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2DNA:
Solution Structure of RSGI RUH-056, a UBA domain from mouse cDNA
Citation:
No citation for this structure.
PDB ID:
2DNA
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MMDB ID:
42078
PDB Deposition Date:
2006/4/25
Updated in MMDB:
2007/11
Experimental Method:
solution nmr
Source Organism:
Mus musculus
Similar Structures:
VAST+
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A
A: unnamed protein product
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Format:
ASN.1 (Cn3D)
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Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 2DNA
Label
Count
Molecule
Protein (1 molecule)
A
1
Unnamed Protein Product
1 Protein
SS Diagram
Features
Domain Families
Specific Hits
Super Families
1
15
30
45
60
67
67 residues, click to see VAST similar structures.
helix 20-29
helix 34-44
helix 48-57
polypeptide substrate binding site
polypeptide substrate(12)
location: 28, residue: A
location: 29, residue: M
location: 30, residue: G
location: 31, residue: F
location: 32, residue: V
location: 33, residue: N
location: 49, residue: N
location: 52, residue: I
location: 53, residue: Y
location: 54, residue: K
location: 56, residue: K
location: 57, residue: S
UBA_PLICs
cd14399 (18-57): UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
UBA_like_SF superfamily
cl21463(18-57): The ubiquitin-associated (UBA) domain-like superfamily contains alpha-helical structural homology ubiquitin-binding domains, including UBA domains...
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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