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2V58:
CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E.COLI IN COMPLEX WITH POTENT INHIBITOR 1
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PDB ID:
2V58
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MMDB ID:
68925
PDB Deposition Date:
2008/10/2
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
2.1 Å
Source Organism:
Escherichia coli
Similar Structures:
VAST+
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Default Biological Unit
All Biological Units (2)
Asymmetric Unit
Biological Unit for 2V58: monomeric; determined by author and by software (PQS)
Molecular Graphic
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Interactions
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A
A: BIOTIN CARBOXYLASE
1
LZJ: 6-(2,6-dibromophenyl)pyrido[2,3-d]pyrimidine-2,7-diamine
2
CL: CHLORIDE ION
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Nucleotide
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Format:
ASN.1 (Cn3D)
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Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 2V58
Label
Count
Molecule
Protein (1 molecule)
A
1
Biotin Carboxylase
(Gene symbol:
accC
)
1 Protein
SS Diagram
3D Domains
1
100
200
300
400
449
449 residues, click to see VAST similar structures.
helix 12-24
helix 63-73
helix 89-98
helix 107-115
helix 116-126
helix 142-152
helix 178-192
helix 250-267
helix 298-305
helix 308-317
helix 395-408
helix 418-426
helix 438-446
strand 3-9
strand 26-34
strand 46-52
strand 76-81
strand 100-103
strand 155-161
strand 168-173
strand 197-202
strand 207-218
strand 220-227
strand 228-231
strand 232-235
strand 236-240
strand 270-281
strand 282-287
strand 288-292
strand 332-341
strand 351-354
strand 355-360
strand 364-369
strand 373-378
strand 383-393
strand 409-413
Domain 1 (1-105): click to see VAST similar structures
1
Domain 2 (106-134): click to see VAST similar structures
2
Domain 3 (135-204): click to see VAST similar structures
3
Domain 2 (205-324): click to see VAST similar structures
2
Domain 4 (325-432): click to see VAST similar structures
4
Domain 2 (433-449): click to see VAST similar structures
2
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Chemicals and Non-standard biopolymers (2 molecules)
1
1
6-(2,6-dibromophenyl)pyrido[2,3-d]pyrimidine-2,7-diamine
2
1
CHLORIDE ION
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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