTC 146
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   72 RIGDYGLAhsnYKEDYYLTPERL------WVPlRWAAPELLgELHGSFVLVDQSRESNVWSLGVTLWEL 134
Cdd:cd14055    147 VLADFGLA---LRLDPSLSVDELansgqvGTA-RYMAPEAL-ESRVNLEDLESFKQIDVYSMALVLWEM 210
STKc_Nek6 cd08228
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
1-193 5.47e-09

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270865 [Multi-domain]  Cd Length: 268  Bit Score: 58.50  E-value: 5.47e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-- 78
Cdd:cd08228     81 LELADAGDLSQMIKYFKKQKRLIPE------RTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLgr 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 --------AHSNYKEDYYLTPERLwvplrwaapellGELHGSFvlvdqsrESNVWSLGVTLWELFEFGAQPYrhlSDEEV 150
Cdd:cd08228    155 ffsskttaAHSLVGTPYYMSPERI------------HENGYNF-------KSDIWSLGCLLYEMAALQSPFY---GDKMN 212
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198  151 LaFVVRQQHVKLARPRL-KLPYADYWYDILQSCWRP-PAQRPSAS 193
Cdd:cd08228    213 L-FSLCQKIEQCDYPPLpTEHYSEKLRELVSMCIYPdPDQRPDIG 256
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
1-194 5.62e-09

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 58.05  E-value: 5.62e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrPPEGMSPElpprDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTS--DLTVRIGDYGL 78
Cdd:cd14006     68 LELCSGGELLDRLA---ERGSLSEE----EVRTYMRQLLE---GLQYLHNHHILHLDLKPENILLADrpSPQIKIIDFGL 137
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHsNYKEDYYL-----TPErlwvplrWAAPELlgeLHGSFVlvdqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAF 153
Cdd:cd14006    138 AR-KLNPGEELkeifgTPE-------FVAPEI---VNGEPV----SLATDMWSIGVLTYVLLS-GLSPFLGEDDQETLAN 201
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198  154 VVRQQhVKLARPrlklpyadYWYDI-----------LQscwRPPAQRPSASD 194
Cdd:cd14006    202 ISACR-VDFSEE--------YFSSVsqeakdfirklLV---KEPRKRPTAQE 241
STKc_CDKL cd07833
Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs ...
1-202 5.69e-09

Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270827 [Multi-domain]  Cd Length: 288  Bit Score: 58.87  E-value: 5.69e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQ---LGDLKRYlraqrpPEGMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:cd07833     79 FEYVErtlLELLEAS------PGGLPPD-------AVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFG 145
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAHS-NYKEDYYLTPErlwVPLRW-AAPELLgelhgsfvLVDQS--RESNVWSLGVTLWELFE----------------- 136
Cdd:cd07833    146 FARAlTARPASPLTDY---VATRWyRAPELL--------VGDTNygKPVDVWAIGCIMAELLDgeplfpgdsdidqlyli 214
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198  137 ---FGAQPYRHLSDEE-------VLAFVVRQQHVKLARPRLKLPYAdyWYDILQSCWRP-PAQRPSASDLqLQLTYL 202
Cdd:cd07833    215 qkcLGPLPPSHQELFSsnprfagVAFPEPSQPESLERRYPGKVSSP--ALDFLKACLRMdPKERLTCDEL-LQHPYF 288
STKc_TSSK4-like cd14162
Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs ...
1-142 5.85e-09

Catalytic domain of testis-specific serine/threonine kinase 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK4, also called TSSK5, is expressed in testis from haploid round spermatids to mature spermatozoa. It phosphorylates Cre-Responsive Element Binding protein (CREB), facilitating the binding of CREB to the specific cis cAMP responsive element (CRE), which is important in activating genes related to germ cell differentiation. Mutations in the human TSSK4 gene is associated with infertile Chinese men with impaired spermatogenesis. The TSSK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271064 [Multi-domain]  Cd Length: 259  Bit Score: 58.46  E-value: 5.85e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppeGMSPElpPRDlRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14162     79 MELAENGDLLDYIRKN----GALPE--PQA-RRWFR---QLVAGVEYCHSKGVVHRDLKCENLLLDKNNNLKITDFGFAR 148
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKedyylTPERLWVPLR-------WAAPELL-GELHGSFVlvdqsreSNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14162    149 GVMK-----TKDGKPKLSEtycgsyaYASPEILrGIPYDPFL-------SDIWSMGVVLYTMV-YGRLPF 205
PKc_MAPKK cd06605
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase ...
1-195 6.27e-09

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAPK, which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPKK kinase (MAPKKK or MKKK or MAP3K). There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270782 [Multi-domain]  Cd Length: 265  Bit Score: 58.51  E-value: 6.27e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYL-RAQRPPEgmspelpprdlRTLQRMGLEIARGLAHLHS-HNYVHSDLALRNCLLTSDLTVRIGDYG- 77
Cdd:cd06605     78 MEYMDGGSLDKILkEVGRIPE-----------RILGKIAVAVVKGLIYLHEkHKIIHRDVKPSNILVNSRGQVKLCDFGv 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 -------LAHSNYKEDYYLTPERLwVPLRWaapellgelhgsfvlvdqSRESNVWSLGVTLWELfEFGAQPY------RH 144
Cdd:cd06605    147 sgqlvdsLAKTFVGTRSYMAPERI-SGGKY------------------TVKSDIWSLGLSLVEL-ATGRFPYpppnakPS 206
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  145 LSDEEVLAFVVRQQHVKLARPRLKLPYADYWYDILQscwRPPAQRPSASDL 195
Cdd:cd06605    207 MMIFELLSYIVDEPPPLLPSGKFSPDFQDFVSQCLQ---KDPTERPSYKEL 254
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
40-195 6.50e-09

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 58.53  E-value: 6.50e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA----HSNYKEDYYL-TPerlwvplRWAAPELLGELHGSFv 114
Cdd:cd06642    109 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAgqltDTQIKRNTFVgTP-------FWMAPEVIKQSAYDF- 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQqhvklARPRLKLPYADYWYDILQSCW-RPPAQRPSAS 193
Cdd:cd06642    181 ------KADIWSLGITAIELAK-GEPPNSDLHPMRVLFLIPKN-----SPPTLEGQHSKPFKEFVEACLnKDPRFRPTAK 248

                   ..
gi 1720423198  194 DL 195
Cdd:cd06642    249 EL 250
STKc_TGFbR_I cd14056
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type ...
2-192 6.72e-09

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of type I receptors for the TGFbeta family of secreted signaling molecules including TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation through trans-phosphorylation by type II receptors, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. They are inhibited by the immunophilin FKBP12, which is thought to control leaky signaling caused by receptor oligomerization in the absence of ligand. The TGFbR-I subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270958 [Multi-domain]  Cd Length: 287  Bit Score: 58.44  E-value: 6.72e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQrppegmspELpprDLRTLQRMGLEIARGLAHLHS--HNY------VHSDLALRNCLLTSDLTVRI 73
Cdd:cd14056     73 EYHEHGSLYDYLQRN--------TL---DTEEALRLAYSAASGLAHLHTeiVGTqgkpaiAHRDLKSKNILVKRDGTCCI 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLA--HSNYKEDYYLTPERLWVPLRWAAPELLGE-LHGSFvlVDQSRESNVWSLGVTLWE---------LFEFGAQP 141
Cdd:cd14056    142 ADLGLAvrYDSDTNTIDIPPNPRVGTKRYMAPEVLDDsINPKS--FESFKMADIYSFGLVLWEiarrceiggIAEEYQLP 219
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  142 YRHL-----SDEEVLAFVVRQQhvklARPRLKlpyaDYWYD---------ILQSCWRP-PAQRPSA 192
Cdd:cd14056    220 YFGMvpsdpSFEEMRKVVCVEK----LRPPIP----NRWKSdpvlrsmvkLMQECWSEnPHARLTA 277
PTKc_Wee1_fungi cd14052
Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the ...
2-79 6.80e-09

Catalytic domain of the Protein Tyrosine Kinases, Fungal Wee1 proteins; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of fungal Wee1 proteins, also called Swe1 in budding yeast and Mik1 in fission yeast. Yeast Wee1 is required to control cell size. Wee1 is a cell cycle checkpoint kinase that helps keep the cyclin-dependent kinase CDK1 in an inactive state through phosphorylation of an N-terminal tyr (Y15) residue. During the late G2 phase, CDK1 is activated and mitotic entry is promoted by the removal of this inhibitory phosphorylation by the phosphatase Cdc25. Although Wee1 is functionally a tyr kinase, it is more closely related to serine/threonine kinases (STKs). It contains a catalytic kinase domain sandwiched in between N- and C-terminal regulatory domains. It is regulated by phosphorylation and degradation, and its expression levels are also controlled by circadian clock proteins. The fungal Wee1 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, other PTKs, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270954 [Multi-domain]  Cd Length: 278  Bit Score: 58.59  E-value: 6.80e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMspelppRDLRtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14052     83 ELCENGSLDVFLSELGLLGRL------DEFR-VWKILVELSLGLRFIHDHHFVHLDLKPANVLITFEGTLKIGDFGMA 153
STKc_MAK_like cd07830
Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs ...
41-135 7.06e-09

Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia, suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270824 [Multi-domain]  Cd Length: 283  Bit Score: 58.31  E-value: 7.06e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-HSNYKEDYylTPerlWVPLRW-AAPELLgeLHGSFVlvdq 118
Cdd:cd07830    108 ILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLArEIRSRPPY--TD---YVSTRWyRAPEIL--LRSTSY---- 176
                           90
                   ....*....|....*..
gi 1720423198  119 SRESNVWSLGVTLWELF 135
Cdd:cd07830    177 SSPVDIWALGCIMAELY 193
STKc_TAO3 cd06633
Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze ...
1-195 7.40e-09

Catalytic domain of the Serine/Threonine Kinase, Thousand-and-One Amino acids 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAO3 is also known as JIK (c-Jun N-terminal kinase inhibitory kinase) or KFC (kinase from chicken). It specifically activates JNK, presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. The TAO3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270803 [Multi-domain]  Cd Length: 313  Bit Score: 58.90  E-value: 7.40e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCqLGDLKRYLRAQRPPegmspelpprdlrtLQRmgLEIA-------RGLAHLHSHNYVHSDLALRNCLLTSDLTVRI 73
Cdd:cd06633    100 MEYC-LGSASDLLEVHKKP--------------LQE--VEIAaithgalQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL 162
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYL-TPerlwvplRWAAPELLgelhgsfVLVDQSR---ESNVWSLGVTLWELFEfGAQPYRHLSDEE 149
Cdd:cd06633    163 ADFGSASIASPANSFVgTP-------YWMAPEVI-------LAMDEGQydgKVDIWSLGITCIELAE-RKPPLFNMNAMS 227
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  150 VLAFVVRQQHVKLARPRLKLPYADYWYDILQscwRPPAQRPSASDL 195
Cdd:cd06633    228 ALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQ---KIPQERPSSAEL 270
STKc_NAK1_like cd06917
Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of ...
1-195 7.44e-09

Catalytic domain of Fungal Nak1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also called N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270822 [Multi-domain]  Cd Length: 277  Bit Score: 58.26  E-value: 7.44e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppegmspelpPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd06917     81 MDYCEGGSIRTLMRAG-----------PIAERYIAVIMREVLVALKFIHKDGIIHRDIKAANILVTNTGNVKLCDFGVAa 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 ----HSNYKEDYYLTPerlwvplRWAAPELLGELHGSFVLVDqsresnVWSLGVTLWELfEFGAQPYrhlSDEEvlAFVV 155
Cdd:cd06917    150 slnqNSSKRSTFVGTP-------YWMAPEVITEGKYYDTKAD------IWSLGITTYEM-ATGNPPY---SDVD--ALRA 210
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  156 RQQHVKLARPRLKL-PYADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd06917    211 VMLIPKSKPPRLEGnGYSPLLKEFVAACLDEePKDRLSADEL 252
STKc_ACVR1_ALK1 cd14142
Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin ...
1-134 1.19e-08

Catalytic domain of the Serine/Threonine Kinases, Activin Type I Receptor and Activin receptor-Like Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR1, also called Activin receptor-Like Kinase 2 (ALK2), and ALK1 act as receptors for bone morphogenetic proteins (BMPs) and they activate SMAD1/5/8. ACVR1 is widely expressed while ALK1 is limited mainly to endothelial cells. The specificity of BMP binding to type I receptors is affected by type II receptors. ACVR1 binds BMP6/7/9/10 and can also bind anti-Mullerian hormone (AMH) in the presence of AMHR2. ALK1 binds BMP9/10 as well as TGFbeta in endothelial cells. A missense mutation in the GS domain of ACVR1 causes fibrodysplasia ossificans progressiva, a complex and disabling disease characterized by congenital skeletal malformations and extraskeletal bone formation. ACVR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and AMH, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like ACVR1 and ALK1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The ACVR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271044 [Multi-domain]  Cd Length: 298  Bit Score: 57.84  E-value: 1.19e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppegmspelpPRDLRTLQRMGLEIARGLAHLHSHNY--------VHSDLALRNCLLTSDLTVR 72
Cdd:cd14142     82 THYHENGSLYDYLQRT-----------TLDHQEMLRLALSAASGLVHLHTEIFgtqgkpaiAHRDLKSKNILVKSNGQCC 150
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   73 IGDYGLAHSNYKEDYYLTP---ERLWVPlRWAAPELLGEL--HGSFvlvDQSRESNVWSLGVTLWEL 134
Cdd:cd14142    151 IADLGLAVTHSQETNQLDVgnnPRVGTK-RYMAPEVLDETinTDCF---ESYKRVDIYAFGLVLWEV 213
STKc_CCRK cd07832
Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the ...
1-156 1.32e-08

Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed; this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270826 [Multi-domain]  Cd Length: 287  Bit Score: 57.72  E-value: 1.32e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFcQLGDLKRYLRAQRPPegmspeLPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07832     79 FEY-MLSSLSEVLRDEERP------LTEAQVKRYMRMLLK---GVAYMHANRIMHRDLKPANLLISSTGVLKIADFGLAR 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKEDYYLTPERlwVPLRW-AAPELlgeLHGS---FVLVDqsresnVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd07832    149 LFSEEDPRLYSHQ--VATRWyRAPEL---LYGSrkyDEGVD------LWAVGCIFAELLN-GSPLFPGENDIEQLAIVLR 216
STKc_PhKG cd14093
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs ...
2-144 1.49e-08

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). Each subunit has tissue-specific isoforms or splice variants. Vertebrates contain two isoforms of the gamma subunit (gamma 1 and gamma 2). The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270995 [Multi-domain]  Cd Length: 272  Bit Score: 57.36  E-value: 1.49e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrppegmSPELPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhS 81
Cdd:cd14093     89 ELCRKGELFDYLTE-------VVTLSEKKTRRIMRQLFE---AVEFLHSLNIVHRDLKPENILLDDNLNVKISDFGFA-T 157
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720423198   82 NYKEDYYL-----TPERLwvplrwaAPELL----GELHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRH 144
Cdd:cd14093    158 RLDEGEKLrelcgTPGYL-------APEVLkcsmYDNAPGY-----GKEVDMWACGVIMYTLLA-GCPPFWH 216
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
1-195 1.50e-08

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 57.10  E-value: 1.50e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP-PEGMSpelpprdlrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL- 78
Cdd:cd14007     79 LEYAPNGELYKELKKQKRfDEKEA-----------AKYIYQLALALDYLHSKNIIHRDIKPENILLGSNGELKLADFGWs 147
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKE--------DYYltperlwvplrwaAPELL-GELHGSfvLVDqsresnVWSLGVTLWELFeFGAQPYRHLSDEE 149
Cdd:cd14007    148 VHAPSNRrktfcgtlDYL-------------PPEMVeGKEYDY--KVD------IWSLGVLCYELL-VGKPPFESKSHQE 205
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  150 VLAfvvrqqhvKLARPRLKLPyaDYWYD-----ILQSCWRPPAQRPSASDL 195
Cdd:cd14007    206 TYK--------RIQNVDIKFP--SSVSPeakdlISKLLQKDPSKRLSLEQV 246
STKc_PKC cd05570
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer ...
40-150 1.53e-08

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270722 [Multi-domain]  Cd Length: 318  Bit Score: 57.61  E-value: 1.53e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPERLwvplrwaAPELLGELhgsfv 114
Cdd:cd05570    104 EICLALQFLHERGIIYRDLKLDNVLLDAEGHIKIADFGMCKEGIWGGnttstFCGTPDYI-------APEILREQ----- 171
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1720423198  115 lvDQSRESNVWSLGVTLWELFeFGAQPYRHLSDEEV 150
Cdd:cd05570    172 --DYGFSVDWWALGVLLYEML-AGQSPFEGDDEDEL 204
STKc_CDK6 cd07862
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs ...
8-135 1.78e-08

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270846 [Multi-domain]  Cd Length: 290  Bit Score: 57.35  E-value: 1.78e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLraQRPPEgmsPELPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykEDY 87
Cdd:cd07862     94 DLTTYL--DKVPE---PGVPTE---TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSF 162
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198   88 YLTPERLWVPLRWAAPELLgeLHGSFvlvdqSRESNVWSLGVTLWELF 135
Cdd:cd07862    163 QMALTSVVVTLWYRAPEVL--LQSSY-----ATPVDLWSVGCIFAEMF 203
STKc_nPKC_theta_like cd05592
Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and ...
38-151 2.00e-08

Catalytic domain of the Serine/Threonine Kinases, Novel Protein Kinase C theta, delta, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. The nPKC-theta-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270744 [Multi-domain]  Cd Length: 320  Bit Score: 57.39  E-value: 2.00e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   38 GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnyKEDYYL---------TPErlwvplrWAAPELL-G 107
Cdd:cd05592    102 GAEIICGLQFLHSRGIIYRDLKLDNVLLDREGHIKIADFGMC----KENIYGenkastfcgTPD-------YIAPEILkG 170
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  108 ELHGSFVlvdqsresNVWSLGVTLWELFeFGAQPYrHLSDEEVL 151
Cdd:cd05592    171 QKYNQSV--------DWWSFGVLLYEML-IGQSPF-HGEDEDEL 204
STKc_PKB_beta cd05595
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); ...
38-172 2.37e-08

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B beta (also called Akt2); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain.The PKB-beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173686 [Multi-domain]  Cd Length: 323  Bit Score: 57.32  E-value: 2.37e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   38 GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL-----TPERLwvplrwaAPELLGElhgs 112
Cdd:cd05595    101 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMktfcgTPEYL-------APEVLED---- 169
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  113 fvlVDQSRESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAFVVRQQhvkLARPRLKLPYA 172
Cdd:cd05595    170 ---NDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDHERLFELILMEE---IRFPRTLSPEA 222
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
28-195 2.47e-08

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 56.62  E-value: 2.47e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   28 PRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA----HSNYKEDYYL-TPerlwvplRWAA 102
Cdd:cd06641     97 PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAgqltDTQIKRN*FVgTP-------FWMA 169
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  103 PELLGElhgsfvlVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQhvklaRPRLKLPYADYWYDILQSC 182
Cdd:cd06641    170 PEVIKQ-------SAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIPKNN-----PPTLEGNYSKPLKEFVEAC 236
                          170
                   ....*....|....
gi 1720423198  183 W-RPPAQRPSASDL 195
Cdd:cd06641    237 LnKEPSFRPTAKEL 250
STKc_EIF2AK2_PKR cd14047
Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor ...
1-135 2.48e-08

Catalytic domain of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 2 or Protein Kinase regulated by RNA; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKR (or EIF2AK2) contains an N-terminal double-stranded RNA (dsRNA) binding domain and a C-terminal catalytic kinase domain. It is activated by dsRNA, which is produced as a replication intermediate in virally infected cells. It plays a key role in mediating innate immune responses to viral infection. PKR is also directly activated by PACT (protein activator of PKR) and heparin, and is inhibited by viral proteins and RNAs. PKR also regulates transcription and signal transduction in diseased cells, playing roles in tumorigenesis and neurodegenerative diseases. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. The PKR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270949 [Multi-domain]  Cd Length: 267  Bit Score: 56.73  E-value: 2.48e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPegmspelpPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14047     94 MEFCEKGTLESWIEKRNGE--------KLDKVLALEIFEQITKGVEYIHSKKLIHRDLKPSNIFLVDTGKVKIGDFGLVT 165
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   81 SnYKEDYYLTPERlwVPLRWAAPEllgelhgSFVLVDQSRESNVWSLGVTLWELF 135
Cdd:cd14047    166 S-LKNDGKRTKSK--GTLSYMSPE-------QISSQDYGKEVDIYALGLILFELL 210
STKc_WNK cd13983
Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze ...
2-195 3.29e-08

Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNKs comprise a subfamily of STKs with an unusual placement of a catalytic lysine relative to all other protein kinases. They are critical in regulating ion balance and are thus, important components in the control of blood pressure. They are also involved in cell signaling, survival, proliferation, and organ development. WNKs are activated by hyperosmotic or low-chloride hypotonic stress and they function upstream of SPAK and OSR1 kinases, which regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. There are four vertebrate WNKs which show varying expression patterns. WNK1 and WNK2 are widely expressed while WNK3 and WNK4 show a more restricted expression pattern. Because mutations in human WNK1 and WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension (due to increased sodium reabsorption) and hyperkalemia (due to impaired renal potassium secretion), there are more studies conducted on these two proteins, compared to WNK2 and WNK3. The WNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270885 [Multi-domain]  Cd Length: 258  Bit Score: 56.08  E-value: 3.29e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRaqrppegmspELPPRDLRTLQRMGLEIARGLAHLHSHNY--VHSDLALRNCLLTSDL-TVRIGDYGL 78
Cdd:cd13983     82 ELMTSGTLKQYLK----------RFKRLKLKVIKSWCRQILEGLNYLHTRDPpiIHRDLKCDNIFINGNTgEVKIGDLGL 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHS-NYKEDYYL--TPErlwvplrWAAPELLGELHGSfvLVDqsresnVWSLGVTLWEL--FEF-------GAQPYRhls 146
Cdd:cd13983    152 ATLlRQSFAKSVigTPE-------FMAPEMYEEHYDE--KVD------IYAFGMCLLEMatGEYpysectnAAQIYK--- 213
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  147 deEVLAFVVRQQHVKLARPRLKlpyadywyDILQSCWRPPAQRPSASDL 195
Cdd:cd13983    214 --KVTSGIKPESLSKVKDPELK--------DFIEKCLKPPDERPSAREL 252
STKc_IRAK4 cd14158
Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; ...
42-134 3.31e-08

Catalytic domain of the Serine/Threonine kinase, Interleukin-1 Receptor Associated Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain, and a C-terminal domain; IRAK-4 lacks the C-terminal domain. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK4 plays a critical role in NFkB activation by its interaction with MyD88, which acts as a scaffold that enables IRAK4 to phosphorylate and activate IRAK1 and/or IRAK2. It also plays an important role in type I IFN production induced by TLR7/8/9. The IRAK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271060 [Multi-domain]  Cd Length: 288  Bit Score: 56.35  E-value: 3.31e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   42 ARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLWVPLRWAAPELL-GELhgsfvlvdqSR 120
Cdd:cd14158    127 ANGINYLHENNHIHRDIKSANILLDETFVPKISDFGLARASEKFSQTIMTERIVGTTAYMAPEALrGEI---------TP 197
                           90
                   ....*....|....
gi 1720423198  121 ESNVWSLGVTLWEL 134
Cdd:cd14158    198 KSDIFSFGVVLLEI 211
STKc_MEKK3_like cd06625
Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) ...
40-195 3.37e-08

Catalytic domain of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of MEKK3, MEKK2, and related proteins; all contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKK) that activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270795 [Multi-domain]  Cd Length: 260  Bit Score: 56.21  E-value: 3.37e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH-------SNYKEDYYLTPerlwvplRWAAPE-LLGELHG 111
Cdd:cd06625    110 QILEGLAYLHSNMIVHRDIKGANILRDSNGNVKLGDFGASKrlqticsSTGMKSVTGTP-------YWMSPEvINGEGYG 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  112 sfvlvdqsRESNVWSLGVTLWELFEfgAQPyrHLSDEEVLA--FVVRQQHVKlarPRLKLPYADYWYDILQSCW-RPPAQ 188
Cdd:cd06625    183 --------RKADIWSVGCTVVEMLT--TKP--PWAEFEPMAaiFKIATQPTN---PQLPPHVSEDARDFLSLIFvRNKKQ 247

                   ....*..
gi 1720423198  189 RPSASDL 195
Cdd:cd06625    248 RPSAEEL 254
PK_eIF2AK_GCN2_rpt1 cd14012
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or ...
30-196 3.96e-08

Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270914 [Multi-domain]  Cd Length: 254  Bit Score: 55.83  E-value: 3.96e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDL---TVRIGDYGLAH------SNYKEDYYLtperlwvPLRW 100
Cdd:cd14012    102 PLDTARRWTLQLLEALEYLHRNGVVHKSLHAGNVLLDRDAgtgIVKLTDYSLGKtlldmcSRGSLDEFK-------QTYW 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  101 AAPELLGelhGSFVLvdqSRESNVWSLGVTLWELfefgaqpyrhLSDEEVLafvvrqQHVKLARP-RLKLPYADYWYDIL 179
Cdd:cd14012    175 LPPELAQ---GSKSP---TRKTDVWDLGLLFLQM----------LFGLDVL------EKYTSPNPvLVSLDLSASLQDFL 232
                          170
                   ....*....|....*...
gi 1720423198  180 QSCWRP-PAQRPSASDLQ 196
Cdd:cd14012    233 SKCLSLdPKKRPTALELL 250
STKc_ACVR2 cd14053
Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the ...
30-193 4.22e-08

Catalytic domain of the Serine/Threonine Kinase, Activin Type II Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. Type II receptors, such as ACVR2, are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. Vertebrates contain two ACVR2 proteins, ACVR2a (or ActRIIA) and ACVR2b (or ActRIIB). The ACVR2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270955 [Multi-domain]  Cd Length: 290  Bit Score: 56.18  E-value: 4.22e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHS----------HNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnYKEDYYLTPERLWVPL- 98
Cdd:cd14053     90 SWNELCKIAESMARGLAYLHEdipatngghkPSIAHRDFKSKNVLLKSDLTACIADFGLA---LKFEPGKSCGDTHGQVg 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   99 --RWAAPELLgELHGSFvlvdqSRES----NVWSLGVTLWEL---FEFGAQP---YR---------HLSDEEVLAFVVrq 157
Cdd:cd14053    167 trRYMAPEVL-EGAINF-----TRDAflriDMYAMGLVLWELlsrCSVHDGPvdeYQlpfeeevgqHPTLEDMQECVV-- 238
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  158 qHVKLaRPRLKLPYADYWY-----DILQSCWRPPAQ-RPSAS 193
Cdd:cd14053    239 -HKKL-RPQIRDEWRKHPGlaqlcETIEECWDHDAEaRLSAG 278
PKc_TOPK cd14001
Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer ...
1-149 5.30e-08

Catalytic domain of the Dual-specificity protein kinase, Lymphokine-activated killer T-cell-originated protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TOPK, also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX. It contributes to cancer development and progression by downregulating the function of tumor suppressor p53 and reducing cell-cycle regulatory proteins. TOPK is found highly expressed in breast and skin cancer cells. The TOPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270903 [Multi-domain]  Cd Length: 292  Bit Score: 55.87  E-value: 5.30e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQ--LGDLKRylraQRPPEGMSPeLPPRdlrTLQRMGLEIARGLAHLHSHNYV-HSDLALRNCLLTSDL-TVRIGDY 76
Cdd:cd14001     85 MEYGGksLNDLIE----ERYEAGLGP-FPAA---TILKVALSIARALEYLHNEKKIlHGDIKSGNVLIKGDFeSVKLCDF 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   77 GLA---------HSNyKEDYYLTPErlwvplRWAAPELLGElhGSFVlvdqSRESNVWSLGVTLWELFEFGAqPYRHLSD 147
Cdd:cd14001    157 GVSlpltenlevDSD-PKAQYVGTE------PWKAKEALEE--GGVI----TDKADIFAYGLVLWEMMTLSV-PHLNLLD 222

                   ..
gi 1720423198  148 EE 149
Cdd:cd14001    223 IE 224
STKc_TEY_MAPK cd07858
Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; ...
40-134 5.42e-08

Catalytic domain of the Serine/Threonine Kinases, Plant TEY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype of plant MAPKs and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143363 [Multi-domain]  Cd Length: 337  Bit Score: 56.22  E-value: 5.42e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPerlWVPLRW-AAPELLgeLHGSfvlvDQ 118
Cdd:cd07858    116 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTE---YVVTRWyRAPELL--LNCS----EY 186
                           90
                   ....*....|....*.
gi 1720423198  119 SRESNVWSLGVTLWEL 134
Cdd:cd07858    187 TTAIDVWSVGCIFAEL 202
STKc_PASK cd14004
Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs ...
40-195 5.84e-08

Catalytic domain of the Serine/Threonine kinase, Per-ARNT-Sim (PAS) domain Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PASK (or PASKIN) is a nutrient and energy sensor and thus, plays an important role in maintaining cellular energy homeostasis. It coordinates the utilization of glucose in response to metabolic demand. It contains an N-terminal PAS domain which directly interacts and inhibits a C-terminal catalytic kinase domain. The PAS domain serves as a sensory module for different environmental signals such as light, redox state, and various metabolites. Binding of ligands to the PAS domain causes structural changes which leads to kinase activation and the phosphorylation of substrates to trigger the appropriate cellular response. The PASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270906 [Multi-domain]  Cd Length: 256  Bit Score: 55.47  E-value: 5.84e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHsnykedyYLTPERLWV---PLRWAAPELL-GELHGsfvl 115
Cdd:cd14004    117 QVADAVKHLHDQGIVHRDIKDENVILDGNGTIKLIDFGSAA-------YIKSGPFDTfvgTIDYAAPEVLrGNPYG---- 185
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  116 vdqSRESNVWSLGVTLWELFeFGAQPYRHLsdEEVLAfvvrqqhvklarPRLKLPYA--DYWYDILQSCWRP-PAQRPSA 192
Cdd:cd14004    186 ---GKEQDIWALGVLLYTLV-FKENPFYNI--EEILE------------ADLRIPYAvsEDLIDLISRMLNRdVGDRPTI 247

                   ...
gi 1720423198  193 SDL 195
Cdd:cd14004    248 EEL 250
STKc_MAP4K3_like cd06613
Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like ...
40-195 6.61e-08

Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase (MAP4K) 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270788 [Multi-domain]  Cd Length: 259  Bit Score: 55.00  E-value: 6.61e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA----HSNYKEDYYL-TPerlwvplRWAAPELLG-ELHGSF 113
Cdd:cd06613    105 ETLKGLAYLHSTGKIHRDIKGANILLTEDGDVKLADFGVSaqltATIAKRKSFIgTP-------YWMAPEVAAvERKGGY 177
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  114 vlvDQsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKlarPRL--KLPYADYWYDILQSCW-RPPAQRP 190
Cdd:cd06613    178 ---DG--KCDIWALGITAIELAE-LQPPMFDLHPMRALFLIPKSNFDP---PKLkdKEKWSPDFHDFIKKCLtKNPKKRP 248

                   ....*
gi 1720423198  191 SASDL 195
Cdd:cd06613    249 TATKL 253
STKc_MAPK15-like cd07852
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and ...
43-135 6.80e-08

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 and similar MAPKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270841 [Multi-domain]  Cd Length: 337  Bit Score: 56.03  E-value: 6.80e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   43 RGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERL--WVPLRW-AAPE-LLGELHGSFVlVDq 118
Cdd:cd07852    118 KALKYLHSGGVIHRDLKPSNILLNSDCRVKLADFGLARSLSQLEEDDENPVLtdYVATRWyRAPEiLLGSTRYTKG-VD- 195
                           90
                   ....*....|....*..
gi 1720423198  119 sresnVWSLGVTLWELF 135
Cdd:cd07852    196 -----MWSVGCILGEML 207
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
40-195 7.29e-08

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 55.10  E-value: 7.29e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL----TPerlwvplRWAAPELLGELHGSFVL 115
Cdd:cd06632    110 QILSGLAYLHSRNTVHRDIKGANILVDTNGVVKLADFGMAKHVEAFSFAKsfkgSP-------YWMAPEVIMQKNSGYGL 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  116 vdqsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLPYADYwydILQSCWRPPAQRPSASDL 195
Cdd:cd06632    183 -----AVDIWSLGCTVLEMAT-GKPPWSQYEGVAAIFKIGNSGELPPIPDHLSPDAKDF---IRLCLQRDPEDRPTASQL 253
STKc_PLK3 cd14189
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the ...
40-191 9.51e-08

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK3, also called Prk or Fnk (FGF-inducible kinase), regulates angiogenesis and responses to DNA damage. Activated PLK3 mediates Chk2 phosphorylation by ATM and the resulting checkpoint activation. PLK3 phosphorylates DNA polymerase delta and may be involved in DNA repair. It also inhibits Cdc25c, thereby regulating the onset of mitosis. The PLK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271091 [Multi-domain]  Cd Length: 255  Bit Score: 54.55  E-value: 9.51e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH-----SNYKEDYYLTPERLwvplrwaAPE-LLGELHGSf 113
Cdd:cd14189    109 QIISGLKYLHLKGILHRDLKLGNFFINENMELKVGDFGLAArleppEQRKKTICGTPNYL-------APEvLLRQGHGP- 180
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198  114 vlvdqsrESNVWSLGVTLWELFeFGAQPYRHLSDEEVLAFVvrqQHVKLARPR-LKLPYADYWYDILQscwRPPAQRPS 191
Cdd:cd14189    181 -------ESDVWSLGCVMYTLL-CGNPPFETLDLKETYRCI---KQVKYTLPAsLSLPARHLLAGILK---RNPGDRLT 245
PKc_LIMK_like cd14065
Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of ...
37-151 9.71e-08

Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. Members of this subfamily include LIMK, Testicular or testis-specific protein kinase (TESK), and similar proteins. LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270967 [Multi-domain]  Cd Length: 252  Bit Score: 54.42  E-value: 9.71e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   37 MGLEIARGLAHLHSHNYVHSDLALRNCLL---TSDLTVRIGDYGLAHS--NYKEDYYLTPERLWV---PLrWAAPELL-G 107
Cdd:cd14065     94 LAKDIASGMAYLHSKNIIHRDLNSKNCLVreaNRGRNAVVADFGLAREmpDEKTKKPDRKKRLTVvgsPY-WMAPEMLrG 172
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  108 ELHgsfvlvdqSRESNVWSLGVTLWELFEfgaqpyRHLSDEEVL 151
Cdd:cd14065    173 ESY--------DEKVDVFSFGIVLCEIIG------RVPADPDYL 202
STKc_YSK4 cd06631
Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs ...
40-196 1.10e-07

Catalytic domain of the Serine/Threonine Kinase, Yeast Sps1/Ste20-related Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270801 [Multi-domain]  Cd Length: 266  Bit Score: 54.75  E-value: 1.10e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----------HSNYKEDYYLTPerlwvplRWAAPELLGE 108
Cdd:cd06631    111 QILEGVAYLHNNNVIHRDIKGNNIMLMPNGVIKLIDFGCAkrlcinlssgsQSQLLKSMRGTP-------YWMAPEVINE 183
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  109 L-HGsfvlvdqsRESNVWSLGVTLWELFEfGAQPYRHLSdeEVLAFVVRQQHVKLArPRLKLPYADYWYDILQSCW-RPP 186
Cdd:cd06631    184 TgHG--------RKSDIWSIGCTVFEMAT-GKPPWADMN--PMAAIFAIGSGRKPV-PRLPDKFSPEARDFVHACLtRDQ 251
                          170
                   ....*....|
gi 1720423198  187 AQRPSASDLQ 196
Cdd:cd06631    252 DERPSAEQLL 261
STKc_PKA_like cd05580
Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs ...
1-134 1.13e-07

Catalytic subunit of the Serine/Threonine Kinases, cAMP-dependent protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the cAMP-dependent protein kinases, PKA and PRKX, and similar proteins. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. PRKX is also reulated by the R subunit and is is present in many tissues including fetal and adult brain, kidney, and lung. It is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PKA-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270732 [Multi-domain]  Cd Length: 290  Bit Score: 54.89  E-value: 1.13e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLR-AQRPPEGmspelpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd05580     80 MEYVPGGELFSLLRrSGRFPND-----------VAKFYAAEVVLALEYLHSLDIVYRDLKPENLLLDSDGHIKITDFGFA 148
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198   80 HSNYKEDYYL--TPERLwvplrwaAPE-LLGELHGSfvLVDqsresnVWSLGVTLWEL 134
Cdd:cd05580    149 KRVKDRTYTLcgTPEYL-------APEiILSKGHGK--AVD------WWALGILIYEM 191
STKc_myosinIIIA_N cd06638
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze ...
40-195 1.15e-07

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIA myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132969 [Multi-domain]  Cd Length: 286  Bit Score: 54.63  E-value: 1.15e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPERL------WVPLrWAAPELLG---ELH 110
Cdd:cd06638    132 EALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQ-------LTSTRLrrntsvGTPF-WMAPEVIAceqQLD 203
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  111 GSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLklpYADYWYDILQSCW-RPPAQR 189
Cdd:cd06638    204 STY-----DARCDVWSLGITAIELGD-GDPPLADLHPMRALFKIPRNPPPTLHQPEL---WSNEFNDFIRKCLtKDYEKR 274

                   ....*.
gi 1720423198  190 PSASDL 195
Cdd:cd06638    275 PTVSDL 280
STKc_CDK9_like cd07840
Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs ...
41-135 1.31e-07

Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270832 [Multi-domain]  Cd Length: 291  Bit Score: 54.49  E-value: 1.31e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS-NYKEDYYLTPE--RLWvplrWAAPELL-GElhgsfvlV 116
Cdd:cd07840    113 LLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPyTKENNADYTNRviTLW----YRPPELLlGA-------T 181
                           90
                   ....*....|....*....
gi 1720423198  117 DQSRESNVWSLGVTLWELF 135
Cdd:cd07840    182 RYGPEVDMWSVGCILAELF 200
STKc_nPKC_theta cd05619
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze ...
40-156 1.58e-07

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C theta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270770 [Multi-domain]  Cd Length: 331  Bit Score: 54.93  E-value: 1.58e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPErlwvplrWAAPE-LLGELHGSF 113
Cdd:cd05619    114 EIICGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDaktstFCGTPD-------YIAPEiLLGQKYNTS 186
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  114 VlvdqsresNVWSLGVTLWELFeFGAQPYrHLSDEEVLAFVVR 156
Cdd:cd05619    187 V--------DWWSFGVLLYEML-IGQSPF-HGQDEEELFQSIR 219
STK_BAK1_like cd14664
Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; ...
2-134 1.77e-07

Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes three leucine-rich repeat receptor-like kinases (LRR-RLKs): Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1), and Physcomitrella patens CLL1B clavata1-like receptor S/T protein kinase. BAK1 functions in various signaling pathways. It plays a role in BR (brassinosteroid)-regulated plant development as a co-receptor of BRASSINOSTEROID (BR) INSENSITIVE 1 (BRI1), the receptor for BRs, and is required for full activation of BR signaling. It also modulates pathways involved in plant resistance to pathogen infection (pattern-triggered immunity, PTI) and herbivore attack (wound- or herbivore feeding-induced accumulation of jasmonic acid (JA) and JA-isoleucine. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The STK_BAK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271134 [Multi-domain]  Cd Length: 270  Bit Score: 54.04  E-value: 1.77e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqRPPEGmspelPPRDLRTLQRMGLEIARGLAHLHSH---NYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd14664     70 EYMPNGSLGELLHS-RPESQ-----PPLDWETRQRIALGSARGLAYLHHDcspLIIHRDVKSNNILLDEEFEAHVADFGL 143
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   79 AH-SNYKEDYYLTPERlwVPLRWAAPELLGELHGsfvlvdqSRESNVWSLGVTLWEL 134
Cdd:cd14664    144 AKlMDDKDSHVMSSVA--GSYGYIAPEYAYTGKV-------SEKSDVYSYGVVLLEL 191
STKc_Bck1_like cd06629
Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein ...
40-195 1.93e-07

Catalytic domain of the Serine/Threonine Kinases, fungal Bck1-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The Bck1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270799 [Multi-domain]  Cd Length: 270  Bit Score: 53.92  E-value: 1.93e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSNYKEDYYLTPERLWV--PLRWAAPELLGELHGSFvlvd 117
Cdd:cd06629    116 QILDGLAYLHSKGILHRDLKADNILVDLEGICKISDFGI--SKKSDDIYGNNGATSMqgSVFWMAPEVIHSQGQGY---- 189
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  118 qSRESNVWSLGVTLWELFEfGAQPYrhlSDEEVLAFVVRQQHVKLARP---RLKL-PYADywyDILQSCWR-PPAQRPSA 192
Cdd:cd06629    190 -SAKVDIWSLGCVVLEMLA-GRRPW---SDDEAIAAMFKLGNKRSAPPvpeDVNLsPEAL---DFLNACFAiDPRDRPTA 261

                   ...
gi 1720423198  193 SDL 195
Cdd:cd06629    262 AEL 264
STKc_Nek2 cd08217
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
1-202 2.22e-07

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Nek2 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. It The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270857 [Multi-domain]  Cd Length: 265  Bit Score: 53.70  E-value: 2.22e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNY-----VHSDLALRNCLLTSDLTVRIGD 75
Cdd:cd08217     80 MEYCEGGDLAQLIKKCKKENQYIPE------EFIWKIFTQLLLALYECHNRSVgggkiLHRDLKPANIFLDSDNNVKLGD 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGL----------AHSNYKEDYYLTPErlwvplrwaapellgelhgsfVLVDQS--RESNVWSLGVTLWELFEFgaQPYR 143
Cdd:cd08217    154 FGLarvlshdssfAKTYVGTPYYMSPE---------------------LLNEQSydEKSDIWSLGCLIYELCAL--HPPF 210
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  144 HLSDEEVLAFVVRQQHVklarPRLKLPYADYWYDILQSCWR-PPAQRPSASDLqLQLTYL 202
Cdd:cd08217    211 QAANQLELAKKIKEGKF----PRIPSRYSSELNEVIKSMLNvDPDKRPSVEEL-LQLPLI 265
STKc_CDK10 cd07845
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs ...
1-135 2.23e-07

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173742 [Multi-domain]  Cd Length: 309  Bit Score: 54.30  E-value: 2.23e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlGDLKRYLraqrppEGMSPELPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07845     87 MEYCE-QDLASLL------DNMPTPFSESQVKCLM---LQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   81 SNYKEDYYLTPERlwVPLRWAAPELLgelhgsFVLVDQSRESNVWSLGVTLWELF 135
Cdd:cd07845    157 TYGLPAKPMTPKV--VTLWYRAPELL------LGCTTYTTAIDMWAVGCILAELL 203
STKc_ULK2 cd14201
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the ...
1-180 2.42e-07

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK2 is ubiquitously expressed and is essential in autophagy induction. It displays partially redundant functions with ULK1 and is able to compensate for the loss of ULK1 in non-selective autophagy. It also displays neuron-specific functions and is important in axon development. The ULK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271103 [Multi-domain]  Cd Length: 271  Bit Score: 53.47  E-value: 2.42e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppeGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT---------SDLTV 71
Cdd:cd14201     84 MEYCNGGDLADYLQAK----GTLSE------DTIRVFLQQIAAAMRILHSKGIIHRDLKPQNILLSyasrkkssvSGIRI 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLAHsnYKEDYYLTPERLWVPLrWAAPELLGELHgsfvlvdQSRESNVWSLGVTLWELFeFGAQPYRHLSDEEVL 151
Cdd:cd14201    154 KIADFGFAR--YLQSNMMAATLCGSPM-YMAPEVIMSQH-------YDAKADLWSIGTVIYQCL-VGKPPFQANSPQDLR 222
                          170       180       190
                   ....*....|....*....|....*....|
gi 1720423198  152 AFVVRQQHVKLARPRLKLPY-ADYWYDILQ 180
Cdd:cd14201    223 MFYEKNKNLQPSIPRETSPYlADLLLGLLQ 252
STKc_NIM1 cd14075
Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the ...
40-143 2.68e-07

Catalytic domain of the Serine/Threonine Kinase, NIM1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NIM1 is a widely-expressed kinase belonging to the AMP-activated protein kinase (AMPK) subfamily. Although present in most tissues, NIM1 kinase activity is only observed in the brain and testis. NIM1 is capable of autophosphorylating and activating itself, but may be present in other tissues in the inactive form. The physiological function of NIM1 has yet to be elucidated. The NIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270977 [Multi-domain]  Cd Length: 255  Bit Score: 53.11  E-value: 2.68e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLT-----PerlwvplrWAAPELLGELHGSFV 114
Cdd:cd14075    109 QIVSAVKHMHENNIIHRDLKAENVFYASNNCVKVGDFGFSTHAKRGETLNTfcgspP--------YAAPELFKDEHYIGI 180
                           90       100       110
                   ....*....|....*....|....*....|..
gi 1720423198  115 LVDqsresnVWSLGVTLWelfeF---GAQPYR 143
Cdd:cd14075    181 YVD------IWALGVLLY----FmvtGVMPFR 202
STKc_IRAK cd14066
Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases ...
2-195 3.11e-07

Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. Some IRAKs may also play roles in T- and B-cell signaling, and adaptive immunity. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK-1, -2, and -4 are ubiquitously expressed and are active kinases, while IRAK-M is only induced in monocytes and macrophages and is an inactive kinase. Variations in IRAK genes are linked to diverse diseases including infection, sepsis, cancer, and autoimmune diseases. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain (a pseudokinase domain in the case of IRAK3), and a C-terminal domain; IRAK-4 lacks the C-terminal domain. This subfamily includes plant receptor-like kinases (RLKs) including Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1). BAK1 functions in BR (brassinosteroid)-regulated plant development and in pathways involved in plant resistance to pathogen infection and herbivore attack. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The IRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270968 [Multi-domain]  Cd Length: 272  Bit Score: 53.43  E-value: 3.11e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRMGLEIARGLAHLHSHNY---VHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd14066     70 EYMPNGSLEDRLHCHKG-------SPPLPWPQRLKIAKGIARGLEYLHEECPppiIHGDIKSSNILLDEDFEPKLTDFGL 142
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AH-SNYKEDY-----------YLTPERLWVplrwaapellGELhgsfvlvdqSRESNVWSLGVTLWELFEfGAQPYRHLS 146
Cdd:cd14066    143 ARlIPPSESVsktsavkgtigYLAPEYIRT----------GRV---------STKSDVYSFGVVLLELLT-GKPAVDENR 202
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  147 DE-------EVLAFVVRQQHVKLARPRLKLPYADYWYDILQ------SCWR-PPAQRPSASDL 195
Cdd:cd14066    203 ENasrkdlvEWVESKGKEELEDILDKRLVDDDGVEEEEVEAllrlalLCTRsDPSLRPSMKEV 265
STKc_PKB cd05571
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer ...
38-164 3.35e-07

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of phosphoinositide 3-kinase (PI3K) and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270723 [Multi-domain]  Cd Length: 322  Bit Score: 53.51  E-value: 3.35e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   38 GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnyKED---------YYLTPERLwvplrwaAPELLGE 108
Cdd:cd05571    101 GAEIVLALGYLHSQGIVYRDLKLENLLLDKDGHIKITDFGLC----KEEisygattktFCGTPEYL-------APEVLED 169
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198  109 lhgsfvlVDQSRESNVWSLGVTLWELFeFGAQP-YRHlsDEEVLAFVVRQQHVKLAR 164
Cdd:cd05571    170 -------NDYGRAVDWWGLGVVMYEMM-CGRLPfYNR--DHEVLFELILMEEVRFPS 216
STKc_PAK_II cd06648
Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze ...
39-195 3.54e-07

Catalytic domain of the Serine/Threonine Kinase, Group II p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270815 [Multi-domain]  Cd Length: 261  Bit Score: 52.83  E-value: 3.54e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyylTPER---LWVPLrWAAPELLG-ELHGSfv 114
Cdd:cd06648    110 RAVLKALSFLHSQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----VPRRkslVGTPY-WMAPEVISrLPYGT-- 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFE-----FGAQPY---RHLSDEEvlafVVRQQHVKLARPRLKlpyadywyDILQSCW-RP 185
Cdd:cd06648    183 ------EVDIWSLGIMVIEMVDgeppyFNEPPLqamKRIRDNE----PPKLKNLHKVSPRLR--------SFLDRMLvRD 244
                          170
                   ....*....|
gi 1720423198  186 PAQRPSASDL 195
Cdd:cd06648    245 PAQRATAAEL 254
STKc_nPKC_delta cd05620
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze ...
1-157 3.61e-07

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C delta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-delta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173710 [Multi-domain]  Cd Length: 316  Bit Score: 53.41  E-value: 3.61e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppegmspELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05620     75 MEFLNGGDLMFHIQ----------DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCK 144
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKED-----YYLTPErlwvplrWAAPELLGELHGSFVLvdqsresNVWSLGVTLWELFeFGAQPYrHLSDEEVLAFVV 155
Cdd:cd05620    145 ENVFGDnrastFCGTPD-------YIAPEILQGLKYTFSV-------DWWSFGVLLYEML-IGQSPF-HGDDEDELFESI 208

                   ..
gi 1720423198  156 RQ 157
Cdd:cd05620    209 RV 210
STKc_LIMK cd14154
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer ...
2-134 3.73e-07

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. Vertebrate have two members, LIMK1 and LIMK2. The LIMK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271056 [Multi-domain]  Cd Length: 272  Bit Score: 52.90  E-value: 3.73e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAqrppegMSPELPprdlrTLQRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14154     70 EYIPGGTLKDVLKD------MARPLP-----WAQRVRFakDIASGMAYLHSMNIIHRDLNSHNCLVREDKTVVVADFGLA 138
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720423198   80 HSNYKEDYYLTPERLWVPLR------------------WAAPELLGELhgsfvlvDQSRESNVWSLGVTLWEL 134
Cdd:cd14154    139 RLIVEERLPSGNMSPSETLRhlkspdrkkrytvvgnpyWMAPEMLNGR-------SYDEKVDIFSFGIVLCEI 204
STKc_LIMK2 cd14222
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the ...
2-134 3.73e-07

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK2 activation is induced by transforming growth factor-beta l (TGFb-l) and shares the same subcellular location as the cofilin family member twinfilin, which may be its biological substrate. LIMK2 plays a role in spermatogenesis, and may contribute to tumor progression and metastasis formation in some cancer cells. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271124 [Multi-domain]  Cd Length: 272  Bit Score: 53.02  E-value: 3.73e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPegmspelpPRDLRTlqRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd14222     70 EFIEGGTLKDFLRADDPF--------PWQQKV--SFAKGIASGMAYLHSMSIIHRDLNSHNCLIKLDKTVVVADFGLSRL 139
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   82 NYKEDYYLTPERLWVPLR------------------WAAPELlgeLHGSfvlvDQSRESNVWSLGVTLWEL 134
Cdd:cd14222    140 IVEEKKKPPPDKPTTKKRtlrkndrkkrytvvgnpyWMAPEM---LNGK----SYDEKVDIFSFGIVLCEI 203
STKc_ULK1 cd14202
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the ...
1-166 3.88e-07

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. It associates with three autophagy-related proteins (Atg13, FIP200 amd Atg101) to form the ULK1 complex. All fours proteins are essential for autophagosome formation. ULK1 is regulated by both mammalian target-of rapamycin complex 1 (mTORC1) and AMP-activated protein kinase (AMPK). mTORC1 negatively regulates the ULK1 complex in a nutrient-dependent manner while AMPK stimulates autophagy by inhibiting mTORC1. ULK1 also plays neuron-specific roles and is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, neurite extension, and axon branching. The ULK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271104 [Multi-domain]  Cd Length: 267  Bit Score: 53.09  E-value: 3.88e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLT---------SDLTV 71
Cdd:cd14202     80 MEYCNGGDLADYLHTMR-------TLSEDTIRLFLQ---QIAGAMKMLHSKGIIHRDLKPQNILLSysggrksnpNNIRI 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLAHsnYKEDYYLTPERLWVPLrWAAPELLGELHgsfvlvdQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVL 151
Cdd:cd14202    150 KIADFGFAR--YLQNNMMAATLCGSPM-YMAPEVIMSQH-------YDAKADLWSIGTIIYQCLT-GKAPFQASSPQDLR 218
                          170
                   ....*....|....*
gi 1720423198  152 AFVVRQQHVKLARPR 166
Cdd:cd14202    219 LFYEKNKSLSPNIPR 233
STKc_NUAK2 cd14161
Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs ...
1-142 4.79e-07

Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NUAK proteins are classified as AMP-activated protein kinase (AMPK)-related kinases, which like AMPK are activated by the major tumor suppressor LKB1. Vertebrates contain two NUAK proteins, called NUAK1 and NUAK2. NUAK2, also called SNARK (Sucrose, non-fermenting 1/AMP-activated protein kinase-related kinase), is involved in energy metabolism. It is activated by hyperosmotic stress, DNA damage, and nutrients such as glucose and glutamine. NUAK2-knockout mice develop obesity, altered serum lipid profiles, hyperinsulinaemia, hyperglycaemia, and impaired glucose tolerance. NUAK2 is implicated in regulating actin stress fiber assembly through its association with myosin phosphatase Rho-interacting protein (MRIP), which leads to an increase in myosin regulatory light chain (MLC) phosphorylation. It is also associated with tumor growth, migration, and oncogenicity of melanoma cells. The NUAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271063 [Multi-domain]  Cd Length: 255  Bit Score: 52.65  E-value: 4.79e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLah 80
Cdd:cd14161     81 MEYASRGDLYDYISERQR-------LSELEARHFFR---QIVSAVHYCHANGIVHRDLKLENILLDANGNIKIADFGL-- 148
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198   81 SN-YKEDYYLTpERLWVPLrWAAPELL-GELHgsfvlvdQSRESNVWSLGVTLWELFEfGAQPY 142
Cdd:cd14161    149 SNlYNQDKFLQ-TYCGSPL-YASPEIVnGRPY-------IGPEVDSWSLGVLLYILVH-GTMPF 202
PKc_TNNI3K cd14064
Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; ...
30-191 5.15e-07

Catalytic domain of the Dual-specificity protein kinase, TNNI3-interacting kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TNNI3K, also called cardiac ankyrin repeat kinase (CARK), is a cardiac-specific troponin I-interacting kinase that promotes cardiac myogenesis, improves cardiac performance, and protects the myocardium from ischemic injury. It contains N-terminal ankyrin repeats, a catalytic kinase domain, and a C-terminal serine-rich domain. TNNI3K exerts a disease-accelerating effect on cardiac dysfunction and reduced survival in mouse models of cardiomyopathy. The TNNI3K subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270966 [Multi-domain]  Cd Length: 254  Bit Score: 52.53  E-value: 5.15e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLH--SHNYVHSDLALRNCLLTSDLTVRIGDYG---LAHSNYKEDYYLTPERlwvpLRWAAPE 104
Cdd:cd14064     91 DLQSKLIIAVDVAKGMEYLHnlTQPIIHRDLNSHNILLYEDGHAVVADFGesrFLQSLDEDNMTKQPGN----LRWMAPE 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LLGElhgsfvLVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAfvvrQQHVKLARPRLKLPYADYWYDILQSCWR 184
Cdd:cd14064    167 VFTQ------CTRYSIKADVFSYALCLWELLT-GEIPFAHLKPAAAAA----DMAYHHIRPPIGYSIPKPISSLLMRGWN 235

                   ....*...
gi 1720423198  185 P-PAQRPS 191
Cdd:cd14064    236 AePESRPS 243
STKc_MPK1 cd07857
Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; ...
40-141 5.18e-07

Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. MAPKs are important mediators of cellular responses to extracellular signals. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173750 [Multi-domain]  Cd Length: 332  Bit Score: 53.18  E-value: 5.18e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA---HSNYKE-DYYLTPerlWVPLRW-AAPELLGELHGSFV 114
Cdd:cd07857    113 QILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLArgfSENPGEnAGFMTE---YVATRWyRAPEIMLSFQSYTK 189
                           90       100
                   ....*....|....*....|....*..
gi 1720423198  115 LVDqsresnVWSLGVTLWELfeFGAQP 141
Cdd:cd07857    190 AID------VWSVGCILAEL--LGRKP 208
STKc_MELK cd14078
Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; ...
1-134 5.26e-07

Catalytic domain of the Serine/Threonine Kinase, Maternal Embryonic Leucine zipper Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MELK is a cell cycle dependent protein which functions in cytokinesis, cell cycle, apoptosis, cell proliferation, and mRNA processing. It is found upregulated in many types of cancer cells, playing an indispensable role in cancer cell survival. It makes an attractive target in the design of inhibitors for use in the treatment of a wide range of human cancer. The MELK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270980 [Multi-domain]  Cd Length: 257  Bit Score: 52.39  E-value: 5.26e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-A 79
Cdd:cd14078     80 LEYCPGGELFDYIVAKD-------RLSEDEARVFFR---QIVSAVAYVHSQGYAHRDLKPENLLLDEDQNLKLIDFGLcA 149
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720423198   80 HSNYKEDYYL-----TPErlwvplrWAAPELL--GELHGSfvlvdqsrESNVWSLGVTLWEL 134
Cdd:cd14078    150 KPKGGMDHHLetccgSPA-------YAAPELIqgKPYIGS--------EADVWSMGVLLYAL 196
STKc_EIF2AK4_GCN2_rpt2 cd14046
Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation ...
1-82 5.65e-07

Catalytic domain, repeat 2, of the Serine/Threonine kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GCN2 (or EIF2AK4) is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. Its kinase domain is activated via conformational changes as a result of the binding of uncharged tRNA to the HisRS-like domain. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270948 [Multi-domain]  Cd Length: 278  Bit Score: 52.76  E-value: 5.65e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlgdlKRYLRaQRPPEGMspeLPPRDlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14046     83 MEYCE----KSTLR-DLIDSGL---FQDTD--RLWRLFRQILEGLAYIHSQGIIHRDLKPVNIFLDSNGNVKIGDFGLAT 152

                   ..
gi 1720423198   81 SN 82
Cdd:cd14046    153 SN 154
STKc_PKN cd05589
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer ...
44-150 5.79e-07

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270741 [Multi-domain]  Cd Length: 326  Bit Score: 53.07  E-value: 5.79e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-----AHSNYKEDYYLTPERLwvplrwaAPELLGElhgsfvlVDQ 118
Cdd:cd05589    113 GLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLckegmGFGDRTSTFCGTPEFL-------APEVLTD-------TSY 178
                           90       100       110
                   ....*....|....*....|....*....|..
gi 1720423198  119 SRESNVWSLGVTLWELFeFGAQPYRHLSDEEV 150
Cdd:cd05589    179 TRAVDWWGLGVLIYEML-VGESPFPGDDEEEV 209
STKc_CDK1_CdkB_like cd07835
Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of ...
2-128 6.04e-07

Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases and of Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK, CDK2, and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270829 [Multi-domain]  Cd Length: 283  Bit Score: 52.68  E-value: 6.04e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLgDLKRYLRAqrppegmSPELPpRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd07835     78 EFLDL-DLKKYMDS-------SPLTG-LDPPLIKSYLYQLLQGIAFCHSHRVLHRDLKPQNLLIDTEGALKLADFGLARA 148
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198   82 nykedyYLTPERLW----VPLRWAAPE-LLGELHGSfVLVDqsresnVWSLG 128
Cdd:cd07835    149 ------FGVPVRTYthevVTLWYRAPEiLLGSKHYS-TPVD------IWSVG 187
STKc_MAP4K5 cd06646
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
1-195 6.13e-07

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270813 [Multi-domain]  Cd Length: 268  Bit Score: 52.34  E-value: 6.13e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspelpprdLRTLQ--RMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd06646     85 MEYCGGGSLQDIYHVTGP------------LSELQiaYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGV 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHS-----NYKEDYYLTPerlwvplRWAAPELLG-ELHGSFvlvdqSRESNVWSLGVTLWELFE-----FGAQPYRHLsd 147
Cdd:cd06646    153 AAKitatiAKRKSFIGTP-------YWMAPEVAAvEKNGGY-----NQLCDIWAVGITAIELAElqppmFDLHPMRAL-- 218
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  148 eevlaFVVRQQHVKLARPRLKLPYADYWYDILQ-SCWRPPAQRPSASDL 195
Cdd:cd06646    219 -----FLMSKSNFQPPKLKDKTKWSSTFHNFVKiSLTKNPKKRPTAERL 262
STKc_CaMKK2 cd14199
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; ...
40-170 6.21e-07

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK2, also called CaMKK beta, is one of the most versatile CaMKs. It is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. CaMKK2 contains unique N- and C-terminal domains and a central catalytic kinase domain that is followed by a regulatory domain that bears overlapping autoinhibitory and CaM-binding regions. It can be activated by signaling through G-coupled receptors, IP3 receptors, plasma membrane ion channels, and Toll-like receptors. Thus, CaMKK2 acts as a molecular hub that is capable of receiving and decoding signals from diverse pathways. The CaMKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271101 [Multi-domain]  Cd Length: 286  Bit Score: 52.66  E-value: 6.21e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTpERLWVPlRWAAPELLGELHGSFVLvdqs 119
Cdd:cd14199    134 DLIKGIEYLHYQKIIHRDVKPSNLLVGEDGHIKIADFGVSNEFEGSDALLT-NTVGTP-AFMAPETLSETRKIFSG---- 207
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  120 RESNVWSLGVTLWeLFEFGAQPYRhlsDEEVLAFvvrqqHVKLARPRLKLP 170
Cdd:cd14199    208 KALDVWAMGVTLY-CFVFGQCPFM---DERILSL-----HSKIKTQPLEFP 249
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
28-195 6.43e-07

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 52.36  E-value: 6.43e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   28 PRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsNYKEDYYLTPERLWVPLRWAAPELLG 107
Cdd:cd06640     97 PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQ 174
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  108 ElhgsfvlVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVvrqqhVKLARPRLKLPYADYWYDILQSCW-RPP 186
Cdd:cd06640    175 Q-------SAYDSKADIWSLGITAIELAK-GEPPNSDMHPMRVLFLI-----PKNNPPTLVGDFSKPFKEFIDACLnKDP 241

                   ....*....
gi 1720423198  187 AQRPSASDL 195
Cdd:cd06640    242 SFRPTAKEL 250
PKc_Byr1_like cd06620
Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; ...
1-195 6.49e-07

Catalytic domain of fungal Byr1-like dual-specificity Mitogen-activated protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKK kinase Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The Byr-1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270792 [Multi-domain]  Cd Length: 286  Bit Score: 52.44  E-value: 6.49e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLkrylraqrppEGMSPELPPRDLRTLQRMGLEIARGLAHLHS-HNYVHSDLALRNCLLTSDLTVRIGDYG-- 77
Cdd:cd06620     83 MEYMDCGSL----------DKILKKKGPFPEEVLGKIAVAVLEGLTYLYNvHRIIHRDIKPSNILVNSKGQIKLCDFGvs 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ------LAHSNYKEDYYLTPERLWvplrwaapellGElhgsfvlvDQSRESNVWSLGVTLWEL----FEFGAQP---YRH 144
Cdd:cd06620    153 gelinsIADTFVGTSTYMSPERIQ-----------GG--------KYSVKSDVWSLGLSIIELalgeFPFAGSNdddDGY 213
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  145 LSDEEVLAFVvrQQHVKLARPRL--KLPYADYWYDILQSCW-RPPAQRPSASDL 195
Cdd:cd06620    214 NGPMGILDLL--QRIVNEPPPRLpkDRIFPKDLRDFVDRCLlKDPRERPSPQLL 265
STKc_Nek4 cd08223
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
1-134 6.66e-07

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek4 is highly abundant in the testis. Its specific function is unknown. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270862 [Multi-domain]  Cd Length: 257  Bit Score: 52.05  E-value: 6.66e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppeGMspelpPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd08223     79 MGFCEGGDLYTRLKEQK---GV-----LLEERQVVEWFVQIAMALQYMHERNILHRDLKTQNIFLTKSNIIKVGDLGIAr 150
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   80 ----HSNYKEDYYLTPerlwvplRWAAPELlgelhgsFVLVDQSRESNVWSLGVTLWEL 134
Cdd:cd08223    151 vlesSSDMATTLIGTP-------YYMSPEL-------FSNKPYNHKSDVWALGCCVYEM 195
STKc_STK36 cd14002
Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the ...
1-142 7.16e-07

Catalytic domain of Serine/Threonine Kinase 36; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK36, also called Fused (or Fu) kinase, is involved in the Hedgehog signaling pathway. It is activated by the Smoothened (SMO) signal transducer, resulting in the stabilization of GLI transcription factors and the phosphorylation of SUFU to facilitate the nuclear accumulation of GLI. In Drosophila, Fused kinase is maternally required for proper segmentation during embryonic development and for the development of legs and wings during the larval stage. In mice, STK36 is not necessary for embryonic development, although mice deficient in STK36 display growth retardation postnatally. The STK36 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270904 [Multi-domain]  Cd Length: 253  Bit Score: 51.87  E-value: 7.16e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlGDLKRYLRAqrppEGMSPELPprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14002     79 TEYAQ-GELFQILED----DGTLPEEE------VRSIAKQLVSALHYLHSNRIIHRDMKPQNILIGKGGVVKLCDFGFAR 147
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198   81 SNYKEDYYLTPERlWVPLrWAAPELLGElhgsfvlvdQ--SRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14002    148 AMSCNTLVLTSIK-GTPL-YMAPELVQE---------QpyDHTADLWSLGCILYELF-VGQPPF 199
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
40-156 7.88e-07

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 52.10  E-value: 7.88e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNY----KEDYYLTPERLwvplrwaAPE-LLGelhgsfv 114
Cdd:cd05611    105 EVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLekrhNKKFVGTPDYL-------APEtILG------- 170
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 1720423198  115 lVDQSRESNVWSLGVTLWElFEFGAQPYRHLSDEEVLAFVVR 156
Cdd:cd05611    171 -VGDDKMSDWWSLGCVIFE-FLFGYPPFHAETPDAVFDNILS 210
STKc_CAMKK cd14118
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; ...
40-161 8.97e-07

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). Vertebrates contain two CaMKKs, CaMKK1 (or alpha) and CaMKK2 (or beta). CaMKK1 is involved in the regulation of glucose uptake in skeletal muscles. CaMKK2 is involved in regulating energy balance, glucose metabolism, adiposity, hematopoiesis, inflammation, and cancer. The CaMKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271020 [Multi-domain]  Cd Length: 275  Bit Score: 51.98  E-value: 8.97e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL-----TPErlwvplrWAAPELLGELHGSFv 114
Cdd:cd14118    123 DIVLGIEYLHYQKIIHRDIKPSNLLLGDDGHVKIADFGVSNEFEGDDALLsstagTPA-------FMAPEALSESRKKF- 194
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  115 lvdQSRESNVWSLGVTLWeLFEFGAQPYrhlSDEEVLAF--VVRQQHVK 161
Cdd:cd14118    195 ---SGKALDIWAMGVTLY-CFVFGRCPF---EDDHILGLheKIKTDPVV 236
STKc_Nek7 cd08229
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
1-134 1.26e-06

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270866 [Multi-domain]  Cd Length: 292  Bit Score: 51.57  E-value: 1.26e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-- 78
Cdd:cd08229    103 LELADAGDLSRMIKHFKKQKRLIPE------KTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLgr 176
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198   79 --------AHSNYKEDYYLTPERlwvplrwaapelLGELHGSFvlvdqsrESNVWSLGVTLWEL 134
Cdd:cd08229    177 ffsskttaAHSLVGTPYYMSPER------------IHENGYNF-------KSDIWSLGCLLYEM 221
STKc_GAK cd14036
Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs ...
2-199 1.34e-06

Catalytic domain of the Serine/Threonine protein kinase, cyclin G-Associated Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GAK, also called auxilin-2, contains an N-terminal kinase domain that phosphorylates the mu subunits of adaptor protein (AP) 1 and AP2. In addition, it contains an auxilin-1-like domain structure consisting of PTEN-like, clathrin-binding, and J domains. Like auxilin-1, GAK facilitates Hsc70-mediated dissociation of clathrin from clathrin-coated vesicles. GAK is expressed ubiquitously and is enriched in the Golgi, unlike auxilin-1 which is nerve-specific. GAK also plays regulatory roles outside of clathrin-mediated membrane traffic including the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses through interaction with the interleukin 12 receptor. It also interacts with the androgen receptor, acting as a transcriptional coactivator, and its expression is significantly increased with the progression of prostate cancer. The GAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270938 [Multi-domain]  Cd Length: 282  Bit Score: 51.36  E-value: 1.34e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQlGDLKRYLRAQRPPEGMSPElpprdlrTLQRMGLEIARGLAHLHSHN--YVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14036     86 ELCK-GQLVDFVKKVEAPGPFSPD-------TVLKIFYQTCRAVQHMHKQSppIIHRDLKIENLLIGNQGQIKLCDFGSA 157
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HSNykedyYLTPERLWVPLR---------------WAAPELLgELHGSFVLvdqSRESNVWSLGVTLWeLFEFGAQPYRh 144
Cdd:cd14036    158 TTE-----AHYPDYSWSAQKrslvedeitrnttpmYRTPEMI-DLYSNYPI---GEKQDIWALGCILY-LLCFRKHPFE- 226
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198  145 lsDEEVLAFVvrqqHVKLARPRLKLPYADYwYDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd14036    227 --DGAKLRII----NAKYTIPPNDTQYTVF-HDLIRSTLKvNPEERLSITEIVEQL 275
STKc_TGFbR1_ACVR1b_ACVR1c cd14143
Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I ...
30-192 1.37e-06

Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta Type I Receptor and Activin Type IB/IC Receptors; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TGFbR1, also called Activin receptor-Like Kinase 5 (ALK5), functions as a receptor for TGFbeta and phoshorylates SMAD2/3. TGFbeta proteins are cytokines that regulate cell growth, differentiation, and survival, and are critical in the development and progression of many human cancers. Mutations in TGFbR1 (and TGFbR2) can cause aortic aneurysm disorders such as Loeys-Dietz and Marfan syndromes. ACVR1b (also called ALK4) and ACVR1c (also called ALK7) act as receptors for activin A and B, respectively. TGFbR1, ACVR1b, and ACVR1c belong to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like TGFbR1, ACVR1b, and ACVR1c, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The TGFbR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271045 [Multi-domain]  Cd Length: 288  Bit Score: 51.67  E-value: 1.37e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSH--------NYVHSDLALRNCLLTSDLTVRIGDYGLA--HSNYKEDYYLTPERLWVPLR 99
Cdd:cd14143     90 TVEGMIKLALSIASGLAHLHMEivgtqgkpAIAHRDLKSKNILVKKNGTCCIADLGLAvrHDSATDTIDIAPNHRVGTKR 169
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  100 WAAPELLGELHG--SFvlvDQSRESNVWSLGVTLWEL---------FEFGAQPYRHL-----SDEEVLAFVVRQqhvkla 163
Cdd:cd14143    170 YMAPEVLDDTINmkHF---ESFKRADIYALGLVFWEIarrcsiggiHEDYQLPYYDLvpsdpSIEEMRKVVCEQ------ 240
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  164 RPRLKLPyaDYWY---------DILQSCWRP-PAQRPSA 192
Cdd:cd14143    241 KLRPNIP--NRWQscealrvmaKIMRECWYAnGAARLTA 277
STKc_PRKX_like cd05612
Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of ...
1-143 1.58e-06

Catalytic domain of PRKX-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. The PRKX-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270763 [Multi-domain]  Cd Length: 292  Bit Score: 51.28  E-value: 1.58e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspelpprdlRTLQRMGL----EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDY 76
Cdd:cd05612     80 MEYVPGGELFSYLRNSG--------------RFSNSTGLfyasEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDF 145
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   77 GLAHSNYKEDYYL--TPERLwvplrwaAPELLGEL-HGSFVlvdqsresNVWSLGVTLWELFeFGAQPYR 143
Cdd:cd05612    146 GFAKKLRDRTWTLcgTPEYL-------APEVIQSKgHNKAV--------DWWALGILIYEML-VGYPPFF 199
STKc_SBK1 cd13987
Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the ...
1-131 1.85e-06

Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SBK1, also called BSK146, is predominantly expressed in the brain. Its expression is increased in the developing brain during the late embryonic stage, coinciding with dramatic neuronal proliferation, migration, and maturation. SBK1 may play an important role in regulating brain development. The SBK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270889 [Multi-domain]  Cd Length: 259  Bit Score: 50.79  E-value: 1.85e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLkrylRAQRPPEGMSPELpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLL-TSDLT-VRIGDYGL 78
Cdd:cd13987     70 QEYAPYGDL----FSIIPPQVGLPEE------RVKRCAAQLASALDFMHSKNLVHRDIKPENVLLfDKDCRrVKLCDFGL 139
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198   79 AHSNykedyYLTPERLWVPLRWAAPELL-GELHGSFVlVDQSreSNVWSLGVTL 131
Cdd:cd13987    140 TRRV-----GSTVKRVSGTIPYTAPEVCeAKKNEGFV-VDPS--IDVWAFGVLL 185
STKc_GRK1 cd05608
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs ...
40-143 1.98e-06

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270759 [Multi-domain]  Cd Length: 288  Bit Score: 51.04  E-value: 1.98e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----HSNYKEDYYLTPErlwvplrWAAPELL-GELHGSF 113
Cdd:cd05608    113 QIISGLEHLHQRRIIYRDLKPENVLLDDDGNVRISDLGLAvelkdGQTKTKGYAGTPG-------FMAPELLlGEEYDYS 185
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  114 VlvdqsresNVWSLGVTLWELFEfGAQPYR 143
Cdd:cd05608    186 V--------DYFTLGVTLYEMIA-ARGPFR 206
PTZ00267 PTZ00267
NIMA-related protein kinase; Provisional
1-155 2.03e-06

NIMA-related protein kinase; Provisional


Pssm-ID: 140293 [Multi-domain]  Cd Length: 478  Bit Score: 51.94  E-value: 2.03e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaQRPPEgmspELPPRDlrtlQRMGL---EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG 77
Cdd:PTZ00267   144 MEYGSGGDLNKQIK-QRLKE----HLPFQE----YEVGLlfyQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFG 214
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ------------LAHSNYKEDYYLTPErLWVPLRWaapellgelhgsfvlvdqSRESNVWSLGVTLWELFEFgAQPYRHL 145
Cdd:PTZ00267   215 fskqysdsvsldVASSFCGTPYYLAPE-LWERKRY------------------SKKADMWSLGVILYELLTL-HRPFKGP 274
                          170
                   ....*....|
gi 1720423198  146 SDEEVLAFVV 155
Cdd:PTZ00267   275 SQREIMQQVL 284
PK_GC-C cd14044
Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-C; The pseudokinase domain ...
1-204 2.11e-06

Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-C; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-C binds and is activated by the intestinal hormones, guanylin (GN) and uroguanylin (UGN), which are secreted after salty meals to inhibit sodium absorption and induce the secretion of chloride, bicarbonate, and water. GN and UGN are also present in the kidney, where they induce increased salt and water secretion. This prevents the development of hypernatremia and hypervolemia after ingestion of high amounts of salt. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-C subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270946 [Multi-domain]  Cd Length: 271  Bit Score: 50.65  E-value: 2.11e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppEGMS-PELPPRDLRTLQRMGLEIARGLAHLHSHNY-VHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd14044     82 IEYCERGSLRDVLN-----DKISyPDGTFMDWEFKISVMYDIAKGMSYLHSSKTeVHGRLKSTNCVVDSRMVVKITDFGC 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 ahsnykeDYYLTPERLWvplrWAAPELLGElhgsfvlVDQSRESNVWSLGVTLWELFEFGAQPY-RHLSD-EEVLAFVVR 156
Cdd:cd14044    157 -------NSILPPSKDL----WTAPEHLRQ-------AGTSQKGDVYSYGIIAQEIILRKETFYtAACSDrKEKIYRVQN 218
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  157 QQHVKLARPRLKLPYAD----YWYDILQSCW-RPPAQRPSASDLQLQLTYLLS 204
Cdd:cd14044    219 PKGMKPFRPDLNLESAGererEVYGLVKNCWeEDPEKRPDFKKIENTLAKIFS 271
STKc_HUNK cd14070
Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase ...
1-162 2.24e-06

Catalytic domain of the Serine/Threonine Kinase, Hormonally up-regulated Neu-associated kinase (also called MAK-V); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. HUNK/MAK-V was identified from a mammary tumor in an MMTV-neu transgenic mouse. It is required for the metastasis of c-myc-induced mammary tumors, but is not necessary for c-myc-induced primary tumor formation or normal development. It is required for HER2/neu-induced tumor formation and maintenance of the cells' tumorigenic phenotype. It is over-expressed in aggressive subsets of ovary, colon, and breast carcinomas. HUNK interacts with synaptopodin, and may also play a role in synaptic plasticity. The HUNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270972 [Multi-domain]  Cd Length: 262  Bit Score: 50.59  E-value: 2.24e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDL-KRYLRAQRPPEgmspelpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:cd14070     82 MELCPGGNLmHRIYDKKRLEE-----------REARRYIRQLVSAVEHLHRAGVVHRDLKIENLLLDENDNIKLIDFGLS 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 HS----NYKEDYYL---TPErlwvplrWAAPELLG-ELHGSFVlvdqsresNVWSLGVTLWELFEfGAQPYrhlsdeEVL 151
Cdd:cd14070    151 NCagilGYSDPFSTqcgSPA-------YAAPELLArKKYGPKV--------DVWSIGVNMYAMLT-GTLPF------TVE 208
                          170
                   ....*....|.
gi 1720423198  152 AFVVRQQHVKL 162
Cdd:cd14070    209 PFSLRALHQKM 219
STKc_GAK_like cd13985
Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of ...
1-200 2.39e-06

Catalytic domain of cyclin G-Associated Kinase-like proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes cyclin G-Associated Kinase (GAK), Drosophila melanogaster Numb-Associated Kinase (NAK)-like proteins, and similar protein kinases. GAK plays regulatory roles in clathrin-mediated membrane trafficking, the maintenance of centrosome integrity and chromosome congression, neural patterning, survival of neurons, and immune responses. NAK plays a role in asymmetric cell division through its association with Numb. It also regulates the localization of Dlg, a protein essential for septate junction formation. The GAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270887 [Multi-domain]  Cd Length: 272  Bit Score: 50.41  E-value: 2.39e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlGDLKRYLRaQRPPEGMSPElpprdlrTLQRMGLEIARGLAHLHSHN--YVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd13985     81 MEYCP-GSLVDILE-KSPPSPLSEE-------EVLRIFYQICQAVGHLHSQSppIIHRDIKIENILFSNTGRFKLCDFGS 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSNYKEDY--------------YLTPErlwvplrWAAPELLgELHGSFVLvdqSRESNVWSLGVTLWELFefgaqpYRH 144
Cdd:cd13985    152 ATTEHYPLEraeevniieeeiqkNTTPM-------YRAPEMI-DLYSKKPI---GEKADIWALGCLLYKLC------FFK 214
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  145 L--SDEEVLAFVVRqqhvklarpRLKLPYADYWYDILQSCWR-----PPAQRPSASDLQLQLT 200
Cdd:cd13985    215 LpfDESSKLAIVAG---------KYSIPEQPRYSPELHDLIRhmltpDPAERPDIFQVINIIT 268
STKc_Nek11 cd08222
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
2-202 2.40e-06

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 11; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. It is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270861 [Multi-domain]  Cd Length: 260  Bit Score: 50.50  E-value: 2.40e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEGMSPElpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLtVRIGDYG---- 77
Cdd:cd08222     82 EYCEGGDLDDKISEYKKSGTTIDE------NQILDWFIQLLLAVQYMHERRILHRDLKAKNIFLKNNV-IKVGDFGisri 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ------LAHSNYKEDYYLTPERLwvplrwaapellgeLHGSFvlvdqSRESNVWSLGVTLWELFEFgaqpyRHLSDEEVL 151
Cdd:cd08222    155 lmgtsdLATTFTGTPYYMSPEVL--------------KHEGY-----NSKSDIWSLGCILYEMCCL-----KHAFDGQNL 210
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198  152 AFVVRQQhVKLARPRLKLPYADYWYDILQSCW-RPPAQRPSASDLqLQLTYL 202
Cdd:cd08222    211 LSVMYKI-VEGETPSLPDKYSKELNAIYSRMLnKDPALRPSAAEI-LKIPFI 260
PK_GC-2D cd14043
Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-2D; The pseudokinase domain ...
39-195 2.43e-06

Pseudokinase domain of the membrane Guanylate Cyclase receptor, GC-2D; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity and/or ATP binding. GC-2D is allso called Retinal Guanylyl Cyclase 1 (RETGC-1) or Rod Outer Segment membrane Guanylate Cyclase (ROS-GC). It is found in the photoreceptors of the retina where it anchors the reciprocal feedback loop between calcium and cGMP, which regulates the dark, light, and recovery phases in phototransduction. It is also found in other sensory neurons and may be a universal transduction component that plays a role in the perception of all senses. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC-2D subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270945 [Multi-domain]  Cd Length: 267  Bit Score: 50.48  E-value: 2.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnYKEDYYLTPERLWVPLRWAAPELL----GELHGSFv 114
Cdd:cd14043    104 LDLIKGMRYLHHRGIVHGRLKSRNCVVDGRFVLKITDYGYNEI-LEAQNLPLPEPAPEELLWTAPELLrdprLERRGTF- 181
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFEFGAqPY--RHLSDEEVLAFVVRQQhvKLARPRLKLPYADY-WYDILQSCW-RPPAQRP 190
Cdd:cd14043    182 ------PGDVFSFAIIMQEVIVRGA-PYcmLGLSPEEIIEKVRSPP--PLCRPSVSMDQAPLeCIQLMKQCWsEAPERRP 252

                   ....*
gi 1720423198  191 SASDL 195
Cdd:cd14043    253 TFDQI 257
STKc_ERK1_2_like cd07849
Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine ...
40-144 2.98e-06

Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270839 [Multi-domain]  Cd Length: 336  Bit Score: 50.77  E-value: 2.98e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS---NYKEDYYLTPerlWVPLRW-AAPELLGELHGsfvl 115
Cdd:cd07849    114 QILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIadpEHDHTGFLTE---YVATRWyRAPEIMLNSKG---- 186
                           90       100       110
                   ....*....|....*....|....*....|...
gi 1720423198  116 vdQSRESNVWSLGVTLWELFE----FGAQPYRH 144
Cdd:cd07849    187 --YTKAIDIWSVGCILAEMLSnrplFPGKDYLH 217
STKc_PAK6 cd06659
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the ...
45-203 3.13e-06

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. PAK6 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270821 [Multi-domain]  Cd Length: 297  Bit Score: 50.37  E-value: 3.13e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   45 LAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyylTPER---LWVPLrWAAPELLGElhgsfvlVDQSRE 121
Cdd:cd06659    130 LAYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----VPKRkslVGTPY-WMAPEVISR-------CPYGTE 197
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  122 SNVWSLGVTLWELFEfGAQPYrhLSDEEVlafvvrqQHVKLAR----PRLKLPY--ADYWYDILQSCW-RPPAQRPSASD 194
Cdd:cd06659    198 VDIWSLGIMVIEMVD-GEPPY--FSDSPV-------QAMKRLRdsppPKLKNSHkaSPVLRDFLERMLvRDPQERATAQE 267

                   ....*....
gi 1720423198  195 LqLQLTYLL 203
Cdd:cd06659    268 L-LDHPFLL 275
STKc_16 cd13986
Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the ...
39-195 3.78e-06

Catalytic domain of Serine/Threonine Kinase 16; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK16 is associated with many names including Myristylated and Palmitylated Serine/threonine Kinase 1 (MPSK1), Kinase related to cerevisiae and thaliana (Krct), and Protein Kinase expressed in day 12 fetal liver (PKL12). It is widely expressed in mammals with highest levels found in liver, testis, and kidney. It is localized in the Golgi but is translocated to the nucleus upon disorganization of the Golgi. STK16 is constitutively active and is capable of phosphorylating itself and other substrates. It may be involved in regulating stromal-epithelial interactions during mammary gland ductal morphogenesis. It may also function as a transcriptional co-activator of type-C natriuretic peptide and VEGF. The STK16 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270888 [Multi-domain]  Cd Length: 282  Bit Score: 49.99  E-value: 3.78e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHN---YVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE-----------DyyLTPERLWVPLRwaAPE 104
Cdd:cd13986    113 LGICRGLKAMHEPElvpYAHRDIKPGNVLLSEDDEPILMDLGSMNPARIEiegrrealalqD--WAAEHCTMPYR--APE 188
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LLGELHGSFVlvdqSRESNVWSLGVTLWELFeFGAQPY-RHLSDEEVLAFVVRQQHVKLARPRlklPYADYWYDILQSCW 183
Cdd:cd13986    189 LFDVKSHCTI----DEKTDIWSLGCTLYALM-YGESPFeRIFQKGDSLALAVLSGNYSFPDNS---RYSEELHQLVKSML 260
                          170
                   ....*....|...
gi 1720423198  184 RP-PAQRPSASDL 195
Cdd:cd13986    261 VVnPAERPSIDDL 273
STKc_Nek1 cd08218
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
1-138 4.29e-06

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Nek1 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270858 [Multi-domain]  Cd Length: 256  Bit Score: 49.81  E-value: 4.29e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppeGMspeLPPRDlrtlQRMG--LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG- 77
Cdd:cd08218     78 MDYCDGGDLYKRINAQR---GV---LFPED----QILDwfVQLCLALKHVHDRKILHRDIKSQNIFLTKDGIIKLGDFGi 147
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 ---------LAHSNYKEDYYLTPErlwvplrwaapellgelhgsfvlVDQSR----ESNVWSLGVTLWEL------FEFG 138
Cdd:cd08218    148 arvlnstveLARTCIGTPYYLSPE-----------------------ICENKpynnKSDIWALGCVLYEMctlkhaFEAG 204
STKc_Kin1_2 cd14077
Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the ...
35-170 4.41e-06

Catalytic domain of Kin1, Kin2, and simlar Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of yeast Kin1, Kin2, and similar proteins. Fission yeast Kin1 is a membrane-associated kinase that is involved in regulating cell surface cohesiveness during interphase. It also plays a role during mitosis, linking actomyosin ring assembly with septum synthesis and membrane closure to ensure separation of daughter cells. Budding yeast Kin1 and Kin2 act downstream of the Rab-GTPase Sec4 and are associated with the exocytic apparatus; they play roles in the secretory pathway. The Kin1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270979 [Multi-domain]  Cd Length: 267  Bit Score: 49.75  E-value: 4.41e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   35 QRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSNykedyYLTPERLWV----PLRWAAPELLgelh 110
Cdd:cd14077    116 RKFARQIASALDYLHRNSIVHRDLKIENILISKSGNIKIIDFGL--SN-----LYDPRRLLRtfcgSLYFAAPELL---- 184
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198  111 gsfvlvdQSR-----ESNVWSLGVTLWELFeFGAQPYrhlSDEEVLAFvvrqqHVKLARPRLKLP 170
Cdd:cd14077    185 -------QAQpytgpEVDVWSFGVVLYVLV-CGKVPF---DDENMPAL-----HAKIKKGKVEYP 233
STKc_PKB_gamma cd05593
Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); ...
38-164 4.68e-06

Catalytic domain of the Serine/Threonine Kinase, Protein Kinase B gamma (also called Akt3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. The PKB-gamma subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270745 [Multi-domain]  Cd Length: 348  Bit Score: 50.08  E-value: 4.68e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   38 GLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL-----TPERLwvplrwaAPELLGElhgs 112
Cdd:cd05593    121 GAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMktfcgTPEYL-------APEVLED---- 189
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1720423198  113 fvlVDQSRESNVWSLGVTLWELFeFGAQPYRHlSDEEVLAFVVRQQHVKLAR 164
Cdd:cd05593    190 ---NDYGRAVDWWGLGVVMYEMM-CGRLPFYN-QDHEKLFELILMEDIKFPR 236
STKc_LRRK cd14000
Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the ...
1-199 4.73e-06

Catalytic domain of the Serine/Threonine kinase, Leucine-Rich Repeat Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. Vertebrates contain two members, LRRK1 and LRRK2, which show complementary expression in the brain. Mutations in LRRK2 are linked to both familial and sporadic forms of Parkinson's disease. The normal roles of LRRKs are not clearly defined. They may be involved in mitogen-activated protein kinase (MAPK) pathways, protein translation control, programmed cell death pathways, and cytoskeletal dynamics. The LRRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270902 [Multi-domain]  Cd Length: 275  Bit Score: 49.53  E-value: 4.73e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRA-QRPPEGMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLL-----TSDLTVRIG 74
Cdd:cd14000     87 LELAPLGSLDHLLQQdSRSFASLGRTL-------QQRIALQVADGLRYLHSAMIIYRDLKSHNVLVwtlypNSAIIIKIA 159
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   75 DYGLAHSNYKE---DYYLTPErlwvplrWAAPELL-GElhgsfvlVDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEV 150
Cdd:cd14000    160 DYGISRQCCRMgakGSEGTPG-------FRAPEIArGN-------VIYNEKVDVFSFGMLLYEILSGGAPMVGHLKFPNE 225
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  151 LAFVVRqqhvklARPRLKLPYADYW---YDILQSCWRP-PAQRPSASDLQLQL 199
Cdd:cd14000    226 FDIHGG------LRPPLKQYECAPWpevEVLMKKCWKEnPQQRPTAVTVVSIL 272
STKc_DRAK1 cd14197
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
32-194 5.17e-06

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 (also called STK17A) and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. Rabbit DRAK1 has been shown to induce apoptosis in osteoclasts and overexpressio of human DRAK1 induces apoptosis in cultured fibroblast cells. DRAK1 may be involved in apoptotic signaling. The DRAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271099 [Multi-domain]  Cd Length: 271  Bit Score: 49.55  E-value: 5.17e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   32 RTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDL---TVRIGDYGLAH--SNYKE--DYYLTPErlwvplrWAAPE 104
Cdd:cd14197    111 KDVKRLMKQILEGVSFLHNNNVVHLDLKPQNILLTSESplgDIKIVDFGLSRilKNSEElrEIMGTPE-------YVAPE 183
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LLgelhgSFVLVdqSRESNVWSLGVTLWELFEfGAQPYrhLSDEEVLAFV-VRQQHVKLARPRLKLpYADYWYDILQSCW 183
Cdd:cd14197    184 IL-----SYEPI--STATDMWSIGVLAYVMLT-GISPF--LGDDKQETFLnISQMNVSYSEEEFEH-LSESAIDFIKTLL 252
                          170
                   ....*....|..
gi 1720423198  184 -RPPAQRPSASD 194
Cdd:cd14197    253 iKKPENRATAED 264
STKc_Nek5 cd08225
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
1-134 5.32e-06

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Nek5 is one in a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173765 [Multi-domain]  Cd Length: 257  Bit Score: 49.57  E-value: 5.32e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppeGMspeLPPRDlrtlQRMG--LEIARGLAHLHSHNYVHSDLALRNCLLTSD-LTVRIGDYG 77
Cdd:cd08225     78 MEYCDGGDLMKRINRQR---GV---LFSED----QILSwfVQISLGLKHIHDRKILHRDIKSQNIFLSKNgMVAKLGDFG 147
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   78 ----------LAHSNYKEDYYLTPErlwvplrwaapellgelhgsfvlVDQSRESN----VWSLGVTLWEL 134
Cdd:cd08225    148 iarqlndsmeLAYTCVGTPYYLSPE-----------------------ICQNRPYNnktdIWSLGCVLYEL 195
STKc_LKB1 cd14119
Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer ...
43-134 5.43e-06

Catalytic domain of the Serine/Threonine kinase, Liver Kinase B1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LKB1, also called STK11, was first identified as a tumor suppressor responsible for Peutz-Jeghers syndrome, a disorder that leads to an increased risk of spontaneous epithelial cancer. It serves as a master upstream kinase that activates AMP-activated protein kinase (AMPK) and most AMPK-like kinases. LKB1 and AMPK are part of an energy-sensing pathway that links cell energy to metabolism and cell growth. They play critical roles in the establishment and maintenance of cell polarity, cell proliferation, cytoskeletal organization, as well as T-cell metabolism, including T-cell development, homeostasis, and effector function. To be activated, LKB1 requires the adaptor proteins STe20-Related ADaptor (STRAD) and mouse protein 25 (MO25). The LKB1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271021 [Multi-domain]  Cd Length: 255  Bit Score: 49.18  E-value: 5.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   43 RGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH--SNYKEDYYL-----TPerlwvplRWAAPEL---LGELHGs 112
Cdd:cd14119    108 DGLEYLHSQGIIHKDIKPGNLLLTTDGTLKISDFGVAEalDLFAEDDTCttsqgSP-------AFQPPEIangQDSFSG- 179
                           90       100
                   ....*....|....*....|..
gi 1720423198  113 fVLVDqsresnVWSLGVTLWEL 134
Cdd:cd14119    180 -FKVD------IWSAGVTLYNM 194
STKc_CDK12 cd07864
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs ...
44-135 7.19e-06

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an RS domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270847 [Multi-domain]  Cd Length: 302  Bit Score: 49.42  E-value: 7.19e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPERLwVPLRWAAPELL--GELHGSFVlvdqsre 121
Cdd:cd07864    128 GLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKV-ITLWYRPPELLlgEERYGPAI------- 199
                           90
                   ....*....|....
gi 1720423198  122 sNVWSLGVTLWELF 135
Cdd:cd07864    200 -DVWSCGCILGELF 212
YegI COG4248
Uncharacterized conserved protein YegI with protein kinase and helix-hairpin-helix DNA-binding ...
25-143 7.25e-06

Uncharacterized conserved protein YegI with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only];


Pssm-ID: 443390 [Multi-domain]  Cd Length: 476  Bit Score: 50.09  E-value: 7.25e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   25 ELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDY-GLAHSNYKEDYYL---TPERLwvplrw 100
Cdd:COG4248    114 QFPLFDWLFLLRTARNLAAAVAALHAAGYVHGDVNPSNILVSDTALVTLIDTdSFQVRDPGKVYRCvvgTPEFT------ 187
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  101 aAPELLGelhGSFVLVDQSRESNVWSLGVTLWELFEFGAQPYR 143
Cdd:COG4248    188 -PPELQG---KSFARVDRTEEHDRFGLAVLIFQLLMEGRHPFS 226
PTZ00024 PTZ00024
cyclin-dependent protein kinase; Provisional
39-134 8.11e-06

cyclin-dependent protein kinase; Provisional


Pssm-ID: 240233 [Multi-domain]  Cd Length: 335  Bit Score: 49.37  E-value: 8.11e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS--------NYKEDYYLTPERLW----VPLRWAAPELL 106
Cdd:PTZ00024   126 LQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRygyppysdTLSKDETMQRREEMtskvVTLWYRAPELL 205
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  107 --GELHGSFVlvdqsresNVWSLGVTLWEL 134
Cdd:PTZ00024   206 mgAEKYHFAV--------DMWSVGCIFAEL 227
STKc_MAPKAPK cd14089
Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated ...
40-129 8.76e-06

Catalytic domain of the Serine/Threonine kinases, Mitogen-activated protein kinase-activated protein kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPK-activated protein kinases MK2, MK3, MK5 (also called PRAK for p38-regulated/activated protein kinase), and related proteins. These proteins contain a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. In addition, MK2 and MK3 contain an N-terminal proline-rich region that can bind to SH3 domains. MK2 and MK3 are bonafide substrates for the MAPK p38, while MK5 plays a functional role in the p38 MAPK pathway although their direct interaction has been difficult to detect. MK2 and MK3 are closely related and show, thus far, indistinguishable substrate specificity, while MK5 shows a distinct spectrum of substrates. MK2 and MK3 are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270991 [Multi-domain]  Cd Length: 263  Bit Score: 48.82  E-value: 8.76e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTS---DLTVRIGDYGLAHSNYKEDYYLTPerLWVPLrWAAPELLGELHgsfvlV 116
Cdd:cd14089    108 QIGSAVAHLHSMNIAHRDLKPENLLYSSkgpNAILKLTDFGFAKETTTKKSLQTP--CYTPY-YVAPEVLGPEK-----Y 179
                           90
                   ....*....|...
gi 1720423198  117 DQSreSNVWSLGV 129
Cdd:cd14089    180 DKS--CDMWSLGV 190
STKc_AMPK_alpha cd14079
Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein ...
40-134 9.28e-06

Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. AMPK, also called SNF1 (sucrose non-fermenting1) in yeasts and SnRK1 (SNF1-related kinase1) in plants, is a heterotrimeric enzyme composed of a catalytic alpha subunit and two regulatory subunits, beta and gamma. It is a stress-activated kinase that serves as master regulator of glucose and lipid metabolism by monitoring carbon and energy supplies, via sensing the cell's AMP:ATP ratio. In response to decreased ATP levels, it enhances energy-producing processes and inhibits energy-consuming pathways. Once activated, AMPK phosphorylates a broad range of downstream targets, with effects in carbohydrate metabolism and uptake, lipid and fatty acid biosynthesis, carbon energy storage, and inflammation, among others. Defects in energy homeostasis underlie many human diseases including Type 2 diabetes, obesity, heart disease, and cancer. As a result, AMPK has emerged as a therapeutic target in the treatment of these diseases. The AMPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270981 [Multi-domain]  Cd Length: 256  Bit Score: 48.42  E-value: 9.28e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSNYKED-YYL-----TPErlwvplrWAAPELL-GELHGs 112
Cdd:cd14079    110 QIISGVEYCHRHMVVHRDLKPENLLLDSNMNVKIADFGL--SNIMRDgEFLktscgSPN-------YAAPEVIsGKLYA- 179
                           90       100
                   ....*....|....*....|..
gi 1720423198  113 fvlvdqSRESNVWSLGVTLWEL 134
Cdd:cd14079    180 ------GPEVDVWSCGVILYAL 195
STKc_RIP4_like cd14025
Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar ...
1-204 9.28e-06

Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of RIP4, ankyrin (ANK) repeat and kinase domain containing 1 (ANKK1), and similar proteins, all of which harbor C-terminal ANK repeats. RIP4, also called Protein Kinase C-associated kinase (PKK), regulates keratinocyte differentiation and cutaneous inflammation. It activates NF-kappaB and is important in the survival of diffuse large B-cell lymphoma cells. The ANKK1 protein, also called PKK2, has not been studied extensively. The ANKK1 gene, located less than 10kb downstream of the D2 dopamine receptor (DRD2) locus, is altered in the Taq1 A1 polymorphism, which is related to a reduced DRD2 binding affinity and consequently, to mental disorders. The RIP4-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270927 [Multi-domain]  Cd Length: 267  Bit Score: 48.64  E-value: 9.28e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraqrppegmSPELPPRDLRTlqRMGLEIARGLAHLHSHN--YVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd14025     72 MEYMETGSLEKLL---------ASEPLPWELRF--RIIHETAVGMNFLHCMKppLLHLDLKPANILLDAHYHVKISDFGL 140
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHSN-YKEDYYLTPERLWVPLRWAAPELLGELHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYrhlSDEEVLAFVVRQ 157
Cdd:cd14025    141 AKWNgLSHSHDLSRDGLRGTIAYLPPERFKEKNRCP-----DTKHDVYSFAIVIWGILT-QKKPF---AGENNILHIMVK 211
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1720423198  158 QhVKLARPRLKL-----PYA-DYWYDILQSCW-RPPAQRPSASDLQLQLTYLLS 204
Cdd:cd14025    212 V-VKGHRPSLSPiprqrPSEcQQMICLMKRCWdQDPRKRPTFQDITSETENLLS 264
STKc_CDKL2_3 cd07846
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; ...
6-195 9.43e-06

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270836 [Multi-domain]  Cd Length: 286  Bit Score: 48.96  E-value: 9.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    6 LGDLKRYlraqrpPEGMspelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS-NYK 84
Cdd:cd07846     87 LDDLEKY------PNGL-------DESRVRKYLFQILRGIDFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTlAAP 153
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   85 EDYYLTperlWVPLRW-AAPELL-GElhgsfvlVDQSRESNVWSLGVTLWELFE--------------------FGAQPY 142
Cdd:cd07846    154 GEVYTD----YVATRWyRAPELLvGD-------TKYGKAVDVWAVGCLVTEMLTgeplfpgdsdidqlyhiikcLGNLIP 222
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198  143 RH--LSDEEVLAFVVRQQHVKLARP-RLKLP-YADYWYDILQSCWR-PPAQRPSASDL 195
Cdd:cd07846    223 RHqeLFQKNPLFAGVRLPEVKEVEPlERRYPkLSGVVIDLAKKCLHiDPDKRPSCSEL 280
STKc_MSK2_N cd05614
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
40-142 1.06e-05

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270765 [Multi-domain]  Cd Length: 332  Bit Score: 49.15  E-value: 1.06e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDyyltPERLWV---PLRWAAPELLGELHGSFVLV 116
Cdd:cd05614    113 EIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLTEE----KERTYSfcgTIEYMAPEIIRGKSGHGKAV 188
                           90       100
                   ....*....|....*....|....*.
gi 1720423198  117 DQsresnvWSLGVTLWELFEfGAQPY 142
Cdd:cd05614    189 DW------WSLGILMFELLT-GASPF 207
STKc_Yank1 cd05578
Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the ...
40-158 1.07e-05

Catalytic domain of the Serine/Threonine Kinase, Yank1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily contains uncharacterized STKs with similarity to the human protein designated as Yank1 or STK32A. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270730 [Multi-domain]  Cd Length: 257  Bit Score: 48.41  E-value: 1.07e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDYYLTPERLWVPlrWAAPELL-GELHGsfVLVDQ 118
Cdd:cd05578    108 EIVLALDYLHSKNIIHRDIKPDNILLDEQGHVHITDFNIA-TKLTDGTLATSTSGTKP--YMAPEVFmRAGYS--FAVDW 182
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  119 sresnvWSLGVTLWELFeFGAQPYRHLSD---EEVLAFVVRQQ 158
Cdd:cd05578    183 ------WSLGVTAYEML-RGKRPYEIHSRtsiEEIRAKFETAS 218
STKc_TSSK6-like cd14164
Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs ...
26-192 1.24e-05

Catalytic domain of testis-specific serine/threonine kinase 6 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK6, also called SSTK, is expressed at the head of elongated sperm. It can phosphorylate histones and associate with heat shock protens HSP90 and HSC70. Male mice deficient in TSSK6 are infertile, showing spermatogenic impairment including reduced sperm counts, impaired DNA condensation, abnormal morphology and decreased motility rates. The TSSK6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271066 [Multi-domain]  Cd Length: 256  Bit Score: 48.32  E-value: 1.24e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   26 LPPRDLRtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSD-LTVRIGDYGLAhsNYKEDYYLTPERLWVPLRWAAPE 104
Cdd:cd14164     96 HIPKDLA--RDMFAQMVGAVNYLHDMNIVHRDLKCENILLSADdRKIKIADFGFA--RFVEDYPELSTTFCGSRAYTPPE 171
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LLgeLHGSFvlvdQSRESNVWSLGVTLWELFEfGAQPYrhlsdEEVLAFVVRQQHVKLARPR---LKLPYADYWYDILQS 181
Cdd:cd14164    172 VI--LGTPY----DPKKYDVWSLGVVLYVMVT-GTMPF-----DETNVRRLRLQQRGVLYPSgvaLEEPCRALIRTLLQF 239
                          170
                   ....*....|.
gi 1720423198  182 CwrpPAQRPSA 192
Cdd:cd14164    240 N---PSTRPSI 247
STKc_SIK cd14071
Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the ...
49-142 1.33e-05

Catalytic domain of the Serine/Threonine Kinases, Salt-Inducible kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SIKs are part of a complex network that regulates Na,K-ATPase to maintain sodium homeostasis and blood pressure. Vertebrates contain three forms of SIKs (SIK1-3) from three distinct genes, which display tissue-specific effects. SIK1, also called SNF1LK, controls steroidogenic enzyme production in adrenocortical cells. In the brain, both SIK1 and SIK2 regulate energy metabolism. SIK2, also called QIK or SNF1LK2, is involved in the regulation of gluconeogenesis in the liver and lipogenesis in adipose tissues, where it phosphorylates the insulin receptor substrate-1. In the liver, SIK3 (also called QSK) regulates cholesterol and bile acid metabolism. In addition, SIK2 plays an important role in the initiation of mitosis and regulates the localization of C-Nap1, a centrosome linker protein. The SIK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270973 [Multi-domain]  Cd Length: 253  Bit Score: 48.16  E-value: 1.33e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   49 HSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSN-YKEDYYLtpeRLWV---PlrWAAPELL-GELHgsfvlvdQSRESN 123
Cdd:cd14071    116 HKRHIVHRDLKAENLLLDANMNIKIADFGF--SNfFKPGELL---KTWCgspP--YAAPEVFeGKEY-------EGPQLD 181
                           90
                   ....*....|....*....
gi 1720423198  124 VWSLGVTLWELFeFGAQPY 142
Cdd:cd14071    182 IWSLGVVLYVLV-CGALPF 199
STKc_CDK5 cd07839
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs ...
2-81 1.45e-05

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143344 [Multi-domain]  Cd Length: 284  Bit Score: 48.20  E-value: 1.45e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQlGDLKRYLraqrppEGMSPELpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd07839     79 EYCD-QDLKKYF------DSCNGDI---DPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARA 148
STKc_CDC2L1 cd07843
Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze ...
1-134 1.49e-05

Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173741 [Multi-domain]  Cd Length: 293  Bit Score: 48.37  E-value: 1.49e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLgDLKRYLraqrppEGMSPELPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07843     85 MEYVEH-DLKSLM------ETMKQPFLQSEVKCLM---LQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR 154
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198   81 ---SNYKEdyyLTpeRLWVPLRWAAPE-LLGElhgsfvlVDQSRESNVWSLGVTLWEL 134
Cdd:cd07843    155 eygSPLKP---YT--QLVVTLWYRAPElLLGA-------KEYSTAIDMWSVGCIFAEL 200
STKc_PAK5 cd06658
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the ...
39-142 1.57e-05

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. PAK5 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132989 [Multi-domain]  Cd Length: 292  Bit Score: 48.11  E-value: 1.57e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyylTPER--LWVPLRWAAPELLGEL-HGSfvl 115
Cdd:cd06658    125 LSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE----VPKRksLVGTPYWMAPEVISRLpYGT--- 197
                           90       100
                   ....*....|....*....|....*..
gi 1720423198  116 vdqsrESNVWSLGVTLWELFEfGAQPY 142
Cdd:cd06658    198 -----EVDIWSLGIMVIEMID-GEPPY 218
STKc_CDK2_3 cd07860
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; ...
8-134 1.59e-05

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270844 [Multi-domain]  Cd Length: 284  Bit Score: 48.27  E-value: 1.59e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQrPPEGMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedy 87
Cdd:cd07860     84 DLKKFMDAS-ALTGIPLPL-------IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA------ 149
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   88 YLTPERLW----VPLRWAAPELLgeLHGSFVlvdqSRESNVWSLGVTLWEL 134
Cdd:cd07860    150 FGVPVRTYthevVTLWYRAPEIL--LGCKYY----STAVDIWSLGCIFAEM 194
PKc_PBS2_like cd06622
Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; ...
34-195 1.64e-05

Catalytic domain of fungal PBS2-like dual-specificity Mitogen-Activated Protein Kinase Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. The PBS2 subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132953 [Multi-domain]  Cd Length: 286  Bit Score: 48.31  E-value: 1.64e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHL-HSHNYVHSDLALRNCLLTSDLTVRIGDYG--------LAHSNYKEDYYLTPERLWVPLRWAAPE 104
Cdd:cd06622    104 LRRITYAVVKGLKFLkEEHNIIHRDVKPTNVLVNGNGQVKLCDFGvsgnlvasLAKTNIGCQSYMAPERIKSGGPNQNPT 183
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  105 LlgelhgsfvlvdqSRESNVWSLGVTLWELfEFGAQPYRHLSDEEVlaFVVRQQHVKLARPRLKLPYADYWYDILQSCW- 183
Cdd:cd06622    184 Y-------------TVQSDVWSLGLSILEM-ALGRYPYPPETYANI--FAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLn 247
                          170
                   ....*....|..
gi 1720423198  184 RPPAQRPSASDL 195
Cdd:cd06622    248 KIPNRRPTYAQL 259
STKc_PDK1 cd05581
Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs ...
1-135 1.71e-05

Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. It is essential for normal embryo development and is important in regulating cell volume. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270733 [Multi-domain]  Cd Length: 278  Bit Score: 47.98  E-value: 1.71e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaqrppegmspELPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA- 79
Cdd:cd05581     80 LEYAPNGDLLEYIR----------KYGSLDEKCTRFYTAEIVLALEYLHSKGIIHRDLKPENILLDEDMHIKITDFGTAk 149
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   80 --HSNYKEDYYLTPERLWVPLRWA------------APELLGELHGSFvlvdqsrESNVWSLGVTLWELF 135
Cdd:cd05581    150 vlGPDSSPESTKGDADSQIAYNQAraasfvgtaeyvSPELLNEKPAGK-------SSDLWALGCIIYQML 212
STKc_Sck1_like cd05586
Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine ...
40-134 1.93e-05

Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Schizosaccharomyces pombe Sck1 and similar fungal proteins. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270738 [Multi-domain]  Cd Length: 330  Bit Score: 48.34  E-value: 1.93e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYylTPERLWVPLRWAAPELLGELHGSFVLVDqs 119
Cdd:cd05586    104 ELVLALEHLHKNDIVYRDLKPENILLDANGHIALCDFGLSKADLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKMVD-- 179
                           90
                   ....*....|....*
gi 1720423198  120 resnVWSLGVTLWEL 134
Cdd:cd05586    180 ----FWSLGVLVFEM 190
STKc_MARK cd14072
Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; ...
40-156 1.99e-05

Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MARKs, also called Partitioning-defective 1 (Par1) proteins, function as regulators of diverse cellular processes in nematodes, Drosophila, yeast, and vertebrates. They are involved in embryogenesis, epithelial cell polarization, cell signaling, and neuronal differentiation. MARKs phosphorylate tau and related microtubule-associated proteins (MAPs), and regulates microtubule-based intracellular transport. Vertebrates contain four isoforms, namely MARK1 (or Par1c), MARK2 (or Par1b), MARK3 (Par1a), and MARK4 (or MARKL1). Known substrates of MARKs include the cell cycle-regulating phosphatase Cdc25, tyrosine phosphatase PTPH1, MAPK scaffolding protein KSR1, class IIa histone deacetylases, and plakophilin 2. The MARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270974 [Multi-domain]  Cd Length: 253  Bit Score: 47.51  E-value: 1.99e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH---SNYKEDYYL-TPErlwvplrWAAPELLgelhgsfvl 115
Cdd:cd14072    107 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNeftPGNKLDTFCgSPP-------YAAPELF--------- 170
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1720423198  116 vdQSR-----ESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd14072    171 --QGKkydgpEVDVWSLGVILYTLVS-GSLPFDGQNLKELRERVLR 213
STKc_NLK cd07853
Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer ...
40-134 2.09e-05

Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. NLK is an atypical mitogen-activated protein kinase (MAPK) that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. MAPKs are important mediators of cellular responses to extracellular signals. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173748 [Multi-domain]  Cd Length: 372  Bit Score: 48.20  E-value: 2.09e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH-SNYKEDYYLTPERlwVPLRWAAPELL-GELHGSFVLvd 117
Cdd:cd07853    111 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARvEEPDESKHMTQEV--VTQYYRAPEILmGSRHYTSAV-- 186
                           90
                   ....*....|....*..
gi 1720423198  118 qsresNVWSLGVTLWEL 134
Cdd:cd07853    187 -----DIWSVGCIFAEL 198
STKc_TDY_MAPK cd07859
Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; ...
40-134 2.18e-05

Catalytic domain of the Serine/Threonine Kinases, Plant TDY Mitogen-Activated Protein Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Plant MAPKs are typed based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs; Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20 while Oryza sativa contains at least 17 MAPKs. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143364 [Multi-domain]  Cd Length: 338  Bit Score: 48.24  E-value: 2.18e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyylTPERL----WVPLRW-AAPELLGELHGSFv 114
Cdd:cd07859    111 QLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND----TPTAIfwtdYVATRWyRAPELCGSFFSKY- 185
                           90       100
                   ....*....|....*....|
gi 1720423198  115 lvdqSRESNVWSLGVTLWEL 134
Cdd:cd07859    186 ----TPAIDIWSIGCIFAEV 201
STKc_LIMK1 cd14221
Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the ...
35-203 2.21e-05

Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LIMK1 activation is induced by bone morphogenic protein, vascular endothelial growth factor, and thrombin. It plays roles in microtubule disassembly and cell cycle progression, and is critical in the regulation of neurite outgrowth. LIMK1 knockout mice show abnormalities in dendritic spine morphology and synaptic function. LIMK1 is one of the genes deleted in patients with Williams Syndrome, which is characterized by distinct craniofacial features, cardiovascular problems, as well as behavioral and neurological abnormalities. LIMKs phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They act downstream of Rho GTPases and are expressed ubiquitously. As regulators of actin dynamics, they contribute to diverse cellular functions such as cell motility, morphogenesis, differentiation, apoptosis, meiosis, mitosis, and neurite extension. LIMKs contain the LIM (two repeats), PDZ, and catalytic kinase domains. The LIMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271123 [Multi-domain]  Cd Length: 267  Bit Score: 47.64  E-value: 2.21e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   35 QRMGL--EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE-DYYLTPERLWVPLR-----------W 100
Cdd:cd14221     92 QRVSFakDIASGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEkTQPEGLRSLKKPDRkkrytvvgnpyW 171
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  101 AAPELlgeLHGSfvlvDQSRESNVWSLGVTLWELF-EFGAQPyRHLSDEEVLAFVVR---QQHVKLARPRLKLPYAdywy 176
Cdd:cd14221    172 MAPEM---INGR----SYDEKVDVFSFGIVLCEIIgRVNADP-DYLPRTMDFGLNVRgflDRYCPPNCPPSFFPIA---- 239
                          170       180
                   ....*....|....*....|....*..
gi 1720423198  177 diLQSCWRPPAQRPSASDLQLQLTYLL 203
Cdd:cd14221    240 --VLCCDLDPEKRPSFSKLEHWLETLR 264
STKc_p38 cd07851
Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs ...
8-134 2.29e-05

Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143356 [Multi-domain]  Cd Length: 343  Bit Score: 48.06  E-value: 2.29e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQRppegMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE-- 85
Cdd:cd07851    105 DLNNIVKCQK----LSDD-------HIQFLVYQILRGLKYIHSAGIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEmt 173
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198   86 DYYLTperlwvplRW-AAPE-LLGELHGSfVLVDqsresnVWSLGVTLWEL 134
Cdd:cd07851    174 GYVAT--------RWyRAPEiMLNWMHYN-QTVD------IWSVGCIMAEL 209
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
1-79 2.44e-05

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 48.64  E-value: 2.44e-05
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRdlRTLQRMGlEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA 79
Cdd:NF033483    86 MEYVDGRTLKDYIREHGP-------LSPE--EAVEIMI-QILSALEHAHRNGIVHRDIKPQNILITKDGRVKVTDFGIA 154
STKc_ULK1_2-like cd14120
Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar ...
1-79 2.64e-05

Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. ULK1 is required for efficient amino acid starvation-induced autophagy and mitochondrial clearance. ULK2 is ubiquitously expressed and is essential in autophagy induction. ULK1 and ULK2 have unique and cell-type specific roles, but also display partially redundant roles in starvation-induced autophagy. They both display neuron-specific functions: ULK1 is involved in non-clathrin-coated endocytosis in growth cones, filopodia extension, and axon branching; ULK2 plays a role in axon development. The ULK1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271022 [Multi-domain]  Cd Length: 256  Bit Score: 47.36  E-value: 2.64e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLT---------SDLTV 71
Cdd:cd14120     71 MEYCNGGDLADYLQAKG-------TLSEDTIRVFLQ---QIAAAMKALHSKGIVHRDLKPQNILLShnsgrkpspNDIRL 140

                   ....*...
gi 1720423198   72 RIGDYGLA 79
Cdd:cd14120    141 KIADFGFA 148
STKc_CdkB_plant cd07837
Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; ...
8-134 2.65e-05

Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270830 [Multi-domain]  Cd Length: 294  Bit Score: 47.52  E-value: 2.65e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQRppEGMSPELPPRdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTV-RIGDYGLAHSnyked 86
Cdd:cd07837     90 DLKKFIDSYG--RGPHNPLPAK---TIQSFMYQLCKGVAHCHSHGVMHRDLKPQNLLVDKQKGLlKIADLGLGRA----- 159
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198   87 yYLTPERLW----VPLRWAAPE-LLGELHgsfvlvdQSRESNVWSLGVTLWEL 134
Cdd:cd07837    160 -FTIPIKSYtheiVTLWYRAPEvLLGSTH-------YSTPVDMWSVGCIFAEM 204
STKc_PLK2 cd14188
Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the ...
1-142 2.67e-05

Catalytic domain of the Serine/Threonine Kinase, Polo-like kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PLKs play important roles in cell cycle progression and in DNA damage responses. They regulate mitotic entry, mitotic exit, and cytokinesis. In general PLKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory polo box domain (PBD), which is comprised by two bipartite polo-box motifs (or polo boxes) and is involved in protein interactions. There are five mammalian PLKs (PLK1-5) from distinct genes. PLK2, also called Snk (serum-inducible kinase), functions in G1 progression, S-phase arrest, and centriole duplication. Its gene is responsive to both growth factors and cellular stress, is a transcriptional target of p53, and activates a G2-M checkpoint. The PLK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271090 [Multi-domain]  Cd Length: 255  Bit Score: 47.31  E-value: 2.67e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14188     80 LEYCSRRSMAHILKARKV-------LTEPEVRYYLR---QIVSGLKYLHEQEILHRDLKLGNFFINENMELKVGDFGLAA 149
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198   81 -----SNYKEDYYLTPERLwvplrwaAPELLGEL-HGSfvlvdqsrESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd14188    150 rleplEHRRRTICGTPNYL-------SPEVLNKQgHGC--------ESDIWALGCVMYTML-LGRPPF 201
STKc_p38beta cd07878
Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase ...
34-136 2.69e-05

Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase (also called MAPK11); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38beta/MAPK11 is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143383 [Multi-domain]  Cd Length: 343  Bit Score: 47.74  E-value: 2.69e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHsnyKEDYYLTPerlWVPLRW-AAPE-LLGELHg 111
Cdd:cd07878    120 VQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADDEMTG---YVATRWyRAPEiMLNWMH- 192
                           90       100
                   ....*....|....*....|....*
gi 1720423198  112 sfvlvdQSRESNVWSLGVTLWELFE 136
Cdd:cd07878    193 ------YNQTVDIWSVGCIMAELLK 211
STKc_DCKL cd14095
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called ...
1-151 2.76e-05

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase (also called Doublecortin-like and CAM kinase-like); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL (or DCAMKL) proteins belong to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. In addition, DCKL proteins contain a C-terminal kinase domain with similarity to CAMKs. They are involved in the regulation of cAMP signaling. Vertebrates contain three DCKL proteins (DCKL1-3); DCKL1 and 2 also contain a serine, threonine, and proline rich domain (SP), while DCKL3 contains only a single DCX domain instead of tandem domains. The DCKL subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270997 [Multi-domain]  Cd Length: 258  Bit Score: 47.32  E-value: 2.76e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLR-AQRPPEgmspelpprdlRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSD----LTVRIGD 75
Cdd:cd14095     77 MELVKGGDLFDAITsSTKFTE-----------RDASRMVTDLAQALKYLHSLSIVHRDIKPENLLVVEHedgsKSLKLAD 145
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   76 YGLAhSNYKEDYYL---TPErlwvplrWAAPELLGELhGSFVLVDqsresnVWSLGVTLWELFeFGAQPYRHLS-DEEVL 151
Cdd:cd14095    146 FGLA-TEVKEPLFTvcgTPT-------YVAPEILAET-GYGLKVD------IWAAGVITYILL-CGFPPFRSPDrDQEEL 209
STKc_CaMKK1 cd14200
Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; ...
40-153 2.77e-05

Catalytic domain of the Serine/Threonine kinase, Calmodulin Dependent Protein Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKKs are upstream kinases of the CaM kinase cascade that phosphorylate and activate CaMKI and CamKIV. They may also phosphorylate other substrates including PKB and AMP-activated protein kinase (AMPK). CaMKK1, also called CaMKK alpha, is involved in the regulation of glucose uptake in skeletal muscles, independently of AMPK and PKB activation. It also play roles in learning and memory. Studies on CaMKK1 knockout mice reveal deficits in fear conditioning. The CaMKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271102 [Multi-domain]  Cd Length: 284  Bit Score: 47.25  E-value: 2.77e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL-----TPErlwvplrWAAPELLGELHGSFv 114
Cdd:cd14200    132 DIVLGIEYLHYQKIVHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDALLsstagTPA-------FMAPETLSDSGQSF- 203
                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1720423198  115 lvdQSRESNVWSLGVTLWeLFEFGAQPYrhlSDEEVLAF 153
Cdd:cd14200    204 ---SGKALDVWAMGVTLY-CFVYGKCPF---IDEFILAL 235
STKc_p38alpha cd07877
Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase ...
34-135 2.80e-05

Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase (also called MAPK14); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. p38alpha/MAPK14 is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. p38 kinases MAPKs, serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143382 [Multi-domain]  Cd Length: 345  Bit Score: 47.73  E-value: 2.80e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyyLTPerlWVPLRW-AAPELLGELHGS 112
Cdd:cd07877    122 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTG---YVATRWyRAPEIMLNWMHY 195
                           90       100
                   ....*....|....*....|...
gi 1720423198  113 FVLVDqsresnVWSLGVTLWELF 135
Cdd:cd07877    196 NQTVD------IWSVGCIMAELL 212
STKc_PhKG1 cd14182
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs ...
26-144 3.18e-05

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 1 subunit (PhKG1) is also referred to as the muscle gamma isoform. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271084 [Multi-domain]  Cd Length: 276  Bit Score: 47.22  E-value: 3.18e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   26 LPPRDLRTLQRMGLEIargLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA---HSNYK-EDYYLTPERLwvplrwa 101
Cdd:cd14182    107 LSEKETRKIMRALLEV---ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFScqlDPGEKlREVCGTPGYL------- 176
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1720423198  102 APELL----GELHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRH 144
Cdd:cd14182    177 APEIIecsmDDNHPGY-----GKEVDMWSTGVIMYTLLA-GSPPFWH 217
STKc_STK33 cd14097
Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the ...
1-157 3.22e-05

Catalytic domain of Serine/Threonine Kinase 33; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK33 is highly expressed in the testis and is present in low levels in most tissues. It may be involved in spermatogenesis and organ ontogenesis. It interacts with and phosphorylates vimentin and may be involved in regulating intermediate filament cytoskeletal dynamics. Its role in promoting the cell viability of KRAS-dependent cancer cells is under debate; some studies have found STK33 to promote cancer cell viability, while other studies have found it to be non-essential. KRAS is the most commonly mutated human oncogene, thus, studies on the role of STK33 in KRAS mutant cancer cells are important. The STK33 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270999 [Multi-domain]  Cd Length: 266  Bit Score: 47.16  E-value: 3.22e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAqrppEGMSPELPPRDLrtLQRMgleiARGLAHLHSHNYVHSDLALRNCLLTSD-------LTVRI 73
Cdd:cd14097     79 MELCEDGELKELLLR----KGFFSENETRHI--IQSL----ASAVAYLHKNDIVHRDLKLENILVKSSiidnndkLNIKV 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   74 GDYGLAHSNYKEDYYLTPERLWVPLrWAAPELLGELhgsfvlvDQSRESNVWSLGVTLWELFEfGAQPYRHlSDEEVLAF 153
Cdd:cd14097    149 TDFGLSVQKYGLGEDMLQETCGTPI-YMAPEVISAH-------GYSQQCDIWSIGVIMYMLLC-GEPPFVA-KSEEKLFE 218

                   ....
gi 1720423198  154 VVRQ 157
Cdd:cd14097    219 EIRK 222
STKc_BMPR1 cd14144
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; ...
30-192 3.71e-05

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type I Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1 functions as a receptor for morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Vertebrates contain two type I BMP receptors, BMPR1a and BMPR1b. BMPR1 belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that also includes TGFbeta, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271046 [Multi-domain]  Cd Length: 287  Bit Score: 47.09  E-value: 3.71e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNY--------VHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE--DYYLTPERLWVPLR 99
Cdd:cd14144     90 DTQSMLKLAYSAACGLAHLHTEIFgtqgkpaiAHRDIKSKNILVKKNGTCCIADLGLAVKFISEtnEVDLPPNTRVGTKR 169
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  100 WAAPELLGEL--HGSFvlvDQSRESNVWSLGVTLWE---------LFEFGAQPYRHL-----SDEEVLAFVVrqqhVKLA 163
Cdd:cd14144    170 YMAPEVLDESlnRNHF---DAYKMADMYSFGLVLWEiarrcisggIVEEYQLPYYDAvpsdpSYEDMRRVVC----VERR 242
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  164 RPrlklPYADYWYD---------ILQSCWRP-PAQRPSA 192
Cdd:cd14144    243 RP----SIPNRWSSdevlrtmskLMSECWAHnPAARLTA 277
STKc_cPKC cd05587
Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; ...
40-151 3.72e-05

Catalytic domain of the Serine/Threonine Kinase, Classical (or Conventional) Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. cPKCs are potent kinases for histones, myelin basic protein, and protamine. They depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270739 [Multi-domain]  Cd Length: 320  Bit Score: 47.39  E-value: 3.72e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPErlwvplrWAAPE-LLGELHGSF 113
Cdd:cd05587    105 EIAVGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEGIFGGkttrtFCGTPD-------YIAPEiIAYQPYGKS 177
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1720423198  114 VlvdqsresNVWSLGVTLWELfeFGAQPYRHLSDEEVL 151
Cdd:cd05587    178 V--------DWWAYGVLLYEM--LAGQPPFDGEDEDEL 205
STKc_MAPK4_6 cd07854
Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also ...
43-134 4.10e-05

Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK4 (also called ERK4 or p63MAPK) and MAPK6 (also called ERK3 or p97MAPK) are atypical MAPKs that are not regulated by MAPK kinases. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. MAPKs are important mediators of cellular responses to extracellular signals. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143359 [Multi-domain]  Cd Length: 342  Bit Score: 47.08  E-value: 4.10e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   43 RGLAHLHSHNYVHSDLALRNCLL-TSDLTVRIGDYGLAH---SNYKEDYYLTPErlwVPLRW-AAPELLgeLHGSfvlvD 117
Cdd:cd07854    125 RGLKYIHSANVLHRDLKPANVFInTEDLVLKIGDFGLARivdPHYSHKGYLSEG---LVTKWyRSPRLL--LSPN----N 195
                           90
                   ....*....|....*..
gi 1720423198  118 QSRESNVWSLGVTLWEL 134
Cdd:cd07854    196 YTKAIDMWAAGCIFAEM 212
PKc_Dusty cd13975
Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze ...
29-199 4.39e-05

Catalytic domain of the Dual-specificity Protein Kinase, Dusty; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. Dusty protein kinase is also called Receptor-interacting protein kinase 5 (RIPK5 or RIP5) or RIP-homologous kinase. It is widely distributed in the central nervous system, and may be involved in inducing both caspase-dependent and caspase-independent cell death. The Dusty subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270877 [Multi-domain]  Cd Length: 262  Bit Score: 46.71  E-value: 4.39e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   29 RDLRTLQRMGLEI----------ARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnyKEDYYLTPERLWVPL 98
Cdd:cd13975     89 RDLYTGIKAGLSLeerlqialdvVEGIRFLHSQGLVHRDIKLKNVLLDKKNRAKITDLGFC----KPEAMMSGSIVGTPI 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   99 RwAAPELLGELHGSFVlvdqsresNVWSLGVTLWELFEFGA---QPYRHLSDEEVLAFVVRqqhvKLARPRLKLPYADYW 175
Cdd:cd13975    165 H-MAPELFSGKYDNSV--------DVYAFGILFWYLCAGHVklpEAFEQCASKDHLWNNVR----KGVRPERLPVFDEEC 231
                          170       180
                   ....*....|....*....|....*
gi 1720423198  176 YDILQSCWR-PPAQRPSASDLQLQL 199
Cdd:cd13975    232 WNLMEACWSgDPSQRPLLGIVQPKL 256
PTK_Jak2_rpt1 cd05078
Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 2; Jak2 is widely ...
2-191 4.57e-05

Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 2; Jak2 is widely expressed in many tissues. It is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak2 is a cytoplasmic (or nonreceptor) PTK containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. Despite this, the presumed pseudokinase (repeat 1) domain of Jak2 exhibits dual-specificity kinase activity, phosphorylating two negative regulatory sites in Jak2: Ser523 and Tyr570. Inactivation of the repeat 1 domain increased Jak2 basal activity, suggesting that it modulates the kinase activity of the C-terminal catalytic (repeat 2) domain. The Jak2 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270663 [Multi-domain]  Cd Length: 262  Bit Score: 46.48  E-value: 4.57e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRaqrppegmspelppRDLRTLQRM-GLEIARGLA----HLHSHNYVHSDLALRNCLLTSDLT------ 70
Cdd:cd05078     83 EYVKFGSLDTYLK--------------KNKNCINILwKLEVAKQLAwamhFLEEKTLVHGNVCAKNILLIREEDrktgnp 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   71 --VRIGDYGLAHSNYKEDYYLtpERL-WVPlrwaaPELlgelhgsfvlVDQSRE----SNVWSLGVTLWELFEFGAQPYR 143
Cdd:cd05078    149 pfIKLSDPGISITVLPKDILL--ERIpWVP-----PEC----------IENPKNlslaTDKWSFGTTLWEICSGGDKPLS 211
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198  144 HLSDEEVLAFVVRqqhvklaRPRLKLPYADYWYDILQSCWR-PPAQRPS 191
Cdd:cd05078    212 ALDSQRKLQFYED-------RHQLPAPKWTELANLINNCMDyEPDHRPS 253
STKc_MAPKAPK3 cd14172
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
40-135 4.80e-05

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 3 (MAPKAP3 or MK3) contains an N-terminal proline-rich region that can bind to SH3 domains, a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK3 is a bonafide substrate for the MAPK p38. It is closely related to MK2 and thus far, MK2/3 show indistinguishable substrate specificity. They are mainly involved in the regulation of gene expression and they participate in diverse cellular processes such as endocytosis, cytokine production, cytoskeletal reorganization, cell migration, cell cycle control and chromatin remodeling. They are implicated in inflammation and cance and their substrates include mRNA-AU-rich-element (ARE)-binding proteins (TTP and hnRNP A0), Hsp proteins (Hsp27 and Hsp25) and RSK, among others. MK2/3 are both expressed ubiquitously but MK2 is expressed at significantly higher levels. MK3 activity is only significant when MK2 is absent. The MK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271074 [Multi-domain]  Cd Length: 267  Bit Score: 46.52  E-value: 4.80e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTS---DLTVRIGDYGLAHSNYKEDYYLTPerLWVPLrWAAPELLGELHgsfvlV 116
Cdd:cd14172    111 DIGTAIQYLHSMNIAHRDVKPENLLYTSkekDAVLKLTDFGFAKETTVQNALQTP--CYTPY-YVAPEVLGPEK-----Y 182
                           90
                   ....*....|....*....
gi 1720423198  117 DQSreSNVWSLGVTLWELF 135
Cdd:cd14172    183 DKS--CDMWSLGVIMYILL 199
PKc_LIMK_like_unk cd14156
Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs ...
37-134 5.02e-05

Catalytic domain of an unknown subfamily of LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. This group is composed of uncharacterized proteins with similarity to LIMK and Testicular or testis-specific protein kinase (TESK). LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271058 [Multi-domain]  Cd Length: 256  Bit Score: 46.36  E-value: 5.02e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   37 MGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVR---IGDYGLAHSnYKEDYYLTPER---LWVPLRWAAPELL-GEL 109
Cdd:cd14156     94 LACDISRGMVYLHSKNIYHRDLNSKNCLIRVTPRGReavVTDFGLARE-VGEMPANDPERklsLVGSAFWMAPEMLrGEP 172
                           90       100
                   ....*....|....*....|....*
gi 1720423198  110 HgsfvlvdqSRESNVWSLGVTLWEL 134
Cdd:cd14156    173 Y--------DRKVDVFSFGIVLCEI 189
STKc_GRK4_like cd05605
Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs ...
40-150 5.08e-05

Catalytic domain of G protein-coupled Receptor Kinase 4-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. They contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK4-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270756 [Multi-domain]  Cd Length: 285  Bit Score: 46.58  E-value: 5.08e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyylTPERLWVPLR-----WAAPELLGELHGSFv 114
Cdd:cd05605    110 EITCGLEHLHSERIVYRDLKPENILLDDHGHVRISDLGLAVE--------IPEGETIRGRvgtvgYMAPEVVKNERYTF- 180
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFEfGAQPYR----HLSDEEV 150
Cdd:cd05605    181 ------SPDWWGLGCLIYEMIE-GQAPFRarkeKVKREEV 213
PKc_MKK5 cd06619
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
34-195 5.28e-05

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 5; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK5 (also called MEK5) is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132950 [Multi-domain]  Cd Length: 279  Bit Score: 46.41  E-value: 5.28e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG--------LAHSNYKEDYYLTPERlwvplrwaapeL 105
Cdd:cd06619     97 LGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGvstqlvnsIAKTYVGTNAYMAPER-----------I 165
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  106 LGELHGSfvlvdqsrESNVWSLGVTLWELfEFGAQPYRHLSDEE--VLAFVVRQQHVKLARPRLKL-PYADYWYDILQSC 182
Cdd:cd06619    166 SGEQYGI--------HSDVWSLGISFMEL-ALGRFPYPQIQKNQgsLMPLQLLQCIVDEDPPVLPVgQFSEKFVHFITQC 236
                          170
                   ....*....|....
gi 1720423198  183 WR-PPAQRPSASDL 195
Cdd:cd06619    237 MRkQPKERPAPENL 250
STKc_ACVR2b cd14140
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the ...
41-192 5.40e-05

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIB Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2b (or ActRIIB) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2b subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271042 [Multi-domain]  Cd Length: 291  Bit Score: 46.56  E-value: 5.40e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHSH-----------NYVHSDLALRNCLLTSDLTVRIGDYGLA------------HSNYKEDYYLTPERLWVP 97
Cdd:cd14140    101 MARGLSYLHEDvprckgeghkpAIAHRDFKSKNVLLKNDLTAVLADFGLAvrfepgkppgdtHGQVGTRRYMAPEVLEGA 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   98 LRWAapellgelHGSFVLVDqsresnVWSLGVTLWEL---------------FEFGAQPYRHLSDEEVLAFVVrqqHVKL 162
Cdd:cd14140    181 INFQ--------RDSFLRID------MYAMGLVLWELvsrckaadgpvdeymLPFEEEIGQHPSLEDLQEVVV---HKKM 243
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720423198  163 aRPRLKlpyaDYWYD---------ILQSCWRPPAQ-RPSA 192
Cdd:cd14140    244 -RPVFK----DHWLKhpglaqlcvTIEECWDHDAEaRLSA 278
STKc_MSK_N cd05583
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
40-142 5.44e-05

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270735 [Multi-domain]  Cd Length: 268  Bit Score: 46.23  E-value: 5.44e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-----AHSNYKE-DYYLTPErlwvplrWAAPELL-GELHGS 112
Cdd:cd05583    107 EIVLALEHLHKLGIIYRDIKLENILLDSEGHVVLTDFGLskeflPGENDRAySFCGTIE-------YMAPEVVrGGSDGH 179
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  113 FVLVDQsresnvWSLGVTLWELFEfGAQPY 142
Cdd:cd05583    180 DKAVDW------WSLGVLTYELLT-GASPF 202
STKc_Byr2_like cd06628
Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein ...
40-195 5.66e-05

Catalytic domain of the Serine/Threonine Kinases, fungal Byr2-like Mitogen-Activated Protein Kinase Kinase Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. The Byr2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270798 [Multi-domain]  Cd Length: 267  Bit Score: 46.37  E-value: 5.66e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDYYLTPERLWVP-----LRWAAPELLGElhgsfv 114
Cdd:cd06628    114 QILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS-KKLEANSLSTKNNGARPslqgsVFWMAPEVVKQ------ 186
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLaFVVRQqhvkLARPRLKLPYADYWYDILQSCWRPP-AQRPSAS 193
Cdd:cd06628    187 -TSYTRKADIWSLGCLVVEMLT-GTHPFPDCTQMQAI-FKIGE----NASPTIPSNISSEARDFLEKTFEIDhNKRPTAD 259

                   ..
gi 1720423198  194 DL 195
Cdd:cd06628    260 EL 261
PKc_MKK3_6 cd06617
Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase ...
34-196 5.93e-05

Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase Kinases 3 and 6; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 play roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. The MKK3/6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173729 [Multi-domain]  Cd Length: 283  Bit Score: 46.26  E-value: 5.93e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHLHSH-NYVHSDLALRNCLLTSDLTVRIGDYGLahSNYKEDY-----------YLTPERLwvplrwa 101
Cdd:cd06617    105 LGKIAVSIVKALEYLHSKlSVIHRDVKPSNVLINRNGQVKLCDFGI--SGYLVDSvaktidagckpYMAPERI------- 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  102 APEllGELHGSFVlvdqsrESNVWSLGVTLWELfEFGAQPYRHLSDE-EVLAFVVRQQHVKLARPRLKLPYADYwydILQ 180
Cdd:cd06617    176 NPE--LNQKGYDV------KSDVWSLGITMIEL-ATGRFPYDSWKTPfQQLKQVVEEPSPQLPAEKFSPEFQDF---VNK 243
                          170
                   ....*....|....*.
gi 1720423198  181 SCWRPPAQRPSASDLQ 196
Cdd:cd06617    244 CLKKNYKERPNYPELL 259
STKc_MEKK2 cd06652
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
40-195 6.04e-05

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK2 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270818 [Multi-domain]  Cd Length: 264  Bit Score: 46.19  E-value: 6.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYG---------LAHSNYKEdYYLTPerlwvplRWAAPELL-GEL 109
Cdd:cd06652    114 QILEGVHYLHSNMIVHRDIKGANILRDSVGNVKLGDFGaskrlqticLSGTGMKS-VTGTP-------YWMSPEVIsGEG 185
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  110 HGsfvlvdqsRESNVWSLGVTLWELFEfGAQPYrhlSDEEVLAFVVRQQhVKLARPRLKLPYADYWYDILQSCWRPPAQR 189
Cdd:cd06652    186 YG--------RKADIWSVGCTVVEMLT-EKPPW---AEFEAMAAIFKIA-TQPTNPQLPAHVSDHCRDFLKRIFVEAKLR 252

                   ....*.
gi 1720423198  190 PSASDL 195
Cdd:cd06652    253 PSADEL 258
STKc_Chk1 cd14069
Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the ...
1-131 6.61e-05

Catalytic domain of the Serine/Threonine kinase, Checkpoint kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chk1 is implicated in many major checkpoints of the cell cycle, providing a link between upstream sensors and the cell cycle engine. It plays an important role in DNA damage response and maintaining genomic stability. Chk1 acts as an effector of the sensor kinase, ATR (ATM and Rad3-related), a member of the PI3K family, which is activated upon DNA replication stress. Chk1 delays mitotic entry in response to replication blocks by inhibiting cyclin dependent kinase (Cdk) activity. In addition, Chk1 contributes to the function of centrosome and spindle-based checkpoints, inhibits firing of origins of DNA replication (Ori), and represses transcription of cell cycle proteins including cyclin B and Cdk1. The Chk1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270971 [Multi-domain]  Cd Length: 261  Bit Score: 46.17  E-value: 6.61e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLkrYLRAQrPPEGMSPELPPRDLRTLqrmgleIArGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAh 80
Cdd:cd14069     79 LEYASGGEL--FDKIE-PDVGMPEDVAQFYFQQL------MA-GLKYLHSCGITHRDIKPENLLLDENDNLKISDFGLA- 147
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   81 SNYKedyYLTPERLWVPLR----WAAPELLG--ELHGSFVlvdqsresNVWSLGVTL 131
Cdd:cd14069    148 TVFR---YKGKERLLNKMCgtlpYVAPELLAkkKYRAEPV--------DVWSCGIVL 193
STKc_MSK1_N cd05613
N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
40-142 7.10e-05

N-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270764 [Multi-domain]  Cd Length: 290  Bit Score: 46.15  E-value: 7.10e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhsnyKEDYYLTPERLWV---PLRWAAPELL-GELHGSFVL 115
Cdd:cd05613    113 EIVLALEHLHKLGIIYRDIKLENILLDSSGHVVLTDFGLS----KEFLLDENERAYSfcgTIEYMAPEIVrGGDSGHDKA 188
                           90       100
                   ....*....|....*....|....*..
gi 1720423198  116 VDQsresnvWSLGVTLWELFEfGAQPY 142
Cdd:cd05613    189 VDW------WSLGVLMYELLT-GASPF 208
STKc_myosinIIIB_N cd06639
N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze ...
44-134 7.50e-05

N-terminal Catalytic domain of the Serine/Threonine Kinase, Class IIIB myosin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. They may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270808 [Multi-domain]  Cd Length: 291  Bit Score: 46.14  E-value: 7.50e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPERL------WVPLrWAAPELLGelhgsfvlVD 117
Cdd:cd06639    140 GLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ-------LTSARLrrntsvGTPF-WMAPEVIA--------CE 203
                           90       100
                   ....*....|....*....|...
gi 1720423198  118 QSRES------NVWSLGVTLWEL 134
Cdd:cd06639    204 QQYDYsydarcDVWSLGITAIEL 226
STKc_PhKG2 cd14181
Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs ...
26-144 8.17e-05

Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Phosphorylase kinase (PhK) catalyzes the phosphorylation of inactive phosphorylase b to form the active phosphorylase a. It coordinates hormonal, metabolic, and neuronal signals to initiate the breakdown of glycogen stores, which enables the maintenance of blood-glucose homeostasis during fasting, and is also used as a source of energy for muscle contraction. PhK is one of the largest and most complex protein kinases, composed of a heterotetramer containing four molecules each of four subunit types: one catalytic (gamma) and three regulatory (alpha, beta, and delta). The gamma 2 subunit (PhKG2) is also referred to as the testis/liver gamma isoform. Mutations in its gene cause autosomal-recessive glycogenosis of the liver. The gamma subunit, when isolated, is constitutively active and does not require phosphorylation of the A-loop for activity. The regulatory subunits restrain this kinase activity until signals are received to relieve this inhibition. For example, the kinase is activated in response to hormonal stimulation, after autophosphorylation or phosphorylation by cAMP-dependent kinase of the alpha and beta subunits. The high-affinity binding of ADP to the beta subunit also stimulates kinase activity, whereas calcium relieves inhibition by binding to the delta (calmodulin) subunit. The PhKG2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271083 [Multi-domain]  Cd Length: 279  Bit Score: 46.12  E-value: 8.17e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   26 LPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDYYL-----TPERLwvplrw 100
Cdd:cd14181    113 LSEKETRSIMRSLLE---AVSYLHANNIVHRDLKPENILLDDQLHIKLSDFGFS-CHLEPGEKLrelcgTPGYL------ 182
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1720423198  101 aAPELL----GELHGSFvlvdqSRESNVWSLGVTLWELFEfGAQPYRH 144
Cdd:cd14181    183 -APEILkcsmDETHPGY-----GKEVDLWACGVILFTLLA-GSPPFWH 223
PTK_Jak3_rpt1 cd14208
Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 3; Jak3 is ...
2-191 8.26e-05

Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 3; Jak3 is expressed only in hematopoietic cells. It binds the shared receptor subunit, common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Jak3 is a cytoplasmic (or nonreceptor) PTK containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). The Jak3 subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271110 [Multi-domain]  Cd Length: 260  Bit Score: 45.66  E-value: 8.26e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRaQRPPEGMSPelpprdlrtlQRMGLEIARGLAH----LHSHNYVHSDLALRNCLLT------SDLTV 71
Cdd:cd14208     81 EFVCHGALDLYLK-KQQQKGPVA----------ISWKLQVVKQLAYalnyLEDKQLVHGNVSAKKVLLSregdkgSPPFI 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   72 RIGDYGLAHSnykedyYLTPERLWVPLRWAAPELLGELHgsfvlvDQSRESNVWSLGVTLWELFEFGAQPYRHLSDEEVL 151
Cdd:cd14208    150 KLSDPGVSIK------VLDEELLAERIPWVAPECLSDPQ------NLALEADKWGFGATLWEIFSGGHMPLSALDPSKKL 217
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  152 AFVvrqqhvklaRPRLKLPyADYWYD----ILQSCWRPPAQRPS 191
Cdd:cd14208    218 QFY---------NDRKQLP-APHWIElaslIQQCMSYNPLLRPS 251
STKc_PDIK1L cd13977
Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs ...
1-136 8.59e-05

Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PDIK1L is also called STK35 or CLIK-1. It is predominantly a nuclear protein which is capable of autophosphorylation. Through its interaction with the PDZ-LIM protein CLP-36, it is localized to actin stress fibers. The PDIK1L subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270879 [Multi-domain]  Cd Length: 322  Bit Score: 46.01  E-value: 8.59e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTS---DLTVRIGDYG 77
Cdd:cd13977    114 MEFCDGGDMNEYLLSRRP-----------DRQTNTSFMLQLSSALAFLHRNQIVHRDLKPDNILISHkrgEPILKVADFG 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   78 LAH------SNYKE---------------DYYLTPErLWvplrwaapellgELHgsfvlvdQSRESNVWSLGVTLWELFE 136
Cdd:cd13977    183 LSKvcsgsgLNPEEpanvnkhflssacgsDFYMAPE-VW------------EGH-------YTAKADIFALGIIIWAMVE 242
STKc_DAPK1 cd14194
Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs ...
40-154 8.99e-05

Catalytic domain of the Serine/Threonine Kinase, Death-Associated Protein Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DAPKs mediate cell death and act as tumor suppressors. They are necessary to induce cell death and their overexpression leads to death-associated changes including membrane blebbing, cell rounding, and formation of autophagic vesicles. Vertebrates contain three subfamily members with different domain architecture, localization, and function. DAPK1 is the prototypical member of the subfamily and is also simply referred to as DAPK. It is Ca2+/calmodulin (CaM)-regulated and actin-associated protein that contains an N-terminal kinase domain followed by an autoinhibitory CaM binding region and a large C-terminal extension with multiple functional domains including ankyrin (ANK) repeats, a cytoskeletal binding domain, a Death domain, and a serine-rich tail. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. The DAPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271096 [Multi-domain]  Cd Length: 269  Bit Score: 45.78  E-value: 8.99e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLL----TSDLTVRIGDYGLAH----SNYKEDYYLTPErlwvplrWAAPELLG-ELH 110
Cdd:cd14194    116 QILNGVYYLHSLQIAHFDLKPENIMLldrnVPKPRIKIIDFGLAHkidfGNEFKNIFGTPE-------FVAPEIVNyEPL 188
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1720423198  111 GsfvlvdqsRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFV 154
Cdd:cd14194    189 G--------LEADMWSIGVITYILLS-GASPFLGDTKQETLANV 223
STKc_DRAK cd14106
Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
1-129 9.94e-05

Catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs, also called STK17, were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2. Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. They may play a role in apoptotic signaling. The DRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271008 [Multi-domain]  Cd Length: 268  Bit Score: 45.42  E-value: 9.94e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLraqrPPEGMSPElppRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLT---VRIGDYG 77
Cdd:cd14106     87 LELAAGGELQTLL----DEEECLTE---ADVRRLMR---QILEGVQYLHERNIVHLDLKPQNILLTSEFPlgdIKLCDFG 156
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198   78 LA----HSNYKEDYYLTPErlwvplrWAAPELLgelhgSFVLVdqSRESNVWSLGV 129
Cdd:cd14106    157 ISrvigEGEEIREILGTPD-------YVAPEIL-----SYEPI--SLATDMWSIGV 198
STKc_Twitchin_like cd14114
The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs ...
40-156 9.99e-05

The catalytic domain of the Giant Serine/Threonine Kinases, Twitchin and Projectin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of Caenorhabditis elegans and Aplysia californica Twitchin, Drosophila melanogaster Projectin, and similar proteins. These are very large muscle proteins containing multiple immunoglobulin (Ig)-like and fibronectin type III (FN3) domains and a single kinase domain near the C-terminus. Twitchin and Projectin are both associated with thick filaments. Twitchin is localized in the outer parts of A-bands and is involved in regulating muscle contraction. It interacts with the myofibrillar proteins myosin and actin in a phosphorylation-dependent manner, and may be involved in regulating the myosin cross-bridge cycle. The kinase activity of Twitchen is activated by Ca2+ and the Ca2+ binding protein S100A1. Projectin is associated with the end of thick filaments and is a component of flight muscle connecting filaments. The kinase domain of Projectin may play roles in autophosphorylation and transphosphorylation, which impact the formation of myosin filaments. The Twitchin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271016 [Multi-domain]  Cd Length: 259  Bit Score: 45.65  E-value: 9.99e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRN--CLLTSDLTVRIGDYGLA-HSNYKEDYYLTPErlwvPLRWAAPELL-GELHGSFvl 115
Cdd:cd14114    108 QVCEGLCHMHENNIVHLDIKPENimCTTKRSNEVKLIDFGLAtHLDPKESVKVTTG----TAEFAAPEIVeREPVGFY-- 181
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  116 vdqsreSNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd14114    182 ------TDMWAVGVLSYVLLS-GLSPFAGENDDETLRNVKS 215
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
40-160 1.03e-04

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 45.76  E-value: 1.03e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNY-----KEDYYLTPErlwvplrWAAPELLG-ELHGSF 113
Cdd:cd05616    109 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIwdgvtTKTFCGTPD-------YIAPEIIAyQPYGKS 181
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1720423198  114 VlvdqsresNVWSLGVTLWELFEfGAQPYRHlSDEEVLAFVVRQQHV 160
Cdd:cd05616    182 V--------DWWAFGVLLYEMLA-GQAPFEG-EDEDELFQSIMEHNV 218
STKc_GRK cd05577
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs ...
40-143 1.07e-04

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. They contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7, which are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270729 [Multi-domain]  Cd Length: 278  Bit Score: 45.60  E-value: 1.07e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDYYLTpERLWVPlRWAAPELLGElhgsfvLVDQS 119
Cdd:cd05577    103 EIICGLEHLHNRFIVYRDLKPENILLDDHGHVRISDLGLA-VEFKGGKKIK-GRVGTH-GYMAPEVLQK------EVAYD 173
                           90       100
                   ....*....|....*....|....
gi 1720423198  120 RESNVWSLGVTLWELFEfGAQPYR 143
Cdd:cd05577    174 FSVDWFALGCMLYEMIA-GRSPFR 196
PLN00009 PLN00009
cyclin-dependent kinase A; Provisional
8-134 1.34e-04

cyclin-dependent kinase A; Provisional


Pssm-ID: 177649 [Multi-domain]  Cd Length: 294  Bit Score: 45.19  E-value: 1.34e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAqrppegmSPELPpRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT-SDLTVRIGDYGLAHSnyked 86
Cdd:PLN00009    86 DLKKHMDS-------SPDFA-KNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDrRTNALKLADFGLARA----- 152
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198   87 yYLTPERLW----VPLRWAAPE-LLGELHgsfvlvdQSRESNVWSLGVTLWEL 134
Cdd:PLN00009   153 -FGIPVRTFthevVTLWYRAPEiLLGSRH-------YSTPVDIWSVGCIFAEM 197
STKc_GRK5 cd05632
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs ...
40-143 1.35e-04

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270780 [Multi-domain]  Cd Length: 313  Bit Score: 45.35  E-value: 1.35e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyylTPERLWVPLR-----WAAPELLGELHGSFv 114
Cdd:cd05632    112 EILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVK--------IPEGESIRGRvgtvgYMAPEVLNNQRYTL- 182
                           90       100
                   ....*....|....*....|....*....
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFEfGAQPYR 143
Cdd:cd05632    183 ------SPDYWGLGCLIYEMIE-GQSPFR 204
PTZ00283 PTZ00283
serine/threonine protein kinase; Provisional
39-195 1.37e-04

serine/threonine protein kinase; Provisional


Pssm-ID: 240344 [Multi-domain]  Cd Length: 496  Bit Score: 46.02  E-value: 1.37e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA--HSNYKED----------YYLTPErLWVPLRWaapell 106
Cdd:PTZ00283   150 IQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSkmYAATVSDdvgrtfcgtpYYVAPE-IWRRKPY------ 222
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  107 gelhgsfvlvdqSRESNVWSLGVTLWELFEFgAQPYRHLSDEEVLAFVVRQQHVKLArPRLKLPYADYWYDILQScwrPP 186
Cdd:PTZ00283   223 ------------SKKADMFSLGVLLYELLTL-KRPFDGENMEEVMHKTLAGRYDPLP-PSISPEMQEIVTALLSS---DP 285

                   ....*....
gi 1720423198  187 AQRPSASDL 195
Cdd:PTZ00283   286 KRRPSSSKL 294
STKc_MSK_C cd14092
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
46-156 1.40e-04

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270994 [Multi-domain]  Cd Length: 311  Bit Score: 45.37  E-value: 1.40e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   46 AHLHSHNYVHSDLALRNCLLTS---DLTVRIGDYGLAHsnYKEDyyltPERLWVP---LRWAAPELLGELHGSfvlvDQS 119
Cdd:cd14092    113 SFMHSKGVVHRDLKPENLLFTDeddDAEIKIVDFGFAR--LKPE----NQPLKTPcftLPYAAPEVLKQALST----QGY 182
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1720423198  120 RES-NVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd14092    183 DEScDLWSLGVILYTMLS-GQVPFQSPSRNESAAEIMK 219
STKc_Trio_C cd14113
C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide ...
40-202 1.42e-04

C-terminal kinase domain of the Large Serine/Threonine Kinase and Rho Guanine Nucleotide Exchange Factor, Triple functional domain protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Triple functional domain protein (Trio), also called PTPRF-interacting protein, is a large multidomain protein containing a series of spectrin-like repeats, two each of RhoGEF and SH3 domains, an immunoglobulin-like (Ig) domain and a C-terminal kinase. Trio plays important roles in neuronal cell migration and axon guidance. It was originally identified as an interacting partner of the of the receptor-like tyrosine phosphatase (RPTP) LAR (leukocyte-antigen-related protein), a family of receptors that function in the signaling to the actin cytoskeleton during development. Trio functions as a GEF for Rac1, RhoG, and RhoA, and is involved in the regulation of lamellipodia formation, mediating Rac1-dependent cell spreading and migration. The Trio subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271015 [Multi-domain]  Cd Length: 263  Bit Score: 44.97  E-value: 1.42e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDL---TVRIGDYGLAhSNYKEDYYLTPerLWVPLRWAAPELlgeLHGSFVlv 116
Cdd:cd14113    111 EILEALQYLHNCRIAHLDLKPENILVDQSLskpTIKLADFGDA-VQLNTTYYIHQ--LLGSPEFAAPEI---ILGNPV-- 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  117 dqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLafvvrqqhVKLARPRLKLPyADYWYDILQS-----CW---RPPAQ 188
Cdd:cd14113    183 --SLTSDLWSIGVLTYVLLS-GVSPFLDESVEETC--------LNICRLDFSFP-DDYFKGVSQKakdfvCFllqMDPAK 250
                          170
                   ....*....|....
gi 1720423198  189 RPSASdLQLQLTYL 202
Cdd:cd14113    251 RPSAA-LCLQEQWL 263
STKc_Kin4 cd14076
Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the ...
1-142 1.63e-04

Catalytic domain of the yeast Serine/Threonine Kinase, Kin4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Kin4 is a central component of the spindle position checkpoint (SPOC), which monitors spindle position and regulates the mitotic exit network (MEN). Kin4 associates with spindle pole bodies in mother cells to inhibit MEN signaling and delay mitosis until the anaphase nucleus is properly positioned along the mother-bud axis. Kin4 activity is regulated by both the bud neck-associated kinase Elm1 and protein phosphatase 2A. The Kin4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270978 [Multi-domain]  Cd Length: 270  Bit Score: 44.78  E-value: 1.63e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPelpprdlrtlQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd14076     85 LEFVSGGELFDYILARRRLKDSVA----------CRLFAQLISGVAYLHKKGVVHRDLKLENLLLDKNRNLVITDFGFAN 154
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   81 SNYKEDYYLTPERLWVPLrWAAPELlgelhgsfVLVD---QSRESNVWSLGVTLWELFEfGAQPY 142
Cdd:cd14076    155 TFDHFNGDLMSTSCGSPC-YAAPEL--------VVSDsmyAGRKADIWSCGVILYAMLA-GYLPF 209
STKc_JNK2 cd07876
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the ...
44-134 1.64e-04

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK2 is expressed in every cell and tissue type. It is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143381 [Multi-domain]  Cd Length: 359  Bit Score: 45.40  E-value: 1.64e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNyKEDYYLTPerlWVPLR-WAAPEllgelhgsfVLVDQSRES 122
Cdd:cd07876    135 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-CTNFMMTP---YVVTRyYRAPE---------VILGMGYKE 201
                           90
                   ....*....|....
gi 1720423198  123 NV--WSLGVTLWEL 134
Cdd:cd07876    202 NVdiWSVGCIMGEL 215
STKc_PAK4 cd06657
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the ...
39-195 1.75e-04

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. PAK4 belongs to the group II PAKs, which contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132988 [Multi-domain]  Cd Length: 292  Bit Score: 45.01  E-value: 1.75e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEdyylTPER--LWVPLRWAAPELLGELhgsfvlv 116
Cdd:cd06657    123 LAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRksLVGTPYWMAPELISRL------- 191
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198  117 DQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLPYADYWYDILQScwRPPAQRPSASDL 195
Cdd:cd06657    192 PYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLV--RDPAQRATAAEL 267
STKc_aPKC_zeta cd05617
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze ...
1-164 1.76e-04

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC-zeta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270768 [Multi-domain]  Cd Length: 357  Bit Score: 45.40  E-value: 1.76e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTlqrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05617     95 IEYVNGGDLMFHMQRQR-------KLPEEHARF---YAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYK-----EDYYLTPErlwvplrWAAPELL-GELHGSFVlvdqsresNVWSLGVTLWELFEfGAQPYRHLSD------E 148
Cdd:cd05617    165 EGLGpgdttSTFCGTPN-------YIAPEILrGEEYGFSV--------DWWALGVLMFEMMA-GRSPFDIITDnpdmntE 228
                          170
                   ....*....|....*.
gi 1720423198  149 EVLAFVVRQQHVKLAR 164
Cdd:cd05617    229 DYLFQVILEKPIRIPR 244
STKc_SGK3 cd05604
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
40-142 1.79e-04

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK3 (also called cytokine-independent survival kinase or CISK) is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. The SGK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270755 [Multi-domain]  Cd Length: 326  Bit Score: 44.95  E-value: 1.79e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-----AHSNYKEDYYLTPERLwvplrwaAPEllgelhgsfV 114
Cdd:cd05604    105 EIASALGYLHSINIVYRDLKPENILLDSQGHIVLTDFGLckegiSNSDTTTTFCGTPEYL-------APE---------V 168
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  115 LVDQSRESNV--WSLGVTLWELFeFGAQPY 142
Cdd:cd05604    169 IRKQPYDNTVdwWCLGSVLYEML-YGLPPF 197
STKc_MEKK1 cd06630
Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP) ...
39-195 1.91e-04

Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK1 is a MAPK kinase kinase (MAPKKK or MKKK) that phosphorylates and activates activates the ERK1/2 and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270800 [Multi-domain]  Cd Length: 268  Bit Score: 44.73  E-value: 1.91e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLT-VRIGDYGLAhSNYKEDYYLTPE---RLWVPLRWAAPELL-GELHGsf 113
Cdd:cd06630    110 LQILRGLAYLHDNQIIHRDLKGANLLVDSTGQrLRIADFGAA-ARLASKGTGAGEfqgQLLGTIAFMAPEVLrGEQYG-- 186
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  114 vlvdqsRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR----------QQHVklaRPRLKlpyadywyDILQSCW 183
Cdd:cd06630    187 ------RSCDVWSVGCVIIEMAT-AKPPWNAEKISNHLALIFKiasattpppiPEHL---SPGLR--------DVTLRCL 248
                          170
                   ....*....|...
gi 1720423198  184 RP-PAQRPSASDL 195
Cdd:cd06630    249 ELqPEDRPPAREL 261
STKc_GRK6 cd05630
Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs ...
40-150 2.00e-04

Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK6 is widely expressed in many tissues and is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The GRK6 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270779 [Multi-domain]  Cd Length: 285  Bit Score: 44.63  E-value: 2.00e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-HsnykedyylTPERLWVPLR-----WAAPELLGELHGSF 113
Cdd:cd05630    110 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAvH---------VPEGQTIKGRvgtvgYMAPEVVKNERYTF 180
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  114 vlvdqsrESNVWSLGVTLWELFEfGAQPY----RHLSDEEV 150
Cdd:cd05630    181 -------SPDWWALGCLLYEMIA-GQSPFqqrkKKIKREEV 213
PK_TRB3 cd14024
Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein ...
7-198 2.01e-04

Pseudokinase domain of Tribbles Homolog 3; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. TRB3 binds and regulates ATF4, p65/RelA, and PKB (or Akt). It negatively regulates ATF4-mediated gene expression including that of CHOP (C/EBP homologous protein) and HO-1, which are both involved in modulating apoptosis. It also inhibits insulin-mediated phosphorylation of PKB and is a possible determinant of insulin resistance and related disorders. In osteoarthritic chondrocytes where it inhibits insulin-like growth factor 1-mediated cell survival, TRB3 is overexpressed, resulting in increased cell death. TRB3 is one of three Tribbles Homolog (TRB) proteins present in vertebrates that are encoded by three separate genes. TRB proteins interact with many proteins involved in signalling pathways. They play scaffold-like regulatory functions and affect many cellular processes such as mitosis, apoptosis, and gene expression. The TRB3 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270926 [Multi-domain]  Cd Length: 242  Bit Score: 44.48  E-value: 2.01e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    7 GDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS---NY 83
Cdd:cd14024     69 GDMHSHVRRRR-------RLSEDEARGLFT---QMARAVAHCHQHGVILRDLKLRRFVFTDELRTKLVLVNLEDScplNG 138
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   84 KEDyYLTpERLWVPlRWAAPELLGELHGSfvlvdQSRESNVWSLGVTLWELFeFGAQPYRhlsDEEVLAFVVRQQHVKLA 163
Cdd:cd14024    139 DDD-SLT-DKHGCP-AYVGPEILSSRRSY-----SGKAADVWSLGVCLYTML-LGRYPFQ---DTEPAALFAKIRRGAFS 206
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1720423198  164 RPRLKLPYAdywyDILQSCW--RPPAQRPSASDLQLQ 198
Cdd:cd14024    207 LPAWLSPGA----RCLVSCMlrRSPAERLKASEILLH 239
STKc_Nek8 cd08220
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
1-134 2.03e-04

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Nek8 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270859 [Multi-domain]  Cd Length: 256  Bit Score: 44.34  E-value: 2.03e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRaQRPPEGMSPElpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLT-VRIGDYGLA 79
Cdd:cd08220     78 MEYAPGGTLFEYIQ-QRKGSLLSEE-------EILHFFVQILLALHHVHSKQILHRDLKTQNILLNKKRTvVKIGDFGIS 149
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   80 HS-NYKEDYYL---TPERLwvplrwaAPELlgeLHGSfvlvDQSRESNVWSLGVTLWEL 134
Cdd:cd08220    150 KIlSSKSKAYTvvgTPCYI-------SPEL---CEGK----PYNQKSDIWALGCVLYEL 194
STKc_CDK1_euk cd07861
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher ...
2-134 2.28e-04

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis as well as neuronal apoptosis in neurodegenerative diseases. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270845 [Multi-domain]  Cd Length: 285  Bit Score: 44.72  E-value: 2.28e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLgDLKRYLRAQRPPEGMSPELpprdlrtLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd07861     79 EFLSM-DLKKYLDSLPKGKYMDAEL-------VKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARA 150
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 nykedyYLTPERLW----VPLRWAAPEllgelhgsfVLVDQSRES---NVWSLGVTLWEL 134
Cdd:cd07861    151 ------FGIPVRVYthevVTLWYRAPE---------VLLGSPRYStpvDIWSIGTIFAEM 195
STKc_DCKL3 cd14185
Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called ...
37-178 2.32e-04

Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 3 (also called Doublecortin-like and CAM kinase-like 3); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DCKL3 (or DCAMKL3) belongs to the doublecortin (DCX) family of proteins which are involved in neuronal migration, neurogenesis, and eye receptor development, among others. Family members typically contain tandem doublecortin (DCX) domains at the N-terminus; DCX domains can bind microtubules and serve as protein-interaction platforms. DCKL3 contains a single DCX domain (instead of a tandem) and a C-terminal kinase domain with similarity to CAMKs. It has been shown to interact with tubulin and JIP1/2. The DCKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271087 [Multi-domain]  Cd Length: 258  Bit Score: 44.17  E-value: 2.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   37 MGLEIARGLAHLHSHNYVHSDLALRNCLLTSD----LTVRIGDYGLAHSNYKEDYYL--TPErlwvplrWAAPELLGElH 110
Cdd:cd14185    103 MIIDLCEALVYIHSKHIVHRDLKPENLLVQHNpdksTTLKLADFGLAKYVTGPIFTVcgTPT-------YVAPEILSE-K 174
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198  111 GSFVLVDqsresnVWSLGVTLWELFeFGAQPYRHLS-DEEVLAFVVRQQHVKLARPrlklpyadYWYDI 178
Cdd:cd14185    175 GYGLEVD------MWAAGVILYILL-CGFPPFRSPErDQEELFQIIQLGHYEFLPP--------YWDNI 228
STKc_MLCK3 cd14192
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze ...
40-155 2.34e-04

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK3 (or MYLK3) phosphorylates myosin regulatory light chain 2 and controls the contraction of cardiac muscles. It is expressed specifically in both the atrium and ventricle of the heart and its expression is regulated by the cardiac protein Nkx2-5. MLCK3 plays an important role in cardiogenesis by regulating the assembly of cardiac sarcomeres, the repeating contractile unit of striated muscle. MLCK3 contains a single kinase domain near the C-terminus and a unique N-terminal half, and unlike MLCK1/2, it does not appear to be regulated by Ca2+/calmodulin. The MLCK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271094 [Multi-domain]  Cd Length: 261  Bit Score: 44.18  E-value: 2.34e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRN--CLLTSDLTVRIGDYGLAHsNYKEDYYL-----TPERLwvplrwaAPELlgeLHGS 112
Cdd:cd14192    110 QICEGVHYLHQHYILHLDLKPENilCVNSTGNQIKIIDFGLAR-RYKPREKLkvnfgTPEFL-------APEV---VNYD 178
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  113 FVlvdqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd14192    179 FV----SFPTDMWSVGVITYMLLS-GLSPFLGETDAETMNNIV 216
STKc_MEKK3_like_u1 cd06653
Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP) ...
40-195 2.35e-04

Catalytic domain of an Uncharacterized subfamily of Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of uncharacterized proteins with similarity to MEKK3, MEKK2, and related proteins; they contain an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are MAPK kinase kinases (MAPKKKs or MKKKs), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270819 [Multi-domain]  Cd Length: 264  Bit Score: 44.25  E-value: 2.35e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLahSNYKEDYYLTPERL----WVPLrWAAPELL-GELHGsfv 114
Cdd:cd06653    114 QILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGA--SKRIQTICMSGTGIksvtGTPY-WMSPEVIsGEGYG--- 187
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsRESNVWSLGVTLWELFEfGAQPYrhlSDEEVLA--FVVRQQHVKlarPRLKLPYADYWYDILQSCWRPPAQRPSA 192
Cdd:cd06653    188 -----RKADVWSVACTVVEMLT-EKPPW---AEYEAMAaiFKIATQPTK---PQLPDGVSDACRDFLRQIFVEEKRRPTA 255

                   ...
gi 1720423198  193 SDL 195
Cdd:cd06653    256 EFL 258
PKc_DYRK_like cd14133
Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like ...
30-135 2.36e-04

Catalytic domain of Dual-specificity tYrosine-phosphorylated and -Regulated Kinase-like protein kinases; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (S/T) as well as tyrosine residues on protein substrates. This subfamily is composed of the dual-specificity DYRKs and YAK1, as well as the S/T kinases (STKs), HIPKs. DYRKs and YAK1 autophosphorylate themselves on tyrosine residues and phosphorylate their substrates exclusively on S/T residues. Proteins in this subfamily play important roles in cell proliferation, differentiation, survival, growth, and development. The DYRK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271035 [Multi-domain]  Cd Length: 262  Bit Score: 44.18  E-value: 2.36e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT--SDLTVRIGDYGLAHSNYKEDYYLTPERLWvplRwaAPE-LL 106
Cdd:cd14133    100 SLPRIRKIAQQILEALVFLHSLGLIHCDLKPENILLAsySRCQIKIIDFGSSCFLTQRLYSYIQSRYY---R--APEvIL 174
                           90       100
                   ....*....|....*....|....*....
gi 1720423198  107 GELHGSFVlvdqsresNVWSLGVTLWELF 135
Cdd:cd14133    175 GLPYDEKI--------DMWSLGCILAELY 195
STKc_MSK1_C cd14179
C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated ...
40-151 2.42e-04

C-terminal catalytic domain of the Serine/Threonine Kinase, Mitogen and stress-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MSK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. The MSK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271081 [Multi-domain]  Cd Length: 310  Bit Score: 44.65  E-value: 2.42e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSD---LTVRIGDYGLAHSNYKEDYYL-TPerlWVPLRWAAPELLGElHGsfvl 115
Cdd:cd14179    110 KLVSAVSHMHDVGVVHRDLKPENLLFTDEsdnSEIKIIDFGFARLKPPDNQPLkTP---CFTLHYAAPELLNY-NG---- 181
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1720423198  116 VDQSreSNVWSLGVTLWELFEfGAQPYR-------HLSDEEVL 151
Cdd:cd14179    182 YDES--CDLWSLGVILYTMLS-GQVPFQchdksltCTSAEEIM 221
STKc_PIM cd14005
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
47-191 2.54e-04

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 and three PIM2 isoforms as a result of alternative translation initiation sites, while there is only one PIM3 protein. Compound knockout mice deficient of all three PIM kinases that survive the perinatal period show a profound reduction in body size, indicating that PIMs are important for body growth. The PIM subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270907 [Multi-domain]  Cd Length: 255  Bit Score: 44.15  E-value: 2.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   47 HLHSHNYVHSDLALRNCLLTSD-LTVRIGDYGLAH----SNYKeDYYLTPErlwvplrWAAPELLgeLHGSFvlvdQSRE 121
Cdd:cd14005    122 HCHQRGVLHRDIKDENLLINLRtGEVKLIDFGCGAllkdSVYT-DFDGTRV-------YSPPEWI--RHGRY----HGRP 187
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  122 SNVWSLGVTLWELFeFGAQPYRHlsDEEVLAFVVrqqhvkLARPRLklpyADYWYDILQSCWRP-PAQRPS 191
Cdd:cd14005    188 ATVWSLGILLYDML-CGDIPFEN--DEQILRGNV------LFRPRL----SKECCDLISRCLQFdPSKRPS 245
STKc_YPK1_like cd05585
Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the ...
40-142 2.67e-04

Catalytic domain of Yeast Protein Kinase 1-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270737 [Multi-domain]  Cd Length: 313  Bit Score: 44.48  E-value: 2.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPERLwvplrwaAPELLGElHGSFV 114
Cdd:cd05585    102 ELLCALECLHKFNVIYRDLKPENILLDYTGHIALCDFGLCKLNMKDDdktntFCGTPEYL-------APELLLG-HGYTK 173
                           90       100
                   ....*....|....*....|....*...
gi 1720423198  115 LVDQsresnvWSLGVTLWELFEfGAQPY 142
Cdd:cd05585    174 AVDW------WTLGVLLYEMLT-GLPPF 194
STKc_PAK_I cd06647
Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze ...
40-202 2.85e-04

Catalytic domain of the Serine/Threonine Kinase, Group I p21-activated kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270814 [Multi-domain]  Cd Length: 261  Bit Score: 44.15  E-value: 2.85e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPER------LWVPLrWAAPELLG-ELHGS 112
Cdd:cd06647    111 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-------ITPEQskrstmVGTPY-WMAPEVVTrKAYGP 182
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  113 FVlvdqsresNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARP-RLKLPYADYwydiLQSCWRPPAQ-RP 190
Cdd:cd06647    183 KV--------DIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPeKLSAIFRDF----LNRCLEMDVEkRG 249
                          170
                   ....*....|..
gi 1720423198  191 SASDLqLQLTYL 202
Cdd:cd06647    250 SAKEL-LQHPFL 260
STKc_MAP3K8 cd13995
Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) ...
40-195 3.15e-04

Catalytic domain of the Serine/Threonine kinase, Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase 8; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP3K8 is also called Tumor progression locus 2 (Tpl2) or Cancer Osaka thyroid (Cot), and was first identified as a proto-oncogene in T-cell lymphoma induced by MoMuL virus and in breast carcinoma induced by MMTV. Activated MAP3K8 induces various MAPK pathways including Extracellular Regulated Kinase (ERK) 1/2, c-Jun N-terminal kinase (JNK), and p38. It plays a pivotal role in innate immunity, linking Toll-like receptors to the production of TNF and the activation of ERK in macrophages. It is also required in interleukin-1beta production and is critical in host defense against Gram-positive bacteria. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The MAP3K8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270897 [Multi-domain]  Cd Length: 256  Bit Score: 43.84  E-value: 3.15e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIgDYGLAhSNYKEDYYLtPERLWVPLRWAAPELLgelhgsfVLVDQS 119
Cdd:cd13995    104 HVLKGLDFLHSKNIIHHDIKPSNIVFMSTKAVLV-DFGLS-VQMTEDVYV-PKDLRGTEIYMSPEVI-------LCRGHN 173
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  120 RESNVWSLGVTLWELfEFGAQPYrhlsdeevlafvVRQQhvklarPRLKLPyaDYWY----------DILQSCW------ 183
Cdd:cd13995    174 TKADIYSLGATIIHM-QTGSPPW------------VRRY------PRSAYP--SYLYiihkqappleDIAQDCSpamrel 232
                          170
                   ....*....|....*...
gi 1720423198  184 ------RPPAQRPSASDL 195
Cdd:cd13995    233 leaaleRNPNHRSSAAEL 250
PHA03209 PHA03209
serine/threonine kinase US3; Provisional
8-137 3.17e-04

serine/threonine kinase US3; Provisional


Pssm-ID: 177557 [Multi-domain]  Cd Length: 357  Bit Score: 44.48  E-value: 3.17e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQRPPegmspeLPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDY 87
Cdd:PHA03209   142 DLYTYLTKRSRP------LPIDQALIIEK---QILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA 212
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198   88 YLTperLWVPLRWAAPELLGElhgsfvlVDQSRESNVWSLGVTLWELFEF 137
Cdd:PHA03209   213 FLG---LAGTVETNAPEVLAR-------DKYNSKADIWSAGIVLFEMLAY 252
STKc_SGK cd05575
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; ...
40-142 3.19e-04

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270727 [Multi-domain]  Cd Length: 323  Bit Score: 44.23  E-value: 3.19e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-----AHSNYKEDYYLTPERLwvplrwaAPEllgelhgsfV 114
Cdd:cd05575    104 EIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLckegiEPSDTTSTFCGTPEYL-------APE---------V 167
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  115 LVDQSRESNV--WSLGVTLWELFeFGAQPY 142
Cdd:cd05575    168 LRKQPYDRTVdwWCLGAVLYEML-YGLPPF 196
STKc_ACVR2a cd14141
Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the ...
41-192 3.32e-04

Catalytic domain of the Serine/Threonine Kinase, Activin Type IIA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ACVR2a (or ActRIIA) belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, bone morphogenetic proteins (BMPs), activins, growth and differentiation factors (GDFs), and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane region, and a cytoplasmic catalytic kinase domain. ACVR2b is one of two ACVR2 receptors found in vertebrates. Type II receptors are high-affinity receptors which bind ligands, autophosphorylate, as well as trans-phosphorylate and activate low-affinity type I receptors. ACVR2 acts primarily as the receptors for activins, nodal, myostatin, GDF11, and a subset of BMPs. ACVR2 signaling impacts many cellular and physiological processes including reproductive and gonadal functions, myogenesis, bone remodeling and tooth development, kidney organogenesis, apoptosis, fibrosis, inflammation, and neurogenesis. The ACVR2a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271043 [Multi-domain]  Cd Length: 290  Bit Score: 44.26  E-value: 3.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   41 IARGLAHLHS--------HN--YVHSDLALRNCLLTSDLTVRIGDYGLA------------HSNYKEDYYLTPERLWVPL 98
Cdd:cd14141    101 MARGLAYLHEdipglkdgHKpaIAHRDIKSKNVLLKNNLTACIADFGLAlkfeagksagdtHGQVGTRRYMAPEVLEGAI 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   99 RWAapellgelHGSFVLVDqsresnVWSLGVTLWEL---------------FEFGAQPYRHLSDEEVLAFVVrqqHVKLa 163
Cdd:cd14141    181 NFQ--------RDAFLRID------MYAMGLVLWELasrctasdgpvdeymLPFEEEVGQHPSLEDMQEVVV---HKKK- 242
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1720423198  164 RPRLKlpyaDYWY---------DILQSCWRPPAQ-RPSA 192
Cdd:cd14141    243 RPVLR----ECWQkhagmamlcETIEECWDHDAEaRLSA 277
STKc_MAP4K3 cd06645
Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase ...
1-195 3.43e-04

Catalytic domain of the Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. MAP4Ks are involved in MAPK signaling pathways by activating a MAPK kinase kinase. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270812 [Multi-domain]  Cd Length: 272  Bit Score: 43.88  E-value: 3.43e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPELPPRDlrTLQrmgleiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL-- 78
Cdd:cd06645     87 MEFCGGGSLQDIYHVTGPLSESQIAYVSRE--TLQ--------GLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVsa 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 ---AHSNYKEDYYLTPerlwvplRWAAPELLG-ELHGSFvlvdqSRESNVWSLGVTLWELFE-----FGAQPYRHLsdee 149
Cdd:cd06645    157 qitATIAKRKSFIGTP-------YWMAPEVAAvERKGGY-----NQLCDIWAVGITAIELAElqppmFDLHPMRAL---- 220
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1720423198  150 vlaFVVRQQHVKLARPRLKLPYADYWYDILQ-SCWRPPAQRPSASDL 195
Cdd:cd06645    221 ---FLMTKSNFQPPKLKDKMKWSNSFHHFVKmALTKNPKKRPTAEKL 264
STKc_WNK4 cd14033
Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze ...
2-134 3.80e-04

Catalytic domain of the Serine/Threonine protein kinase, With No Lysine (WNK) 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. WNK4 shows a restricted expression pattern and is usually found in epithelial cells. It is expressed in nephrons and in extrarenal tissues including intestine, eye, mammary glands, and prostate. WNK4 regulates a variety of ion transport proteins including apical or basolateral ion transporters, ion channels in the transcellular pathway, and claudins in the paracellular pathway. Mutations in WNK4 cause PseudoHypoAldosteronism type II (PHAII), characterized by hypertension and hyperkalemia. WNK4 inhibits the activity of the thiazide-sensitive Na-Cl cotransporter (NCC), which is responsible for about 15% of NaCl reabsorption in the kidney. It also inhibits the renal outer medullary potassium channel (ROMK) and decreases its surface expression. Hypertension and hyperkalemia in PHAII patients with WNK4 mutations may be partly due to increased NaCl reabsorption through NCC and impaired renal potassium secretion by ROMK, respectively. The WNK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270935 [Multi-domain]  Cd Length: 261  Bit Score: 43.84  E-value: 3.80e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQLGDLKRYLRAQRPPEgmspelpprdLRTLQRMGLEIARGLAHLHSHN--YVHSDLALRNCLLTSDL-TVRIGDYGL 78
Cdd:cd14033     84 ELMTSGTLKTYLKRFREMK----------LKLLQRWSRQILKGLHFLHSRCppILHRDLKCDNIFITGPTgSVKIGDLGL 153
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   79 A---HSNYKEDYYLTPErlwvplrWAAPELLGELHGSFVlvdqsresNVWSLGVTLWEL 134
Cdd:cd14033    154 AtlkRASFAKSVIGTPE-------FMAPEMYEEKYDEAV--------DVYAFGMCILEM 197
STKc_TSSK3-like cd14163
Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs ...
1-135 3.98e-04

Catalytic domain of testis-specific serine/threonine kinase 3 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TSSK proteins are almost exclusively expressed postmeiotically in the testis and play important roles in spermatogenesis and/or spermiogenesis. There are five mammalian TSSK proteins which show differences in their localization and timing of expression. TSSK3 has been reported to be expressed in the interstitial Leydig cells of adult testis. Its mRNA levels is low at birth, increases at puberty, and remains high throughout adulthood. The TSSK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271065 [Multi-domain]  Cd Length: 257  Bit Score: 43.44  E-value: 3.98e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspeLPPRDLRTLQRMGLEIARglaHLHSHNYVHSDLALRNCLLTSdLTVRIGDYGLAH 80
Cdd:cd14163     80 MELAEDGDVFDCVLHGGP-------LPEHRAKALFRQLVEAIR---YCHGCGVAHRDLKCENALLQG-FTLKLTDFGFAK 148
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198   81 SNYKEDYYLTpERLWVPLRWAAPELL-GELHgsfvlvdQSRESNVWSLGVTLWELF 135
Cdd:cd14163    149 QLPKGGRELS-QTFCGSTAYAAPEVLqGVPH-------DSRKGDIWSMGVVLYVML 196
Bud32 COG3642
tRNA A-37 threonylcarbamoyl transferase component Bud32 [Translation, ribosomal structure and ...
1-87 4.12e-04

tRNA A-37 threonylcarbamoyl transferase component Bud32 [Translation, ribosomal structure and biogenesis]; tRNA A-37 threonylcarbamoyl transferase component Bud32 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442859 [Multi-domain]  Cd Length: 159  Bit Score: 42.25  E-value: 4.12e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppegmspELPPRDLRtlqrmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIgDYGLA- 79
Cdd:COG3642     35 MEYIEGETLADLLEEG--------ELPPELLR-------ELGRLLARLHRAGIVHGDLTTSNILVDDGGVYLI-DFGLAr 98

                   ....*...
gi 1720423198   80 HSNYKEDY 87
Cdd:COG3642     99 YSDPLEDK 106
STKc_SnRK3 cd14663
Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein ...
43-134 4.31e-04

Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SnRKs form three different subfamilies designated SnRK1-3. SnRK3 is represented in this cd. The SnRK3 group contains members also known as CBL-interacting protein kinase, salt overly sensitive 2, SOS3-interacting proteins and protein kinase S. These kinases interact with calcium-binding proteins such as SOS3, SCaBPs, and CBL proteins, and are involved in responses to salt stress and in sugar and ABA signaling. The SnRKs belong to a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271133 [Multi-domain]  Cd Length: 256  Bit Score: 43.55  E-value: 4.31e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   43 RGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA--HSNYKEDYYL-----TPErlwvplrWAAPEllgelhgsfVL 115
Cdd:cd14663    111 DAVDYCHSRGVFHRDLKPENLLLDEDGNLKISDFGLSalSEQFRQDGLLhttcgTPN-------YVAPE---------VL 174
                           90       100
                   ....*....|....*....|..
gi 1720423198  116 VDQSRE---SNVWSLGVTLWEL 134
Cdd:cd14663    175 ARRGYDgakADIWSCGVILFVL 196
STKc_SGK1 cd05602
Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced ...
40-142 4.79e-04

Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. The SGK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270753 [Multi-domain]  Cd Length: 339  Bit Score: 43.85  E-value: 4.79e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPERLwvplrwaAPELLGELhgsfv 114
Cdd:cd05602    116 EIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEPNgttstFCGTPEYL-------APEVLHKQ----- 183
                           90       100
                   ....*....|....*....|....*...
gi 1720423198  115 lvDQSRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd05602    184 --PYDRTVDWWCLGAVLYEML-YGLPPF 208
STKc_JNK1 cd07875
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the ...
44-138 4.88e-04

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK1 is expressed in every cell and tissue type. It specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in JNK1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Initially, it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNKs are mitogen-activated protein kinases that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143380 [Multi-domain]  Cd Length: 364  Bit Score: 43.88  E-value: 4.88e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNyKEDYYLTPERlwVPLRWAAPEllgelhgsfVLVDQSRESN 123
Cdd:cd07875    138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYV--VTRYYRAPE---------VILGMGYKEN 205
                           90
                   ....*....|....*..
gi 1720423198  124 V--WSLGVTLWELFEFG 138
Cdd:cd07875    206 VdiWSVGCIMGEMIKGG 222
STKc_BMPR1a cd14220
Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; ...
30-134 4.92e-04

Catalytic domain of the Serine/Threonine Kinase, Bone Morphogenetic Protein Type IA Receptor; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BMPR1a, also called Activin receptor-Like Kinase 3 (ALK3), functions as a receptor for bone morphogenetic proteins (BMPs), which are involved in the regulation of cell proliferation, survival, differentiation, and apoptosis. BMPs are able to induce bone, cartilage, ligament, and tendon formation, and may play roles in bone diseases and tumors. Germline mutations in BMPR1a are associated with an increased risk to Juvenile Polyposis Syndrome, a hamartomatous disorder that may lead to gastrointestinal cancer. BMPR1a may also play an indirect role in the development of hematopoietic stem cells (HSCs) as osteoblasts are a major component of the HSC niche within the bone marrow. BMPR1a belongs to a group of receptors for the TGFbeta family of secreted signaling molecules that includes TGFbeta, BMPs, activins, growth and differentiation factors, and anti-Mullerian hormone, among others. These receptors contain an extracellular domain that binds ligands, a single transmembrane (TM) region, and a cytoplasmic catalytic kinase domain. Type I receptors, like BMPR1a, are low-affinity receptors that bind ligands only after they are recruited by the ligand/type II high-affinity receptor complex. Following activation, they start intracellular signaling to the nucleus by phosphorylating SMAD proteins. Type I receptors contain an additional domain located between the TM and kinase domains called the GS domain, which contains the activating phosphorylation site and confers preference for specific SMAD proteins. The BMPR1a subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271122 [Multi-domain]  Cd Length: 287  Bit Score: 43.49  E-value: 4.92e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNY--------VHSDLALRNCLLTSDLTVRIGDYGLAhSNYKEDyyltPERLWVPL--- 98
Cdd:cd14220     90 DTRALLKLAYSAACGLCHLHTEIYgtqgkpaiAHRDLKSKNILIKKNGTCCIADLGLA-VKFNSD----TNEVDVPLntr 164
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 1720423198   99 ----RWAAPELLGEL-----HGSFVLVDqsresnVWSLGVTLWEL 134
Cdd:cd14220    165 vgtkRYMAPEVLDESlnknhFQAYIMAD------IYSFGLIIWEM 203
STKc_VRK cd14015
Catalytic domain of the Serine/Threonine protein kinase, Vaccinia Related Kinase; STKs ...
31-86 5.18e-04

Catalytic domain of the Serine/Threonine protein kinase, Vaccinia Related Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. VRKs were initially discovered due to its similarity to vaccinia virus B1R STK, which is important for viral replication. They play important roles in cell signaling, nuclear envelope dynamics, apoptosis, and stress responses. Vertebrates contain three VRK proteins (VRK1, VRK2, and VRK3) while invertebrates, specifically fruit flies and nematodes, seem to carry only a single ortholog. Mutations of VRK in Drosophila and Caenorhabditis elegans showed varying phenotypes ranging from embryonic lethality to mitotic and meiotic defects resulting in sterility. In vertebrates, VRK1 is implicated in cell cycle progression and proliferation, nuclear envelope assembly, and chromatin condensation. VRK2 is involved in modulating JNK signaling. VRK3 is an inactive pseudokinase that inhibits ERK signaling. The VRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270917 [Multi-domain]  Cd Length: 300  Bit Score: 43.42  E-value: 5.18e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720423198   31 LRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLT---VRIGDYGLA--------HSNYKED 86
Cdd:cd14015    126 EKTVLQLALRILDVLEYIHENGYVHADIKASNLLLGFGKNkdqVYLVDYGLAsrycpngkHKEYKED 192
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
40-194 5.34e-04

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 43.34  E-value: 5.34e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDL--TVRIGDYGLAH----SNYKEDYYLTPErlwvplrWAAPELlgeLHGSF 113
Cdd:cd14107    106 QVLEGIGYLHGMNILHLDIKPDNILMVSPTreDIKICDFGFAQeitpSEHQFSKYGSPE-------FVAPEI---VHQEP 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  114 VlvdqSRESNVWSLGVTLWeLFEFGAQPYRHLSDEEVLAFVVRQQhVKLARP---RLKLPYADYWYDILQscwRPPAQRP 190
Cdd:cd14107    176 V----SAATDIWALGVIAY-LSLTCHSPFAGENDRATLLNVAEGV-VSWDTPeitHLSEDAKDFIKRVLQ---PDPEKRP 246

                   ....
gi 1720423198  191 SASD 194
Cdd:cd14107    247 SASE 250
STKc_Pho85 cd07836
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; ...
2-196 5.39e-04

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Pho85 is a multifunctional CDK in yeast. It is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143341 [Multi-domain]  Cd Length: 284  Bit Score: 43.24  E-value: 5.39e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQlGDLKRYLRAQRPPEGMspelpprDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS 81
Cdd:cd07836     78 EYMD-KDLKKYMDTHGVRGAL-------DPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARA 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   82 -----NYKEDYYLTperLWvplrWAAPELlgeLHGSFVLvdqSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVR 156
Cdd:cd07836    150 fgipvNTFSNEVVT---LW----YRAPDV---LLGSRTY---STSIDIWSVGCIMAEMIT-GRPLFPGTNNEDQLLKIFR 215
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1720423198  157 QqhvklarprLKLPYADYWYDILQSC-WRPPAQRPSASDLQ 196
Cdd:cd07836    216 I---------MGTPTESTWPGISQLPeYKPTFPRYPPQDLQ 247
STKc_IKK_beta cd14038
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
1-142 5.60e-04

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IKKbeta is involved in the classical pathway of regulating Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. The classical pathway regulates the majority of genes activated by NF-kB including those encoding cytokines, chemokines, leukocyte adhesion molecules, and anti-apoptotic factors. It involves NEMO (NF-kB Essential MOdulator)- and IKKbeta-dependent phosphorylation and degradation of the Inhibitor of NF-kB (IkB), which liberates NF-kB dimers (typified by the p50-p65 heterodimer) from an inactive IkB/dimeric NF-kB complex, enabling them to migrate to the nucleus where they regulate gene transcription. The IKKbeta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270940 [Multi-domain]  Cd Length: 290  Bit Score: 43.41  E-value: 5.60e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSPElpprDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSD---LTVRIGDYG 77
Cdd:cd14038     77 MEYCQGGDLRKYLNQFENCCGLREG----AILTLLS---DISSALRYLHENRIIHRDLKPENIVLQQGeqrLIHKIIDLG 149
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720423198   78 LAhsnyKE-DYYLTPERLWVPLRWAAPELLgELHGSFVLVDqsresnVWSLGVTLWELFEfGAQPY 142
Cdd:cd14038    150 YA----KElDQGSLCTSFVGTLQYLAPELL-EQQKYTVTVD------YWSFGTLAFECIT-GFRPF 203
STKc_aPKC_iota cd05618
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze ...
1-142 5.65e-04

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C iota; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270769 [Multi-domain]  Cd Length: 364  Bit Score: 43.87  E-value: 5.65e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05618    100 IEYVNGGDLMFHMQRQR-------KLPEEHARFYSA---EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198   81 SNYK-----EDYYLTPErlwvplrWAAPELL-GELHGSFVlvdqsresNVWSLGVTLWELFEfGAQPY 142
Cdd:cd05618    170 EGLRpgdttSTFCGTPN-------YIAPEILrGEDYGFSV--------DWWALGVLMFEMMA-GRSPF 221
STKc_cGK cd05572
Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); ...
45-142 5.84e-04

Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270724 [Multi-domain]  Cd Length: 262  Bit Score: 42.98  E-value: 5.84e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   45 LAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHS--NYKEDYYL--TPErlwvplrWAAPE-LLGELHGSFVlvdqs 119
Cdd:cd05572    106 FEYLHSRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKlgSGRKTWTFcgTPE-------YVAPEiILNKGYDFSV----- 173
                           90       100
                   ....*....|....*....|...
gi 1720423198  120 resNVWSLGVTLWELFEfGAQPY 142
Cdd:cd05572    174 ---DYWSLGILLYELLT-GRPPF 192
STKc_CDKL1_4 cd07847
Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; ...
2-134 6.35e-04

Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL1/4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270837 [Multi-domain]  Cd Length: 286  Bit Score: 43.13  E-value: 6.35e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    2 EFCQ---LGDLKRYlraqrpPEGMsPELpprdlrTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd07847     80 EYCDhtvLNELEKN------PRGV-PEH------LIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGF 146
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AHS-NYKEDYYLTperlWVPLRW-AAPELL-GEL-HGSFVlvdqsresNVWSLGVTLWEL 134
Cdd:cd07847    147 ARIlTGPGDDYTD----YVATRWyRAPELLvGDTqYGPPV--------DVWAIGCVFAEL 194
STKc_SPEG_rpt2 cd14111
Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle ...
39-155 6.63e-04

Catalytic kinase domain, second repeat, of Giant Serine/Threonine Kinase Striated muscle preferentially expressed protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Striated muscle preferentially expressed gene (SPEG) generates 4 different isoforms through alternative promoter use and splicing in a tissue-specific manner: SPEGalpha and SPEGbeta are expressed in cardiac and skeletal striated muscle; Aortic Preferentially Expressed Protein-1 (APEG-1) is expressed in vascular smooth muscle; and Brain preferentially expressed gene (BPEG) is found in the brain and aorta. SPEG proteins have mutliple immunoglobulin (Ig), 2 fibronectin type III (FN3), and two kinase domains. They are necessary for cardiac development and survival. The SPEG subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271013 [Multi-domain]  Cd Length: 257  Bit Score: 42.89  E-value: 6.63e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnYKEDYYLTPERLWVPLRWAAPELL-GELHGSfvlvd 117
Cdd:cd14111    106 VQILQGLEYLHGRRVLHLDIKPDNIMVTNLNAIKIVDFGSAQS-FNPLSLRQLGRRTGTLEYMAPEMVkGEPVGP----- 179
                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1720423198  118 qsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVV 155
Cdd:cd14111    180 ---PADIWSIGVLTYIMLS-GRSPFEDQDPQETEAKIL 213
STKc_IKK cd13989
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase ...
1-146 6.85e-04

Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The IKK complex functions as a master regulator of Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. It is composed of two kinases, IKKalpha and IKKbeta, and the regulatory subunit IKKgamma or NEMO (NF-kB Essential MOdulator). IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. There are two IKK pathways that regulate NF-kB signaling, called the classical (involving IKKbeta and NEMO) and non-canonical (involving IKKalpha) pathways. The classical pathway regulates the majority of genes activated by NF-kB. The IKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270891 [Multi-domain]  Cd Length: 289  Bit Score: 43.21  E-value: 6.85e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPPEGMSpELpprDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLT---SDLTVRIGDYG 77
Cdd:cd13989     78 MEYCSGGDLRKVLNQPENCCGLK-ES---EVRTLLS---DISSAISYLHENRIIHRDLKPENIVLQqggGRVIYKLIDLG 150
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720423198   78 LAhsnyKEdyyLTPERLWVP----LRWAAPELLGELHGSFVlVDqsresnVWSLGVTLWELFEfGAQPYRHLS 146
Cdd:cd13989    151 YA----KE---LDQGSLCTSfvgtLQYLAPELFESKKYTCT-VD------YWSFGTLAFECIT-GYRPFLPNW 208
STKc_JNK cd07850
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the ...
44-134 7.27e-04

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270840 [Multi-domain]  Cd Length: 337  Bit Score: 43.17  E-value: 7.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNyKEDYYLTPerlWVPLR-WAAPE-LLGelhgsfvlVDQSRE 121
Cdd:cd07850    114 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTP---YVVTRyYRAPEvILG--------MGYKEN 181
                           90
                   ....*....|...
gi 1720423198  122 SNVWSLGVTLWEL 134
Cdd:cd07850    182 VDIWSVGCIMGEM 194
STKc_PAK3 cd06656
Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine ...
40-202 7.36e-04

Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3; Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation.


Pssm-ID: 132987 [Multi-domain]  Cd Length: 297  Bit Score: 43.17  E-value: 7.36e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPER------LWVPLrWAAPELLG-ELHGS 112
Cdd:cd06656    123 ECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-------ITPEQskrstmVGTPY-WMAPEVVTrKAYGP 194
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  113 FVlvdqsresNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARP-RLKLPYADYwydiLQSCWRPPAQRPS 191
Cdd:cd06656    195 KV--------DIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPeRLSAVFRDF----LNRCLEMDVDRRG 261
                          170
                   ....*....|.
gi 1720423198  192 ASDLQLQLTYL 202
Cdd:cd06656    262 SAKELLQHPFL 272
STKc_DRAK2 cd14198
The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related ...
26-194 8.24e-04

The catalytic domain of the Serine/Threonine Kinase, Death-associated protein kinase-Related Apoptosis-inducing protein Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. DRAKs were named based on their similarity (around 50% identity) to the kinase domain of DAPKs. They contain an N-terminal kinase domain and a C-terminal regulatory domain. Vertebrates contain two subfamily members, DRAK1 and DRAK2 (also called STK17B). Both DRAKs are localized to the nucleus, autophosphorylate themselves, and phosphorylate myosin light chain as a substrate. DRAK2 has been implicated in inducing or enhancing apoptosis in beta cells, fibroblasts, and lymphoid cells, where it is highly expressed. It is involved in regulating many immune processes including the germinal center (GC) reaction, responses to thymus-dependent antigens, activated T cell survival, memory T cell responses. It may be involved in the development of autoimmunity. The DRAK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271100 [Multi-domain]  Cd Length: 270  Bit Score: 42.60  E-value: 8.24e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   26 LPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTS-----DltVRIGDYGLA----HSNYKEDYYLTPERLwv 96
Cdd:cd14198    107 VSENDIIRLIRQILE---GVYYLHQNNIVHLDLKPQNILLSSiyplgD--IKIVDFGMSrkigHACELREIMGTPEYL-- 179
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   97 plrwaAPELLGelhgsfvLVDQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLaFVVRQQHVKLAR---PRLKLPYAD 173
Cdd:cd14198    180 -----APEILN-------YDPITTATDMWNIGVIAYMLLT-HESPFVGEDNQETF-LNISQVNVDYSEetfSSVSQLATD 245
                          170       180
                   ....*....|....*....|.
gi 1720423198  174 YWYDILQscwRPPAQRPSASD 194
Cdd:cd14198    246 FIQKLLV---KNPEKRPTAEI 263
STKc_JNK3 cd07874
Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the ...
44-134 9.05e-04

Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in JNK3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 143379 [Multi-domain]  Cd Length: 355  Bit Score: 43.15  E-value: 9.05e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNyKEDYYLTPerlWVPLR-WAAPELLgelhgsfVLVDQSRES 122
Cdd:cd07874    131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTP---YVVTRyYRAPEVI-------LGMGYKENV 199
                           90
                   ....*....|..
gi 1720423198  123 NVWSLGVTLWEL 134
Cdd:cd07874    200 DIWSVGCIMGEM 211
STKc_Chk2 cd14084
Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze ...
47-152 9.10e-04

Catalytic domain of the Serine/Threonine kinase, Cell cycle Checkpoint Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Checkpoint Kinase 2 (Chk2) plays an important role in cellular responses to DNA double-strand breaks and related lesions. It is phosphorylated and activated by ATM kinase, resulting in its dissociation from sites of damage to phosphorylate downstream targets such as BRCA1, p53, cell cycle transcription factor E2F1, the promyelocytic leukemia protein (PML) involved in apoptosis, and CDC25 phosphatases, among others. Mutations in Chk2 is linked to a variety of cancers including familial breast cancer, myelodysplastic syndromes, prostate cancer, lung cancer, and osteosarcomas. Chk2 contains an N-terminal SQ/TQ cluster domain (SCD), a central forkhead-associated (FHA) domain, and a C-terminal catalytic kinase domain. The Chk2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270986 [Multi-domain]  Cd Length: 275  Bit Score: 42.77  E-value: 9.10e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   47 HLHSHNYVHSDLALRNCLLTSD---LTVRIGDYGLahSNYKEDYYLTPERLWVPLrWAAPELLGelhgSFVLVDQSRESN 123
Cdd:cd14084    126 YLHSNGIIHRDLKPENVLLSSQeeeCLIKITDFGL--SKILGETSLMKTLCGTPT-YLAPEVLR----SFGTEGYTRAVD 198
                           90       100
                   ....*....|....*....|....*....
gi 1720423198  124 VWSLGVTLWELFEfGAQPYRHLSDEEVLA 152
Cdd:cd14084    199 CWSLGVILFICLS-GYPPFSEEYTQMSLK 226
STKc_Nek9 cd08221
Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA) ...
40-195 9.41e-04

Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270860 [Multi-domain]  Cd Length: 256  Bit Score: 42.42  E-value: 9.41e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----HSNYKEDYYLTPerlwvplRWAAPELLGELHGSFv 114
Cdd:cd08221    109 QIVSAVSHIHKAGILHRDIKTLNIFLTKADLVKLGDFGISkvldsESSMAESIVGTP-------YYMSPELVQGVKYNF- 180
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsrESNVWSLGVTLWELFE----FGA-QPYRhlsdeevLAFVVRQQHVKLARPRLKLPYADYWYDILQscwRPPAQR 189
Cdd:cd08221    181 ------KSDIWAVGCVLYELLTlkrtFDAtNPLR-------LAVKIVQGEYEDIDEQYSEEIIQLVHDCLH---QDPEDR 244

                   ....*.
gi 1720423198  190 PSASDL 195
Cdd:cd08221    245 PTAEEL 250
STKc_PAK1 cd06654
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the ...
40-202 9.54e-04

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. PAK1 belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270820 [Multi-domain]  Cd Length: 296  Bit Score: 42.79  E-value: 9.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPER------LWVPLrWAAPELLG-ELHGS 112
Cdd:cd06654    124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-------ITPEQskrstmVGTPY-WMAPEVVTrKAYGP 195
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  113 FVlvdqsresNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRlKLpyADYWYDILQSCWRPPAQRPSA 192
Cdd:cd06654    196 KV--------DIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNPE-KL--SAIFRDFLNRCLEMDVEKRGS 263
                          170
                   ....*....|
gi 1720423198  193 SDLQLQLTYL 202
Cdd:cd06654    264 AKELLQHQFL 273
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
1-150 9.67e-04

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 42.46  E-value: 9.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQrppeGMSPELPPRDLRTlqrmglEIARGLAHLHSHNYVHSDLALRNCLLTSD--LTVRIGDYGL 78
Cdd:cd14098     80 MEYVEGGDLMDFIMAW----GAIPEQHARELTK------QILEAMAYTHSMGITHRDLKPENILITQDdpVIVKISDFGL 149
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198   79 A---HSN-YKEDYYLTPERLwvplrwaAPELLGELHGSfvlvDQSRESNV---WSLGVTLWELFEfGAQPYRHLSDEEV 150
Cdd:cd14098    150 AkviHTGtFLVTFCGTMAYL-------APEILMSKEQN----LQGGYSNLvdmWSVGCLVYVMLT-GALPFDGSSQLPV 216
STKc_IRE1 cd13982
Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze ...
1-79 1.02e-03

Catalytic domain of the Serine/Threonine kinase, Inositol-requiring protein 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is an ER-localized type I transmembrane protein with kinase and endoribonuclease domains in the cytoplasmic side. It acts as an ER stress sensor and is the oldest and most conserved component of the unfolded protein response (UPR) in eukaryotes. The UPR is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. During ER stress, IRE1 dimerizes and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and XBP1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). The Ire1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270884 [Multi-domain]  Cd Length: 269  Bit Score: 42.26  E-value: 1.02e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQ--LGDLkrylrAQRPPEGMSPELPPRDLRTLQRmglEIARGLAHLHSHNYVHSDLALRNCLLTSD-----LTVRI 73
Cdd:cd13982     74 LELCAasLQDL-----VESPRESKLFLRPGLEPVRLLR---QIASGLAHLHSLNIVHRDLKPQNILISTPnahgnVRAMI 145

                   ....*.
gi 1720423198   74 GDYGLA 79
Cdd:cd13982    146 SDFGLC 151
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
40-149 1.03e-03

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 42.25  E-value: 1.03e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL---AHSNYKEDYYLTperlwvpLRWAAPELL-GELHGSFVl 115
Cdd:cd14116    113 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWsvhAPSSRRTTLCGT-------LDYLPPEMIeGRMHDEKV- 184
                           90       100       110
                   ....*....|....*....|....*....|....
gi 1720423198  116 vdqsresNVWSLGVTLWElFEFGAQPYRHLSDEE 149
Cdd:cd14116    185 -------DLWSLGVLCYE-FLVGKPPFEANTYQE 210
arch_bud32 TIGR03724
Kae1-associated kinase Bud32; Members of this protein family are the Bud32 protein associated ...
40-87 1.07e-03

Kae1-associated kinase Bud32; Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. [Unknown function, General]


Pssm-ID: 274749 [Multi-domain]  Cd Length: 199  Bit Score: 41.81  E-value: 1.07e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIgDYGLA-HSNYKEDY 87
Cdd:TIGR03724   98 EIGRLVGKLHKAGIVHGDLTTSNIIVRDDKVYLI-DFGLGkYSDEIEDK 145
STKc_MAST cd05609
Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine ...
1-155 1.09e-03

Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also called syntrophin-associated STK (SAST) while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270760 [Multi-domain]  Cd Length: 280  Bit Score: 42.39  E-value: 1.09e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRP-PEGMSpelpprdlrtlqRMGL-EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd05609     79 MEYVEGGDCATLLKNIGPlPVDMA------------RMYFaETVLALEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGL 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   79 AH-------SNYKEDY-------------YLTPErlwvplrWAAPEllgelhgsfVLVDQ--SRESNVWSLGVTLWElFE 136
Cdd:cd05609    147 SKiglmsltTNLYEGHiekdtrefldkqvCGTPE-------YIAPE---------VILRQgyGKPVDWWAMGIILYE-FL 209
                          170
                   ....*....|....*....
gi 1720423198  137 FGAQPYRHLSDEEVLAFVV 155
Cdd:cd05609    210 VGCVPFFGDTPEELFGQVI 228
PK_GC_unk cd14045
Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The ...
40-78 1.17e-03

Pseudokinase domain of the unknown subfamily of membrane Guanylate Cyclase receptors; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. Membrane (or particulate) GCs consist of an extracellular ligand-binding domain, a single transmembrane region, and an intracellular tail that contains a PK-like domain, an amphiphatic region and a catalytic GC domain that catalyzes the conversion of GTP into cGMP and pyrophosphate. Membrane GCs act as receptors that transduce an extracellular signal to the intracellular production of cGMP, which has been implicated in many processes including cell proliferation, phototransduction, and muscle contractility, through its downstream effectors such as PKG. The PK-like domain of GCs lack a critical aspartate involved in ATP binding and does not exhibit kinase activity. It functions as a negative regulator of the catalytic GC domain and may also act as a docking site for interacting proteins such as GC-activating proteins. The GC subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270947 [Multi-domain]  Cd Length: 269  Bit Score: 42.15  E-value: 1.17e-03
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGL 78
Cdd:cd14045    111 DIARGMAYLHQHKIYHGRLKSSNCVIDDRWVCKIADYGL 149
STKc_PFTAIRE2 cd07870
Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer ...
8-141 1.18e-03

Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. It shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270852 [Multi-domain]  Cd Length: 286  Bit Score: 42.26  E-value: 1.18e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLrAQRPPEgmspeLPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDY 87
Cdd:cd07870     83 DLAQYM-IQHPGG-----LHPYNVRLFM---FQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 153
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   88 YLTPERlwVPLRWAAPE-LLGElhgsfvlVDQSRESNVWSLGVTLWELFEfgAQP 141
Cdd:cd07870    154 TYSSEV--VTLWYRPPDvLLGA-------TDYSSALDIWGAGCIFIEMLQ--GQP 197
STKc_nPKC_epsilon cd05591
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze ...
40-141 1.44e-03

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-epsilon subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270743 [Multi-domain]  Cd Length: 321  Bit Score: 42.09  E-value: 1.44e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPErlwvplrWAAPELLGEL-HGSF 113
Cdd:cd05591    104 EVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGkttttFCGTPD-------YIAPEILQELeYGPS 176
                           90       100
                   ....*....|....*....|....*...
gi 1720423198  114 VlvdqsresNVWSLGVTLWELfeFGAQP 141
Cdd:cd05591    177 V--------DWWALGVLMYEM--MAGQP 194
STKc_RSK_N cd05582
N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; ...
40-172 1.46e-03

N-terminal catalytic domain of the Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270734 [Multi-domain]  Cd Length: 317  Bit Score: 42.39  E-value: 1.46e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----HSNYKEDYYLTPErlwvplrWAAPELLGElHGsfv 114
Cdd:cd05582    105 ELALALDHLHSLGIIYRDLKPENILLDEDGHIKLTDFGLSkesidHEKKAYSFCGTVE-------YMAPEVVNR-RG--- 173
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720423198  115 lvdQSRESNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRqqhVKLARPRLKLPYA 172
Cdd:cd05582    174 ---HTQSADWWSFGVLMFEMLT-GSLPFQGKDRKETMTMILK---AKLGMPQFLSPEA 224
PK_KSR2 cd14153
Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to ...
30-202 1.50e-03

Pseudokinase domain of Kinase Suppressor of Ras 2; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. KSR2 interacts with the protein phosphatase calcineurin and functions in calcium-mediated ERK signaling. It also functions in energy metabolism by regulating AMP kinase and AMPK-dependent processes such as glucose uptake and fatty acid oxidation. KSR proteins act as scaffold proteins that function downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway that regulates many cellular processes including cycle regulation, proliferation, differentiation, survival, and apoptosis. KSR proteins regulate the assembly and activation of the Raf/MEK/ERK module upon Ras activation at the membrane by direct association of its components. They are widely regarded as pseudokinases. The KSR2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271055 [Multi-domain]  Cd Length: 270  Bit Score: 41.92  E-value: 1.50e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   30 DLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVrIGDYGL------AHSNYKEDyyltpeRLWVPLRW--- 100
Cdd:cd14153     95 DVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGLftisgvLQAGRRED------KLRIQSGWlch 167
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  101 AAPELLGELHGSfVLVDQ---SRESNVWSLGVTLWEL----FEFGAQPyrhlsdeevlAFVVRQQHVKLARPRL-KLPYA 172
Cdd:cd14153    168 LAPEIIRQLSPE-TEEDKlpfSKHSDVFAFGTIWYELhareWPFKTQP----------AEAIIWQVGSGMKPNLsQIGMG 236
                          170       180       190
                   ....*....|....*....|....*....|.
gi 1720423198  173 DYWYDILQSCWR-PPAQRPSASDLQLQLTYL 202
Cdd:cd14153    237 KEISDILLFCWAyEQEERPTFSKLMEMLEKL 267
STKc_SGK2 cd05603
Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; ...
40-142 1.67e-03

Catalytic domain of the Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SGK2 shows a more restricted distribution than SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. The SGK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270754 [Multi-domain]  Cd Length: 321  Bit Score: 41.88  E-value: 1.67e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKED-----YYLTPERLwvplrwaAPELLGElhgsfv 114
Cdd:cd05603    104 EVASAIGYLHSLNIIYRDLKPENILLDCQGHVVLTDFGLCKEGMEPEettstFCGTPEYL-------APEVLRK------ 170
                           90       100
                   ....*....|....*....|....*...
gi 1720423198  115 lVDQSRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd05603    171 -EPYDRTVDWWCLGAVLYEML-YGLPPF 196
PTZ00263 PTZ00263
protein kinase A catalytic subunit; Provisional
40-134 1.75e-03

protein kinase A catalytic subunit; Provisional


Pssm-ID: 140289 [Multi-domain]  Cd Length: 329  Bit Score: 42.11  E-value: 1.75e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYL--TPERLwvplrwaAPELL-GELHGSFVlv 116
Cdd:PTZ00263   126 ELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLcgTPEYL-------APEVIqSKGHGKAV-- 196
                           90
                   ....*....|....*...
gi 1720423198  117 dqsresNVWSLGVTLWEL 134
Cdd:PTZ00263   197 ------DWWTMGVLLYEF 208
PK_STRAD cd08216
Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows ...
40-195 1.79e-03

Pseudokinase domain of STE20-related kinase adapter protein; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the serine/threonine kinase (STK), LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270856 [Multi-domain]  Cd Length: 315  Bit Score: 41.90  E-value: 1.79e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLT-----PERLWVPLRWAAPELLGE-LHGsf 113
Cdd:cd08216    109 DVLNALEYIHSKGYIHRSVKASHILISGDGKVVLSGLRYAYSMVKHGKRQRvvhdfPKSSEKNLPWLSPEVLQQnLLG-- 186
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  114 vlvdQSRESNVWSLGVTLWELFEfGAQPYR-----------------HLSDE----EVLAFVVRQQHVKLARP----RLK 168
Cdd:cd08216    187 ----YNEKSDIYSVGITACELAN-GVVPFSdmpatqmllekvrgttpQLLDCstypLEEDSMSQSEDSSTEHPnnrdTRD 261
                          170       180       190
                   ....*....|....*....|....*....|..
gi 1720423198  169 LPY----ADYWYDILQSCWRP-PAQRPSASDL 195
Cdd:cd08216    262 IPYqrtfSEAFHQFVELCLQRdPELRPSASQL 293
STKc_Sty1_Hog1 cd07856
Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases ...
8-136 1.91e-03

Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. It is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response. Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. MAPKs are important mediators of cellular responses to extracellular signals. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270843 [Multi-domain]  Cd Length: 328  Bit Score: 41.79  E-value: 1.91e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQrppegmspelpPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykEDY 87
Cdd:cd07856     95 DLHRLLTSR-----------PLEKQFIQYFLYQILRGLKYVHSAGVIHRDLKPSNILVNENCDLKICDFGLARI---QDP 160
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720423198   88 YLTPerlWVPLR-WAAPELLGELHGSFVLVDqsresnVWSLGVTLWELFE 136
Cdd:cd07856    161 QMTG---YVSTRyYRAPEIMLTWQKYDVEVD------IWSAGCIFAEMLE 201
PHA03207 PHA03207
serine/threonine kinase US3; Provisional
20-134 1.93e-03

serine/threonine kinase US3; Provisional


Pssm-ID: 165473 [Multi-domain]  Cd Length: 392  Bit Score: 42.14  E-value: 1.93e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   20 EGMSPeLPPRDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA-----HSNYKEDYYltperl 94
Cdd:PHA03207   177 DRSGP-LPLEQAITIQRRLLE---ALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAAckldaHPDTPQCYG------ 246
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1720423198   95 WV-PLRWAAPELLGelhgsfvLVDQSRESNVWSLGVTLWEL 134
Cdd:PHA03207   247 WSgTLETNSPELLA-------LDPYCAKTDIWSAGLVLFEM 280
STKc_SNT7_plant cd14013
Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the ...
14-106 2.02e-03

Catalytic domain of the Serine/Threonine kinase, Plant SNT7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SNT7 is a plant thylakoid-associated kinase that is essential in short- and long-term acclimation responses to cope with various light conditions in order to maintain photosynthetic redox poise for optimal photosynthetic performance. Short-term response involves state transitions over periods of minutes while the long-term response (LTR) occurs over hours to days and involves changing the relative amounts of photosystems I and II. SNT7 acts as a redox sensor and a signal transducer for both responses, which are triggered by the redox state of the plastoquinone (PQ) pool. It is positioned at the top of a phosphorylation cascade that induces state transitions by phosphorylating light-harvesting complex II (LHCII), and triggers the LTR through the phosphorylation of chloroplast proteins. The SNT7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270915 [Multi-domain]  Cd Length: 318  Bit Score: 41.65  E-value: 2.02e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   14 RAQRPPEGmspelPPRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLT-SDLTVRIGDYGLAHS-----NY-KED 86
Cdd:cd14013    107 RVLIPPRG-----PKRENVIIKSIMRQILVALRKLHSTGIVHRDVKPQNIIVSeGDGQFKIIDLGAAADlrigiNYiPKE 181
                           90       100
                   ....*....|....*....|
gi 1720423198   87 YYLTPerlwvplRWAAPELL 106
Cdd:cd14013    182 FLLDP-------RYAPPEQY 194
STKc_nPKC_eta cd05590
Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the ...
1-160 2.40e-03

Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C eta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. The nPKC-eta subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270742 [Multi-domain]  Cd Length: 323  Bit Score: 41.43  E-value: 2.40e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRPpegmspelppRDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05590     75 MEFVNGGDLMFHIQKSRR----------FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 144
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYKE-----DYYLTPErlwvplrWAAPELLGE-LHGsfVLVDQsresnvWSLGVTLWELFEfGAQPYRHLSDEEVLAFV 154
Cdd:cd05590    145 EGIFNgkttsTFCGTPD-------YIAPEILQEmLYG--PSVDW------WAMGVLLYEMLC-GHAPFEAENEDDLFEAI 208

                   ....*.
gi 1720423198  155 VRQQHV 160
Cdd:cd05590    209 LNDEVV 214
STKc_MLCK4 cd14193
Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze ...
40-151 2.71e-03

Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. In vertebrates, different MLCKs function in smooth (MLCK1), skeletal (MLCK2), and cardiac (MLCK3) muscles. A fourth protein, MLCK4, has also been identified through comprehensive genome analysis although it has not been biochemically characterized. MLCK4 (or MYLK4 or SgK085) contains a single kinase domain near the C-terminus. The MLCK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271095 [Multi-domain]  Cd Length: 261  Bit Score: 41.05  E-value: 2.71e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLT--VRIGDYGLAHsNYKEDYYL-----TPERLwvplrwaAPELLGELHGS 112
Cdd:cd14193    110 QICEGIQYMHQMYILHLDLKPENILCVSREAnqVKIIDFGLAR-RYKPREKLrvnfgTPEFL-------APEVVNYEFVS 181
                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1720423198  113 FvlvdqsrESNVWSLGVTLWELFEfGAQPYRHLSDEEVL 151
Cdd:cd14193    182 F-------PTDMWSLGVIAYMLLS-GLSPFLGEDDNETL 212
STKc_PINK1 cd14018
Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze ...
29-192 2.86e-03

Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PINK1 contains an N-terminal mitochondrial targeting sequence, a catalytic domain, and a C-terminal regulatory region. It plays an important role in maintaining mitochondrial homeostasis. It protects cells against oxidative stress-induced apoptosis by phosphorylating the chaperone TNFR-associated protein 1 (TRAP1), also called Hsp75. Phosphorylated TRAP1 prevents cytochrome c release and peroxide-induced apoptosis. PINK1 interacts with Omi/HtrA2, a serine protease, and Parkin, an E3 ubiquitin ligase, in different pathways to promote mitochondrial health. The parkin gene is the most commonly mutated gene in autosomal recessive familial parkinsonism. Mutations within the catalytic domain of PINK1 are also associated with Parkinson's disease. The PINK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270920 [Multi-domain]  Cd Length: 313  Bit Score: 41.33  E-value: 2.86e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   29 RDLRTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLT----VRIGDYGLAHSNYKEDYYLTPERLWVPL----RW 100
Cdd:cd14018    135 PSYRLARVMILQLLEGVDHLVRHGIAHRDLKSDNILLELDFDgcpwLVIADFGCCLADDSIGLQLPFSSWYVDRggnaCL 214
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  101 AAPELLGELHGSFVLVDQSReSNVWSLGVTLWELFEFgAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLPYADYWYDILQ 180
Cdd:cd14018    215 MAPEVSTAVPGPGVVINYSK-ADAWAVGAIAYEIFGL-SNPFYGLGDTMLESRSYQESQLPALPSAVPPDVRQVVKDLLQ 292
                          170
                   ....*....|..
gi 1720423198  181 scwRPPAQRPSA 192
Cdd:cd14018    293 ---RDPNKRVSA 301
STKc_KIS cd14020
Catalytic domain of the Serine/Threonine Kinase, Kinase Interacting with Stathmin (also called ...
34-135 3.19e-03

Catalytic domain of the Serine/Threonine Kinase, Kinase Interacting with Stathmin (also called U2AF homology motif (UHM) kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. KIS (or UHMK1) contains an N-terminal kinase domain and a C-terminal domain with a UHM motif, a protein interaction motif initially found in the pre-mRNA splicing factor U2AF. It phosphorylates the splicing factor SF1, which enhances binding to the splice site to promote spliceosome assembly. KIS was first identified as a kinase that interacts with stathmin, a phosphoprotein that plays a role in axon development and microtubule dynamics. It localizes in RNA granules in neurons and is important in neurite outgrowth. The KIS/UHMK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270922 [Multi-domain]  Cd Length: 285  Bit Score: 41.07  E-value: 3.19e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   34 LQRMGLEIARGLAHLHSHNYVHSDLALRNCLLTSD-LTVRIGDYGLAHSNYKEDY-YLTPERlwvplrWAAPEllGELHG 111
Cdd:cd14020    112 IQHCARDVLEALAFLHHEGYVHADLKPRNILWSAEdECFKLIDFGLSFKEGNQDVkYIQTDG------YRAPE--AELQN 183
                           90       100       110
                   ....*....|....*....|....*....|
gi 1720423198  112 SFVLVDQSRES------NVWSLGVTLWELF 135
Cdd:cd14020    184 CLAQAGLQSETectsavDLWSLGIVLLEMF 213
STKc_Nek10 cd08528
Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase ...
37-200 3.35e-03

Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Nek10 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270867 [Multi-domain]  Cd Length: 270  Bit Score: 40.95  E-value: 3.35e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   37 MGLEIARGLAHLHSHN-YVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTpeRLWVPLRWAAPELL-GELHGsfv 114
Cdd:cd08528    118 IFVQMVLALRYLHKEKqIVHRDLKPNNIMLGEDDKVTITDFGLAKQKGPESSKMT--SVVGTILYSCPEIVqNEPYG--- 192
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  115 lvdqsRESNVWSLGVTLWELFEFgaQPYRHLSDEEVLAF-VVRQQHVKLARPRlklpYADYWYDILQSCWRP-PAQRPSA 192
Cdd:cd08528    193 -----EKADIWALGCILYQMCTL--QPPFYSTNMLTLATkIVEAEYEPLPEGM----YSDDITFVIRSCLTPdPEARPDI 261

                   ....*...
gi 1720423198  193 SDLQLQLT 200
Cdd:cd08528    262 VEVSSMIS 269
STKc_GSK3 cd14137
The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze ...
9-79 3.47e-03

The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GSK3 is a mutifunctional kinase involved in many cellular processes including cell division, proliferation, differentiation, adhesion, and apoptosis. In plants, GSK3 plays a role in the response to osmotic stress. In Caenorhabditis elegans, it plays a role in regulating normal oocyte-to-embryo transition and response to oxidative stress. In Chlamydomonas reinhardtii, GSK3 regulates flagellar length and assembly. In mammals, there are two isoforms, GSK3alpha and GSK3beta, which show both distinct and redundant functions. The two isoforms differ mainly in their N-termini. They are both involved in axon formation and in Wnt signaling.They play distinct roles in cardiogenesis, with GSKalpha being essential in cardiomyocyte survival, and GSKbeta regulating heart positioning and left-right symmetry. GSK3beta was first identified as a regulator of glycogen synthesis, but has since been determined to play other roles. It regulates the degradation of beta-catenin and IkB. Beta-catenin is the main effector of Wnt, which is involved in normal haematopoiesis and stem cell function. IkB is a central inhibitor of NF-kB, which is critical in maintaining leukemic cell growth. GSK3beta is enriched in the brain and is involved in regulating neuronal signaling pathways. It is implicated in the pathogenesis of many diseases including Type II diabetes, obesity, mood disorders, Alzheimer's disease, osteoporosis, and some types of cancer, among others. The GSK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271039 [Multi-domain]  Cd Length: 293  Bit Score: 40.95  E-value: 3.47e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720423198    9 LKRYLRAQRPpegmspeLPPRDLR--TLQrmgleIARGLAHLHSHNYVHSDLALRNCLL-TSDLTVRIGDYGLA 79
Cdd:cd14137     93 IRHYSKNKQT-------IPIIYVKlySYQ-----LFRGLAYLHSLGICHRDIKPQNLLVdPETGVLKLCDFGSA 154
STKc_VRK1 cd14122
Catalytic domain of the Serine/Threonine protein kinase, Vaccinia Related Kinase 1; STKs ...
32-86 3.82e-03

Catalytic domain of the Serine/Threonine protein kinase, Vaccinia Related Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. VRKs were initially discovered due to its similarity to vaccinia virus B1R STK, which is important for viral replication. Vertebrates contain three VRK proteins. Human VRK1 is implicated in the regulation of many cellular processes including cell cycle progression and proliferation, stress responses, nuclear envelope assembly and chromatin condensation. It regulates cell cycle progression during the DNA replication period by inducing cyclin D1 expression. VRK1 also phosphorylates and regulates some transcription factors including p53, c-Jun, ATF2, and nuclear factor BAF. VRK1 stabilizes p53 by interfering with its mdm2-mediated degradation. Accumulation of p53, which blocks cell growth and division, is modulated by an autoregulatory loop between p53 and VRK1 (accumulated p53 downregulates VRK1). This autoregulatory loop has been found to be nonfunctional in some lung carcinomas. The VRK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271024 [Multi-domain]  Cd Length: 301  Bit Score: 40.64  E-value: 3.82e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   32 RTLQRMGLEIARGLAHLHSHNYVHSDLALRNCLL--TSDLTVRIGDYGLA--------HSNYKED 86
Cdd:cd14122    127 KTVLQLGLRILDILEYIHEHEYVHGDIKASNLLLsyKNPDQVYLVDYGLAyrycpegvHKEYKED 191
STKc_PIM1 cd14100
Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) ...
28-196 4.82e-03

Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PIM gene locus was discovered as a result of the cloning of retroviral intergration sites in murine Moloney leukemia virus, leading to the identification of PIM kinases. They are constitutively active STKs with a broad range of cellular targets and are overexpressed in many haematopoietic malignancies and solid cancers. Vertebrates contain three distinct PIM kinase genes (PIM1-3); each gene may result in mutliple protein isoforms. There are two PIM1 isoforms resulting from alternative translation initiation sites. PIM1 is the founding member of the PIM subfamily. It is involved in regulating cell growth, differentiation, and apoptosis. It promotes cancer development when overexpressed by inhibiting apoptosis, promoting cell proliferation, and promoting genomic instability. The PIM1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271002 [Multi-domain]  Cd Length: 254  Bit Score: 40.34  E-value: 4.82e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   28 PRDL-RTLQRMGLEIARglaHLHSHNYVHSDLALRNCLL---TSDLT-VRIGDYGLAHSNYKEDYYLTpeRLWVPLRWAA 102
Cdd:cd14100    104 PEELaRSFFRQVLEAVR---HCHNCGVLHRDIKDENILIdlnTGELKlIDFGSGALLKDTVYTDFDGT--RVYSPPEWIR 178
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  103 pelLGELHGsfvlvdqsRESNVWSLGVTLWELFeFGAQPYRHlsDEEvlafVVRQQHVKLARPRLKLPYADYWYDILQsc 182
Cdd:cd14100    179 ---FHRYHG--------RSAAVWSLGILLYDMV-CGDIPFEH--DEE----IIRGQVFFRQRVSSECQHLIKWCLALR-- 238
                          170
                   ....*....|....
gi 1720423198  183 wrpPAQRPSASDLQ 196
Cdd:cd14100    239 ---PSDRPSFEDIQ 249
STKc_MEKK3 cd06651
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular ...
40-195 4.92e-03

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MEKK3 is a MAPK kinase kinase (MAPKKK or MKKK), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates ERK5. The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270817 [Multi-domain]  Cd Length: 271  Bit Score: 40.45  E-value: 4.92e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTPER--LWVPLrWAAPELL-GELHGsfvlv 116
Cdd:cd06651    119 QILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRsvTGTPY-WMSPEVIsGEGYG----- 192
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1720423198  117 dqsRESNVWSLGVTLWELFEfGAQPYrhlSDEEVLAFVVRQQhVKLARPRLKLPYADYWYDILQSCWRPPAQRPSASDL 195
Cdd:cd06651    193 ---RKADVWSLGCTVVEMLT-EKPPW---AEYEAMAAIFKIA-TQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEEL 263
STKc_cPKC_alpha cd05615
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs ...
40-164 5.27e-03

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C alpha; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. The cPKC-alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270766 [Multi-domain]  Cd Length: 341  Bit Score: 40.37  E-value: 5.27e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKE-----DYYLTPErlwvplrWAAPELLG-ELHGsf 113
Cdd:cd05615    119 EISVGLFFLHKKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVEgvttrTFCGTPD-------YIAPEIIAyQPYG-- 189
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1720423198  114 vlvdqsRESNVWSLGVTLWELfeFGAQPYRHLSDEEVLAFVVRQQHVKLAR 164
Cdd:cd05615    190 ------RSVDWWAYGVLLYEM--LAGQPPFDGEDEDELFQSIMEHNVSYPK 232
STKc_Vps15 cd13980
Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein ...
43-195 5.67e-03

Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Vps15 is a large protein consisting of an N-terminal kinase domain, a C-terminal WD-repeat containing domain, and an intermediate bridge domain that contain HEAT repeats. The kinase domain is necessary for the signaling functions of Vps15. Human Vps15 was previously called p150. It associates and regulates Vps34, also called Class III phosphoinositide 3-kinase (PI3K), which catalyzes the phosphorylation of D-myo-phosphatidylinositol (PtdIns). Vps34 is the only PI3K present in yeast. It plays an important role in the regulation of protein and vesicular trafficking and sorting, autophagy, trimeric G-protein signaling, and phagocytosis. The Vps15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and PI3K.


Pssm-ID: 270882 [Multi-domain]  Cd Length: 278  Bit Score: 40.31  E-value: 5.67e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   43 RGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYglahSNYKEDY---------------------YLTPERLWVPLRWA 101
Cdd:cd13980    108 HALNQCHKRGVCHGDIKTENVLVTSWNWVYLTDF----ASFKPTYlpednpadfsyffdtsrrrtcYIAPERFVDALTLD 183
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  102 APE--LLGELHgsfvlvdqsRESNVWSLGVTLWELFEFGAQPYrHLSdeEVLAFvvRQQHVKLARPRLKLPYADYWYDIL 179
Cdd:cd13980    184 AESerRDGELT---------PAMDIFSLGCVIAELFTEGRPLF-DLS--QLLAY--RKGEFSPEQVLEKIEDPNIRELIL 249
                          170
                   ....*....|....*.
gi 1720423198  180 QSCWRPPAQRPSASDL 195
Cdd:cd13980    250 HMIQRDPSKRLSAEDY 265
STKc_aPKC cd05588
Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the ...
1-134 5.74e-03

Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270740 [Multi-domain]  Cd Length: 328  Bit Score: 40.48  E-value: 5.74e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQLGDLKRYLRAQRppegmspELPPRDLRTlqrMGLEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd05588     75 IEFVNGGDLMFHMQRQR-------RLPEEHARF---YSAEISLALNFLHEKGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 144
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   81 SNYK-----EDYYLTPErlwvplrWAAPELL-GELHGSFVlvdqsresNVWSLGVTLWEL 134
Cdd:cd05588    145 EGLRpgdttSTFCGTPN-------YIAPEILrGEDYGFSV--------DWWALGVLMFEM 189
STKc_PAK2 cd06655
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the ...
40-202 5.80e-03

Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 2; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. It belongs to the group I PAKs, which contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132986 [Multi-domain]  Cd Length: 296  Bit Score: 40.09  E-value: 5.80e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSnykedyyLTPER------LWVPLrWAAPELLG-ELHGS 112
Cdd:cd06655    123 ECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ-------ITPEQskrstmVGTPY-WMAPEVVTrKAYGP 194
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198  113 FVlvdqsresNVWSLGVTLWELFEfGAQPYRHLSDEEVLAFVVRQQHVKLARPRLKLPyadYWYDILQSCWRPPAQRPSA 192
Cdd:cd06655    195 KV--------DIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSP---IFRDFLNRCLEMDVEKRGS 262
                          170
                   ....*....|
gi 1720423198  193 SDLQLQLTYL 202
Cdd:cd06655    263 AKELLQHPFL 272
STKc_CDK9 cd07865
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs ...
1-106 5.86e-03

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK9, together with a cyclin partner (cyclin T1, T2a, T2b, or K), is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270848 [Multi-domain]  Cd Length: 310  Bit Score: 40.43  E-value: 5.86e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    1 MEFCQlGDLKRYLraQRPPEGMSPElpprDLRTLQRMGLEiarGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAH 80
Cdd:cd07865     98 FEFCE-HDLAGLL--SNKNVKFTLS----EIKKVMKMLLN---GLYYIHRNKILHRDMKAANILITKDGVLKLADFGLAR 167
                           90       100       110
                   ....*....|....*....|....*....|.
gi 1720423198   81 S-----NYKEDYYLTpeRLwVPLRWAAPELL 106
Cdd:cd07865    168 AfslakNSQPNRYTN--RV-VTLWYRPPELL 195
PRK09605 PRK09605
bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase;
40-87 6.60e-03

bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase;


Pssm-ID: 236586 [Multi-domain]  Cd Length: 535  Bit Score: 40.64  E-value: 6.60e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIgDYGLA-HSNYKEDY 87
Cdd:PRK09605   436 KVGEIVAKLHKAGIVHGDLTTSNFIVRDDRLYLI-DFGLGkYSDLIEDK 483
STKc_CDK8_like cd07842
Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs ...
8-134 6.84e-03

Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270834 [Multi-domain]  Cd Length: 316  Bit Score: 39.96  E-value: 6.84e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198    8 DLKRYLRAQRPPEGMSpeLPPRDLRTLQrmgLEIARGLAHLHSHNYVHSDLALRNCLLTSDL----TVRIGDYGLA---H 80
Cdd:cd07842     89 DLWQIIKFHRQAKRVS--IPPSMVKSLL---WQILNGIHYLHSNWVLHRDLKPANILVMGEGpergVVKIGDLGLArlfN 163
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1720423198   81 SNYKEDYYLTPerLWVPLRWAAPEL-LGELHgsfvlvdQSRESNVWSLGVTLWEL 134
Cdd:cd07842    164 APLKPLADLDP--VVVTIWYRAPELlLGARH-------YTKAIDIWAIGCIFAEL 209
pk1 PHA03390
serine/threonine-protein kinase 1; Provisional
44-166 6.87e-03

serine/threonine-protein kinase 1; Provisional


Pssm-ID: 223069 [Multi-domain]  Cd Length: 267  Bit Score: 39.84  E-value: 6.87e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   44 GLAHLHSHNYVHSDLALRNCLLTSDLT-VRIGDYGLAHSNYKE-------DYYlTPERlwvplrwaapeLLGELHG-SFv 114
Cdd:PHA03390   121 ALNDLHKHNIIHNDIKLENVLYDRAKDrIYLCDYGLCKIIGTPscydgtlDYF-SPEK-----------IKGHNYDvSF- 187
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1720423198  115 lvdqsresNVWSLGVTLWELFEfGAQPYRHLSDEEV-LAFVVRQQHVKLARPR 166
Cdd:PHA03390   188 --------DWWAVGVLTYELLT-GKHPFKEDEDEELdLESLLKRQQKKLPFIK 231
STKc_DMPK_like cd05597
Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; ...
40-142 7.00e-03

Catalytic domain of Myotonic Dystrophy protein kinase (DMPK)-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. Three isoforms of MRCK are known, named alpha, beta and gamma. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270748 [Multi-domain]  Cd Length: 331  Bit Score: 40.02  E-value: 7.00e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGlahSNYK--EDYYL-------TPERLwvplrwaAPELL---G 107
Cdd:cd05597    110 EMVLAIDSIHQLGYVHRDIKPDNVLLDRNGHIRLADFG---SCLKlrEDGTVqssvavgTPDYI-------SPEILqamE 179
                           90       100       110
                   ....*....|....*....|....*....|....*
gi 1720423198  108 ELHGSFvlvdqSRESNVWSLGVTLWELFeFGAQPY 142
Cdd:cd05597    180 DGKGRY-----GPECDWWSLGVCMYEML-YGETPF 208
STKc_MAPKAPK5 cd14171
Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated ...
39-132 7.29e-03

Catalytic domain of the Serine/Threonine kinase, Mitogen-activated protein kinase-activated protein kinase 5; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPK-activated protein kinase 5 (MAPKAP5 or MK5) is also called PRAK (p38-regulated/activated protein kinase). It contains a catalytic kinase domain followed by a C-terminal autoinhibitory region that contains nuclear localization (NLS) and nuclear export (NES) signals with a p38 MAPK docking motif that overlaps the NLS. MK5 is a ubiquitous protein that is implicated in neuronal morphogenesis, cell migration, and tumor angiogenesis. It interacts with PKA, which induces cytoplasmic translocation of MK5. Its substrates includes p53, ERK3/4, Hsp27, and cytosolic phospholipase A2 (cPLA2). The MAPKAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271073 [Multi-domain]  Cd Length: 289  Bit Score: 39.75  E-value: 7.29e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLL---TSDLTVRIGDYGLAhsnyKED-----------YYLTPERLWVPlRWAAPE 104
Cdd:cd14171    116 KQIALAVQHCHSLNIAHRDLKPENLLLkdnSEDAPIKLCDFGFA----KVDqgdlmtpqftpYYVAPQVLEAQ-RRHRKE 190
                           90       100
                   ....*....|....*....|....*....
gi 1720423198  105 LLGEL-HGSFVLVDQSreSNVWSLGVTLW 132
Cdd:cd14171    191 RSGIPtSPTPYTYDKS--CDMWSLGVIIY 217
STKc_BUR1 cd07866
Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), ...
39-136 8.90e-03

Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase (CDK), Bypass UAS Requirement 1, and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. BUR1, also called SGV1, is a yeast CDK that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270849 [Multi-domain]  Cd Length: 311  Bit Score: 39.61  E-value: 8.90e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   39 LEIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLAHSNYKEDYYLTP-----ERLWVPL---RW-AAPELLGEL 109
Cdd:cd07866    122 LQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGgggggTRKYTNLvvtRWyRPPELLLGE 201
                           90       100
                   ....*....|....*....|....*..
gi 1720423198  110 HGSFVLVDqsresnVWSLGVTLWELFE 136
Cdd:cd07866    202 RRYTTAVD------IWGIGCVFAEMFT 222
PK_ILK cd14057
Pseudokinase domain of Integrin Linked Kinase; The pseudokinase domain shows similarity to ...
36-134 9.30e-03

Pseudokinase domain of Integrin Linked Kinase; The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. ILK contains N-terminal ankyrin repeats, a Pleckstrin Homology (PH) domain, and a C-terminal pseudokinase domain. It is a component of the IPP (ILK/PINCH/Parvin) complex that couples beta integrins to the actin cytoskeleton, and plays important roles in cell adhesion, spreading, invasion, and migration. ILK was initially thought to be an active kinase despite the lack of key conserved residues because of in vitro studies showing that it can phosphorylate certain protein substrates. However, in vivo experiments in Caenorhabditis elegans, Drosophila melanogaster, and mice (ILK-null and knock-in) proved that ILK is not an active kinase. In addition to actin cytoskeleton regulation, ILK also influences the microtubule network and mitotic spindle orientation. The pseudokinase domain of ILK binds several adaptor proteins including the parvins and paxillin. The ILK subfamily is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270959 [Multi-domain]  Cd Length: 251  Bit Score: 39.39  E-value: 9.30e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720423198   36 RMGLEIARGLAHLHSHNYVHSDLAL--RNCLLTSDLTVRI--GDYGLAHSNykedyyltPERLWVPlRWAAPELLGELHG 111
Cdd:cd14057     98 KFALDIARGMAFLHTLEPLIPRHHLnsKHVMIDEDMTARInmADVKFSFQE--------PGKMYNP-AWMAPEALQKKPE 168
                           90       100
                   ....*....|....*....|...
gi 1720423198  112 SFvlvdQSRESNVWSLGVTLWEL 134
Cdd:cd14057    169 DI----NRRSADMWSFAILLWEL 187
STKc_beta_ARK cd05606
Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs ...
40-94 9.64e-03

Catalytic domain of the Serine/Threonine Kinase, beta-adrenergic receptor kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. The beta-ARK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270757 [Multi-domain]  Cd Length: 279  Bit Score: 39.34  E-value: 9.64e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720423198   40 EIARGLAHLHSHNYVHSDLALRNCLLTSDLTVRIGDYGLA--------HSNYKEDYYLTPERL 94
Cdd:cd05606    106 EVILGLEHMHNRFIVYRDLKPANILLDEHGHVRISDLGLAcdfskkkpHASVGTHGYMAPEVL 168
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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