NCBI
National Center for
Biotechnology Information
Search
1S3G:
Crystal structure of adenylate kinase from Bacillus globisporus
Citation is unavailable
PDB ID:
1S3G
Download
MMDB ID:
27387
PDB Deposition Date:
2004/1/13
Updated in MMDB:
2007/10
Experimental Method:
x-ray diffraction
Resolution:
2.25 Å
Source Organism:
Sporosarcina globispora
Similar Structures:
VAST+
Download sequence data
Biological Unit
Asymmetric Unit
Biological Unit for 1S3G: monomeric; determined by author
Molecular Graphic
?
3D view
full-featured 3D viewer
Download Cn3D
Interactions
?
A
A: Adenylate kinase
1
ZN: ZINC ION
2
AP5: BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Drag symbols to move
Double click symbols to explore molecules
Protein
Nucleotide
Chemical
Download Stucture Data
?
Download
Format:
ASN.1 (Cn3D)
PDB
XML
JSON
PNG (image)
Data Set:
alpha-Carbons
Single 3D structure
* Mouse right-click to bring up context menu
Molecular Components in 1S3G
Label
Count
Molecule
Protein (1 molecule)
A
1
Adenylate Kinase
1 Protein
SS Diagram
3D Domains
Domain Families
Specific Hits
Super Families
1
50
100
150
200
217
217 residues, click to see VAST similar structures.
helix 13-23
helix 32-41
helix 44-55
helix 62-73
helix 90-103
helix 117-124
helix 165-176
helix 180-189
helix 201-212
strand 1-7
strand 26-31
strand 80-85
strand 108-114
strand 126-132
strand 135-139
strand 148-151
strand 153-159
strand 191-196
Domain 1 (1-115): click to see VAST similar structures
1
Domain 2 (126-162): click to see VAST similar structures
2
Domain 1 (179-217): click to see VAST similar structures
1
adk
PRK00279 (1-215): adenylate kinase
adk superfamily
cl35084(1-215): adenylate kinase; Reviewed
click domain graphic to toggle highlight of corresponding residues in 3D viewer
Chemicals and Non-standard biopolymers (2 molecules)
1
1
ZINC ION
2
1
BIS(ADENOSINE)-5'-PENTAPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
You are here:
NCBI
>
Computational Biology Branch
>
Structure Group
> MMDB
Write to the Help Desk
HHS Vulnerability Disclosure