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Conserved domains on  [gi|1907122621|ref|XP_036016233|]
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lutropin-choriogonadotropic hormone receptor isoform X7 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
316-494 2.50e-112

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15359:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 275  Bit Score: 335.30  E-value: 2.50e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 316 TRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15359    97 TLTVITLERWHTITYAMQLDRKLRLRHAILIMLGGWVFSLLIAVLPLVGVSNYMKVSICLPMDIETLLSQAYILLILVLN 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVN 475
Cdd:cd15359   177 VIAFLVICACYIKIYLAVQNPELVAKNKDTKIAKRMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKILLVLFYPIN 256
                         170
                  ....*....|....*....
gi 1907122621 476 SCANPFLYAVFTKAFQRDF 494
Cdd:cd15359   257 SCANPFLYAIFTKAFRRDF 275
LRR_5 super family cl37855
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ...
66-204 9.42e-10

BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.


The actual alignment was detected with superfamily member pfam13306:

Pssm-ID: 463839 [Multi-domain]  Cd Length: 127  Bit Score: 56.78  E-value: 9.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621  66 KVIPSQAFRGLNeVVKIEISqsDSLERIEANAFDNLLNLSEILIQNtkNLLYIEPGAFTNlprlkylsiCNTGIRTLPD- 144
Cdd:pfam13306   1 TSIGSYAFYNCS-LTSITIP--SSLTSIGEYAFSNCTSLKSITLPS--SLTSIGSYAFYN---------CSLTSITIPSs 66
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907122621 145 VSKISSSEFNFileiCDNLY-------ITTIPGNAFQGMNNESITLklyGNGFEEVQSHAFNGTTLI 204
Cdd:pfam13306  67 LTSIGEYAFSN----CSNLKsitlpsnLTSIGSYAFSNCSLKSITI---PSSVTTIGSYAFSNCSNL 126
 
Name Accession Description Interval E-value
7tmA_LHCGR cd15359
luteinizing hormone-choriogonadotropin receptor, member of the class A family of ...
316-494 2.50e-112

luteinizing hormone-choriogonadotropin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. LHCGR is expressed predominantly in the ovary and testis, and plays an essential role in sexual development and reproductive processes. LHCGR couples primarily to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production.


Pssm-ID: 320481 [Multi-domain]  Cd Length: 275  Bit Score: 335.30  E-value: 2.50e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 316 TRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15359    97 TLTVITLERWHTITYAMQLDRKLRLRHAILIMLGGWVFSLLIAVLPLVGVSNYMKVSICLPMDIETLLSQAYILLILVLN 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVN 475
Cdd:cd15359   177 VIAFLVICACYIKIYLAVQNPELVAKNKDTKIAKRMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKILLVLFYPIN 256
                         170
                  ....*....|....*....
gi 1907122621 476 SCANPFLYAVFTKAFQRDF 494
Cdd:cd15359   257 SCANPFLYAIFTKAFRRDF 275
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
319-483 3.66e-18

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 84.27  E-value: 3.66e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMK----VSICLPMDVESTLSQVYILsiLLL 394
Cdd:pfam00001  78 AISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVpegnVTVCFIDFPEDLSKPVSYT--LLI 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NAVAFV----VICACYVRIYFAVQNPELTAPN-----KDTKIAKKMAILIFTDFTCMAPISFFAISAAF----KVPLITV 461
Cdd:pfam00001 156 SVLGFLlpllVILVCYTLIIRTLRKSASKQKSsertqRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLaldcELSRLLD 235
                         170       180
                  ....*....|....*....|..
gi 1907122621 462 TNSKVLLVLFYpVNSCANPFLY 483
Cdd:pfam00001 236 KALSVTLWLAY-VNSCLNPIIY 256
LRR_5 pfam13306
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ...
66-204 9.42e-10

BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.


Pssm-ID: 463839 [Multi-domain]  Cd Length: 127  Bit Score: 56.78  E-value: 9.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621  66 KVIPSQAFRGLNeVVKIEISqsDSLERIEANAFDNLLNLSEILIQNtkNLLYIEPGAFTNlprlkylsiCNTGIRTLPD- 144
Cdd:pfam13306   1 TSIGSYAFYNCS-LTSITIP--SSLTSIGEYAFSNCTSLKSITLPS--SLTSIGSYAFYN---------CSLTSITIPSs 66
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907122621 145 VSKISSSEFNFileiCDNLY-------ITTIPGNAFQGMNNESITLklyGNGFEEVQSHAFNGTTLI 204
Cdd:pfam13306  67 LTSIGEYAFSN----CSNLKsitlpsnLTSIGSYAFSNCSLKSITI---PSSVTTIGSYAFSNCSNL 126
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
55-278 3.59e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 39.92  E-value: 3.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621  55 LARLSLTYLPVKVIPSqAFRGLNEVVKIEISQSDsLERIeANAFDNLLNLSEILIQNtkNLLYIEPGAFTNLPRLKYLSI 134
Cdd:COG4886   161 LKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQ-ITDL-PEPLGNLTNLEELDLSG--NQLTDLPEPLANLTNLETLDL 235
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 135 CNTGIRTLPDVSKISSSEfnfILEICDNlYITTIPGNAfqGMNNESiTLKLYGNGFEEVQ-SHAFNGTTLISLELKENIY 213
Cdd:COG4886   236 SNNQLTDLPELGNLTNLE---ELDLSNN-QLTDLPPLA--NLTNLK-TLDLSNNQLTDLKlKELELLLGLNSLLLLLLLL 308
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907122621 214 LEKMHSGTFQGATGPSILDVSSTKLQALPSHGLESIQTLIATSSYSLKTLPSREKFTSLLVATLT 278
Cdd:COG4886   309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLG 373
 
Name Accession Description Interval E-value
7tmA_LHCGR cd15359
luteinizing hormone-choriogonadotropin receptor, member of the class A family of ...
316-494 2.50e-112

luteinizing hormone-choriogonadotropin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. LHCGR is expressed predominantly in the ovary and testis, and plays an essential role in sexual development and reproductive processes. LHCGR couples primarily to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production.


Pssm-ID: 320481 [Multi-domain]  Cd Length: 275  Bit Score: 335.30  E-value: 2.50e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 316 TRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15359    97 TLTVITLERWHTITYAMQLDRKLRLRHAILIMLGGWVFSLLIAVLPLVGVSNYMKVSICLPMDIETLLSQAYILLILVLN 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVN 475
Cdd:cd15359   177 VIAFLVICACYIKIYLAVQNPELVAKNKDTKIAKRMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKILLVLFYPIN 256
                         170
                  ....*....|....*....
gi 1907122621 476 SCANPFLYAVFTKAFQRDF 494
Cdd:cd15359   257 SCANPFLYAIFTKAFRRDF 275
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
315-494 3.12e-101

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 306.83  E-value: 3.12e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 315 ITRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLL 394
Cdd:cd15136    96 FTLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWIFALIMALLPLVGVSSYSKTSICLPFETETPVSKAYVIFLLLF 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NAVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPV 474
Cdd:cd15136   176 NGLAFLIICGCYIKIYLSVRGSGRAANSNDTRIAKRMALLVFTDFLCWAPIAFFGLTAAFGLPLISVSNAKILLVFFYPL 255
                         170       180
                  ....*....|....*....|
gi 1907122621 475 NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15136   256 NSCANPFLYAIFTKQFRRDC 275
7tmA_FSH-R cd15360
follicle-stimulating hormone receptor, member of the class A family of seven-transmembrane G ...
320-494 6.47e-94

follicle-stimulating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. FSH-R functions in gonad development and is found in the ovary, testis, and uterus. Defects in this receptor cause ovarian dysgenesis type 1, and also ovarian hyperstimulation syndrome. The FSH-R activation couples to the G(s)-protein and stimulates adenylate cyclase, thereby promoting cAMP production.


Pssm-ID: 320482  Cd Length: 275  Bit Score: 288.30  E-value: 6.47e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLNAVAF 399
Cdd:cd15360   101 ITLERWHTITYAMQLDRKVRLRHAAVIMVGGWIFAFTVALLPIFGISSYMKVSICLPMDIESPLSQAYIIFILVLNVLAF 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 400 VVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCAN 479
Cdd:cd15360   181 LIICACYIKIYLTVRNPNFVSSNSDTKIAKRMAVLIFTDFLCMAPISFFAISASLKVPLITVSKSKILLVLFYPINSCAN 260
                         170
                  ....*....|....*
gi 1907122621 480 PFLYAVFTKAFQRDF 494
Cdd:cd15360   261 PFLYAIFTKTFRRDF 275
7tmA_TSH-R cd15964
thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family ...
316-493 1.33e-92

thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. TSH-R plays an important role thyroid physiology, and its activation stimulates the production of thyroxine (T4) and triiodothyronine (T3). Defects in TSH-R are a cause of several types of hyperthyroidism. The receptor is predominantly found on the surface of the thyroid epithelial cells and couples to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production. TSH and cAMP stimulate thyroid cell proliferation, differentiation, and function.


Pssm-ID: 320630 [Multi-domain]  Cd Length: 275  Bit Score: 284.87  E-value: 1.33e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 316 TRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15964    97 TLTVITLERWYAITFAMRLDRKIRLRHASAIMLGGWVFCFLLALLPLVGVSSYAKVSICLPMDTETPLAQAYIVFVLMLN 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVN 475
Cdd:cd15964   177 IIAFVIICACYIKIYITVRNPQYKSGDKDTKIAKRMAVLIFTDFICMAPISFYALSAILNKPLITVSNSKILLVLFYPLN 256
                         170
                  ....*....|....*...
gi 1907122621 476 SCANPFLYAVFTKAFQRD 493
Cdd:cd15964   257 SCANPFLYAIFTKAFRRD 274
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
319-494 1.55e-44

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 159.33  E-value: 1.55e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLdQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSS-------YMKVSICLPMDVESTLSQVYILSI 391
Cdd:cd14980   101 LITLDRYICIVYPFSN-KRLSYKSAKIILILGWLFSIIFAAIPILYSINqpgdnrlYGYSSICMPSNVSNPYYRGWLIAY 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLNAVAFVVICACYVRIYFAVQNPELTA----PNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVL 467
Cdd:cd14980   180 LLLTFIAWIIICILYILIFISVRKSRKSArrssSKRDKRIAIRLALILITDLICWLPYYIVIFSGLLTSTEIDIHVLQFI 259
                         170       180
                  ....*....|....*....|....*..
gi 1907122621 468 LVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14980   260 AILALPLNSAINPYLYTLTTPTFKRDF 286
7tmA_Relaxin_R cd15137
relaxin family peptide receptors, member of the class A family of seven-transmembrane G ...
319-492 8.76e-23

relaxin family peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes relaxin/insulin-like family peptide receptor 1 (RXFP1 or LGR7) and 2 (RXFP2 or LGR8), which contain a very large extracellular N-terminal domain with numerous leucine-rich repeats responsible for hormone recognition and binding. Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural but low sequence similarity, and exert their physiological functions by activating a group of four GPCRs, RXFP1-4. Relaxin and INSL3 are the endogenous ligands for RXFP1 and RXFP2, respectively. Upon receptor binding, relaxin activates a variety of signaling pathways to produce second messengers such as cAMP.


Pssm-ID: 320265 [Multi-domain]  Cd Length: 284  Bit Score: 98.43  E-value: 8.76e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQlDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSS----YMKVSICLPM--DVESTLSQVYILSI- 391
Cdd:cd15137   100 LITLDRFICIVFPFS-GRRLGLRRAIIVLACIWLIGLLLAVLPLLPWDYfgnfYGRSGVCLPLhiTDERPAGWEYSVFVf 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLNAVAFVVICACYVRIYFAVQ----NPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPlITVTNSKVL 467
Cdd:cd15137   179 LGLNFLAFVFILLSYIAMFISIRrtrkAAASRKSKRDMAVAKRFFLIVLTDFLCWIPIIVIGILALSGVP-IPGEVYAWV 257
                         170       180
                  ....*....|....*....|....*
gi 1907122621 468 LVLFYPVNSCANPFLYAVFTKAFQR 492
Cdd:cd15137   258 AVFVLPINSALNPILYTLSTPKFRK 282
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
319-486 1.45e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 85.80  E-value: 1.45e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVG--VSSYMKVSICLPMDVESTLSQVYILSILLLN- 395
Cdd:cd00637    91 AISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGwgVYDYGGYCCCCLCWPDLTLSKAYTIFLFVLLf 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQN------------PELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTN 463
Cdd:cd00637   171 LLPLLVIIVCYVRIFRKLRRhrrrirssssnsSRRRRRRRERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPR 250
                         170       180
                  ....*....|....*....|....
gi 1907122621 464 S-KVLLVLFYPVNSCANPFLYAVF 486
Cdd:cd00637   251 IlYFLALLLAYLNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
319-483 3.66e-18

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 84.27  E-value: 3.66e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMK----VSICLPMDVESTLSQVYILsiLLL 394
Cdd:pfam00001  78 AISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVpegnVTVCFIDFPEDLSKPVSYT--LLI 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NAVAFV----VICACYVRIYFAVQNPELTAPN-----KDTKIAKKMAILIFTDFTCMAPISFFAISAAF----KVPLITV 461
Cdd:pfam00001 156 SVLGFLlpllVILVCYTLIIRTLRKSASKQKSsertqRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLaldcELSRLLD 235
                         170       180
                  ....*....|....*....|..
gi 1907122621 462 TNSKVLLVLFYpVNSCANPFLY 483
Cdd:pfam00001 236 KALSVTLWLAY-VNSCLNPIIY 256
7tmA_LRR_GPR cd15138
orphan leucine-rich repeat-containing G protein-coupled receptors, member of the class A ...
321-494 8.97e-18

orphan leucine-rich repeat-containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes leucine-rich repeat-containing G-protein coupled receptor 4 (LGR4), 5 (LGR5), and 6 (LGR6). These receptors contain a subfamily of receptors related to the glycoprotein hormone receptor family, which includes the luteinizing hormone (LH) receptor, the follicle-stimulating hormone (FSH) receptor, and the pituitary thyroid-stimulating hormone (TSH) receptor. LGR4-6 are receptors for the R-spondin (Rspo) family of secreted proteins containing two N-terminal furin-like repeats and a thrombospondin domain. The RSPO proteins are involved in regulating proliferation and differentiation of adult stem cells by potently enhancing the WNT-stimulated beta-catenin signaling. LGR4 is broadly expressed in proliferating cells, and its deficient mice display development defects in multiple organs. LGR5 acts as a marker for resident stem cell in numerous epithelial cell layers, including small intestine, colon, stomach, and kidney. LGR6 also serves as a marker of multipotent stem cells in the hair follicle that generate all skin cell lineages. Members of this group are characterized by a very large extracellular N-terminal domain containing 17 leucine-rich repeats (LRRs), flanked by cysteine-rich N- and C-terminal capping domains, and the extracellular domain is responsible for high-affinity binding with the Rspo proteins.


Pssm-ID: 320266  Cd Length: 274  Bit Score: 83.75  E-value: 8.97e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 321 TLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLNAVAFV 400
Cdd:cd15138   102 AVERSLSVKDIMKNGKSNHLKSFRVAALLCFLLATVAAAFPLFHRGEYGASPLCLPFPTGEPPSLGFTVALVLLNSLCFL 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 401 VICACYVRIYFAVQNPELTApNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCANP 480
Cdd:cd15138   182 LMAVAYTKLYCNLEKGDLEE-NWDCSMVKHVAWLIFTNCILFCPVAFLSFASLITLISISPEIMKSVLLVVFPLPACLNP 260
                         170
                  ....*....|....
gi 1907122621 481 FLYAVFTKAFQRDF 494
Cdd:cd15138   261 LLYVLFNPHFKEDL 274
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
319-494 3.72e-17

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 81.46  E-value: 3.72e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVG----VSSYMKVSICLPmdvesTLSQVYILSILLL 394
Cdd:cd14967    92 AISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGwrdeTQPSVVDCECEF-----TPNKIYVLVSSVI 166
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NAVA-FVVICACYVRIYFAVQnpeltapnKDTKIAKKMAILIFTDFTCMAP-ISFFAISAAFKVPLITVTNSKVLLVLFY 472
Cdd:cd14967   167 SFFIpLLIMIVLYARIFRVAR--------RELKAAKTLAIIVGAFLLCWLPfFIIYLVSAFCPPDCVPPILYAVFFWLGY 238
                         170       180
                  ....*....|....*....|..
gi 1907122621 473 pVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14967   239 -LNSALNPIIYALFNRDFRRAF 259
7tmA_LGR5 cd15363
leucine-rich repeats-containing G protein-coupled receptor 5, member of the class A family of ...
322-493 1.43e-16

leucine-rich repeats-containing G protein-coupled receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The leucine-rich repeat containing G-protein coupled receptor LGR6, together with its family members LGR4 and LGR5, is structurally related to the glycoprotein hormone receptor family, which includes the luteinizing hormone (LH) receptor, the follicle-stimulating hormone (FSH) receptor, and the pituitary thyroid-stimulating hormone (TSH) receptor. LGR4-6 are receptors for the R-spondin (Rspo) family of secreted proteins containing two N-terminal furin-like repeats and a thrombospondin domain. The Rspo proteins are involved in regulating proliferation and differentiation of adult stem cells by potently enhancing the WNT-stimulated beta-catenin signaling. LGR6 serves as a marker of multipotent stem cells in the hair follicle that generate all skin cell lineages, whereas LGR5 is a marker for resident stem cell in numerous epithelial cell layers, including small intestine, colon, stomach, and kidney. In addition, LGR4 is broadly expressed in proliferating cells, and its deficient mice display development defects in multiple organs. Members of this group are characterized by a very large extracellular N-terminal domain containing 17 leucine-rich repeats (LRRs), flanked by cysteine-rich N- and C-terminal capping domains, and the extracellular domain is responsible for high-affinity binding with the Rspo proteins.


Pssm-ID: 320485  Cd Length: 274  Bit Score: 79.89  E-value: 1.43e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 322 LERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLNAVAFVV 401
Cdd:cd15363   103 LERGFSVKCSTKFETKSPFLSLKAIILLCFLLALTIAVIPLLGGSEYGASPLCLPLPFGEPSAMGYMVALVLLNSLCFLV 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 402 ICACYVRIYFAVQNPELTAPnKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCANPF 481
Cdd:cd15363   183 MTIAYTKLYCSLEKGELENI-WDCSMVKHIALLLFTNCILYCPVAFLSFSSLLNLTFISPEVIKFILLVIVPLPACLNPL 261
                         170
                  ....*....|..
gi 1907122621 482 LYAVFTKAFQRD 493
Cdd:cd15363   262 LYILFNPHFKED 273
7tmA_LGR4 cd15361
leucine-rich repeats-containing G protein-coupled receptor 4, member of the class A family of ...
339-494 1.26e-14

leucine-rich repeats-containing G protein-coupled receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The leucine-rich repeat containing G-protein coupled receptor Lgr4 (formerly known as Gpr48), together with its close family members LGR5 and LGR6, is structurally related to the glycoprotein hormone receptor family, which includes the luteinizing hormone (LH) receptor, the follicle-stimulating hormone (FSH) receptor, and the pituitary thyroid-stimulating hormone (TSH) receptor. LGR4-6 are receptors for the R-spondin (Rspo) family of secreted proteins containing two N-terminal furin-like repeats and a thrombospondin domain. The Rspo proteins are involved in regulating proliferation and differentiation of adult stem cells by potently enhancing the WNT-stimulated beta-catenin signaling. LGR4 is broadly expressed in proliferating cells, and its deficient mice display development defects in multiple organs. LGR5 acts as a marker for resident stem cell in numerous epithelial cell layers, including small intestine, colon, stomach, and kidney. LGR6 also serves as a marker of multipotent stem cells in the hair follicle that generate all skin cell lineages. Members of this group are characterized by a very large extracellular N-terminal domain containing 17 leucine-rich repeats (LRRs), flanked by cysteine-rich N- and C-terminal capping domains, and the extracellular domain is responsible for high-affinity binding with the Rspo proteins.


Pssm-ID: 320483  Cd Length: 274  Bit Score: 74.13  E-value: 1.26e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 339 RLRHAIPIMLGGwIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLNAVAFVVICACYVRIYFAVQNPEL 418
Cdd:cd15361   121 LRQFQIAALLAF-LVATAAGCLPLFHGGEYSASPLCLPFPTGETPSLGFTVTLVLLNSLAFLLMAVIYTKLYCNLEKEDL 199
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907122621 419 TAPNKDTKIaKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15361   200 SENSQSSMI-KHVAWLIFTNCIFFCPVAFFSFAPLITAISISPEIMKSVTLIFFPLPACLNPVLYVFFNPKFKEDW 274
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
320-492 1.85e-14

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 73.78  E-value: 1.85e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQlDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYM----KVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd14969    94 LAFERYLVIVRPLK-AFRLSKRRALILIAFIWLYGLFWALPPLFGWSSYVpeggGTSCSVDWYSKDPNSLSYIVSLFVFC 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 -AVAFVVICACYVRIYFAVQN-------PELTAPNKDT-----KIAKKMAILIFTDFTCMAPISFFAISAAF----KVPL 458
Cdd:cd14969   173 fFLPLAIIIFCYYKIYRTLRKmskraarRKNSAITKRTkkaekKVAKMVLVMIVAFLIAWTPYAVVSLYVSFggesTIPP 252
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907122621 459 ITVTnskvLLVLFYPVNSCANPFLYAVFTKAFQR 492
Cdd:cd14969   253 LLAT----IPALFAKSSTIYNPIIYVFMNKQFRR 282
7tmA_LGR6 cd15362
leucine-rich repeats-containing G protein-coupled receptor 6, the class A of 7-transmembrane ...
354-494 1.57e-13

leucine-rich repeats-containing G protein-coupled receptor 6, the class A of 7-transmembrane GPCRs; The leucine-rich repeat containing G-protein coupled receptor LGR5, together with its family members LGR4 and LGR6, is structurally related to the glycoprotein hormone receptor family, which includes the luteinizing hormone (LH) receptor, the follicle-stimulating hormone (FSH) receptor, and the pituitary thyroid-stimulating hormone (TSH) receptor. LGR4-6 are receptors for the R-spondin (Rspo) family of secreted proteins containing two N-terminal furin-like repeats and a thrombospondin domain. The Rspo proteins are involved in regulating proliferation and differentiation of adult stem cells by potently enhancing the WNT-stimulated beta-catenin signaling. LGR5 serves as a marker for resident stem cell in numerous epithelial cell layers, including small intestine, colon, stomach, and kidney. LGR6 is a marker for multipotent stem cells in the hair follicle that generate all skin cell lineages. In addition, LGR4 is broadly expressed in proliferating cells, and its deficient mice display development defects in multiple organs. Members of this group are characterized by a very large extracellular N-terminal domain containing 17 leucine-rich repeats (LRRs), flanked by cysteine-rich N- and C-terminal capping domains, and the extracellular domain is responsible for high-affinity binding with the Rspo proteins.


Pssm-ID: 320484  Cd Length: 276  Bit Score: 70.98  E-value: 1.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 354 STLMATLPLVGVSSYMKVSICLPMDVESTLSQV--YILSILLLNAVAFVVICACYVRIYFAVQNPELTAPnKDTKIAKKM 431
Cdd:cd15362   135 SLTAAALPLFSVGEYGASPLCLPSPLPDGKPSTlgFTVALIMMNTLCFLVITGTYIKLYCDLLKGEFDAI-WDCAMIKHV 213
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907122621 432 AILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15362   214 AWLIFTNCLLYCPVAFLTFSSLLNLFPISPEVIKSVLLVVLPLPACLNPLLYLLFNPHFRDDL 276
7tmA_RXFP1_LGR7 cd15965
relaxin receptor 1 (or LGR7), member of the class A family of seven-transmembrane G ...
319-491 5.53e-13

relaxin receptor 1 (or LGR7), member of the class A family of seven-transmembrane G protein-coupled receptors; Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural but low sequence similarity, and exert their physiological functions by activating a group of four G protein-coupled receptors, RXFP1-4. Relaxin is the endogenous ligand for RXFP1, which has a large extracellular N-terminal domain containing 10 leucine-rich repeats and a unique low-density lipoprotein type A (LDLa) module which is necessary for receptor activation. Upon receptor binding, relaxin activates a variety of signaling pathways to produce second messengers such as cAMP and nitric oxide. RXFP1 is expressed in various tissues including uterus, ovary, placenta, cerebral cortex, heart, lung and kidney, among others.


Pssm-ID: 320631 [Multi-domain]  Cd Length: 287  Bit Score: 69.51  E-value: 5.53e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLdQKLRLRHAIPIMLGGWIFSTLMATLPLVGV----SSYMKVSICLPM---DVESTLSQVYILSI 391
Cdd:cd15965   100 YLTLEKYICIVYPFRC-LTPGKCRTITILILIWIIGFIIAFIPLSNKeffrNYYGTNGVCFPLhseQPESTGAQIYSVVI 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LL-LNAVAFVVICACYVRIYFAVQNPELTAP------NKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLI-TVTN 463
Cdd:cd15965   179 FLgLNLAAFIIIVFSYGSMFYSIHQTAIMATeisnhiKKEMTLAKRFFFIVFTDALCWIPIFILKLLSLLQVEIPgTISS 258
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 464 SKVLLVLfyPVNSCANPFLYAVFTKAFQ 491
Cdd:cd15965   259 WVVIFIL--PINSALNPILYTLTTRPFK 284
LRR_5 pfam13306
BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich ...
66-204 9.42e-10

BspA type Leucine rich repeat region (6 copies); This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.


Pssm-ID: 463839 [Multi-domain]  Cd Length: 127  Bit Score: 56.78  E-value: 9.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621  66 KVIPSQAFRGLNeVVKIEISqsDSLERIEANAFDNLLNLSEILIQNtkNLLYIEPGAFTNlprlkylsiCNTGIRTLPD- 144
Cdd:pfam13306   1 TSIGSYAFYNCS-LTSITIP--SSLTSIGEYAFSNCTSLKSITLPS--SLTSIGSYAFYN---------CSLTSITIPSs 66
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907122621 145 VSKISSSEFNFileiCDNLY-------ITTIPGNAFQGMNNESITLklyGNGFEEVQSHAFNGTTLI 204
Cdd:pfam13306  67 LTSIGEYAFSN----CSNLKsitlpsnLTSIGSYAFSNCSLKSITI---PSSVTTIGSYAFSNCSNL 126
7tmA_RXFP2_LGR8 cd15966
relaxin receptor 2 (or LGR8), member of the class A family of seven-transmembrane G ...
319-491 1.39e-08

relaxin receptor 2 (or LGR8), member of the class A family of seven-transmembrane G protein-coupled receptors; Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural similarity, but low sequence similarity, and exert their physiological functions by activating a group of four G protein-coupled receptors, RXFP1-4. INSL3 is the endogenous ligand for RXFP2, which couples to the G(s) protein to increase intracellular cAMP levels, but also to the GoB protein to decrease cAMP formation. RXFP2 (or LGR8) is expressed in various tissues including the brain, kidney, muscle, testis, thyroid, uterus, and peripheral blood cells, among others.


Pssm-ID: 320632  Cd Length: 287  Bit Score: 56.33  E-value: 1.39e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQlDQKLRLRHAIPIMLGGWIFSTLMATLPLVGV----SSYMKVSICLPM---DVESTLSQVYILSI 391
Cdd:cd15966   100 YLTLEKYLVIVFPFS-NIRPGKCQTLIILISIWLVGFIIAVIPFWNEdffgNYYGKNGVCFPLhsdQTEKIGAKGYSTGI 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LL-LNAVAFVVICACYVRIYFAVQNPELTAP------NKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLI-TVTN 463
Cdd:cd15966   179 FLgLNLLAFIIIVFSYSSMFCSIQKTGLQTTevrshiHRDVAVANRFFFIVFSDAICWIPIFLLKILSLFQVEIPgTITS 258
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 464 SKVLLVLfyPVNSCANPFLYAVFTKAFQ 491
Cdd:cd15966   259 WIVIFIL--PINSALNPILYTLTTSFFK 284
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
324-494 5.49e-08

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 54.22  E-value: 5.49e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 324 RWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMaTLPLVGVSSYMK----VSICLPM--DVESTLSQVYILSILLLN-A 396
Cdd:cd14970    97 RYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVL-GLPVIIFARTLQeeggTISCNLQwpDPPDYWGRVFTIYTFVLGfA 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VAFVVICACYVRIYFAV--QNPELTAPNKD-----TKIAKKMAILIFTDFTCMAPISFFAI---SAAFKVPLITVTNSKV 466
Cdd:cd14970   176 VPLLVITVCYSLIIRRLrsSRNLSTSGAREkrrarRKVTRLVLVVVAVFVVCWLPFHVFQIvrlLIDPPETLTVVGVFLF 255
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 467 LLVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14970   256 CIALSY-ANSCLNPILYAFLDENFRKSF 282
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
333-493 6.53e-08

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 54.20  E-value: 6.53e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 333 QLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSY----MKVSICLPMDV--ESTLSQVYILSILLLN-AVAFVVICAC 405
Cdd:cd15074   106 PYGPKLSRRHVCIVIVAIWLYALFWAVAPLVGWGSYgpepFGTSCSIDWTGasASVGGMSYIISIFIFCyLLPVLIIVFS 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 406 YVRIYFAVQNPELTAPNKDTKIAK---------KMAILIFTDF----TCMAPISFFAI-SAAFKVPLITvtnsKVLLVLF 471
Cdd:cd15074   186 YVKIIRKVKSSRKRVAGFDSRSKRqhkierkvtKVAVLICAGFliawTPYAVVSMWSAfGSPDSVPILA----SILPALF 261
                         170       180
                  ....*....|....*....|..
gi 1907122621 472 YPVNSCANPFLYAVFTKAFQRD 493
Cdd:cd15074   262 AKSSCMYNPIIYLLFSSKFRQD 283
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
320-494 1.83e-07

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 52.99  E-value: 1.83e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQldQKLRLRHAIPIMLGGWIFSTLMAtLPL-----VGVSSYMKVSICLPMDVESTLSQVY-----IL 389
Cdd:cd15203    94 IAIDRYQLIVYPTR--PRMSKRHALLIIALIWILSLLLS-LPLaifqeLSDVPIEILPYCGYFCTESWPSSSSrliytIS 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 390 SILLLNAVAFVVICACYVRIYFAVQN--------PELTAPNKDTKIAKK-----MAILIFTDFT-CMAPISFFAISAAFK 455
Cdd:cd15203   171 VLVLQFVIPLLIISFCYFRISLKLRKrvkkkrgkRTLSSRRRRSELRRKrrtnrLLIAMVVVFAvCWLPLNLFNLLRDFE 250
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1907122621 456 VPLITVTNSKVLLVLFYPV----NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15203   251 PLPQIDGRHFYLIFLICHLiamsSACVNPLLYGWLNDNFRKEF 293
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
320-494 7.27e-07

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 50.66  E-value: 7.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKvsiclPMDVESTLSQ---VYILSILLLNA 396
Cdd:cd15326    94 ISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIGPLLGWKEPAP-----PDDKVCEITEepfYALFSSLGSFY 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VAFVVICACYVRIYF-AVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISffAISAAFKVPlitVTNSKVLLVLFYpVN 475
Cdd:cd15326   169 IPLIVILVMYCRVYIvALKFSREKKAAKTLGIVVGMFILCWLPFFIALPLG--SLFSHLKPP---ETLFKIIFWLGY-FN 242
                         170
                  ....*....|....*....
gi 1907122621 476 SCANPFLYAVFTKAFQRDF 494
Cdd:cd15326   243 SCLNPIIYPCSSKEFKRAF 261
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
320-494 1.41e-06

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 50.29  E-value: 1.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFS-TLMATLPLV-------GVSSYMK-VSICL---PMDVESTLSQVY 387
Cdd:cd14993    94 ISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAiIIMLPLLVVyeleeiiSSEPGTItIYICTedwPSPELRKAYNVA 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 388 ILSILLLnaVAFVVICACYVRIYFAV---QNPELTAPNKDT----------KIAKKMAILIFTDFTCMAPISFFAISAAF 454
Cdd:cd14993   174 LFVVLYV--LPLLIISVAYSLIGRRLwrrKPPGDRGSANSTssrrilrskkKVARMLIVVVVLFALSWLPYYVLSILLDF 251
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1907122621 455 KVPLITVTNSKVLLVLFYPV-----NSCANPFLYAVFTKAFQRDF 494
Cdd:cd14993   252 GPLSSEESDENFLLILPFAQllgysNSAINPIIYCFMSKKFRRGF 296
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
320-494 2.13e-06

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 49.67  E-value: 2.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAvqLDQKLRLRHAIPIMLGGWIFSTLMAtLPLV---GVSSYMKVS----ICLPMDVESTLSQVYILSIL 392
Cdd:cd15392    95 ISIDRYVAIMWP--LRPRMTKRQALLLIAVIWIFALATA-LPIAitsRLFEDSNAScgqyICTESWPSDTNRYIYSLVLM 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLN-AVAFVVICACYVRIYFAVQN---PELTAPNKDTKIAK------KMAILIFTDFT-CMAPISFFAIsaafkVPLI-- 459
Cdd:cd15392   172 ILQyFVPLAVLVFTYTRIGIVVWAkrtPGEAENNRDQRMAEskrklvKMMITVVAIFAlCWLPLNILNL-----VGDHde 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1907122621 460 TVTNSKVLLVLFYPV------NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15392   247 SIYSWPYIPYLWLAAhwlamsHCCYNPFIYCWMNAKFRNGF 287
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
319-494 2.83e-06

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 49.19  E-value: 2.83e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFsTLMATLPLVGVSSYMKVS----ICLP-MDVESTLSQVYILSILL 393
Cdd:cd14982    93 CISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWIL-VLVASVPLLLLRSTIAKEnnstTCFEfLSEWLASAAPIVLIALV 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LN-AVAFVVICACYVRIYFAVQNPELTAPNKDTKI-AKKMAILIFTDFT-CMAPI-SFFAISAAFKVPLITVTNSKVLLV 469
Cdd:cd14982   172 VGfLIPLLIILVCYSLIIRALRRRSKQSQKSVRKRkALRMILIVLAVFLvCFLPYhVTRILYLLVRLSFIADCSARNSLY 251
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907122621 470 LFYPV-------NSCANPFLYAVFTKAFQRDF 494
Cdd:cd14982   252 KAYRItlclaslNSCLDPLIYYFLSKTFRKRL 283
7tmA_Anaphylatoxin_R-like cd14974
anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class ...
319-494 2.83e-06

anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes anaphylatoxin receptors, formyl peptide receptors (FPR), prostaglandin D2 receptor 2, GPR1, and related chemokine receptors. The anaphylatoxin receptors are a group of G-protein coupled receptors that bind anaphylatoxins. The members of this group include C3a and C5a receptors. The formyl peptide receptors (FPRs) are chemoattractant GPCRs that involved in mediating immune responses to infection. They are expressed mainly on polymorphonuclear and mononuclear phagocytes and bind N-formyl-methionyl peptides (FMLP), which are derived from the mitochondrial proteins of ruptured host cells or invading pathogens. Chemokine receptor-like 1 (also known as chemerin receptor 23) is a GPCR for the chemoattractant adipokine chemerin, also known as retinoic acid receptor responder protein 2 (RARRES2), and for the omega-3 fatty acid derived molecule resolvin E1. Interaction with chemerin induces activation of the MAPK and PI3K signaling pathways leading to downstream functional effects, such as a decrease in immune responses, stimulation of adipogenesis, and angiogenesis. On the other hand, resolvin E1 negatively regulates the cytokine production in macrophages by reducing the activation of MAPK1/3 and NF-kB pathways. Prostaglandin D2 receptor, also known as CRTH2, is a chemoattractant G-protein coupled receptor expressed on T helper type 2 cells that binds prostaglandin D2 (PGD2). PGD2 functions as a mast cell-derived mediator to trigger asthmatic responses and also causes vasodilation. PGD2 exerts its inflammatory effects by binding to two G-protein coupled receptors, the D-type prostanoid receptor (DP) and PD2R2 (CRTH2). PD2R2 couples to the G protein G(i/o) type which leads to a reduction in intracellular cAMP levels and an increase in intracellular calcium. GPR1 is an orphan receptor that can be activated by the leukocyte chemoattractant chemerin, thereby suggesting that some of the anti-inflammatory actions of chemerin may be mediated through GPR1.


Pssm-ID: 320105 [Multi-domain]  Cd Length: 274  Bit Score: 49.22  E-value: 2.83e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMaTLPLVG----VSSYMKVSICLPMDVESTLSQ----VYILS 390
Cdd:cd14974    92 AISLDRCLLVLHPVWAQNHRTVRLASVVCVGIWILALVL-SVPYFVfrdtVTHHNGRSCNLTCVEDYDLRRsrhkALTVI 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 391 ILLLN-AVAFVVICACYVRIYFAVQNPELTAPNKDTKIakkMAILIFTDFTCMAPISFFA---ISAAFKVPLITVTNSKV 466
Cdd:cd14974   171 RFLCGfLLPLLIIAICYSVIAVKLRRKRLAKSSKPLRV---LLAVVVAFFLCWLPYHVFAlleLVAAAGLPEVVLLGLPL 247
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 467 LLVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14974   248 ATGLAY-FNSCLNPILYVFMGQDFRKRL 274
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
320-494 4.41e-06

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 48.48  E-value: 4.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSS--YMKVSICLPMD-----VESTLSQVYILSIL 392
Cdd:cd15064    94 IALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFGWRTpdSEDPSECLISQdigytIFSTFGAFYIPLLL 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLnavafvvicACYVRIYFAVQnpeltapnKDTKIAKKMAILIFTDFTCMAPisFFAISAAfkVPLITVTN-----SKVL 467
Cdd:cd15064   174 ML---------ILYWKIYRAAA--------RERKAAKTLGIILGAFIVCWLP--FFLVALI--VPLCSHCWiplalKSFF 232
                         170       180
                  ....*....|....*....|....*..
gi 1907122621 468 LVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15064   233 LWLGY-FNSLINPLIYTFFNKDFRKAF 258
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
320-494 9.36e-06

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 47.36  E-value: 9.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMK---VSICLPMDVESTlsqvyILSILLLNA 396
Cdd:cd15061    93 ISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVGPSWHGRrglGSCYYTYDKGYR-----IYSSMGSFF 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VAFVVICACYVRIYFAVqnpeltapNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYpVNS 476
Cdd:cd15061   168 LPLLLMLFVYLRIFRVI--------AKERKTAKTLAIVVGCFIVCWLPFFIMYLIEPFCDCQFSEALSTAFTWLGY-FNS 238
                         170
                  ....*....|....*...
gi 1907122621 477 CANPFLYAVFTKAFQRDF 494
Cdd:cd15061   239 VINPFIYAFYNKDFRRAF 256
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
320-494 1.06e-05

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 47.27  E-value: 1.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVS-------SYMKVSICLPMDVESTLSQVYIL-SI 391
Cdd:cd15001    93 ISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILASPVLFGQGlvryeseNGVTVYHCQKAWPSTLYSRLYVVyLA 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLNAVAFVVICACYVRiyfavqnpeltapnKDTKIAKKMAILIFTDFT-CMAPISFFAISAAFKVPLITVTNSKVLLVL 470
Cdd:cd15001   173 IVIFFIPLIVMTFAYAR--------------DTRKQVIKMLISVVVLFAvCWGPLLIDNLLVSFDVISTLHTQALKYMRI 238
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 471 FYPV----NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15001   239 AFHLlsyaNSCINPIIYAFMSKNFRSSF 266
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
319-484 1.42e-05

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 46.90  E-value: 1.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKV-SICLPmdVESTLSQVYILSILLLNAV 397
Cdd:cd14972    90 AIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALLPVLGWNCVLCDqESCSP--LGPGLPKSYLVLILVFFFI 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 398 AFVVICACYVRIYFAVQN------PELTA-----PNKDTKIAKKMAILIFTDFTCMAPIS--FFAISAAFKVPLI-TVTN 463
Cdd:cd14972   168 ALVIIVFLYVRIFWCLWRhanaiaARQEAavpaqPSTSRKLAKTVVIVLGVFLVCWLPLLilLVLDVLCPSVCDIqAVFY 247
                         170       180
                  ....*....|....*....|.
gi 1907122621 464 SKVLLVLFypvNSCANPFLYA 484
Cdd:cd14972   248 YFLVLALL---NSAINPIIYA 265
7tmA_Histamine_H3R_H4R cd15048
histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G ...
319-494 1.62e-05

histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H4R, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320176 [Multi-domain]  Cd Length: 296  Bit Score: 46.91  E-value: 1.62e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSI-----ClpmDVESTLSQVYILSILL 393
Cdd:cd15048    93 LISLDRYLSVTKAVKYRAKQTKRRTVLLMALVWILAFLLYGPAIIGWDLWTGYSIvptgdC---EVEFFDHFYFTFITSV 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LN-AVAFVVICACYVRIY------------------FAVQNPELTAPN-------KDTKIAKKMAILIFTDFTCMAPISF 447
Cdd:cd15048   170 LEfFIPFISVSFFNLLIYlnirkrsrrrplrsvpilPASQNPSRARSQreqvklrRDRKAAKSLAILVLVFLICWAPYTI 249
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1907122621 448 FAIsaAFKVPLITVTNSKVLLVLFYPV--NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15048   250 LTI--IRSFCSGSCVDSYLYEFTFWLLwtNSAINPFLYAACHPRFRKAF 296
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
315-494 1.88e-05

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 46.51  E-value: 1.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 315 ITRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMAT-----LPLVGVSSYMKVSICLPMDVESTLSQVYIL 389
Cdd:cd15095    89 LTLTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIpvaiyYRLEEGYWYGPQTYCREVWPSKAFQKAYMI 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 390 SILLLNAV-AFVVICACYVRIYFAVQNPELTAPNKDT-----------KIAKKMA--ILIFTdfTCMAPIS----FFAIS 451
Cdd:cd15095   169 YTVLLTYViPLAIIAVCYGLILRRLWRRSVDGNNQSEqlseralrqkrKVTRMVIvvVVLFA--ICWLPNHvlnlWQRFD 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1907122621 452 AAFKVPLITVTNSKVLLVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15095   247 PNFPETYATYALKIAALCLSY-ANSAVNPFVYAFMGENFRKYF 288
7tmA_tmt_opsin cd15086
teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G ...
320-494 2.36e-05

teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G protein-coupled receptors; Teleost multiple tissue (tmt) opsins are homologs of encephalopsin. Mouse encephalopsin (or panopsin) is highly expressed in the brain and testes, whereas the teleost homologs are localized to multiple tissues. The exact functions of the encephalopsins and tmt-opsins are unknown. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Tmt opsins belong to the class A of the G protein-coupled receptors and show strong homology to the vertebrate visual opsins.


Pssm-ID: 320214 [Multi-domain]  Cd Length: 276  Bit Score: 46.27  E-value: 2.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKlRLRHAIPIMLGGWIFSTLMATLPLVGVSSY----MKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15086    94 LSYERYCTLLRPTEADVS-DYRKAWLGVGGSWLYSLLWTLPPLLGWSSYgpegPGTTCSVQWTSRSANSISYIICLFIFC 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 -AVAFVVICACYVRIYFAVQN----PELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVP-LITVTNSKVLLV 469
Cdd:cd15086   173 lLLPFLVMVYCYGRLLYAIKQvgkiNKSTARKREQHVLLMVVTMVICYLLCWLPYGVMALLATFGKPgLVTPVASIVPSI 252
                         170       180
                  ....*....|....*....|....*
gi 1907122621 470 LFYPVNSCaNPFLYAVFTKAFQRDF 494
Cdd:cd15086   253 LAKSSTVV-NPIIYVFMNKQFYRCF 276
7tmA_SSTR1 cd15970
somatostatin receptor type 1, member of the class A family of seven-transmembrane G ...
320-494 2.95e-05

somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR1 is coupled to a Na/H exchanger, voltage-dependent calcium channels, and AMPA/kainate glutamate channels. SSTR1 is expressed in the normal human pituitary and in nearly half of all pituitary adenoma subtypes.


Pssm-ID: 320636 [Multi-domain]  Cd Length: 276  Bit Score: 46.06  E-value: 2.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMaTLPLVGVSSYMKVS-------ICLPMDVESTLSQVYILSIL 392
Cdd:cd15970    93 LSIDRYIAVVHPIKAARYRRPTVAKMVNLGVWVFSILV-ILPIIIFSNTAPNSdgsvacnMQMPEPSQRWLAVFVVYTFL 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLNAVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKK----MAILIFTDFT-CMAPISFFAISAAFkVPLITVTNSKVL 467
Cdd:cd15970   172 MGFLLPVIAICLCYILIIVKMRVVALKAGWQQRKRSERkitlMVMMVVTVFViCWMPFYVVQLVSVF-VGQHDATVSQLS 250
                         170       180
                  ....*....|....*....|....*..
gi 1907122621 468 LVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15970   251 VILGY-ANSCANPILYGFLSDNFKRSF 276
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
343-492 3.59e-05

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 45.91  E-value: 3.59e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 343 AIPIMLGGWIFStLMATLPLVGVSSYMK----VSIC---LPMDVESTLSQVYilSILLLNAVAFVVICACYVRI--YFA- 412
Cdd:cd15088   117 AKLVNVGLWAAS-FLSILPVWVYSSLIYfpdgTTFCyvsLPSPDDLYWFTIY--HFILGFAVPLVVITVCYILIlhRLAr 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 413 -VQNPELTAPNKDTKIAKKMAILIFTDFT-CMAPISFFA-ISAAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFTKA 489
Cdd:cd15088   194 gVAPGNQSHGSSRTKRVTKMVILIVVVFIvCWLPFHVVQlVNLAMNRPTLAFEVAYFLSICLGYANSCLNPFVYILVSEN 273

                  ...
gi 1907122621 490 FQR 492
Cdd:cd15088   274 FRK 276
7tmA_V2R cd15388
vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled ...
320-487 3.69e-05

vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The vasopressin type 2 receptor (V2R) is a G(s)-coupled receptor that controls balance of water and sodium ion by regulating their reabsorption in the renal collecting duct. Mutations of V2R is responsible for nephrogenic diabetes insipidus. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320510 [Multi-domain]  Cd Length: 295  Bit Score: 45.92  E-value: 3.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGgWIFStLMATLPLVGVSSYMKVSI----CLPMDVESTLSQVYILSILLLN 395
Cdd:cd15388    94 MTFDRHQAICRPMVTFQKGRARWNGPVCVA-WAIS-LILSLPQVFIFSKVEVAPgvyeCWACFIEPWGLKAYVTWITLVV 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVA-FVVICACYVRIYFAVQN-----------------PELTAPNKDTKIAK------KMAILIFTDFT-CMAPisFFAI 450
Cdd:cd15388   172 FVLpTLIITVCQVLIFKEIHIniylksqiivavvkkkqLLSSRASSVAEVSKamiktvKMTLVIVLVYVlCWAP--FFLV 249
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1907122621 451 S--AAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFT 487
Cdd:cd15388   250 QlwSVWDPKAPTEGATFTILMLLASLNSCTNPWIYMAFS 288
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
320-490 4.65e-05

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 45.43  E-value: 4.65e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTItyaVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVS---ICLPMDVESTLSQVYILSILL-LN 395
Cdd:cd15213    94 ISVDRYLII---VQRQDKLNPHRAKILIAVSWVLSFCVSFPPLVGWGKYEFPPrapQCVLGYTESPADRIYVVLLLVaVF 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAVQNPEltapnkdTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPL-ITVTNSKVLLVLFYpV 474
Cdd:cd15213   171 FIPFLIMLYSYFCILNTVRSFK-------TRAFTTILILFIGFSVCWLPYTVYSLLSVFSRYSsSFYVISTCLLWLSY-L 242
                         170
                  ....*....|....*.
gi 1907122621 475 NSCANPFLYAVFTKAF 490
Cdd:cd15213   243 KSAFNPVIYCWRIKKF 258
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
320-494 5.02e-05

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 45.30  E-value: 5.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPmDVESTLSQVYILSILLLNAVA- 398
Cdd:cd15321   100 ISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLPPLIYKGKQKDEQGGLP-QCKLNEEAWYILSSSIGSFFAp 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 399 FVVICACYVRIYfavqnpeLTAPNKDTKIAKKMAILIFTDFTCMAPIsFFAISAAFKVPLITVTNSKVLLVLFYP--VNS 476
Cdd:cd15321   179 CLIMILVYLRIY-------LIAKNREKRFTFVLAVVIGVFVLCWFPF-FFSYSLGAICPELCKVPHSLFQFFFWIgyCNS 250
                         170
                  ....*....|....*...
gi 1907122621 477 CANPFLYAVFTKAFQRDF 494
Cdd:cd15321   251 SLNPVIYTIFNQDFRRAF 268
7tmA_alpha2A_AR cd15322
alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
320-494 7.64e-05

alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320445 [Multi-domain]  Cd Length: 259  Bit Score: 44.55  E-value: 7.64e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGV---SSYMKVSICLPMDvestlSQVYILSILLLNA 396
Cdd:cd15322    94 ISLDRYWSITQAIEYNLKRTPRRIKCIIFIVWVISAVISFPPLITIekkSGQPEGPICKIND-----EKWYIISSCIGSF 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VA-FVVICACYVRIYfavqnpeLTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYpVN 475
Cdd:cd15322   169 FApCLIMVLVYIRIY-------QIAKNREKRFTFVLAVVIGVFVICWFPFFFTYTLTAVCDCSVPETLFKFFFWFGY-CN 240
                         170
                  ....*....|....*....
gi 1907122621 476 SCANPFLYAVFTKAFQRDF 494
Cdd:cd15322   241 SSLNPVIYTIFNHDFRRAF 259
7tmA_SSTR2 cd15971
somatostatin receptor type 2, member of the class A family of seven-transmembrane G ...
320-494 9.62e-05

somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin, a polypeptide hormone that regulates a wide variety of physiological such as neurotransmission, endocrine secretion, cell proliferation, and smooth muscle contractility. SSTRs are composed of five distinct subtypes (SSTR1-5) which are encoded by separate genes on different chromosomes. SSTR2 plays critical roles in growth hormone secretion, glucagon secretion, and immune responses. SSTR2 is expressed in the normal human pituitary and in nearly all pituitary growth hormone adenomas.


Pssm-ID: 320637 [Multi-domain]  Cd Length: 279  Bit Score: 44.45  E-value: 9.62e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFStLMATLPLV---GVSSYMKVSICL---PMDVESTLSQVYILSILL 393
Cdd:cd15971    93 MSIDRYLAVVHPIKSAKWRKPRTAKMINMAVWGVS-LLVILPIMiyaGVQTKHGRSSCTiiwPGESSAWYTGFIIYTFIL 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LNAVAFVVICACYVRIYFAVQNPELTA-----PNKDTKIAKKMAILIFTDFTCMAPISFF---AISAAFKVPLITVTNSK 465
Cdd:cd15971   172 GFFVPLTIICLCYLFIIIKVKSSGIRVgsskrKKSEKKVTRMVSIVVAVFVFCWLPFYIFnvsSVSVSISPTPGLKGMFD 251
                         170       180
                  ....*....|....*....|....*....
gi 1907122621 466 VLLVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15971   252 FVVVLSY-ANSCANPILYAFLSDNFKKSF 279
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
320-494 1.51e-04

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 43.48  E-value: 1.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLNAVAF 399
Cdd:cd15059    94 ISLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISLPPLFGWKDEQPWHGAEPQCELSDDPGYVLFSSIGSFYIPL 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 400 VVICACYVRIYFAvqnpeltAPNKDTKIAKKMAILIFTDFTCMAPisFFaisaaFKVPLITVTN----SKVLLVLFYPV- 474
Cdd:cd15059   174 LIMIIVYARIYRA-------AKRKERRFTLVLGVVMGAFVLCWLP--FF-----FTYPLVVVCKtcgvPELLFKFFFWLg 239
                         170       180
                  ....*....|....*....|..
gi 1907122621 475 --NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15059   240 ycNSALNPVIYTIFNKDFRRAF 261
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
320-494 1.68e-04

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 43.59  E-value: 1.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFStLMATLPLVGVSSYMKV-----SIC---LPMDVESTLSQVYILSI 391
Cdd:cd15162    94 ISIDRYLAIVHPMGHRRLRARRYALGTCLAIWLLA-LLVTLPLYLVKQTIFLpaldiTTChdvLPEQLLVGDWFYYFLSL 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 -LLLNAVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKKMAILIFTDF-TCMAPISFFAIsAAFKVPLITVTNS----K 465
Cdd:cd15162   173 aIVGFLIPFILTASCYVATIRTLAALEDENSEKKKKRAIKLAATVLAIFiICFAPSNLLLL-AHYSLISSSGTGHlyfaY 251
                         170       180
                  ....*....|....*....|....*....
gi 1907122621 466 VLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15162   252 LLALCLSTLNSCIDPFIYYFVSKEFRDHV 280
7tmA_UII-R cd14999
urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled ...
356-488 1.91e-04

urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The urotensin-II receptor (UII-R, also known as the hypocretin receptor) is a member of the class A rhodopsin-like G-protein coupled receptors, which binds the peptide hormone urotensin-II. Urotensin II (UII) is a vasoactive somatostatin-like or cortistatin-like peptide hormone. However, despite the apparent structural similarity to these peptide hormones, they are not homologous to UII. Urotensin II was first identified in fish spinal cord, but later found in humans and other mammals. In fish, UII is secreted at the back part of the spinal cord, in a neurosecretory centre called uroneurapophysa, and is involved in the regulation of the renal and cardiovascular systems. In mammals, urotensin II is the most potent mammalian vasoconstrictor identified to date and causes contraction of arterial blood vessels, including the thoracic aorta. The urotensin II receptor is a rhodopsin-like G-protein coupled receptor, which binds urotensin-II. The receptor was previously known as GPR14, or sensory epithelial neuropeptide-like receptor (SENR). The UII receptor is expressed in the CNS (cerebellum and spinal cord), skeletal muscle, pancreas, heart, endothelium and vascular smooth muscle. It is involved in the pathophysiological control of cardiovascular function and may also influence CNS and endocrine functions. Binding of urotensin II to the receptor leads to activation of phospholipase C, through coupling to G(q/11) family proteins. The resulting increase in intracellular calcium may cause the contraction of vascular smooth muscle.


Pssm-ID: 320130 [Multi-domain]  Cd Length: 282  Bit Score: 43.58  E-value: 1.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 356 LMATLPLVGVSSYMKVSICLPMDVESTlSQVYILSILLLNAVA-FVVICACYVRI---YFAVQNPeLTAPNKDTKIAKKM 431
Cdd:cd14999   134 IMIRLVTVEDKSGGSKRICLPTWSEES-YKVYLTLLFSTSIVIpGLVIGYLYIRLarkYWLSQAA-ASNSSRKRLPKQKV 211
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907122621 432 AILIFTD----FTCMAPISFFAI----SAAFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFTK 488
Cdd:cd14999   212 LKMIFTIvlvfWACFLPFWIWQLlylySPSLSLSPRTTTYVNYLLTCLTYSNSCINPFLYTLLTK 276
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
315-484 2.06e-04

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 43.33  E-value: 2.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 315 ITRRFITLERWHTITYAVQLdQKLRLRHAIPIMLGGWIFSTLMATLPL-VGVSSYMK---VSIClPMD--VESTLSQVYI 388
Cdd:cd15079    88 WTNAAIAYDRYNVIVKPLNG-NPLTRGKALLLILFIWLYALPWALLPLlFGWGRYVPegfLTSC-SFDylTRDWNTRSFV 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 389 LSILLLN-AVAFVVICACYVRIYFAV--------------------QNPELTAPNKDTKIAKKMAILIFTDFTCMAPISF 447
Cdd:cd15079   166 ATIFVFAyVIPLIIIIYCYSFIVKAVfahekalreqakkmnvvslrSNADANKQSAEIRIAKVALTNVFLWFIAWTPYAV 245
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1907122621 448 FAISAAFKVP-LITVTNSkVLLVLFYPVNSCANPFLYA 484
Cdd:cd15079   246 VALIGAFGNQsLLTPLVS-MIPALFAKTAACYNPIVYA 282
7tmA_LWS_opsin cd15081
long wave-sensitive opsins, member of the class A family of seven-transmembrane G ...
320-491 2.27e-04

long wave-sensitive opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Long Wave-Sensitive opsin is also called red-sensitive opsin or red cone photoreceptor pigment, which mediates visual transduction in response to light at long wavelengths. Vertebrate cone opsins are expressed in cone photoreceptor cells of the retina and involved in mediating photopic vision, which allows color perception. The cone opsins can be classified into four classes according to their peak absorption wavelengths: SWS1 (ultraviolet sensitive), SWS2 (short wave-sensitive), MWS/LWS (medium/long wave-sensitive), and RH2 (medium wave-sensitive, rhodopsin-like opsins). Members of this group belong to the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320209 [Multi-domain]  Cd Length: 292  Bit Score: 43.36  E-value: 2.27e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYA---VQLDQKLrlrhAIPIMLGGWIFSTLMATLPLVGVSSY----MKVSiCLPmDVESTLS----QVYI 388
Cdd:cd15081   106 ISWERWVVVCKPfgnIKFDGKL----AIVGIIFSWVWSAVWCAPPIFGWSRYwphgLKTS-CGP-DVFSGSSdpgvQSYM 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 389 LSILLLNA-VAFVVICACYVRIYFAV-----QNPELTAPNKDTKIAKKMAI-LIFTDFTCMAPISFFAISAAFKVPLITV 461
Cdd:cd15081   180 IVLMITCCiIPLAIIILCYLQVWLAIravaqQQKESESTQKAEKEVSRMVVvMIFAYCFCWGPYTFFACFAAANPGYAFH 259
                         170       180       190
                  ....*....|....*....|....*....|
gi 1907122621 462 TNSKVLLVLFYPVNSCANPFLYAVFTKAFQ 491
Cdd:cd15081   260 PLAAALPAYFAKSATIYNPIIYVFMNRQFR 289
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
319-494 2.28e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 43.31  E-value: 2.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVG---VSSYMKVSICLPmdvESTLSQVYILSILLLn 395
Cdd:cd15055    93 LIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDnlnQPGLIRYNSCYG---ECVVVVNFIWGVVDL- 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFV----VICACYVRIYFAV-----------------QNPELTAPNKDTKIAKKMAILIFTDFTCMAPisFFAISAAF 454
Cdd:cd15055   169 VLTFIlpctVMIVLYMRIFVVArsqarairshtaqvsleGSSKKVSKKSERKAAKTLGIVVGVFLLCWLP--YYIVSLVD 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1907122621 455 KVPLITVTNSKVLLVLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15055   247 PYISTPSSVFDVLIWLGY-FNSCLNPLIYALFYPWFRKAL 285
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
320-494 2.37e-04

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 43.19  E-value: 2.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVG----VSSYMKVSICLPMD-----VESTLSQVYIls 390
Cdd:cd15060    94 IALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGwndwPENFTETTPCTLTEekgyvIYSSSGSFFI-- 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 391 illlnavAFVVICACYVRIYFAVqnpeltapNKDTKIAKKMAILIFTDFTCMAPisFFAISAAfkVPLITVTNSKVLLVL 470
Cdd:cd15060   172 -------PLLIMTIVYVKIFIAT--------SKERRAARTLGIIMGVFVVCWLP--FFLMYVI--LPFCETCSPSAKVVN 232
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 471 FYP----VNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15060   233 FITwlgyVNSALNPVIYTIFNLDFRRAF 260
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
320-494 2.48e-04

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 43.38  E-value: 2.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVqlDQKLRLRHAIPIMLGGWIFS-TLMATLPLV-GVSSYM-----KVSICLPMDVESTLSQVYILSIL 392
Cdd:cd15207    94 IAVDRYRAVVHPT--EPKLTNRQAFVIIVAIWVLAlAIMIPQALVlEVKEYQffrgqTVHICVEFWPSDEYRKAYTTSLF 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLNAVA-FVVICACYVRIYFAV------QNPELTAPNKDTKIAK-----KMAILIFTDFT-CMAPISFFAISAAFKVplI 459
Cdd:cd15207   172 VLCYVApLLIIAVLYVRIGYRLwfkpvpGGGSASREAQAAVSKKkvrviKMLIVVVVLFAlSWLPLHTVTMLDDFGN--L 249
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1907122621 460 TVTNSKVLLVLFYPV-------NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15207   250 SPNQREVLYVYIYPIahwlayfNSCVNPIVYGYFNRNFRKGF 291
7tmA_LPAR2_Edg4 cd15342
lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial ...
320-414 2.74e-04

lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial differentiation gene 4 (Edg4), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320464 [Multi-domain]  Cd Length: 274  Bit Score: 42.86  E-value: 2.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTItYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMdvESTLSQVYILSILLLNAVAF 399
Cdd:cd15342    93 IAVERHQTI-FTMQLHSKMSNQRVVILIFGIWMVALILGLIPAMGWNCLCDLKRCSTM--APLYSRSYLVFWALSNLLTF 169
                          90
                  ....*....|....*
gi 1907122621 400 VVICACYVRIYFAVQ 414
Cdd:cd15342   170 LIMVAVYTRIFIYVR 184
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
320-494 2.93e-04

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 42.73  E-value: 2.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLM---------ATLPlvgvsSYMKVSICLPMDvestlSQVY-IL 389
Cdd:cd15067    94 ISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALIsfpaiawwrAVDP-----GPSPPNQCLFTD-----DSGYlIF 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 390 SILLLNAVAFVVICACYVRIYFAVQnpeltapnKDTKIAKKMAILIFTDFTCMAPISFFAISAAFkVPLITVTNSKVLLV 469
Cdd:cd15067   164 SSCVSFYIPLVVMLFTYYRIYRAAA--------KEQKAAKTLGIVMGVFILCWLPFFVTNILIGF-CPSNCVSNPDILFP 234
                         170       180
                  ....*....|....*....|....*....
gi 1907122621 470 LF----YpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15067   235 LVtwlgY-INSGMNPIIYACSSRDFRRAF 262
7tmA_SSTR4 cd15973
somatostatin receptor type 4, member of the class A family of seven-transmembrane G ...
320-494 2.98e-04

somatostatin receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR4 plays a critical role in mediating inflammation. Unlike other SSTRs, SSTR4 subtype is not detected in all pituitary adenomas while it is expressed in the normal human pituitary.


Pssm-ID: 320639 [Multi-domain]  Cd Length: 274  Bit Score: 42.92  E-value: 2.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFStLMATLPLVGVSSYM----KVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15973    93 LSVDRYIAVVHPLRAARYRRPTVAKMINICVWILS-LLVISPIIIFADTAtrkgQAVACNLIWPHPAWSAAFVIYTFLLG 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 -AVAFVVICACYVRIYFAVQNPELTA----PNKDTKIAKKMAILIFTDFT-CMAPISFFAISAAFkVPLITVTNSKVLLV 469
Cdd:cd15973   172 fLLPVLAIGLCYILIIGKMRAVALKAgwqqRRKSEKKITRMVLMVVTVFViCWMPFYVVQLLNLF-LPRLDATVNHASLI 250
                         170       180
                  ....*....|....*....|....*
gi 1907122621 470 LFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15973   251 LSY-ANSCANPILYGFLSDNFRRSF 274
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
320-494 3.17e-04

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 42.87  E-value: 3.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSS------YMKVSICLPMDVESTLSQVYIL-SIL 392
Cdd:cd15063    94 ISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVICFPPLVGWNDgkdgimDYSGSSSLPCTCELTNGRGYVIySAL 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLNAVAFVVICACYVRIYfavqnpelTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFY 472
Cdd:cd15063   174 GSFYIPMLVMLFFYFRIY--------RAARMETKAAKTVAIIVGCFIFCWLPFFTVYLVRAFCEDCIPPLLFSVFFWLGY 245
                         170       180
                  ....*....|....*....|..
gi 1907122621 473 pVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15063   246 -CNSALNPCIYALFSRDFRFAF 266
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
320-485 3.62e-04

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 42.71  E-value: 3.62e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSY----MKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd15083    94 IAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLPPLFGWSRYvlegLLTSCSFDYLSRDDANRSYVICLLIFG 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 -AVAFVVICACYVRIYFAVQNPELTA------------------PNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKv 456
Cdd:cd15083   174 fVLPLLIIIYCYSFIFRAVRRHEKAMkemakrfskselsspkarRQAEVKTAKIALLLVLLFCLAWTPYAVVALIGQFG- 252
                         170       180       190
                  ....*....|....*....|....*....|
gi 1907122621 457 PLITVTNSKVLL-VLFYPVNSCANPFLYAV 485
Cdd:cd15083   253 YLEVLTPLATAIpAAFAKTSAIYNPVIYAF 282
7tmA_Histamine_H4R cd15295
histamine receptor subtype H4R, member of the class A family of seven-transmembrane G ...
320-494 3.72e-04

histamine receptor subtype H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtype H4R, a member of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320422 [Multi-domain]  Cd Length: 267  Bit Score: 42.50  E-value: 3.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQL-DQKLRLRHAIPIMLGGWIFStLMATLPLVGVSSYMKV--SICLPmdveSTLSQVYILSILLLNA 396
Cdd:cd15295    94 ISYDRYQSVSNAVSYrNQQTATLRIVTQMVAVWVLA-FLVHGPAILVSDSWKTedGECEP----EFFSNWYILAITSVLE 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VAFVVICACY--VRIYFAvqnpeLTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYpV 474
Cdd:cd15295   169 FLVPVILVAYfnTQIYWS-----LWKRLRDRKLAKSLAIILGTFAICWAPYSLFTIIRAACEKHRGSPWYNFAFWLQW-F 242
                         170       180
                  ....*....|....*....|
gi 1907122621 475 NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15295   243 NSFINPFLYPLCHKRFRKAF 262
7tmA_MCHR1 cd15338
melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane ...
351-494 4.02e-04

melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320460 [Multi-domain]  Cd Length: 282  Bit Score: 42.49  E-value: 4.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 351 WIFSTLMatlPLVGVSsyMKVSICLPmDVESTLSQVYILSILLLNAVAFVVICACYVRIYFAVQNPELTAPNKD----TK 426
Cdd:cd15338   139 WMYAGLM---PLPDGS--VGCALLLP-NPETDTYWFTLYQFFLAFALPLVVICVVYFKILQNMASTVAPLPQRSlrvrTK 212
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 427 IAKKMAILI-FTDFTCMAPISFFAISA-AFKVPLITVTNSKVLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15338   213 KVTRMAVAIcLAFFICWAPFYILQLAHlSIDRPSLAFLYAYNVAISMGYANSCINPFLYIMLSETFKRQF 282
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
320-494 5.07e-04

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 41.92  E-value: 5.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVG---VSSYMKVsiclPMDVEST--LSQVYILSILLL 394
Cdd:cd15049    94 ISFDRYFSVTRPLTYRAKRTPKRAILMIALAWVISFVLWAPAILGwqyFVGERTV----PDGQCYIqfLDDPAITFGTAI 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NA--VAFVVICACYVRIYFAVqnpeltapNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFY 472
Cdd:cd15049   170 AAfyLPVLVMTILYWRIYRET--------ARERKAARTLSAILLAFIITWTPYNILVLVSTFCAKCIPDTLWSFGYWLCY 241
                         170       180
                  ....*....|....*....|..
gi 1907122621 473 pVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15049   242 -INSTINPFCYALCNKTFRKTF 262
7tmA_P2Y8 cd15368
purinergic receptor P2Y8, member of the class A family of seven-transmembrane G ...
320-494 5.94e-04

purinergic receptor P2Y8, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320490 [Multi-domain]  Cd Length: 281  Bit Score: 42.06  E-value: 5.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFsTLMATLPLVGVS-----SYMKVSICLPMDVESTLSQV-----YIL 389
Cdd:cd15368    94 ISIERYLGVVYPMRSMRWRKKRYAVAACIGMWLL-VLTALSPLERTDltyyvKELNITTCFDVLKWTMLPNIaawaaFLF 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 390 SI-LLLNAVAFVVICACYVRIYFA-VQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFF-------------AISAAF 454
Cdd:cd15368   173 TLfILLFLIPFIITVYCYVLIILKlVQTSERYGREQKRRAIYLALIVLLVFITCFAPNNFIllahmvsrlfygkSLYHAY 252
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1907122621 455 KVPLITVTnskvllvlfypVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15368   253 KLTLSLSC-----------LNSCLDPFIYYFASKEFRKKL 281
7tmA_LPAR cd15101
lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane ...
320-494 6.19e-04

lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341325 [Multi-domain]  Cd Length: 274  Bit Score: 41.73  E-value: 6.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERwHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSICLPMdvESTLSQVYILSILLLNAVAF 399
Cdd:cd15101    93 IAVER-HISVMRMQLHSRLSNRRVVVLIVLVWTMAIVMGAIPSVGWNCLCAIDACSNM--APLYSRSYLVFWAISNLVTF 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 400 VVICACYVRIYFAVQNPELTAP--------NKDT--KIAKKMAILIFTDFTCMAP---ISFFAISAAFKVPLITVTNSKV 466
Cdd:cd15101   170 LVMVVVYARIFVYVRRRTNRMSphtsgsirNRDTmmSLLKTVVIVLGAFVVCWTPglvVLLLDGLCCRQCNVLAVEKFFL 249
                         170       180
                  ....*....|....*....|....*...
gi 1907122621 467 LLVLFypvNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15101   250 LLAEF---NSAVNPIIYSYRDKEMSGTF 274
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
320-494 9.09e-04

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 41.51  E-value: 9.09e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFStLMATLPLVGVSSYMK--------VSICLpMDVESTLSQVYILS- 390
Cdd:cd14997    95 ISFERYYAICHPLQAKYVCTKRRALVIIALIWLLA-LLTSSPVLFITEFKEedfndgtpVAVCR-TPADTFWKVAYILSt 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 391 ILLLNAVAFVVICACYVRI-YFAVQNPELTAPNKDTKIAKKM----------AILIFTDFTCMAPISFFAISAAFKVP-- 457
Cdd:cd14997   173 IVVFFVVPLAILSGLYSVIcRRLVGHPALESRRADAANRHTLrsrrqvvymlITVVVLFFVCLLPFRVVTLWIIFAPDed 252
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1907122621 458 -----LITVTNSKVLL-VLFYpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14997   253 lqalgLEGYLNLLVFCrVMVY-LNSALNPILYNLMSTKFRSAF 294
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
298-494 9.53e-04

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 41.24  E-value: 9.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 298 PFLKTFPNNVKAqlekrITRRFITLERWHTITYAvqLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSY--------M 369
Cdd:cd15393    77 PFVQVLSVNVSV-----FTLTVIAVDRYRAVIHP--LKARCSKKSAKIIILIIWILALLVALPVALALRVEeltdktnnG 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 370 KVSICLPMDVESTLSQVYILSILLLN-AVAFVVICACYVRIyfAVQNPELTAP-----------NKDTKIAKKMAILIFT 437
Cdd:cd15393   150 VKPFCLPVGPSDDWWKIYNLYLVCVQyFVPLVIICYAYTRI--AVKIWGTKAPgnaqdvrddeiLKNKKKVIKMLIIVVA 227
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907122621 438 DFT-CMAPISFFAIsAAFKVPLITvTNSKVLLVLFYP-----VNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15393   228 LFAlCWLPLQTYNL-LNEIKPEIN-KYKYINIIWFCShwlamSNSCYNPFIYGLYNEKFKREF 288
7tmA_C3aR cd15115
complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of ...
399-491 9.54e-04

complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320243 [Multi-domain]  Cd Length: 265  Bit Score: 41.29  E-value: 9.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 399 FVVICACYVRIYFAVQNPELTAPNKdtKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKV--LLVLFYPVNS 476
Cdd:cd15115   170 LLIIAACYSFIAFRMQRGRFAKSQS--KTFRVIIAVVVAFFVCWAPYHIIGILSLYGDPPLSKVLMSWdhLSIALAYANS 247
                          90
                  ....*....|....*
gi 1907122621 477 CANPFLYAVFTKAFQ 491
Cdd:cd15115   248 CLNPVLYVFMGKDFK 262
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
316-485 9.83e-04

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 41.15  E-value: 9.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 316 TRRFITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYmkvsicLPMDVESTLSQVYI---LSIL 392
Cdd:cd15337    91 TLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGWGRY------VPEGFQTSCTFDYLsrdLNNR 164
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLNAVAFV--------VICACYVRIYFAVQNPEL------------------TAPNKDTKIAKKMAILIFTDFTCMAP-- 444
Cdd:cd15337   165 LFILGLFIfgflcpllIIIFCYVNIIRAVRNHEKemtqtaksgmgkdtekndARKKAEIRIAKVAIILISLFLLSWTPya 244
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1907122621 445 -ISFFAI--SAAFKVPLITvtnskVLLVLFYPVNSCANPFLYAV 485
Cdd:cd15337   245 vVALLGQfgPAYWITPYVS-----ELPVMFAKASAIYNPIIYAL 283
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
320-494 1.02e-03

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 41.05  E-value: 1.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKV--SIClpmdvESTLSQVYIL-SILLLNA 396
Cdd:cd15327    94 ISVDRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISIGPLLGWKEPPPPdeSIC-----SITEEPGYALfSSLFSFY 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 397 VAFVVICACYVRIYFAVQNPeltapNKDTKIAKKMAILIFTDFTCMAPIsFFAISAAFKVPLITVTNS--KVLLVLFYpV 474
Cdd:cd15327   169 LPLMVILVMYFRVYVVALKF-----SREKKAAKTLAIVVGVFILCWFPF-FFVLPLGSFFPALKPSEMvfKVIFWLGY-F 241
                         170       180
                  ....*....|....*....|
gi 1907122621 475 NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15327   242 NSCVNPIIYPCSSKEFKRAF 261
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
321-494 1.16e-03

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 41.16  E-value: 1.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 321 TLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMA------------TLPLVGVSSYMKVSICLPMDVESTLSQVYI 388
Cdd:cd15134    96 SVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVCAlpfaiqtrivylEYPPTSGEALEESAFCAMLNEIPPITPVFQ 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 389 LSILLLNAVAFVVICACYVRIYFAVQNPELTAPNKDTKIAKK-------------MAILIfTDFTCMAPisFFAISaafk 455
Cdd:cd15134   176 LSTFLFFIIPMIAIIVLYVLIGLQLRRSTLLRRGQRSVSGGRrssqsrrtvlrmlVAVVV-AFFICWAP--FHAQR---- 248
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1907122621 456 vpLITVTNSK-------VLLVLFYP------VNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15134   249 --LLTVYAKNmtppylfINRILFYIsgvlyyVSSTVNPILYNVMSAKYRQAF 298
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
320-494 1.17e-03

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 41.13  E-value: 1.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQlDQKLRLRHAIPIMLGG-WIFsTLMATLPLV---GVSSYM----KVSICLPMDVESTLSQVYILSI 391
Cdd:cd15096    94 MSLDRYLAVVHPIT-SMSIRTERNTLIAIVGiWIV-ILVANIPVLflhGVVSYGfsseAYSYCTFLTEVGTAAQTFFTSF 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLN-AVAFVVICACYVRIYFAVQ------NPELTAPNKDTKIAKKMAILIFTDFT-CMAPISFFAISAAFKVPLITVTn 463
Cdd:cd15096   172 FLFSyLIPLTLICVLYMLMLRRLRrqkspgGRRSAESQRGKRRVTRLVVVVVVVFAiCWLPIHIILLLKYYGVLPETVL- 250
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907122621 464 SKVLLVLFYPV---NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15096   251 YVVIQILSNCLaygNSCVNPILYAFLSQNFRKAF 284
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
320-494 1.32e-03

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 40.60  E-value: 1.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSymkvsicLPMDVESTLSQVY--------ILSI 391
Cdd:cd15215    93 VSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQSTPPLYGWGQ-------AAFDERNALCSVIwgssysytILSV 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLNAVAFVVICACYVRIYFAVQNpeltapNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLF 471
Cdd:cd15215   166 VSSFVLPVIIMLACYSMVFRAARR------CYHCKAAKVIFIIIFSYVLSMGPYSFLSVLAVWVDTQVPQWVISIILWLF 239
                         170       180
                  ....*....|....*....|...
gi 1907122621 472 YpVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15215   240 F-LQCCIHPYIYGYMHKSIKKEF 261
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
320-494 1.37e-03

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 40.82  E-value: 1.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLmATLPL-----VGVSSYMKVSICLPMDVESTLSQVYILSILLL 394
Cdd:cd14985    94 MSVDRYLAIVHPVASRRLRRRRQARVTCALIWVVACL-LSLPTfllrsLQAIENLNKTACIMLYPHEAWHFGLSLELNIL 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 N-AVAFVVICACYVRIYFAVQNPELTAPN---KDTKIAKKMAILIFTDFTCMAPISFFAISAAFK--------VPLITVT 462
Cdd:cd14985   173 GfVLPLLIILTCYFHIARSLRKRYERTGKngrKRRKSLKIIFALVVAFLVCWLPFHFFKFLDFLAqlgairpcFWELFLD 252
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907122621 463 NSKVLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14985   253 LGLPIATCLAFTNSCLNPFIYVFVDRRFRQKV 284
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
320-494 1.48e-03

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 40.88  E-value: 1.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMA--------TLPLVGVSSYMKVSIC-LPMDVESTLSQVYILS 390
Cdd:cd14992    94 IAFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAipqlyyatTEVLFSVKNQEKIFCCqIPPVDNKTYEKVYFLL 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 391 ILLLNAVA-FVVICACYVRIYFAVQNPELTAPN---------KDTKIAKKMAILIFTDFT-CMAPI-SFFAISAAFKVPL 458
Cdd:cd14992   174 IFVVIFVLpLIVMTLAYARISRELWFRKVPGFSikeverkrlKCKRRVIKMLVCVVVLFViCWLPFhLFFLLRDFFPLIM 253
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1907122621 459 ITVTNSKVLLVLFYPV--NSCANPFLYAVFTKAFQRDF 494
Cdd:cd14992   254 KEKHTLQVYYFLHWIAmsNSMYNPIIYVTLNNNFRKNF 291
7tmA_Mel1A cd15402
melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
320-494 1.53e-03

melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320524 [Multi-domain]  Cd Length: 279  Bit Score: 40.66  E-value: 1.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFsTLMATLPLVGVSSYMKVSICLPMDVESTLSQVYILSILLLN-AVA 398
Cdd:cd15402    94 IAINRYCYICHSLKYDKLYSDKNSLCYVLLIWVL-TVAAIVPNLFVGSLQYDPRIYSCTFAQSVSSAYTIAVVFFHfILP 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 399 FVVICACYVRIYFAV-QNPELTAPNKDTKIAKK------MAILIFTDFT-CMAPISFFAISAAFKVPLITVTNSKVLLVL 470
Cdd:cd15402   173 IIIVTFCYLRIWILViQVRRRVKPDNKPKLKPHdfrnfvTMFVVFVLFAvCWAPLNFIGLAVAVDPETIVPRIPEWLFVA 252
                         170       180
                  ....*....|....*....|....*..
gi 1907122621 471 FYPV---NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15402   253 SYYMayfNSCLNAIIYGLLNQNFRREY 279
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
320-494 1.55e-03

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 40.86  E-value: 1.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATlP------LVGVSSYMKVSICLPMDVESTLSQVYILSILL 393
Cdd:cd15098    96 MSVDRYIAVVHSRTSSSLRTRRNALLGVLVIWVLSLAMAS-PvavhqdLVHHWTASNQTFCWENWPEKQQKPVYVVCTFV 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LN-AVAFVVICACYVRIYFAVqNPELTAPNKDTKIAKK----MAILIFTDFT-CMAPISFFAISAAF-KVPLitvTNSKV 466
Cdd:cd15098   175 FGyLLPLLLITFCYAKVLNHL-HKKLKNMSKKSERSKKktaqTVLVVVVVFGiSWLPHHIIHLWVEFgDFPL---TQASF 250
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1907122621 467 LLVLF-----YPvNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15098   251 VLRITahclaYA-NSCVNPIIYAFLSENFRKAY 282
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
319-494 1.66e-03

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 40.30  E-value: 1.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQlDQKLRLRHAIPIMLGGWIFSTLMATlPLVGVSSYMKVSI----CLPMDVESTLSQVYILSILLL 394
Cdd:cd15196    93 ATAIDRYIAICHPLS-SHRWTSRRVHLMVAIAWVLSLLLSI-PQLFIFSYQEVGSgvydCWATFEPPWGLRAYITWFTVA 170
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 395 NAVA-FVVICACYVRIYFAVQNpeltapnKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKVPLITVTNSKVLLVLFYP 473
Cdd:cd15196   171 VFVVpLIILAFCYGRICYVVWR-------AKIKTVKLTLVVVACYIVCWTPFFVVQMWAAWDPTAPIEGPAFVIIMLLAS 243
                         170       180
                  ....*....|....*....|.
gi 1907122621 474 VNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15196   244 LNSCTNPWIYLAFSGNLRRAL 264
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
320-494 2.00e-03

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 40.49  E-value: 2.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPL------VGVSSYMKVSICLPMDVESTLSQVY-ILSIL 392
Cdd:cd15057    94 ISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPVqlgwhrADDTSEALALYADPCQCDSSLNRTYaISSSL 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 393 LLNAVAFVVICACYVRIYFAVQN------------PELTAPN--------KDTKIAKKMAILI---------FTDFTCMA 443
Cdd:cd15057   174 ISFYIPVAIMIVTYTRIYRIARRqirriaaleraaQESTNPDsslrsslrRETKALKTLSIIMgvfvccwlpFFILNCVL 253
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1907122621 444 PISFFAISAAFKVPLITVTnskvLLVLFYPVNSCANPFLYAvFTKAFQRDF 494
Cdd:cd15057   254 PFCDLRTAQFPCVPDTTFI----VFVWLGWANSSLNPIIYA-FNADFRKAF 299
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
319-494 2.05e-03

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 40.28  E-value: 2.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFStLMATLP---LVGVSSYMKVSICLPMDVESTLSQVYILSILLLN 395
Cdd:cd14984    91 CISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALA-LLLSLPefiFSQVSEENGSSICSYDYPEDTATTWKTLLRLLQN 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFV----VICACYVRIYFAVqnpeLTAPNKDTKIAKKMAILIFTDF-TCMAPISFFAISAAFKVPLITVTN---SKVL 467
Cdd:cd14984   170 ILGFLlpllVMLFCYSRIIRTL----LRARNHKKHRALRVIFAVVVVFfLCWLPYNIVLLLDTLQLLGIISRScelSKSL 245
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907122621 468 ---------LVLFYpvnSCANPFLYAVFTKAFQRDF 494
Cdd:cd14984   246 dyalqvtesLAFSH---CCLNPVLYAFVGVKFRKYL 278
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
320-492 2.45e-03

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 40.11  E-value: 2.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITyAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYmkvsiclPMDVESTLSQV-----------YI 388
Cdd:cd15073    94 VAVDRYLTIC-RPDLGRKMTTNTYTVMILLAWTNAFFWAAMPLVGWASY-------ALDPTGATCTInwrkndssfvsYT 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 389 LSILLLN-AVAFVVICACYVRIYFAVQ-----------NPELTAPNKDTKIAKKMAILIFTDFTcmaPISFFAISAAFKV 456
Cdd:cd15073   166 MSVIVVNfIVPLAVMFYCYYNVSRFVKkvlasdclesvNIDWTDQNDVTKMSVIMIVMFLVAWS---PYSIVCLWASFGE 242
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1907122621 457 PLITVTNSKVLLVLFYPVNSCANPFLYAVFTKAFQR 492
Cdd:cd15073   243 PKKIPPWMAIIPPLFAKSSTFYNPCIYVIANKKFRR 278
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
55-278 3.59e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 39.92  E-value: 3.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621  55 LARLSLTYLPVKVIPSqAFRGLNEVVKIEISQSDsLERIeANAFDNLLNLSEILIQNtkNLLYIEPGAFTNLPRLKYLSI 134
Cdd:COG4886   161 LKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQ-ITDL-PEPLGNLTNLEELDLSG--NQLTDLPEPLANLTNLETLDL 235
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 135 CNTGIRTLPDVSKISSSEfnfILEICDNlYITTIPGNAfqGMNNESiTLKLYGNGFEEVQ-SHAFNGTTLISLELKENIY 213
Cdd:COG4886   236 SNNQLTDLPELGNLTNLE---ELDLSNN-QLTDLPPLA--NLTNLK-TLDLSNNQLTDLKlKELELLLGLNSLLLLLLLL 308
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907122621 214 LEKMHSGTFQGATGPSILDVSSTKLQALPSHGLESIQTLIATSSYSLKTLPSREKFTSLLVATLT 278
Cdd:COG4886   309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLG 373
7tmA_SSTR cd15093
somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
339-494 4.53e-03

somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. They share common signaling cascades such as inhibition of adenylyl cyclase, activation of phosphotyrosine phosphatase activity, and G-protein-dependent regulation of MAPKs.


Pssm-ID: 320221 [Multi-domain]  Cd Length: 280  Bit Score: 39.37  E-value: 4.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 339 RLRHAIPIMLGGWIFStLMATLPLV---GVSSYMKVSICLPM---DVESTLSQVYILSILLLNAVA-FVVICACYVRIYF 411
Cdd:cd15093   112 RPRVAKVVNLAVWVAS-LLVILPVVvfaGTRENQDGSSACNMqwpEPAAAWSAGFIIYTFVLGFLLpLLIICLCYLLIVI 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 412 AVQNPELTAPNKDTKIAKK----MAILIFTDFT-CMAPISFFAISAAFKVPLIT---VTNSKVLLVLFYpVNSCANPFLY 483
Cdd:cd15093   191 KVKSAGLRAGWQQRKRSERkvtrMVVMVVVVFViCWLPFYVLQLVNVFVQLPETpalVGVYHFVVILSY-ANSCANPILY 269
                         170
                  ....*....|.
gi 1907122621 484 AVFTKAFQRDF 494
Cdd:cd15093   270 GFLSDNFKKSF 280
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
320-494 5.14e-03

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 39.16  E-value: 5.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSYMKVSI--------CLPMDVESTLSQVY---I 388
Cdd:cd14968    92 IAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESgcgeggiqCLFEEVIPMDYMVYfnfF 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 389 LSILllnaVAFVVICACYVRIYFAV-----QNPELTAPN-------KDTKIAKKMAILIFTDFTCMAP------ISFFAi 450
Cdd:cd14968   172 ACVL----VPLLIMLVIYLRIFRVIrkqlrQIESLLRSRrsrstlqKEVKAAKSLAIILFLFALCWLPlhiincITLFC- 246
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1907122621 451 sAAFKVPLItVTNSKVLLVLFypvNSCANPFLYAVFTKAFQRDF 494
Cdd:cd14968   247 -PECKVPKI-LTYIAILLSHA---NSAVNPIVYAYRIRKFRQTF 285
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
320-494 6.35e-03

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 38.61  E-value: 6.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFsTLMATLP--LVGVSSY-MKVSICLpmdVESTLSQVYILSILLLN- 395
Cdd:cd15209    94 IAINRYCYICHSLQYDRLYSLRNTCCYLCLTWLL-TVLAVLPnfFIGSLQYdPRIYSCT---FAQTVSTVYTITVVVIHf 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 396 AVAFVVICACYVRIYFAV----------QNPELTAPNKDTKIAKKMAILIFTdfTCMAPISFFAISAAFKVPLITVTNSK 465
Cdd:cd15209   170 LLPLLIVSFCYLRIWVLVlqvrqrvkpdQRPKLKPADVRNFLTMFVVFVLFA--VCWAPLNFIGLAVAINPKEMAPKIPE 247
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1907122621 466 VLLVLFYPV---NSCANPFLYAVFTKAFQRDF 494
Cdd:cd15209   248 WLFVASYFMayfNSCLNAIIYGLLNQNFRKEY 279
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
320-494 7.12e-03

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 38.62  E-value: 7.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLV--GVSSYMKVSIC------LPMDVESTLSQVYILSI 391
Cdd:cd15333    98 IALDRYWAITDAVEYSKKRTPKRAAVMIALVWVISISISLPPFFwrQAKAEEEVSECvvntdhILYTVYSTVGAFYIPTL 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLnavafvvicACYVRIYFAvqnpeltAPNKDTKIAKKMAILIFTDFTCMAPisFFAIS--------AAFKVPLITvtn 463
Cdd:cd15333   178 LLI---------ALYGRIYVE-------ARARERKATKTLGIILGAFIVCWLP--FFIISlvlpickdACWFHLAIF--- 236
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1907122621 464 skVLLVLFYPVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15333   237 --DFFTWLGYLNSLINPIIYTMSNEDFKQAF 265
7tmA_SSTR5 cd15974
somatostatin receptor type 5, member of the class A family of seven-transmembrane G ...
320-494 7.74e-03

somatostatin receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR5 is coupled to inward rectifying K channels and phospholipase C, and plays critical roles in growth hormone and insulin secretion. SSTR5 acts as a negative regulator of PDX-1 (pancreatic and duodenal homeobox-1) expression, which is a conserved homeodomain-containing beta cell-specific transcription factor essentially involved in pancreatic development, among many other functions.


Pssm-ID: 320640 [Multi-domain]  Cd Length: 277  Bit Score: 38.63  E-value: 7.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMaTLPLVGVSSYMK------VSICLPMDVESTlsqVYILSILL 393
Cdd:cd15974    93 MSIDRYLAVVHPIKSTKWRRPRVAKLINATVWTLSFLV-VLPVIIFSDVQPdlntcnISWPEPVSVWST---AFIIYTAV 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LNAVA-FVVICACYVRIYFAVQNPEL----TAPNKDTKIAKKMAILIFTDFT-CMAPISFFAI-SAAFKVPLITVTNSKV 466
Cdd:cd15974   169 LGFFGpLLVICLCYLLIVIKVKSSGLrvgsTKRRKSERKVTRMVVIIVVVFVfCWLPFYMLNIvNLIVILPEEPAFVGVY 248
                         170       180
                  ....*....|....*....|....*....
gi 1907122621 467 LLVLFYP-VNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15974   249 FFVVVLSyANSCANPILYGFLSDNFKQSF 277
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
319-489 8.35e-03

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 38.38  E-value: 8.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIpIMLGG-WIFSTLMATLPLVGVSSYMKV---SIC-LPMDVESTLSQVY--ILSI 391
Cdd:cd14981    96 AMAVERFLAITHPFFYNSHVKKRRAR-LMLGAvWAFALLIASLPLLGLGSYVLQypgTWCfLDFYSKNTGDAAYayLYSI 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 392 LLLNAVAFVVICACYVRIYF-----------AVQNPELTAPNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKvPLIT 460
Cdd:cd14981   175 LGLLILLVTLLCNLLVIITLlrmrrrkkrhrRSRRSARRQKRNEIQMVVLLLAITVVFSVCWLPLMIRVLINATG-DSEK 253
                         170       180
                  ....*....|....*....|....*....
gi 1907122621 461 VTNSKVLLVLFYPVNSCANPFLYAVFTKA 489
Cdd:cd14981   254 NGKTDLLAVRMASWNQILDPWVYILLRKE 282
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
320-494 8.36e-03

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 38.24  E-value: 8.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 320 ITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTLMATLPLVGVSSymkvsiclPMDVESTLSQV-----YIL-SILL 393
Cdd:cd15062    94 ISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISIGPLLGWKE--------PAPADEQACGVneepgYVLfSSLG 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LNAVAFVVICACYVRIYFAVqnpelTAPNKDTKIAKKMAILIFTDFTCMAPISF-FAISAAFKVPLITVTNSKVLLVLFY 472
Cdd:cd15062   166 SFYLPLAIILVMYCRVYVVA-----FKFSREKKAAKTLGIVVGAFVLCWFPFFVvLPLGSLFSTLKPPEPVFKVVFWLGY 240
                         170       180
                  ....*....|....*....|..
gi 1907122621 473 pVNSCANPFLYAVFTKAFQRDF 494
Cdd:cd15062   241 -FNSCLNPIIYPCSSREFKRAF 261
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
319-492 8.49e-03

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 38.45  E-value: 8.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 319 FITLERWHTITYAVQLDQKLRLRHAIPIMLGGWIFSTL--MATLPLVGVSSYMKVSICLPMDVESTLSQVYILSI---LL 393
Cdd:cd15168    93 CISVHRYLGICHPLRSLGKLKKRHAVAISVAVWILVLLqlLPILFFATTGRKNNRTTCYDTTSPEELNDYVIYSMvltGL 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907122621 394 LNAVAFVVICACYVRIYFAV--QNPELTAPNKDTKIAKkMAILIFTDFT-CMAPisfFAI--SAAFKVPLITVTNSKVLL 468
Cdd:cd15168   173 GFLLPLLIILACYGLIVRALirKLGEGVTSALRRKSIR-LVIIVLALFAvCFLP---FHVtrTINLAARLLSGTASCATL 248
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1907122621 469 VLFY----------PVNSCANPFLYAVFTKAFQR 492
Cdd:cd15168   249 NGIYvaykvtrplaSLNSCLNPLLYFLAGDKFRR 282
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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