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Conserved domains on  [gi|94541128|ref|YP_588471|]
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uncharacterized protein YicS [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YicS_fam NF041639
YicS family protein; Members of the YicS protein family, found in Escherichia coli and related ...
 2-97 9.53e-51

YicS family protein; Members of the YicS protein family, found in Escherichia coli and related species, average 100 amino acids in size, with a signal peptide and two widely spaced invariant Cys residues.


:

Pssm-ID: 469522  Cd Length: 96  Bit Score: 154.77  E-value: 9.53e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94541128   2 KPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNN 81
Cdd:NF041639  1 KRITLLLLAVLLALPGVAHAESPYDGLKFALRKQQVLKDLRKHCTPPSALSDEKFANTVLSSEQNKLHVREAALALERNN 80

                        90
                ....*....|....*.
gi 94541128  82 QSNYWEALGKVECPDM 97
Cdd:NF041639 81 QDNYWEAIGKVECPDM 96
 
Name Accession Description Interval E-value
YicS_fam NF041639
YicS family protein; Members of the YicS protein family, found in Escherichia coli and related ...
 2-97 9.53e-51

YicS family protein; Members of the YicS protein family, found in Escherichia coli and related species, average 100 amino acids in size, with a signal peptide and two widely spaced invariant Cys residues.


Pssm-ID: 469522  Cd Length: 96  Bit Score: 154.77  E-value: 9.53e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94541128   2 KPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNN 81
Cdd:NF041639  1 KRITLLLLAVLLALPGVAHAESPYDGLKFALRKQQVLKDLRKHCTPPSALSDEKFANTVLSSEQNKLHVREAALALERNN 80

                        90
                ....*....|....*.
gi 94541128  82 QSNYWEALGKVECPDM 97
Cdd:NF041639 81 QDNYWEAIGKVECPDM 96
 
Name Accession Description Interval E-value
YicS_fam NF041639
YicS family protein; Members of the YicS protein family, found in Escherichia coli and related ...
 2-97 9.53e-51

YicS family protein; Members of the YicS protein family, found in Escherichia coli and related species, average 100 amino acids in size, with a signal peptide and two widely spaced invariant Cys residues.


Pssm-ID: 469522  Cd Length: 96  Bit Score: 154.77  E-value: 9.53e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94541128   2 KPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNN 81
Cdd:NF041639  1 KRITLLLLAVLLALPGVAHAESPYDGLKFALRKQQVLKDLRKHCTPPSALSDEKFANTVLSSEQNKLHVREAALALERNN 80

                        90
                ....*....|....*.
gi 94541128  82 QSNYWEALGKVECPDM 97
Cdd:NF041639 81 QDNYWEAIGKVECPDM 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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