|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
458-1241 |
8.54e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.65 E-value: 8.54e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 458 LVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ---QDLQSKFVAKENEVQSLHS 534
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQkelYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 535 KLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK 614
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 615 QLKQTEDSLASEQDHLASKEQELKDvqnvnfllkaEVQKLQALAKEQAAAAHEVEKmqKSVHVKDDKIRLLEEQLQREVA 694
Cdd:TIGR02168 390 QLELQIASLNNEIERLEARLERLED----------RRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 695 SRVEELKILNDQNKALQLEVQKLQAVVSE-QPNKDVVEQMKKCIQEKDEKLRTVEELLETG---------LIQV------ 758
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQlQARLDSLERLQENLEGFSEGVKALLKNQSGLsgilgvlseLISVdegyea 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 759 ---ATREEELNAIRTENSSLTKE-VQELKAKQMDQVAYVLVPFVsliedlkkviheKDGQIKSVEELLevellkVANKEK 834
Cdd:TIGR02168 538 aieAALGGRLQAVVVENLNAAKKaIAFLKQNELGRVTFLPLDSI------------KGTEIQGNDREI------LKNIEG 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 835 TVQALKQEIEILKEEIGNAQLEKAHQLSVTS--QVQELQNLLRGKEEQVDsmkaaledLTGREKCTQVCSTPRFEELENV 912
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSYLLGGVLVVDDldNALELAKKLRPGYRIVT--------LDGDLVRPGGVITGGSAKTNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 913 LKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKE-ITDLCNE 991
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEqLEERIAQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 992 LESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDL--LKRLFpavsvpshSNYS 1069
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELtlLNEEA--------ANLR 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1070 EWLRSFEKKAKACMAGPSDT-EAVKVLEHRLKEANEMHTLLQLECEKYKSVLAEtegiLQKLQRSVEQEESKWKVKAEES 1148
Cdd:TIGR02168 824 ERLESLERRIAATERRLEDLeEQIEELSEDIESLAAEIEELEELIEELESELEA----LLNERASLEEALALLRSELEEL 899
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1149 RRTIQQMQSSFTASEQELERLRH------------ENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQK 1216
Cdd:TIGR02168 900 SEELRELESKRSELRRELEELREklaqlelrleglEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
|
810 820 830
....*....|....*....|....*....|..
gi 1958681414 1217 KLD-------DSYSEAVRQNEELNLLKTQLNE 1241
Cdd:TIGR02168 980 KIKelgpvnlAAIEEYEELKERYDFLTAQKED 1011
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
398-1187 |
1.04e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.72 E-value: 1.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 398 YQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNklrqdcgrLVSELNEKTGKLQQEGVQKK 477
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA--------LANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 478 NAEQAAAQLKVQLQEAERRWEEVQsyirKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE 557
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELA----EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 558 QKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAE--ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ 635
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 636 ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkddKIRLLEEQLQREVASRVEELkILNDQNKALQLEV- 714
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV-----KALLKNQSGLSGILGVLSEL-ISVDEGYEAAIEAa 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 715 --QKLQAVVSEqpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAY 792
Cdd:TIGR02168 543 lgGRLQAVVVE--NLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 793 VLVPFV------SLIEDLKKVIHE-----KDGQIKSVEELLEVELLKVANKektVQALKQEIEILKEEIgNAQLEKAHQL 861
Cdd:TIGR02168 621 LLGGVLvvddldNALELAKKLRPGyrivtLDGDLVRPGGVITGGSAKTNSS---ILERRREIEELEEKI-EELEEKIAEL 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 862 SVtsQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDN---EIKRIEAILKDTKSDLSKKA 938
Cdd:TIGR02168 697 EK--ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQlskELTELEAEIEELEERLEEAE 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 939 ELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLR-------- 1010
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALRE--ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEeqieelse 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1011 --EKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLlkrlfpavsvpshSNYSEWLRSFEKKAKAcmagpsd 1088
Cdd:TIGR02168 853 diESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL-------------EELSEELRELESKRSE------- 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1089 teavkvLEHRLKEANEMHTLLQLECEKYKSVLAE-----------TEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQS 1157
Cdd:TIGR02168 913 ------LRRELEELREKLAQLELRLEGLEVRIDNlqerlseeyslTLEEAEALENKIEDDEEEARRRLKRLENKIKELGP 986
|
810 820 830
....*....|....*....|....*....|....
gi 1958681414 1158 SFTASEQEL----ERLRHENKAMENLRREREHLE 1187
Cdd:TIGR02168 987 VNLAAIEEYeelkERYDFLTAQKEDLTEAKETLE 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
446-1058 |
1.56e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 446 AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 525
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 526 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 606 HKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN----VNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDK 681
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEalaeLEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 682 IRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAV--VSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVA 759
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVkaALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 760 TREEELNAIRTENSSLTK-----------EVQELKAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLK 828
Cdd:COG1196 552 VVEDDEVAAAAIEYLKAAkagratflpldKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 829 VANKEKTVQALKQEIEILKEEIgnAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprfEE 908
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEG--EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE----------AL 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 909 LENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDL 988
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681414 989 --CN-----ELESLKNAVEHQRKKNNDLReknweamEALASTEKILqDRVNKTSKER-QQQVEAVELESKDLLKRLFP 1058
Cdd:COG1196 780 gpVNllaieEYEELEERYDFLSEQREDLE-------EARETLEEAI-EEIDRETRERfLETFDAVNENFQELFPRLFG 849
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
686-1274 |
2.42e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 2.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 686 EEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNK-DVVEQMKKCIQEKDEKLRTVEELLETGLIQVATR--- 761
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEiSRLEQQKQILRERLANLERQLEELEAQLEELESKlde 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 762 -EEELNAIRTENSSLTKEVQELKAKqmdqvayvLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK 840
Cdd:TIGR02168 335 lAEELAELEEKLEELKEELESLEAE--------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 841 QEIEILKEEIGNAQLEKAHQLS--VTSQVQELQnllrgkeEQVDSMKAALEDLTGrekctqvcstpRFEELENVLKEKDN 918
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKklEEAELKELQ-------AELEELEEELEELQE-----------ELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 919 EIKRIEAILKDTKSDLSK---KAELLKEVQDEN-KLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITD------- 987
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQlqaRLDSLERLQENLeGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAalggrlq 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 988 --LCNELESLKNAVEHQrkKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVeAVELESKD---------LLKRL 1056
Cdd:TIGR02168 549 avVVENLNAAKKAIAFL--KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGV-AKDLVKFDpklrkalsyLLGGV 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1057 FPAVSVPSHSNYSEWLRSFEK---------KAKACMAGPSDTEAVKVLEHR--LKEANEMHTLLQLECEKYKSVLAEteg 1125
Cdd:TIGR02168 626 LVVDDLDNALELAKKLRPGYRivtldgdlvRPGGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAE--- 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1126 iLQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHEnkaMENLRREREHLEIELEKAEVERSTYVMEVR 1205
Cdd:TIGR02168 703 -LRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEER---IAQLSKELTELEAEIEELEERLEEAEEELA 778
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681414 1206 ELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKI 1274
Cdd:TIGR02168 779 EAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI 847
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
604-1215 |
4.02e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 64.31 E-value: 4.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 604 ELHKVIAEKDKQLKQTED---SLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDD 680
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENieeLIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 681 KIRLLEEQLqREVASRVEELKilndqnkalqLEVQKLQAVVSEQPNkdvveqmkkcIQEKDEKLRTVEELLETGLIQVAT 760
Cdd:PRK03918 253 SKRKLEEKI-RELEERIEELK----------KEIEELEEKVKELKE----------LKEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 761 REEELNAIRTENSSLTKEVQELKAKQMDqvayvlvpfVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK 840
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEER---------LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLT 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 841 -QEIEILKEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEE-LENVLKEKDN 918
Cdd:PRK03918 383 gLTPEKLEKELEELEKAK---EEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEhRKELLEEYTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 919 EIKRIEAILKDTKSDLSK----KAELLKEVQDENKLFK--SQVEQLNHQNHQQASFpSQEELQTVISEKEKeITDLCNEL 992
Cdd:PRK03918 460 ELKRIEKELKEIEEKERKlrkeLRELEKVLKKESELIKlkELAEQLKELEEKLKKY-NLEELEKKAEEYEK-LKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 993 ESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELEskdlLKRLFPAvsvpshsnYSEWL 1072
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEER----LKELEPF--------YNEYL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1073 RsfekkakacmagpsdteaVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRti 1152
Cdd:PRK03918 606 E------------------LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELR-- 665
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958681414 1153 qqmqSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQ 1215
Cdd:PRK03918 666 ----EEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVE 724
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
308-964 |
2.63e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 2.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 308 LKEKSGVIKEALKKSNKgELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER---SSVVMARMKERIGTLE 384
Cdd:TIGR02168 300 LEQQKQILRERLANLER-QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 385 KEHNIFQNKMHVSYQETQQMQMKfeqvREQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDCGRLVSELNE 464
Cdd:TIGR02168 379 EQLETLRSKVAQLELQIASLNNE----IERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 465 KTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskq 544
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL---- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 545 qleQRLMQLMESEQK-RASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQLKQTEDS 622
Cdd:TIGR02168 523 ---GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEG 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 623 LASEQDHLASKEQELKDVqnVNFLL-----------KAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQR 691
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKA--LSYLLggvlvvddldnALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRR 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 692 EVASRVEELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTE 771
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 772 NSSLTKEVQELKAKqmdqvayvlvpfvslIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIG 851
Cdd:TIGR02168 756 LTELEAEIEELEER---------------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 852 NAQLEKAHQL----SVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREkctqvcstprfEELENVLKEKDNEIKRIEAIL 927
Cdd:TIGR02168 821 NLRERLESLErriaATERRLEDLEEQIEELSEDIESLAAEIEELEELI-----------EELESELEALLNERASLEEAL 889
|
650 660 670
....*....|....*....|....*....|....*..
gi 1958681414 928 KDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQ 964
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
573-1328 |
5.03e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 5.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK--QLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAE 650
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaeDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 651 VQKlQALAKEQAAAAHEVEKMQKSVHV-KDDKIRLLEEQLQREVASRVEELKILNDQNKALqlEVQKLQAVVSEQPNKDV 729
Cdd:PTZ00121 1162 DAR-KAEEARKAEDAKKAEAARKAEEVrKAEELRKAEDARKAEAARKAEEERKAEEARKAE--DAKKAEAVKKAEEAKKD 1238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 730 VEQMKKCiqekdEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlVPFVSLIEDLKKVIH 809
Cdd:PTZ00121 1239 AEEAKKA-----EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKK-AEEKKKADEAKKKAE 1312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 810 EK------DGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQV-- 881
Cdd:PTZ00121 1313 EAkkadeaKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkk 1392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 882 --DSMKAALEDltgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQDENK----LFKSQV 955
Cdd:PTZ00121 1393 adEAKKKAEED---KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK--KAEEAKKADEAKKKAEEAKkaeeAKKKAE 1467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 956 EQLNHQNHQQASFPSQ--EELQTVISEKEKEITDLCNELESLKNAVE----HQRKKNNDLR--EKNWEAMEALASTEKIL 1027
Cdd:PTZ00121 1468 EAKKADEAKKKAEEAKkaDEAKKKAEEAKKKADEAKKAAEAKKKADEakkaEEAKKADEAKkaEEAKKADEAKKAEEKKK 1547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1028 QDRVNKT-------------SKERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKACMAGPSDTEAVKV 1094
Cdd:PTZ00121 1548 ADELKKAeelkkaeekkkaeEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1095 LEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKwKVKAEESRRTIQQMQSSftasEQELERLRHENK 1174
Cdd:PTZ00121 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED-KKKAEEAKKAEEDEKKA----AEALKKEAEEAK 1702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1175 AMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDdsysEAVRQNEELNLLKTQLNETHSKLQNEQTERK 1254
Cdd:PTZ00121 1703 KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE----EAKKDEEEKKKIAHLKKEEEKKAEEIRKEKE 1778
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958681414 1255 KVADDLHKAQQSLNFIHSKISLKAAGDT--VVIENNDISPEMGSPEKEtMSVSLTQTVAHLQQLLQEVNQQLTKEK 1328
Cdd:PTZ00121 1779 AVIEEELDEEDEKRRMEVDKKIKDIFDNfaNIIEGGKEGNLVINDSKE-MEDSAIKEVADSKNMQLEEADAFEKHK 1853
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-146 |
1.44e-08 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 54.74 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 29 MKETLYDDVLAKQKREQKLISTKADKKKAEKKKNKKK------EIQNGTLHESD----SEHVPQDFKLSDASPVEDEqfV 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAAL--E 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1958681414 99 PAPLSVAETSSSVRERKKKEKKQKPSLEEHIIKESDASKIPGKKVEPV 146
Cdd:pfam05104 79 PEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEA 126
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
608-1219 |
5.21e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.64 E-value: 5.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 608 VIAEKDKQLKqtedSLASEQDhLASKEQELKDVQNvnfLLKAEVQ--KLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLL 685
Cdd:COG1196 194 ILGELERQLE----PLERQAE-KAERYRELKEELK---ELEAELLllKLRELEAELEELEAELEELEAELEELEAELAEL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 686 EEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEqpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEEL 765
Cdd:COG1196 266 EAELEELRLELEELELELEEAQAEEYELLAELARLEQD---IARLEERRRELEERLEELEEELAELEEELEELEEELEEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 766 NAIRTEnssLTKEVQELKAKQMDQVAyvlvpfvsLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEI 845
Cdd:COG1196 343 EEELEE---AEEELEEAEAELAEAEE--------ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 846 LKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREkctqvcstprfEELENVLKEKDNEIKRIEA 925
Cdd:COG1196 412 LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL-----------LELLAELLEEAALLEAALA 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 926 ILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1005
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1006 N--NDLREKNWEAMEALAStEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKACM 1083
Cdd:COG1196 561 AaiEYLKAAKAGRATFLPL-DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1084 AGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASE 1163
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681414 1164 QELERLRHENKAMENLRREREHLEIE--LEKAEVERSTYVMEVRELKDLLTELQKKLD 1219
Cdd:COG1196 720 ELEEEALEEQLEAEREELLEELLEEEelLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
582-1029 |
5.26e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 57.75 E-value: 5.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 582 KAQIQQFHSQIAAQT-SASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKE 660
Cdd:TIGR00606 690 EAELQEFISDLQSKLrLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 661 QAAAAHEVEKMQKSVHVKDDKIRLLEeQLQREvasrveelkiLNDQNKALQLEVQKLQAVVSEQpnkdVVEQMKKCIQEK 740
Cdd:TIGR00606 770 QETLLGTIMPEEESAKVCLTDVTIME-RFQME----------LKDVERKIAQQAAKLQGSDLDR----TVQQVNQEKQEK 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 741 DEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQEL--KAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQI--- 815
Cdd:TIGR00606 835 QHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIgtNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDspl 914
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 816 -KSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQlekAHQLSVTSQVQE-LQNLLRGKEEQVDSMKAALEDLTG 893
Cdd:TIGR00606 915 eTFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIH---GYMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEK 991
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 894 REKctqvcstpRFEELENVLKEKDNEIKRIEAILKDTKSdLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE 973
Cdd:TIGR00606 992 HQE--------KINEDMRLMRQDIDTQKIQERWLQDNLT-LRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEEN 1062
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958681414 974 LQTVISEKEKEITDLCNELESLKNAVEHQRKKN-NDLREKNWEAMEALASTEKILQD 1029
Cdd:TIGR00606 1063 IDLIKRNHVLALGRQKGYEKEIKHFKKELREPQfRDAEEKYREMMIVMRTTELVNKD 1119
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
442-1040 |
1.00e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.57 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 442 SKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTaEHEAAQQDLQSK 521
Cdd:TIGR04523 148 KKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNK-SLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 522 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA--QTSAS 599
Cdd:TIGR04523 227 NNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnNQKEQ 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 600 VLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDvqnvnflLKAEVQKLQAlakeqaaaahEVEKMQKSVHVKD 679
Cdd:TIGR04523 307 DWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQ-------LKKELTNSES----------ENSEKQRELEEKQ 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 680 DKIrlleEQLQREVASRVEELKILNDQNKALQLEVQklqavvseqpnkdvveQMKKCIQEKDEKLRTVEElletgliqva 759
Cdd:TIGR04523 370 NEI----EKLKKENQSYKQEIKNLESQINDLESKIQ----------------NQEKLNQQKDEQIKKLQQ---------- 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 760 treeelnairtENSSLTKEVQELKAKQMDQvayvlvpfVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQAL 839
Cdd:TIGR04523 420 -----------EKELLEKEIERLKETIIKN--------NSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 840 KQEIEILKEEIGNAQLEkahQLSVTSQVQELQNLLRGKEEQVDSMKAaledltgrekctqvcstpRFEELENVLKEKDNE 919
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKE---LKKLNEEKKELEEKVKDLTKKISSLKE------------------KIEKLESEKKEKESK 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 920 IKRIEAILKDTKSDLsKKAELLKEVQDENKlfksQVEQLNHQnhQQASFPSQEELQTVISEKEKEITDLCNELESLKNAV 999
Cdd:TIGR04523 540 ISDLEDELNKDDFEL-KKENLEKEIDEKNK----EIEELKQT--QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKI 612
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 1958681414 1000 EHQRKKNNDLREKNweamEALASTEKILQDRVNKTSKERQQ 1040
Cdd:TIGR04523 613 SSLEKELEKAKKEN----EKLSSIIKNIKSKKNKLKQEVKQ 649
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
317-1037 |
1.22e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 317 EALKKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHV 396
Cdd:PTZ00121 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQA 1270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 397 SYQETQQMQM----KFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQE 472
Cdd:PTZ00121 1271 AIKAEEARKAdelkKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA 1350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 473 GVQK-----KNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLE 547
Cdd:PTZ00121 1351 EAEAaadeaEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 548 QRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQL----------K 617
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAdeakkaaeakK 1510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 618 QTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKL--QALAKEQAAAAHEVEKMQKSVHVKDDKIRLLE--EQLQREV 693
Cdd:PTZ00121 1511 KADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKadELKKAEELKKAEEKKKAEEAKKAEEDKNMALRkaEEAKKAE 1590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 694 ASRVEELKILNDQNKALQLEV--------QKLQAVVSEQPNKDVVEQMKKCIQE---KDEKLRTVEELLETGLIQVATRE 762
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEakkaeeakIKAEELKKAEEEKKKVEQLKKKEAEekkKAEELKKAEEENKIKAAEEAKKA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 763 EElNAIRTENSSLTKEVQELKAKQMDQVAyvlvPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE 842
Cdd:PTZ00121 1671 EE-DKKKAEEAKKAEEDEKKAAEALKKEA----EEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 843 IEILKEEIGN----AQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprFEELENVLkEKDN 918
Cdd:PTZ00121 1746 AEEAKKDEEEkkkiAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDI---------FDNFANII-EGGK 1815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 919 EIKRIEAILKDTKSDLSKKAELLKEVQ-DENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKN 997
Cdd:PTZ00121 1816 EGNLVINDSKEMEDSAIKEVADSKNMQlEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDK 1895
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 1958681414 998 AVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKE 1037
Cdd:PTZ00121 1896 DDIEREIPNNNMAGKNNDIIDDKLDKDEYIKRDAEETREE 1935
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
326-891 |
1.39e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.10 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 326 ELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSsvvmARMKERIGTLEKEHnifqnkmhvsyQETQQMQ 405
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR----RELEERLEELEEEL-----------AELEEEL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 406 MKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQdcgrlvselnektgkLQQEGVQKKNAEQAAAQ 485
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE---------------LEELAEELLEALRAAAE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 486 LKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEE 565
Cdd:COG1196 398 LAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 566 SMQIQVQDILEQNEALKAQIQQFHSQIA--AQTSASVLAEELHKVIAEKDKQLKQ-TEDSLASEQDHLASKEQELKDVQN 642
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEAdyEGFLEGVKAALLLAGLRGLAGAVAVlIGVEAAYEAALEAALAAALQNIVV 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 643 VNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVS 722
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA-----RYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 723 EQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvayvlvpfvsliE 802
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELEL------------E 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 803 DLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQnllrgkEEQVD 882
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL------ERELE 770
|
....*....
gi 1958681414 883 SMKAALEDL 891
Cdd:COG1196 771 RLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
698-1055 |
2.23e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 698 EELKILNDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTK 777
Cdd:TIGR02169 674 AELQRLRERLEGLKRELSSLQSELRRIENR--LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 778 EVQELKAKqMDQVAYVLVPFVSLIEDLKKVI-----HEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEilKEEIGN 852
Cdd:TIGR02169 752 EIENVKSE-LKELEARIEELEEDLHKLEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN--RLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 853 AQLEKAhqlsvtsqVQELQNLLRGKEEQVDSMKAALEDLTGRekctqvcstprFEELENVLKEKDNEIKRIEAILKDTKS 932
Cdd:TIGR02169 829 EYLEKE--------IQELQEQRIDLKEQIKSIEKEIENLNGK-----------KEELEEELEELEAALRDLESRLGDLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 933 DLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQasfpsQEELQTViSEKEKEITDLCNELESLKNAVEHQRKKNNDLREK 1012
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELEAQIEKKRKRLSEL-----KAKLEAL-EEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV 963
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1958681414 1013 NwEAMEALASTE-KILQD--RVNKTSKERQQQVEAVELESKDLLKR 1055
Cdd:TIGR02169 964 E-EEIRALEPVNmLAIQEyeEVLKRLDELKEKRAKLEEERKAILER 1008
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
905-1241 |
3.24e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.06 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 905 RFEELENVLKEKDNEIKRIEAILKDTKSDL------SKKAELLKEVQDENK---------LFKSQVEQLNHQNHQQASFP 969
Cdd:TIGR02168 173 RRKETERKLERTRENLDRLEDILNELERQLkslerqAEKAERYKELKAELRelelallvlRLEELREELEELQEELKEAE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 970 SQ-EELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLreknweamealasteKILQDRVNKTSKERQQQVEAVELE 1048
Cdd:TIGR02168 253 EElEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL---------------ANEISRLEQQKQILRERLANLERQ 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1049 SKDLLKRLfpavsvpshsnySEWLRSFEKKAkacmagpsdtEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQ 1128
Cdd:TIGR02168 318 LEELEAQL------------EELESKLDELA----------EELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1129 KLQRSVEQEESKW---KVKAEESRRTIQQMQSSFTASEQELERLRHENKA---------MENLRREREHLEIELEKAEVE 1196
Cdd:TIGR02168 376 ELEEQLETLRSKVaqlELQIASLNNEIERLEARLERLEDRRERLQQEIEEllkkleeaeLKELQAELEELEEELEELQEE 455
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1958681414 1197 RSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNE 1241
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
480-1013 |
1.61e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.76 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 480 EQAAAQLKVQLQEAERRWEEVQSYIrKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmeseQK 559
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFI-KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL----EE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 560 RASQEESMQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLASKEqELKD 639
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERI----------EELKKEIEELEEKVKELKELKEKAEEYIKLSE-FYEE 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 640 VQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkdDKIRLLEEQLQREVAsRVEELKILNDQNKALQLEVQKLQA 719
Cdd:PRK03918 305 YLDELREIEKRLSRLEEEINGIEERIKELEEKEERL----EELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 720 VVSEQPNKDVVEQMKKCIQEKDEKLRTVEELletgliqvatrEEELNAIRTENSSLTKEVQELKAKQM-----------D 788
Cdd:PRK03918 380 RLTGLTPEKLEKELEELEKAKEEIEEEISKI-----------TARIGELKKEIKELKKAIEELKKAKGkcpvcgrelteE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 789 QVAYVLVPFVSLIEDLKKVIHEKDgQIKSVEELLEVELLKVANKEKTVQALKQ---EIEILKEEIGNAQLEKAHQlsVTS 865
Cdd:PRK03918 449 HRKELLEEYTAELKRIEKELKEIE-EKERKLRKELRELEKVLKKESELIKLKElaeQLKELEEKLKKYNLEELEK--KAE 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 866 QVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQ 945
Cdd:PRK03918 526 EYEKLKEKLIKLKGEIKSLKKELEKLEELKK--------KLAELEKKLDELEEELAELLKELE--ELGFESVEELEERLK 595
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681414 946 DENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKN 1013
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEE 663
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
458-1218 |
1.64e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 458 LVSELNEKTGKLQQEgvqKKNAEQAAAqLKVQLQEAErrweevQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLT 537
Cdd:TIGR02169 192 IIDEKRQQLERLRRE---REKAERYQA-LLKEKREYE------GYELLKEKEALERQKEAIERQLASLEEELEKLTEEIS 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 538 DTLVSKQQLEQRLMQLmESEQKRASQEESMQIQvqdilEQNEALKAQIQQFHSQIAA-QTSASVLAEELHKVIAEKDKQL 616
Cdd:TIGR02169 262 ELEKRLEEIEQLLEEL-NKKIKDLGEEEQLRVK-----EKIGELEAEIASLERSIAEkERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 617 KQTEDSlaseqdhlaskEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASR 696
Cdd:TIGR02169 336 AEIEEL-----------EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 697 VEELKILNDQNKALQLEV----QKLQAVVSEQPN-KDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTE 771
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELadlnAAIAGIEAKINElEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 772 NSSLTKEVQELKAKQMDQVAYVL--VPFVSLIEDLKKVIHEKDGQ-IKSVEELLEVELLKVANKEKTV-----QALKQEI 843
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRggRAVEEVLKASIQGVHGTVAQlGSVGERYATAIEVAAGNRLNNVvveddAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 844 EILKEE-IGNAQ---LEKAHQLSVTSQ-------VQELQNLLRGKEEQVDSMKAALEDL-------TGREKCTQVcstpR 905
Cdd:TIGR02169 565 ELLKRRkAGRATflpLNKMRDERRDLSilsedgvIGFAVDLVEFDPKYEPAFKYVFGDTlvvedieAARRLMGKY----R 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 906 FEELENVLKEKDNEI----KRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQnhQQASFpsqeELQTVISEK 981
Cdd:TIGR02169 641 MVTLEGELFEKSGAMtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI--ENRLD----ELSQELSDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 982 EKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDrVNKTSKERQQQVEAVELESKDLLKRLfpavs 1061
Cdd:TIGR02169 715 SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-LEARIEELEEDLHKLEEALNDLEARL----- 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1062 vpshsnysewlrsfekkakacmagpsdteavkvLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESK- 1140
Cdd:TIGR02169 789 ---------------------------------SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEi 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1141 ---------WKVKAEESRRTIQQMQSSFTASEQELERLRHENKAME----NLRREREHLEIELEKAEVERSTYVMEVREL 1207
Cdd:TIGR02169 836 qelqeqridLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLEsrlgDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
810
....*....|.
gi 1958681414 1208 KDLLTELQKKL 1218
Cdd:TIGR02169 916 RKRLSELKAKL 926
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
391-1184 |
2.92e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.04 E-value: 2.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 391 QNKMHVSYQetqQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSA----------ELNKLRQDCGRLVS 460
Cdd:pfam15921 255 QNKIELLLQ---QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQarnqnsmymrQLSDLESTVSQLRS 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 461 ELNE------------------KTGKLQQEGVQKKNAEQAAAQLKVQLQ---------EAERRWEEVQS-YIRKRTAEHE 512
Cdd:pfam15921 332 ELREakrmyedkieelekqlvlANSELTEARTERDQFSQESGNLDDQLQklladlhkrEKELSLEKEQNkRLWDRDTGNS 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 513 AAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQdilEQNEALKAQIQQFHSQI 592
Cdd:pfam15921 412 ITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLE---STKEMLRKVVEELTAKK 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 593 AAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN-----VNFLLKAEVQKLQALAKEQAAA--A 665
Cdd:pfam15921 489 MTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNegdhlRNVQTECEALKLQMAEKDKVIEilR 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 666 HEVEKMQKSV--HVKDDKIRLLEE-QLQREVASR---VEELKILNDQNKAlqlEVQKLQAVVSeqpnkDVVEQMKKCIQE 739
Cdd:pfam15921 569 QQIENMTQLVgqHGRTAGAMQVEKaQLEKEINDRrleLQEFKILKDKKDA---KIRELEARVS-----DLELEKVKLVNA 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 740 KDEKLRTVEELLETG---LIQVATREEELNAIRTENSSLTKEVQElKAKQMD----QVAYVLVPFVSLIEDLKKVIHEKD 812
Cdd:pfam15921 641 GSERLRAVKDIKQERdqlLNEVKTSRNELNSLSEDYEVLKRNFRN-KSEEMEtttnKLKMQLKSAQSELEQTRNTLKSME 719
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 813 GQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEK------AHQLSVT-SQVQELQNLLRGKEEQVDSMK 885
Cdd:pfam15921 720 GSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKhflkeeKNKLSQElSTVATEKNKMAGELEVLRSQE 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 886 AALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEaiLKDTKSdlskkaelLKEVQ----DENKLFKSQVEQLNHQ 961
Cdd:pfam15921 800 RRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLK--LQHTLD--------VKELQgpgyTSNSSMKPRLLQPASF 869
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 962 NHQQASFPSQEELQTVISEKEKEITDLCNE-LESLKNAVEHQRKKNNDLREKNWEAMEALASTEKI--LQDRVNKTSKER 1038
Cdd:pfam15921 870 TRTHSNVPSSQSTASFLSHHSRKTNALKEDpTRDLKQLLQELRSVINEEPTVQLSKAEDKGRAPSLgaLDDRVRDCIIES 949
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1039 QQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAK----ACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECE 1114
Cdd:pfam15921 950 SLRSDICHSSSNSLQTEGSKSSETCSREPVLLHAGELEDPSScftfPSTASPSVKNSASRSFHSSPKKSPVHSLLTSSAE 1029
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1115 kyKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRRERE 1184
Cdd:pfam15921 1030 --GSIGSSSQYRSAKTIHSPDSVKDSQSLPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIRNQE 1097
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
457-768 |
3.07e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 3.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 457 RLVS---ELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQsyirkrtAEHEAAQQDLQSKfvakENEVQSLH 533
Cdd:TIGR02169 640 RMVTlegELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLK-------RELSSLQSELRRI----ENRLDELS 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 534 SKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTS---------ASVLAEE 604
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEdlhkleealNDLEARL 788
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 605 LHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQksvhvkdDKIRL 684
Cdd:TIGR02169 789 SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI-------ENLNG 861
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 685 LEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEE 764
Cdd:TIGR02169 862 KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERK--IEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
|
....
gi 1958681414 765 LNAI 768
Cdd:TIGR02169 940 KGED 943
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
601-1220 |
3.13e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 51.83 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 601 LAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ---ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQ---KS 674
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERlsiEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAEsdlSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 675 VHVKDDKIRLLEEQLQR-----EVASRVEELKILNDQNKALQLevqklqavvseqpnKDVVEQMKKCIQEKDEKLRTVEE 749
Cdd:PRK01156 268 ELEKNNYYKELEERHMKiindpVYKNRNYINDYFKYKNDIENK--------------KQILSNIDAEINKYHAIIKKLSV 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 750 LletgliqvATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlvpfvSLIEDLKKVIHEKDGQIKSVEELLEVELLKV 829
Cdd:PRK01156 334 L--------QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYL-----KSIESLKKKIEEYSKNIERMSAFISEILKIQ 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 830 ANKEKTVQALKQEIEILKEEIgnaqlekahqlsvTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEEL 909
Cdd:PRK01156 401 EIDPDAIKKELNEINVKLQDI-------------SSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKS 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 910 ENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQD-ENKLFKSQVEQLNHQNHQQASFPSQeelQTVISEKEKEITDL 988
Cdd:PRK01156 468 NHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKrKEYLESEEINKSINEYNKIESARAD---LEDIKIKINELKDK 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 989 CNELESLKNavEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHS-- 1066
Cdd:PRK01156 545 HDKYEEIKN--RYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSir 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1067 NYSEWLRSFEKKAKACMAGPSDTEAV-KVLEHRLKEANEMHTLLQLECEkYKSVLAETEGILQKLQRSVEQ---EESKWK 1142
Cdd:PRK01156 623 EIENEANNLNNKYNEIQENKILIEKLrGKIDNYKKQIAEIDSIIPDLKE-ITSRINDIEDNLKKSRKALDDakaNRARLE 701
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681414 1143 VKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDD 1220
Cdd:PRK01156 702 STIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAFDKSGVPAMIRKSASQAMTSLTRKYLFEFNLDFDD 779
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
349-781 |
3.66e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 51.59 E-value: 3.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 349 AATKERCKQLTQEMmteKERSSVVMARMKERIGTLEKEHNiFQNKMHVSYQETQQMQmkfeQVREQMEAEIAHLKQENGI 428
Cdd:PRK10929 19 AATAPDEKQITQEL---EQAKAAKTPAQAEIVEALQSALN-WLEERKGSLERAKQYQ----QVIDNFPKLSAELRQQLNN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 429 LRDAVSNttnqLESKQSAelNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRT 508
Cdd:PRK10929 91 ERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 509 AEHEAAQQdlqSKFVAKENEVQSLHSKLtdtlvskQQLEqrLMQLmeSEQKRasQEES-MQIQVQDilEQNEALKAQIQQ 587
Cdd:PRK10929 165 TPNTPLAQ---AQLTALQAESAALKALV-------DELE--LAQL--SANNR--QELArLRSELAK--KRSQQLDAYLQA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 588 FHSQIAAQ---------TSASVLAE---ELHKVIAE---KDKQLKQTEDSLASEQDHLASKE-QELKDVQNVNFLLKA-- 649
Cdd:PRK10929 227 LRNQLNSQrqreaeralESTELLAEqsgDLPKSIVAqfkINRELSQALNQQAQRMDLIASQQrQAASQTLQVRQALNTlr 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 650 -EVQKLQALAKEQAAAAHEVEK---MQKSvhvkddkirlleEQLQREVAS-RVEELK---ILNDQNKALQLEVQKLQAVV 721
Cdd:PRK10929 307 eQSQWLGVSNALGEALRAQVARlpeMPKP------------QQLDTEMAQlRVQRLRyedLLNKQPQLRQIRQADGQPLT 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958681414 722 SEQpnkdvveqmkKCIQekDEKLRTVEELLETGLIQVATREEELNAIRTENSSLT---KEVQE 781
Cdd:PRK10929 375 AEQ----------NRIL--DAQLRTQRELLNSLLSGGDTLILELTKLKVANSQLEdalKEVNE 425
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
935-1253 |
5.94e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.09 E-value: 5.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 935 SKKAELLKEVQDENKLFKSQVEQLNHQNHQQasfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKK----NNDLR 1010
Cdd:COG1196 209 AEKAERYRELKEELKELEAELLLLKLRELEA----ELEELEAELEELEAELEELEAELAELEAELEELRLEleelELELE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1011 EKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKdllkrlfpavsvpshsnysewLRSFEKKAKAcmagpsDTE 1090
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE---------------------LAELEEELEE------LEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1091 AVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVE---QEESKWKVKAEESRRTIQQMQSSFTASEQELE 1167
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEelaEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1168 RLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQ 1247
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
....*.
gi 1958681414 1248 NEQTER 1253
Cdd:COG1196 498 EAEADY 503
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
731-1026 |
6.29e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.70 E-value: 6.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 731 EQMKK--CIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENssLTKEVQELKAKqmdqvayvLVPFVSLIEDLKKVI 808
Cdd:PRK05771 4 VRMKKvlIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRK--LRSLLTKLSEA--------LDKLRSYLPKLNPLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 809 HEKDGQIKSVEELLEVELLKVANK-EKTVQALKQEIEILKEEIgnaqlekahqlsvtsqvQELQNLLrgkeEQVDSMKA- 886
Cdd:PRK05771 74 EEKKKVSVKSLEELIKDVEEELEKiEKEIKELEEEISELENEI-----------------KELEQEI----ERLEPWGNf 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 887 --ALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDT--------KSDLSKKAELLKEVQDENKlfksqve 956
Cdd:PRK05771 133 dlDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYvyvvvvvlKELSDEVEEELKKLGFERL------- 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 957 qlnhqnhqqaSFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDL-----------REKNwEAMEALASTEK 1025
Cdd:PRK05771 206 ----------ELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEEllalyeyleieLERA-EALSKFLKTDK 274
|
.
gi 1958681414 1026 I 1026
Cdd:PRK05771 275 T 275
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1091-1267 |
7.09e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 7.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1091 AVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLR 1170
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1171 HENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQNEQ 1250
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170
....*....|....*..
gi 1958681414 1251 TERKKVADDLHKAQQSL 1267
Cdd:COG1196 393 RAAAELAAQLEELEEAE 409
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
801-1268 |
7.09e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 7.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 801 IEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQ 880
Cdd:PRK03918 191 IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKEL---ESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 881 VDSMKAALEDLTGREKctqvcstpRFEElenvLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLnh 960
Cdd:PRK03918 268 IEELKKEIEELEEKVK--------ELKE----LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL-- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 961 qnhqqasfpsqEELQTVISEKEKEITDLCNELESLKNAVEhqrkKNNDLREKNwEAMEALASTEKILQ-DRVNKTSKERQ 1039
Cdd:PRK03918 334 -----------EEKEERLEELKKKLKELEKRLEELEERHE----LYEEAKAKK-EELERLKKRLTGLTpEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1040 QQVEAVELESKDLLKRLFPAVSVPSHSNYS-EWLRSFEKKAKACMAGPSD----------TEAVKVLEHRLKEANEMHTL 1108
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAiEELKKAKGKCPVCGRELTEehrkelleeyTAELKRIEKELKEIEEKERK 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1109 LQLECEKYKSVLAETEGILQKLQ-----RSVEQEESKWKV-KAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRRE 1182
Cdd:PRK03918 478 LRKELRELEKVLKKESELIKLKElaeqlKELEEKLKKYNLeELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKK 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1183 REHLEIELEKAEVERSTYVMEVR--------ELKDLLTELQK------KLDDSYSEAVRQNEELNLLKTQLNETHSKLQN 1248
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEelgfesveELEERLKELEPfyneylELKDAEKELEREEKELKKLEEELDKAFEELAE 637
|
490 500
....*....|....*....|
gi 1958681414 1249 EQTERKKVADDLHKAQQSLN 1268
Cdd:PRK03918 638 TEKRLEELRKELEELEKKYS 657
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
476-1060 |
7.96e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 7.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 476 KKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSkltdtlvSKQQLEQRLMQLME 555
Cdd:PTZ00121 1236 KKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE-------AKKAEEKKKADEAK 1308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 556 SEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ 635
Cdd:PTZ00121 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 636 ELKdvqnvnfllKAEvqKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQ 715
Cdd:PTZ00121 1389 EKK---------KAD--EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 716 KLQAVVSEQPNKDVVEQMKKCIQEK---DEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAy 792
Cdd:PTZ00121 1458 KAEEAKKKAEEAKKADEAKKKAEEAkkaDEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA- 1536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 793 vlvpfvsliEDLKKVIHEKdgqiKSVEELLEVELLKVANKEKTVQALKQEieilkeEIGNAQLEKAHQLSVTSQVQELQN 872
Cdd:PTZ00121 1537 ---------DEAKKAEEKK----KADELKKAEELKKAEEKKKAEEAKKAE------EDKNMALRKAEEAKKAEEARIEEV 1597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 873 LLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKD-NEIKRIEAILKDTKSDLSKKAELLKEVQDENKLF 951
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA 1677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 952 KSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEamealaSTEKILQDRV 1031
Cdd:PTZ00121 1678 EEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEE------DKKKAEEAKK 1751
|
570 580
....*....|....*....|....*....
gi 1958681414 1032 NKTSKERQQQVEAVELESKDLLKRLFPAV 1060
Cdd:PTZ00121 1752 DEEEKKKIAHLKKEEEKKAEEIRKEKEAV 1780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
603-1265 |
9.82e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 9.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 603 EELHKVIAEKDKQLKQTEDSLAS--EQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHvKDD 680
Cdd:PTZ00121 1053 DGNHEGKAEAKAHVGQDEGLKPSykDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDAR-KAE 1131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 681 KIRLLEEQLQREVASRVEELKILNDQNKALqlEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEElletgliqvAT 760
Cdd:PTZ00121 1132 EARKAEDARKAEEARKAEDAKRVEIARKAE--DARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAED---------AR 1200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 761 REEElnAIRTENSSLTKEVQELK-AKQMDQVAYVlvpfvsliEDLKKVIHE--KDGQIKSVEELLEVELLKVANKEKTVQ 837
Cdd:PTZ00121 1201 KAEA--ARKAEEERKAEEARKAEdAKKAEAVKKA--------EEAKKDAEEakKAEEERNNEEIRKFEEARMAHFARRQA 1270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 838 ALKQEIEILKEEIGNAQ-LEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQvcstprfeelenvLKEK 916
Cdd:PTZ00121 1271 AIKAEEARKADELKKAEeKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADA-------------AKKK 1337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 917 DNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQlnhqnhqqasfpSQEELQTVISEKEKEitdlcnelESLK 996
Cdd:PTZ00121 1338 AEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK------------KADAAKKKAEEKKKA--------DEAK 1397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 997 NAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVEleskDLLKRLFPAVSVPSHSNYSEWLRSFE 1076
Cdd:PTZ00121 1398 KKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKAD----EAKKKAEEAKKAEEAKKKAEEAKKAD 1473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1077 KKAKACMAGPSDTEAVKVLEHRLKEANEmhtLLQLECEKYKSVLAETEGILQKLQRSVEQEESKwkvKAEESRRTIQQMQ 1156
Cdd:PTZ00121 1474 EAKKKAEEAKKADEAKKKAEEAKKKADE---AKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK---KADEAKKAEEKKK 1547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1157 SSFTASEQELERlRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKklddSYSEAVRQNEELNLLK 1236
Cdd:PTZ00121 1548 ADELKKAEELKK-AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKK----MKAEEAKKAEEAKIKA 1622
|
650 660
....*....|....*....|....*....
gi 1958681414 1237 TQLNETHSKLQNEQTERKKVADDLHKAQQ 1265
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
442-642 |
1.80e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 442 SKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL--Q 519
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELeaQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 520 SKFVAKENEVQSLHSKLTDTLV-----SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA 594
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1958681414 595 QTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN 642
Cdd:COG4942 183 LEEE---RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
411-641 |
1.94e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 411 VREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDCGrlVSELNEKTGKLQQegvQKKNAEQAAAQLKVQL 490
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQKNG--LVDLSEEAKLLLQ---QLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 491 QEAERRWEEVQSYIRKRTAEHEAAQQDlqskfvakeNEVQSLHSKLtdtlvskQQLEQRLMQLMESEQKRASQeesmqiq 570
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPELLQS---------PVIQQLRAQL-------AELEAELAELSARYTPNHPD------- 292
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958681414 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVlaeelhKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQ 641
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAEL------EALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
453-1310 |
4.41e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.19 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 453 QDCGRLVSELNEKTGKlqqegvQKKNAEQAAAQLKVQLQEAERRwEEVQSYIRKRTAEheaAQQDLQSKFVAKENEVQSL 532
Cdd:pfam15921 88 KDLQRRLNESNELHEK------QKFYLRQSVIDLQTKLQEMQME-RDAMADIRRRESQ---SQEDLRNQLQNTVHELEAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 533 HSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQvqdiLEQNEALKAQIQQFHSQIAAQTSASVLAeelhKVIAEK 612
Cdd:pfam15921 158 KCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVD----FEEASGKKIYEHDSMSTMHFRSLGSAIS----KILREL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 613 DKQLKQTEDSLASEQDHLASkeqelkdvqnvnflLKAEVQKlqalakeqaaaaheveKMQKSVHVKDDKIRLLEEQLQRE 692
Cdd:pfam15921 230 DTEISYLKGRIFPVEDQLEA--------------LKSESQN----------------KIELLLQQHQDRIEQLISEHEVE 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 693 VASRVEELKILNDQNKALQLEVQKLQAVVSEQPN------KDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELN 766
Cdd:pfam15921 280 ITGLTEKASSARSQANSIQSQLEIIQEQARNQNSmymrqlSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 767 AIRTENSSLTKEVQELKakqmDQVAYVLVPF------VSLIEDLKKVIHEKDG----QIKSVEELLEVELLKVANKEKTV 836
Cdd:pfam15921 360 EARTERDQFSQESGNLD----DQLQKLLADLhkrekeLSLEKEQNKRLWDRDTgnsiTIDHLRRELDDRNMEVQRLEALL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 837 QALKQEIEILKE------EIGNAQLEKAHqlSVTSQVQELQNLLRGKEEQVDSMKAALEDltgrekctqvcSTPRFEELE 910
Cdd:pfam15921 436 KAMKSECQGQMErqmaaiQGKNESLEKVS--SLTAQLESTKEMLRKVVEELTAKKMTLES-----------SERTVSDLT 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 911 NVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENklfksqveqlNHQNHQQASFpsqEELQTVISEKEKEITDLCN 990
Cdd:pfam15921 503 ASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG----------DHLRNVQTEC---EALKLQMAEKDKVIEILRQ 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 991 ELESLKNAV-EHQRKKNNDLREKNWEAMEA----LASTE-KILQDRVNKTSKERQQQVEAVELEskdllkrlfpavsvps 1064
Cdd:pfam15921 570 QIENMTQLVgQHGRTAGAMQVEKAQLEKEIndrrLELQEfKILKDKKDAKIRELEARVSDLELE---------------- 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1065 hsnysewlrsfekKAKACMAGPSDTEAVK-VLEHRLKEANEMHTllqlecekyksvlaeTEGILQKLQRSVEQEESKWKV 1143
Cdd:pfam15921 634 -------------KVKLVNAGSERLRAVKdIKQERDQLLNEVKT---------------SRNELNSLSEDYEVLKRNFRN 685
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1144 KAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKaeverstyvmEVRELKDLLTELQKKLDDSYS 1223
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQK----------QITAKRGQIDALQSKIQFLEE 755
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1224 EAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKIS-LKAAGDTVVIENNDISPEMGSPEKETM 1302
Cdd:pfam15921 756 AMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVAnMEVALDKASLQFAECQDIIQRQEQESV 835
|
....*...
gi 1958681414 1303 SVSLTQTV 1310
Cdd:pfam15921 836 RLKLQHTL 843
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
416-959 |
5.81e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.75 E-value: 5.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 416 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdcgRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQE 492
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 493 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQ 570
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKViaeKDKQLKQTEDSLASEQDHLASKEQELKDVQNVnflLKAE 650
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERL---KKRLTGLTPEKLEKELEELEKAKEEIEEEISK---ITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 651 VQKLQALAKEQAAAAHEVEKMQKSVHV------KDDKIRLLEEQLqREVASRVEELKILNDQNKALQLEVQKLQAVVSEQ 724
Cdd:PRK03918 414 IGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYT-AELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 725 PNKDVVEQMKKCIQEKDEKLRTVE-ELLETGLIQVATREEELNAIRTENSSLTKEVQELKA--KQMDQVAYVLVPFVSLI 801
Cdd:PRK03918 493 SELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkKKLAELEKKLDELEEEL 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 802 EDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEkahqlsvtsqvqelqnlLRGKEEQV 881
Cdd:PRK03918 573 AELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEE-----------------LDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 882 DSMKAALEDLTGR-EKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKS---DLSKKAELLKEVQDENKLFKSQVEQ 957
Cdd:PRK03918 636 AETEKRLEELRKElEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKrreEIKKTLEKLKEELEEREKAKKELEK 715
|
..
gi 1958681414 958 LN 959
Cdd:PRK03918 716 LE 717
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
835-1268 |
6.17e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 835 TVQALKQEIEILKEEIGNAQLEKAhqlSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprfEELENVLK 914
Cdd:COG4913 282 RLWFAQRRLELLEAELEELRAELA---RLEAELERLEARLDALREELDELEAQIRGNGGDRL----------EQLEREIE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 915 EKDNEIKRIEAILKDTKSDLSK-------KAELLKEVQDENKLFKSQVEQLNHQNHQQASfpsqeELQTVISEKEKEITD 987
Cdd:COG4913 349 RLERELEERERRRARLEALLAAlglplpaSAEEFAALRAEAAALLEALEEELEALEEALA-----EAEAALRDLRRELRE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 988 LCNELESLKnavehQRKKNNDLR-------------------------------EKNWE-AMEALAST-----------E 1024
Cdd:COG4913 424 LEAEIASLE-----RRKSNIPARllalrdalaealgldeaelpfvgelievrpeEERWRgAIERVLGGfaltllvppehY 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1025 KILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVP-----SHSNYSEWLRSF------------------EKKA-- 1079
Cdd:COG4913 499 AAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAgkldfKPHPFRAWLEAElgrrfdyvcvdspeelrrHPRAit 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1080 KACMA---------------------GPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE 1138
Cdd:COG4913 579 RAGQVkgngtrhekddrrrirsryvlGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSW 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1139 SKwkVKAEESRRTIQQMqssftasEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKL 1218
Cdd:COG4913 659 DE--IDVASAEREIAEL-------EAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEEL 729
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1219 DDSYSEAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSLN 1268
Cdd:COG4913 730 DELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALR 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
667-996 |
6.17e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 667 EVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRT 746
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERY-----QALLKEKREYEGYELLKEKEALERQ----KEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 747 VEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAyvlvpfvSLIEDLKKVIHEKDGQIKSVEELLEVEL 826
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVK-------EKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 827 LKVANKEKTVQALKQEIEILKEEIGNAQLEKAhqlSVTSQVQELQ---NLLRGKEEQVDSMKAALEDLTGREKCTQVCST 903
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRD---KLTEEYAELKeelEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 904 PRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE-----LQTVI 978
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEqelydLKEEY 478
|
330
....*....|....*...
gi 1958681414 979 SEKEKEITDLCNELESLK 996
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAE 496
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
289-980 |
6.39e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 6.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 289 LSLKTMMFSEDEALCVVDLLKEKSGVIKEAlkksnKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER 368
Cdd:TIGR02169 277 LNKKIKDLGEEEQLRVKEKIGELEAEIASL-----ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKR 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 369 SSVVMARMKERIGTLEKEHNIFQN---KMHVSYQETQQMQMKFEQVREQME---AEIAHLKQENGILRDAVSNTTNQLES 442
Cdd:TIGR02169 352 RDKLTEEYAELKEELEDLRAELEEvdkEFAETRDELKDYREKLEKLKREINelkRELDRLQEELQRLSEELADLNAAIAG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 443 KQsAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKF 522
Cdd:TIGR02169 432 IE-AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGR 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 523 VAKE---NEVQSLHSKLT---------------------------DTLVSKQQLEQ--------------RLMQLMESEQ 558
Cdd:TIGR02169 511 AVEEvlkASIQGVHGTVAqlgsvgeryataievaagnrlnnvvveDDAVAKEAIELlkrrkagratflplNKMRDERRDL 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 559 KRASQEESMQIQV-----------------QD--ILEQNEALKAQIQQFH---------SQIAAQTSASVLAEELHKVIA 610
Cdd:TIGR02169 591 SILSEDGVIGFAVdlvefdpkyepafkyvfGDtlVVEDIEAARRLMGKYRmvtlegelfEKSGAMTGGSRAPRGGILFSR 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 611 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQ 690
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 691 REVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 770
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR----IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL 826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 771 ENSSLTKEVQELKAKQMDqvayvlvpFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEI 850
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRID--------LKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 851 GNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCsTPRFEELENVLKEKDNEIKRIEAI---- 926
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRALEPVnmla 977
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 927 ------LKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISE 980
Cdd:TIGR02169 978 iqeyeeVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINENFNEIFAE 1037
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
611-995 |
6.80e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 6.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 611 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAhEVEKMQKSVHVKDDKIRLLEEQLQ 690
Cdd:COG4717 78 EELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 691 rEVASRVEELKILNDQNKALQLEVQKLQAVVSEQpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 770
Cdd:COG4717 157 -ELRELEEELEELEAELAELQEELEELLEQLSLA-TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 771 ENSSLTKEVQELKAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILkeei 850
Cdd:COG4717 235 ELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL---- 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 851 gnAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLtgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDT 930
Cdd:COG4717 311 --PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEE 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958681414 931 KSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESL 995
Cdd:COG4717 387 LRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEEL 451
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
477-637 |
1.20e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 477 KNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSkfvakENEVQSLHSkltdtlvskqQLEQRLMQLmeS 556
Cdd:COG3096 508 QALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDA-----AEELEELLA----------ELEAQLEEL--E 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 557 EQKRASQEESMQIQvqdilEQNEALKAQIQQFHSQ----IAAQTSASVLAEELHKVIA-------------EKDKQLKQT 619
Cdd:COG3096 571 EQAAEAVEQRSELR-----QQLEQLRARIKELAARapawLAAQDALERLREQSGEALAdsqevtaamqqllEREREATVE 645
|
170
....*....|....*...
gi 1958681414 620 EDSLASEQDHLASKEQEL 637
Cdd:COG3096 646 RDELAARKQALESQIERL 663
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
444-600 |
1.83e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 45.13 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 444 QSAELNKLRQDCGRLVSELNEKTGKLQQEGVQkknAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL----- 518
Cdd:pfam09787 59 LREEIQKLRGQIQQLRTELQELEAQQQEEAES---SREQLQELEEQLATERSARREAEAELERLQEELRYLEEELrrska 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 519 --QSKFVAKENEVQSLHSKLTD---TLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIA 593
Cdd:pfam09787 136 tlQSRIKDREAEIEKLRNQLTSksqSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVLQLERMEQQIKELQGEGS 215
|
....*..
gi 1958681414 594 AQTSASV 600
Cdd:pfam09787 216 NGTSINM 222
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
468-753 |
2.41e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 468 KLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 547
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 548 QRLMQLmesEQKRASQEEsmqiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLA--EELHKVIAEK--DKQLKQTEDSL 623
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAaqEKIHVEILEEqlEKLRNELLIRG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 624 ASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLqreVASRVEELKIL 703
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1958681414 704 NDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLET 753
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQDLRDKVDKLEAS 339
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
470-709 |
2.74e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 470 QQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVakENEVQSLHSKLTDTLVSKQQLEQR 549
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLL--LQQLSELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 550 LMQLmesEQKRASQEESMQIQVQDILEQNeaLKAQIQQFHSQIAAQtsaSVLAEELHKVIAEKDKQLKQTEDSLASEqdh 629
Cdd:COG3206 242 LAAL---RAQLGSGPDALPELLQSPVIQQ--LRAQLAELEAELAEL---SARYTPNHPDVIALRAQIAALRAQLQQE--- 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 630 laskeqelkdVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQ------REVASRVEELKIL 703
Cdd:COG3206 311 ----------AQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEvarelyESLLQRLEEARLA 380
|
....*.
gi 1958681414 704 NDQNKA 709
Cdd:COG3206 381 EALTVG 386
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
866-1266 |
4.43e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 4.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 866 QVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAILK--DTKSDLSKKAELLKE 943
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEE--------ELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 944 VQDENKLFKSQVEQLNHQNHQQasfpsqEELQTVISEKEKEITDLCNEL-ESLKNAVEHQRKKNNDLREKNWEAMEALAS 1022
Cdd:COG4717 144 LPERLEELEERLEELRELEEEL------EELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1023 TEKILQD---RVNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKACMAGPSDTEAVKVLEHRL 1099
Cdd:COG4717 218 AQEELEEleeELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1100 KEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRtIQQMQSSFTASEQELERLRHENKAMENL 1179
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE-LQELLREAEELEEELQLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1180 RREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQN-----EELNLLKTQLNETHSKLQNEQTERK 1254
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDeeeleEELEELEEELEELEEELEELREELA 456
|
410
....*....|..
gi 1958681414 1255 KVADDLHKAQQS 1266
Cdd:COG4717 457 ELEAELEQLEED 468
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
972-1275 |
4.98e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 972 EELQTVISEKEKEITDLCNELESLKNAVEHQRKKNN---DLREKNWEAMEA--------LASTEKILQDRVNKTSkERQQ 1040
Cdd:TIGR02169 187 ERLDLIIDEKRQQLERLRREREKAERYQALLKEKREyegYELLKEKEALERqkeaierqLASLEEELEKLTEEIS-ELEK 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1041 QVEAVELESKDLLKRLFPAVSVPSHSNYSEwLRSFEKKAKACMAgpsdteAVKVLEHRLKEANEMHTLLQLECEKYKSVL 1120
Cdd:TIGR02169 266 RLEEIEQLLEELNKKIKDLGEEEQLRVKEK-IGELEAEIASLER------SIAEKERELEDAEERLAKLEAEIDKLLAEI 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1121 AETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKaeversty 1200
Cdd:TIGR02169 339 EELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDR-------- 410
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958681414 1201 vmevreLKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKIS 1275
Cdd:TIGR02169 411 ------LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYD 479
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1095-1267 |
6.37e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1095 LEHRLKEANE-MHTLLQLE--CEKYKSvLAETEGILQKLQRSV-----EQEESKWKVKAEESRRTIQQMQSSFTASEQEL 1166
Cdd:COG4913 240 AHEALEDAREqIELLEPIRelAERYAA-ARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEARL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1167 ERLRHENKAMENLRRER-----EHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNE 1241
Cdd:COG4913 319 DALREELDELEAQIRGNggdrlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEE 398
|
170 180
....*....|....*....|....*.
gi 1958681414 1242 THSKLQNEQTERKKVADDLHKAQQSL 1267
Cdd:COG4913 399 ELEALEEALAEAEAALRDLRRELREL 424
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
475-684 |
7.95e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 7.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 475 QKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQ---DLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 551
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 552 QLME--SEQKRASQEESMQIQVQDILEQ----------------NEALKAQIQQFHSQIAA----QTSASVLAEELHKVI 609
Cdd:COG4942 101 AQKEelAELLRALYRLGRQPPLALLLSPedfldavrrlqylkylAPARREQAEELRADLAElaalRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958681414 610 AEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRL 684
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
435-724 |
8.22e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 8.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 435 NTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQ---EAERRWEEVQSYIRKRtaEH 511
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmamERERELERIRQEERKR--EL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 512 EAAQQDLQSKFVAKENEVQSLHskltdtlVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQiQQFHSQ 591
Cdd:pfam17380 363 ERIRQEEIAMEISRMRELERLQ-------MERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAE-QEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 592 IAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASK--------EQELKDVQNVNFL---LKAEVQKLQALAKE 660
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKlelekekrDRKRAEEQRRKILekeLEERKQAMIEEERK 514
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958681414 661 QAAAAHEVEKMQKSVHvKDDKIRLLEEQLQREVasRVEELKILNDQNKALQLEVQKLQAVVSEQ 724
Cdd:pfam17380 515 RKLLEKEMEERQKAIY-EEERRREAEEERRKQQ--EMEERRRIQEQMRKATEERSRLEAMERER 575
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
412-653 |
8.32e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.05 E-value: 8.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK--------LRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAA 483
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETngqaqrdaILEESRAVTKELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 484 AQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRASQ 563
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 564 EESMQIQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQLKQTEDSLASEQ----DHLASKEQ 635
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDESDKPNRQgaagSGLSGKAY 1795
|
250
....*....|....*...
gi 1958681414 636 ELKDVQNVNFLLKAEVQK 653
Cdd:NF012221 1796 SVEGVAEPGSHINPDSPA 1813
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
542-1268 |
8.36e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.81 E-value: 8.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 542 SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEElhKVIAEKDKQLKQTED 621
Cdd:pfam02463 216 KEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEE--KEKKLQEEELKLLAK 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 622 SLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKD-----------DKIRLLEEQLQ 690
Cdd:pfam02463 294 EEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKReaeeeeeeeleKLQEKLEQLEE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 691 REVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQ--EKDEKLRTVEELLETGLIQVATREEELNAI 768
Cdd:pfam02463 374 ELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLkeEKKEELEILEEEEESIELKQGKLTEEKEEL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 769 RTENSSLTKEVQELKAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKE 848
Cdd:pfam02463 454 EKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGD 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 849 EIGNAQLEKAHqlSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILK 928
Cdd:pfam02463 534 LGVAVENYKVA--ISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKA 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 929 DTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNEL-----------ESLKN 997
Cdd:pfam02463 612 TLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELleiqelqekaeSELAK 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 998 AVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEK 1077
Cdd:pfam02463 692 EEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1078 KAKACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQS 1157
Cdd:pfam02463 772 KEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKL 851
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1158 SFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKT 1237
Cdd:pfam02463 852 AEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILL 931
|
730 740 750
....*....|....*....|....*....|.
gi 1958681414 1238 QLNETHSKLQNEQTERKKVADDLHKAQQSLN 1268
Cdd:pfam02463 932 KYEEEPEELLLEEADEKEKEENNKEEEEERN 962
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
801-1005 |
8.45e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 8.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 801 IEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAH-QLSVTSQVQELQNLLRG--K 877
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAElRAELEAQKEELAELLRAlyR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 878 EEQVDSMKAAL--EDLTGREKCTQVcstprFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQV 955
Cdd:COG4942 116 LGRQPPLALLLspEDFLDAVRRLQY-----LKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAAL 190
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1958681414 956 EQL-NHQNHQQASFPSQE-ELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1005
Cdd:COG4942 191 EALkAERQKLLARLEKELaELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
746-943 |
8.47e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 8.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 746 TVEELLETgLIQVATREEELNAIRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVE 825
Cdd:COG1579 1 AMPEDLRA-LLDLQELDSELDRLEHRLKELPAELAELE-DELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 826 LLKVAN--KEKTVQALKQEIEILKEEIgnAQLEKaHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTgrekctqvcst 903
Cdd:COG1579 79 EEQLGNvrNNKEYEALQKEIESLKRRI--SDLED-EILELMERIEELEEELAELEAELAELEAELEEKK----------- 144
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1958681414 904 prfEELENVLKEKDNEIKRIEAILKDTKSDLSkkAELLKE 943
Cdd:COG1579 145 ---AELDEELAELEAELEELEAEREELAAKIP--PELLAL 179
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
324-1247 |
9.60e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 9.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 324 KGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQ 403
Cdd:TIGR01612 785 KSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDS 864
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 404 MQMKFEQVREQMEAEIAHlkqengilrDAVSNTTNQLESKQSAelnklrqdcgrlvseLNEKTGKLQQEGVQKKNAEQAA 483
Cdd:TIGR01612 865 EHEQFAELTNKIKAEISD---------DKLNDYEKKFNDSKSL---------------INEINKSIEEEYQNINTLKKVD 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 484 AQLKVqlqeAERRWEEVQSYIRKRTAEHEAAQQDLqsKFVAKENEVQ-SLHSKLTDTLVSKQQLEQRLMQLMESEQKRAS 562
Cdd:TIGR01612 921 EYIKI----CENTKESIEKFHNKQNILKEILNKNI--DTIKESNLIEkSYKDKFDNTLIDKINELDKAFKDASLNDYEAK 994
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 563 QEESMQIqVQDILEQNEALKAQI--QQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELkdv 640
Cdd:TIGR01612 995 NNELIKY-FNDLKANLGKNKENMlyHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIEL--- 1070
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 641 QNVNFLLKAEV---------QKLQALAKEQAAAAHEVEKMQKSVHVKDDkIRLLEEQLQREVASRVEELKILNDQNKALQ 711
Cdd:TIGR01612 1071 LNKEILEEAEInitnfneikEKLKHYNFDDFGKEENIKYADEINKIKDD-IKNLDQKIDHHIKALEEIKKKSENYIDEIK 1149
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 712 LEVQKLQAVVSEQPNKDVVEQMKKCIQE---KDEKLRTVEELLETGLIQVATREEE---LNAIRTENSSLTKEVQELKAK 785
Cdd:TIGR01612 1150 AQINDLEDVADKAISNDDPEEIEKKIENivtKIDKKKNIYDEIKKLLNEIAEIEKDktsLEEVKGINLSYGKNLGKLFLE 1229
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 786 QMDQ----VAYVLVPFVSLIEDLKKvIHEKDGQIKSVEELLEVELLKVA------NKEKTVQALKQEIEILKEEIGNAQL 855
Cdd:TIGR01612 1230 KIDEekkkSEHMIKAMEAYIEDLDE-IKEKSPEIENEMGIEMDIKAEMEtfnishDDDKDHHIISKKHDENISDIREKSL 1308
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 856 EKAHQLSVTSQVQELQNLLrgKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKSDLS 935
Cdd:TIGR01612 1309 KIIEDFSEESDINDIKKEL--QKNLLDAQKHNSDINLYLNEIANIYNILKLNKIKKIIDEVKEYTKEIEENNKNIKDELD 1386
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 936 KKAELLKEVQDENKL--FKSQVEQLNHQNHQQASFPSQEELQTVI--------------SEKEKEITDLCNELESLKNAV 999
Cdd:TIGR01612 1387 KSEKLIKKIKDDINLeeCKSKIESTLDDKDIDECIKKIKELKNHIlseesnidtyfknaDENNENVLLLFKNIEMADNKS 1466
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1000 EH--QRKKNNDLREKNWEAMEAlasteKILQDRVNKTSKERQQQVEAVElESKDLLKRLFPAVSVPSHSNYSEWLRSFEK 1077
Cdd:TIGR01612 1467 QHilKIKKDNATNDHDFNINEL-----KEHIDKSKGCKDEADKNAKAIE-KNKELFEQYKKDVTELLNKYSALAIKNKFA 1540
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1078 KAKacmagpSDTEAVkvlehrLKEANEMHTLLQLECEKYKSVLAEtegiLQKLQRSVEQEESkwkvKAEESRRTIQQMQS 1157
Cdd:TIGR01612 1541 KTK------KDSEII------IKEIKDAHKKFILEAEKSEQKIKE----IKKEKFRIEDDAA----KNDKSNKAAIDIQL 1600
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1158 SFTASEQELERLRHENKAMENLRREREHLEIELEKAEVErsTYVMEVRELKDLLTELQKKLDDSYSeavrQNEELNLLKT 1237
Cdd:TIGR01612 1601 SLENFENKFLKISDIKKKINDCLKETESIEKKISSFSID--SQDTELKENGDNLNSLQEFLESLKD----QKKNIEDKKK 1674
|
970
....*....|
gi 1958681414 1238 QLNETHSKLQ 1247
Cdd:TIGR01612 1675 ELDELDSEIE 1684
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
412-532 |
1.11e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQE-------GVQKKNAEQAAA 484
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLeallaalGLPLPASAEEFA 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1958681414 485 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
320-532 |
1.19e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 320 KKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMmtekerssvvmARMKERIGTLEKEHNIFQNKMHVSYQ 399
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI-----------AALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 400 ETQQMQMKFEQVREQMEAEIAHLKQENGI-----------LRDAVSNTT--NQLESKQSAELNKLRQDcgrlVSELNEKT 466
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQpplalllspedFLDAVRRLQylKYLAPARREQAEELRAD----LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958681414 467 GKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
592-752 |
1.22e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 592 IAAQTSASVLAEELHKVIAEKDKQlkqTEDSLASEQDHLASKEQELKDvqnvnflLKAEVQKLQalakeqaaaaHEVEKM 671
Cdd:COG2433 373 IRGLSIEEALEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRR-------LEEQVERLE----------AEVEEL 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 672 QKSVHVKDDKIRLLEEQLQRevASRVEELKILNDQnkalqlEVQKLQAvvseqpnkdVVEQMKKCIQEKDEKLRTVEELL 751
Cdd:COG2433 433 EAELEEKDERIERLERELSE--ARSEERREIRKDR------EISRLDR---------EIERLERELEEERERIEELKRKL 495
|
.
gi 1958681414 752 E 752
Cdd:COG2433 496 E 496
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
828-1040 |
1.27e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 828 KVANKEKTVQALKQEIEILKEEIGNAQLEKAHQL----SVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCST 903
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLkqlaALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 904 PRFEELENVLKE--KDNEIKRIEAILK-DTKSDLSKKAELLKEVQDENKlfkSQVEQLNHQnhqqasfpsQEELQTVISE 980
Cdd:COG4942 101 AQKEELAELLRAlyRLGRQPPLALLLSpEDFLDAVRRLQYLKYLAPARR---EQAEELRAD---------LAELAALRAE 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 981 KEKEItdlcNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQ 1040
Cdd:COG4942 169 LEAER----AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
409-597 |
1.33e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 409 EQVREQM---EAEIAHLKQENGILrdAVSNTTNQLESKQS---AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQA 482
Cdd:COG3206 185 PELRKELeeaEAALEEFRQKNGLV--DLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 483 AA--QLKVQLQEAERRWEE-----------VQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQR 549
Cdd:COG3206 263 PViqQLRAQLAELEAELAElsarytpnhpdVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1958681414 550 LMQLMESEQKRASQEESMQIQvQDILEQneaLKAQIQQFHSQIAAQTS 597
Cdd:COG3206 343 LAELPELEAELRRLEREVEVA-RELYES---LLQRLEEARLAEALTVG 386
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1095-1279 |
1.42e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1095 LEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKwKVKAEESRRTIQQMQSSFTASEQELERLRHEN- 1173
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEE-LEEAEEELEEAEAELAEAEEALLEAEAELAEAe 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1174 --------------KAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQL 1239
Cdd:COG1196 379 eeleelaeellealRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE 458
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1958681414 1240 NETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKISLKAA 1279
Cdd:COG1196 459 EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1090-1267 |
1.52e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1090 EAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETE-------GILQKLQRSVEQEESKWKVKAEESRRTIQQMQssftAS 1162
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLELEELEleleeaqAEEYELLAELARLEQDIARLEERRRELEERLE----EL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1163 EQELERLRHE----NKAMENLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQ 1238
Cdd:COG1196 322 EEELAELEEEleelEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
170 180
....*....|....*....|....*....
gi 1958681414 1239 LNETHSKLQNEQTERKKVADDLHKAQQSL 1267
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEAL 430
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
460-641 |
1.64e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 460 SELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDT 539
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----EAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 540 LVSKQQ---LEQRLMQLMESEQ-----KRASQEESMQIQVQDILEQNEALKAQIQQFHSQI--------AAQTSASVLAE 603
Cdd:COG3883 92 ARALYRsggSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELeaklaeleALKAELEAAKA 171
|
170 180 190
....*....|....*....|....*....|....*...
gi 1958681414 604 ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQ 641
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
906-1205 |
1.92e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 906 FEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEI 985
Cdd:pfam17380 336 YAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKI 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 986 TDLCNELESLKNAVEHQRKknndlreknwEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFpavsvpsh 1065
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQ----------REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKL-------- 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1066 snysEWLRSFEKKAKAcmagpsDTEAVKVLEHRLKEANEM-------HTLLQLECEKYKSVLAETEgilqklQRSVEQEE 1138
Cdd:pfam17380 478 ----ELEKEKRDRKRA------EEQRRKILEKELEERKQAmieeerkRKLLEKEMEERQKAIYEEE------RRREAEEE 541
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958681414 1139 SKWKVKAEESRRTIQQMQSSfTASEQELERLRHENKAMenlrreREHLEIELEKAEVERSTYVMEVR 1205
Cdd:pfam17380 542 RRKQQEMEERRRIQEQMRKA-TEERSRLEAMEREREMM------RQIVESEKARAEYEATTPITTIK 601
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
744-1265 |
2.04e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 744 LRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQV--AYVLVPFVSLIEDLKKVIHEKDGQIKSVEEL 821
Cdd:PTZ00121 1026 IEKIEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLkpSYKDFDFDAKEDNRADEATEEAFGKAEEAKK 1105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 822 LEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVC 901
Cdd:PTZ00121 1106 TETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAE 1185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 902 STPRFEEL---ENVLK----EKDNEIKRIEAILK---DTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQ 971
Cdd:PTZ00121 1186 EVRKAEELrkaEDARKaeaaRKAEEERKAEEARKaedAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF 1265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 972 EELQTVISEKEKEITDLCNELESLKNAVE----HQRKKNNDLREKNWEAMEAlastekilqDRVNKTSKERQQQVEAVEL 1047
Cdd:PTZ00121 1266 ARRQAAIKAEEARKADELKKAEEKKKADEakkaEEKKKADEAKKKAEEAKKA---------DEAKKKAEEAKKKADAAKK 1336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1048 ESKDLLKRlfPAVSVPSHSNYSEWLRSFEKKAKAcmAGPSDTEAVKVLEHRLKEANEMHTLLQLEcEKYKSVLAETEGIL 1127
Cdd:PTZ00121 1337 KAEEAKKA--AEAAKAEAEAAADEAEAAEEKAEA--AEKKKEEAKKKADAAKKKAEEKKKADEAK-KKAEEDKKKADELK 1411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1128 QKLQRSVEQEESKWKV----KAEESRRTIQQMQSSftaseQELERLRHENKAMENLRREREhleiELEKAE--VERSTYV 1201
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAeekkKADEAKKKAEEAKKA-----DEAKKKAEEAKKAEEAKKKAE----EAKKADeaKKKAEEA 1482
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958681414 1202 MEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQlnETHSKLQNEQTERKKVADDLHKAQQ 1265
Cdd:PTZ00121 1483 KKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE--EAKKADEAKKAEEAKKADEAKKAEE 1544
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
506-727 |
2.05e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 506 KRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQI 585
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 586 QQFHSQIAAQTSASVLAEELHKV--------IAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQAL 657
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 658 AKEQAAAAHEVEKMQKSVhvkddkiRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNK 727
Cdd:COG4942 180 LAELEEERAALEALKAER-------QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
542-785 |
2.50e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 542 SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTED 621
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE---LAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 622 SLASEQDHLAS---KEQELKDVQNVNFLLKAEvqklqalakeqaaaahEVEKMQKSVHVkddkIRLLEEQLQREVASRVE 698
Cdd:COG4942 98 ELEAQKEELAEllrALYRLGRQPPLALLLSPE----------------DFLDAVRRLQY----LKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 699 ELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKE 778
Cdd:COG4942 158 DLAELAALRAELEAERAELEALLAEL--EEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*..
gi 1958681414 779 VQELKAK 785
Cdd:COG4942 236 AAAAAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
905-1239 |
2.63e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 905 RFEELENVLKEKDNEIKRieaiLKDTKSDLSKKAELLKEVQDenklfksqVEQLNHQNHQQASFPSQEELQTVISEKEKE 984
Cdd:TIGR02169 185 NIERLDLIIDEKRQQLER----LRREREKAERYQALLKEKRE--------YEGYELLKEKEALERQKEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 985 ITDLCNELESLKNAVEHQRKKNNDLREKnweaMEALASTEKI-LQDRVNKTSKERQQ---QVEAVELESKDLLKRLFPAV 1060
Cdd:TIGR02169 253 LEKLTEEISELEKRLEEIEQLLEELNKK----IKDLGEEEQLrVKEKIGELEAEIASlerSIAEKERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1061 SvpSHSNYSEWLRSFEKKAKacmagpsdTEAVKV--LEHRLKEANEMHTLLQLECEKyksvLAETEGILQKLQRSVEQEE 1138
Cdd:TIGR02169 329 A--EIDKLLAEIEELEREIE--------EERKRRdkLTEEYAELKEELEDLRAELEE----VDKEFAETRDELKDYREKL 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1139 SKWKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMEN----LRREREHLEIELEKAEVERSTYVMEVRELKDLLTEL 1214
Cdd:TIGR02169 395 EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAkineLEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDL 474
|
330 340
....*....|....*....|....*
gi 1958681414 1215 QKKLDDSYSEAVRQNEELNLLKTQL 1239
Cdd:TIGR02169 475 KEEYDRVEKELSKLQRELAEAEAQA 499
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
384-1015 |
2.77e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.02 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 384 EKEHNIFQNKMHVSYQET--QQMQMKFEQVREQMEAEIAHLK---QENGILRDAVS--NTTNQLESKQSAELNKLRQDCG 456
Cdd:pfam05483 103 QKENKLQENRKIIEAQRKaiQELQFENEKVSLKLEEEIQENKdliKENNATRHLCNllKETCARSAEKTKKYEYEREETR 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 457 RLVSELNEKTGKLQQEGVQ-KKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSK 535
Cdd:pfam05483 183 QVYMDLNNNIEKMILAFEElRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 536 LTDTLVSKQQLEQR-------LMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQT-SASVLAEELHK 607
Cdd:pfam05483 263 LEESRDKANQLEEKtklqdenLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTeEKEAQMEELNK 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 608 VIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAH--EVEKMQKSVHVKDDKIRLL 685
Cdd:pfam05483 343 AKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNnkEVELEELKKILAEDEKLLD 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 686 E----EQLQREVASRVEELKIL--NDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKciQEKDEKLRTVEELLETGLIQVA 759
Cdd:pfam05483 423 EkkqfEKIAEELKGKEQELIFLlqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKT--ELEKEKLKNIELTAHCDKLLLE 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 760 TRE----------------EELNAIRTENSSLTKEVQELKAKQM---DQVAYVLVPFVSLIEDLK--------------K 806
Cdd:pfam05483 501 NKEltqeasdmtlelkkhqEDIINCKKQEERMLKQIENLEEKEMnlrDELESVREEFIQKGDEVKckldkseenarsieY 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 807 VIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEE-IGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMK 885
Cdd:pfam05483 581 EVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKgSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQ 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 886 AALEDltgrekcTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKsdlSKKAELLKEVQDENKLFKSQVEQlnhQNHQQ 965
Cdd:pfam05483 661 KEIED-------KKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQ---HKIAEMVALMEKHKHQYDKIIEE---RDSEL 727
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1958681414 966 ASFPSQEELQTVISEK-EKEITDLCNELESLKNAVEHQRKKNNDLREKNWE 1015
Cdd:pfam05483 728 GLYKNKEQEQSSAKAAlEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
475-594 |
2.97e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.57 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 475 QKKNAEQAAAQLKVQLQEAERRwEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLM 554
Cdd:COG1566 84 ALAQAEAQLAAAEAQLARLEAE-LGAEAEIAAAEAQLAAAQAQLD----LAQRELERYQALYKKGAVSQQELDEARAALD 158
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1958681414 555 ESEQKRASQEESMQIQVQDILEQNE--ALKAQIQQFHSQIAA 594
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQAGLREEEElaAAQAQVAQAEAALAQ 200
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1081-1267 |
3.10e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1081 ACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKV---KAEESRRTIQQMQS 1157
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRAleqELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1158 SFTASEQELERLRHE-NKAMENLRREREHLEIEL-----EKAEVERSTYVME--VRELKDLLTEL---QKKLDDSYSEAV 1226
Cdd:COG4942 91 EIAELRAELEAQKEElAELLRALYRLGRQPPLALllspeDFLDAVRRLQYLKylAPARREQAEELradLAELAALRAELE 170
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1958681414 1227 RQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSL 1267
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAEL 211
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
679-1205 |
4.03e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 4.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 679 DDKIRLLEEQLQREVASRVEELKILNDQNKALQ------LEVQKLQAVVSEQPNKDvvEQMKKCIQEKDEKLRTVEELLE 752
Cdd:PRK02224 219 DEEIERYEEQREQARETRDEADEVLEEHEERREeletleAEIEDLRETIAETERER--EELAEEVRDLRERLEELEEERD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 753 TGLIQVATREEELNAIRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANK 832
Cdd:PRK02224 297 DLLAEAGLDDADAEAVEARREELEDRDEELR-DRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 833 EKTVQALKQEIEILKEEI-------GNA--QLEKAHQLS---------VTSQVQELQNLLRGKEEQVDSMKAALEDLTGR 894
Cdd:PRK02224 376 REAVEDRREEIEELEEEIeelrerfGDApvDLGNAEDFLeelreerdeLREREAELEATLRTARERVEEAEALLEAGKCP 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 895 EKCTQVCSTPRFEELEnvlkEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLfKSQVEQLnhQNHQQASFPSQEEL 974
Cdd:PRK02224 456 ECGQPVEGSPHVETIE----EDRERVEELEAELEDLEEEVEEVEERLERAEDLVEA-EDRIERL--EERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 975 QTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQdrvnkTSKERQQQVEAVEleskDLLK 1054
Cdd:PRK02224 529 RETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLA-----ELKERIESLERIR----TLLA 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1055 RLfpavsvpshSNYSEWLRSFEKKAKACmagpsdTEAVKVLEHRLKEANEMHTllQLECEKYKSVLAETEGILQKLQRSV 1134
Cdd:PRK02224 600 AI---------ADAEDEIERLREKREAL------AELNDERRERLAEKRERKR--ELEAEFDEARIEEAREDKERAEEYL 662
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958681414 1135 EQEESKWKVKAEEsRRTIQQMQSSFTASEQELERLRHENKAMENlrrEREHLEIELEKAEVERSTYvMEVR 1205
Cdd:PRK02224 663 EQVEEKLDELREE-RDDLQAEIGAVENELEELEELRERREALEN---RVEALEALYDEAEELESMY-GDLR 728
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1119-1267 |
4.94e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1119 VLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHEnkaMENLRREREHLEIELEKAEVERS 1198
Cdd:COG1196 194 ILGELERQLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAE---LEELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681414 1199 TYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSL 1267
Cdd:COG1196 271 ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
424-858 |
4.95e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 40.82 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 424 QENGILRDAVSNTTNQLEskqsaELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERrweevqsy 503
Cdd:pfam19220 3 QRNELLRVRLGEMADRLE-----DLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRR-------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 504 irkrtaeheaaqqdlqskfvakenEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKA 583
Cdd:pfam19220 70 ------------------------ELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALER 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 584 QIQQFHSQIAAqtsasvLAEELhkviAEKDKQLKQTEDSLASeqdhlasKEQELKDVQNVNFLLKAEVQKLQALAKEQAA 663
Cdd:pfam19220 126 QLAAETEQNRA------LEEEN----KALREEAQAAEKALQR-------AEGELATARERLALLEQENRRLQALSEEQAA 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 664 AAHEVEK----MQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEV----QKLQAVVSEQPNKDVV-EQMK 734
Cdd:pfam19220 189 ELAELTRrlaeLETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERaslrMKLEALTARAAATEQLlAEAR 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 735 KCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlvpfvsliEDLKKVIHEKDGQ 814
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAELEERA--------EMLTKALAAKDAA 340
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1958681414 815 IKSVEELLEVELLKVANKEKTV----QALKQEIEILKEEIGNAQLEKA 858
Cdd:pfam19220 341 LERAEERIASLSDRIAELTKRFeverAALEQANRRLKEELQRERAERA 388
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
543-856 |
5.86e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 5.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 543 KQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlaeelhkvIAEKDKQLKQTEDS 622
Cdd:COG4372 5 GEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREE----------LEQLEEELEQARSE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 623 LASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKI 702
Cdd:COG4372 75 LEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 703 LNDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQEL 782
Cdd:COG4372 155 LEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLA 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958681414 783 KAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLE 856
Cdd:COG4372 235 LSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALS 308
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
865-1055 |
5.90e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 865 SQVQELQNLLRGKEEQVDSMKAALEDLTGRekctqvcstprFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEV 944
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEAR-----------LEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 945 QDENklfksQVEQLNHQnhqqasfpsQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTE 1024
Cdd:COG1579 86 RNNK-----EYEALQKE---------IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
170 180 190
....*....|....*....|....*....|.
gi 1958681414 1025 KILQDRVNKTSKERQQQVEAVElesKDLLKR 1055
Cdd:COG1579 152 AELEAELEELEAEREELAAKIP---PELLAL 179
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
321-526 |
7.80e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.87 E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 321 KSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERssvVMARMKERIGTLEKEHNIFQNkMHVSYQE 400
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNK---LKMQLKSAQSELEQTRNTLKS-MEGSDGH 724
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 401 TQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTtNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAE 480
Cdd:pfam15921 725 AMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA-NKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1958681414 481 QAAAQLKVQLQEAERRWEEVQSYIRKRtaEHEAAQQDLQSKFVAKE 526
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQ--EQESVRLKLQHTLDVKE 847
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
478-691 |
8.27e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 8.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 478 NAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ-----SKFVAKENEVQSLHSKLtdtlvskQQLEQRLMQ 552
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREI-------AELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 553 LmeseqkRASQEESMQIQvqdilEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLAS 632
Cdd:COG4913 680 L------DASSDDLAALE-----EQLEELEAELEELEEEL----------DELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681414 633 KEQElkDVQNVNFLLKAEVQKLQALAKEQAAaaheVEKMQKSVHVKDDKIRLLEEQLQR 691
Cdd:COG4913 739 AEDL--ARLELRALLEERFAAALGDAVEREL----RENLEERIDALRARLNRAEEELER 791
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
347-641 |
8.33e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 8.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 347 DAAATKERCKQLTQEMMTEKERSSVVMAR----MKERIGTLEKEHNIFQ---NKMhvsyQETQQMQMKFEQVREQMEAEI 419
Cdd:COG3096 285 ERALELRRELFGARRQLAEEQYRLVEMAReleeLSARESDLEQDYQAASdhlNLV----QTALRQQEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 420 AHLKQENGILRDAVSNTTNQLESKQSAElnklrQDCGRLVSELNEKTGKL---QQEGVQKKNAEQAAAQLKVQLQEAERR 496
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAE-----EEVDSLKSQLADYQQALdvqQTRAIQYQQAVQALEKARALCGLPDLT 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 497 WEEVQSYIrkrtAEHEAAQQDLQSkfvakenEVQSLHSKLTDTLVSKQQLEQrLMQLME--------------------- 555
Cdd:COG3096 436 PENAEDYL----AAFRAKEQQATE-------EVLELEQKLSVADAARRQFEK-AYELVCkiageversqawqtarellrr 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 556 --SEQKRASQEESMQIQVQDI---LEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHL 630
Cdd:COG3096 504 yrSQQALAQRLQQLRAQLAELeqrLRQQQNAERLLEEFCQRIGQQLDA---AEELEELLAELEAQLEELEEQAAEAVEQR 580
|
330
....*....|.
gi 1958681414 631 ASKEQELKDVQ 641
Cdd:COG3096 581 SELRQQLEQLR 591
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
608-1249 |
9.01e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.39 E-value: 9.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 608 VIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNvNFLLKAEVQKlqalakEQAAAAHEVEKMQKSVHVKDDKIRLLEE 687
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDK-NLNKDEEKIN------NSNNKIKILEQQIKDLNDKLKKNKDKIN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 688 QLQREVASRVEELKILNDQNKALQLEVQKLqavvseqpnkdvveqmKKCIQEKDEKLRTVeelletgLIQVATREEELNA 767
Cdd:TIGR04523 100 KLNSDLSKINSEIKNDKEQKNKLEVELNKL----------------EKQKKENKKNIDKF-------LTEIKKKEKELEK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 768 IRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKK----------VIHEKDGQIKSVEELLEVELLKVANKEKTVQ 837
Cdd:TIGR04523 157 LNNKYNDLKKQKEELE-NELNLLEKEKLNIQKNIDKIKNkllklelllsNLKKKIQKNKSLESQISELKKQNNQLKDNIE 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 838 ALKQEIEILKEEIGNAQlekaHQLSVTSQVQ-ELQNLLRGKEEQVDSMKAALEDLTGREKCTQV-CSTPRFEELENVLKE 915
Cdd:TIGR04523 236 KKQQEINEKTTEISNTQ----TQLNQLKDEQnKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSeISDLNNQKEQDWNKE 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 916 KDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNH--QQASFPSQEELQTVISEKE---KEITDLCN 990
Cdd:TIGR04523 312 LKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSekQRELEEKQNEIEKLKKENQsykQEIKNLES 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 991 ELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKerqQQVEAVELESKDLLKRLFPAVSVPSHSNYSE 1070
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIK---NNSEIKDLTNQDSVKELIIKNLDNTRESLET 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1071 WLRSFEKKAKACMAGPSDTEA-VKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKW-----KVK 1144
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQKQKeLKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIsdledELN 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681414 1145 AEESRRTIQQMQSSFTASEQELERLRHENKameNLRREREHLEIELEKAEVERSTYVMEVRELKDLLTELQKKLddsySE 1224
Cdd:TIGR04523 549 KDDFELKKENLEKEIDEKNKEIEELKQTQK---SLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKEL----EK 621
|
650 660
....*....|....*....|....*
gi 1958681414 1225 AVRQNEELNLLKTQLNETHSKLQNE 1249
Cdd:TIGR04523 622 AKKENEKLSSIIKNIKSKKNKLKQE 646
|
|
| |
