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2WO8:
MMP12 complex with a beta hydroxy carboxylic acid
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PDB ID:
2WO8
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MMDB ID:
76541
PDB Deposition Date:
2009/7/22
Updated in MMDB:
2009/09
Experimental Method:
x-ray diffraction
Resolution:
2 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
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Default Biological Unit
All Biological Units (4)
Asymmetric Unit
Biological Unit for 2WO8: monomeric; determined by author and by software (PISA)
Molecular Graphic
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3D view
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Interactions
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A
A: MACROPHAGE METALLOELASTASE
1
ZN: ZINC ION
1
ZN: ZINC ION
2
CA: CALCIUM ION
3
077: (3S)-5-biphenyl-4-yl-3-hydroxypentanoic acid
4
SO4: SULFATE ION
4
SO4: SULFATE ION
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Protein
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Format:
ASN.1 (Cn3D)
PDB
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Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 2WO8
Label
Count
Molecule
Protein (1 molecule)
A
1
Macrophage Metalloelastase
(Gene symbol:
MMP12
)
1 Protein
SS Diagram
3D Domains
1
25
50
75
100
125
150
164
164 residues, click to see VAST similar structures.
helix 23-38
helix 108-120
helix 148-157
strand 8-16
strand 43-48
strand 54-60
strand 77-82
strand 89-94
Domain 1 (1-134): click to see VAST similar structures
1
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Chemicals and Non-standard biopolymers (6 molecules)
1
2
ZINC ION
2
1
CALCIUM ION
3
1
(3S)-5-biphenyl-4-yl-3-hydroxypentanoic acid
4
2
SULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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