3A5V: Crystal structure of alpha-galactosidase I from Mortierella vinacea

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PDB ID: 3A5VDownload
MMDB ID: 76200
PDB Deposition Date: 2009/8/12
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 3A5V: tetrameric; determined by author and by software (PISA)
Molecular Graphic ?
3A5V: Crystal structure of alpha-galactosidase I from Mortierella vinacea
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Interactions?
AA: Alpha-galactosidase1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose2BMA: beta-D-mannopyranose3MAN: alpha-D-mannopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL5TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLA_1A_1: Alpha-galactosidaseA_2A_2: Alpha-galactosidaseA_3A_3: Alpha-galactosidase1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose2BMA: beta-D-mannopyranose2BMA: beta-D-mannopyranose2BMA: beta-D-mannopyranose3MAN: alpha-D-mannopyranose3MAN: alpha-D-mannopyranose3MAN: alpha-D-mannopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose1NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL41PG: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL5TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL5TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL5TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLMANMAN: alpha-D-mannopyranoseMANMAN: alpha-D-mannopyranoseMANMAN: alpha-D-mannopyranoseNAGNAG: 2-acetamido-2-deoxy-beta-D-glucopyranoseBMABMA: beta-D-mannopyranose
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Molecular Components in 3A5V
Label Count Molecule
Proteins (4 molecules)
4
Alpha-galactosidase
4 Proteins
SS Diagram
3D Domains
175150225300375397397 residues, click to see VAST similar structures.helix 25-38helix 77-86helix 111-121helix 140-156helix 217-224helix 251-264helix 278-286helix 288-295strand 10-16strand 46-51strand 88-97strand 124-131strand 161-167strand 182-186strand 187-190strand 211-214strand 235-239strand 267-271strand 302-309strand 310-319strand 321-330strand 332-341strand 355-364strand 365-371strand 375-380strand 381-392Domain 1 (1-245): click to see VAST similar structures1Domain 2 (246-397): click to see VAST similar structures2
Chemicals and Non-standard biopolymers (53 molecules)
21
5
7
16
4
* Click molecule labels to explore molecular sequence information.

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