National Center for
Biotechnology Information

3J7P: Structure of the 80S mammalian ribosome bound to eEF2

PDB ID:	3J7P Download
MMDB ID:	170833
PDB Deposition Date:	2014/8/1
Updated in MMDB:	2024/12
Experimental Method:	electron microscopy
Resolution:	3.5 Å
Source Organism:	Sus scrofa
Similar Structures:

Biological Unit for 3J7P: 82-meric; determined by author

Molecular Components in 3J7P
Label	Count	Molecule
Proteins (78 molecules)
A	1	Ribosomal Protein UL2
B	1	Ribosomal Protein UL3
C	1	Ribosomal Protein UL4
D	1	Ribosomal Protein Ul18
E	1	Ribosomal Protein EL6
F	1	Ribosomal Protein Ul30
G	1	Ribosomal Protein EL8
H	1	Ribosomal Protein UL6
I	1	Ribosomal Protein Ul16
J	1	Ribosomal Protein UL5
K	1	Ribosomal Protein Ul11
L	1	Ribosomal Protein El13
M	1	Ribosomal Protein El14
N	1	Ribosomal Protein El15
O	1	Ribosomal Protein Ul13
P	1	Ribosomal Protein Ul22
Q	1	Ribosomal Protein El18
R	1	Ribosomal Protein El19
S	1	Ribosomal Protein El20
T	1	Ribosomal Protein El21
U	1	Ribosomal Protein El22
V	1	Ribosomal Protein Ul14
W	1	Ribosomal Protein El24
X	1	Ribosomal Protein Ul23
Y	1	Ribosomal Protein Ul24
Z	1	Ribosomal Protein El27
a	1	Ribosomal Protein Ul15
b	1	Ribosomal Protein El29
c	1	Ribosomal Protein El30
d	1	Ribosomal Protein El31
e	1	Ribosomal Protein El32
f	1	Ribosomal Protein El33
g	1	Ribosomal Protein El34
h	1	Ribosomal Protein Ul29
i	1	Ribosomal Protein El36
j	1	Ribosomal Protein El37
k	1	Ribosomal Protein El38
l	1	Ribosomal Protein El39
m	1	Ribosomal Protein El40
n	1	Ribosomal Protein El41
o	1	Ribosomal Protein El42
p	1	Ribosomal Protein El43
q	1	Ribosomal Protein Ul10
r	1	Ribosomal Protein El28
4	1	Eukaryotic Elongation Factor 2
SA	1	Ribosomal Protein US2
SB	1	Ribosomal Protein ES1
SC	1	Ribosomal Protein US5
SD	1	Ribosomal Protein US3
SE	1	Ribosomal Protein ES4
SF	1	Ribosomal Protein US7
SG	1	Ribosomal Protein ES6
SH	1	Ribosomal Protein ES7
SI	1	Ribosomal Protein ES8
SJ	1	Ribosomal Protein US4
SK	1	Ribosomal Protein Es10
SL	1	Ribosomal Protein Us17
SM	1	Ribosomal Protein Es12
SN	1	Ribosomal Protein Us15
SO	1	Ribosomal Protein Us11
SP	1	Ribosomal Protein Us19
SQ	1	Ribosomal Protein US9
SR	1	Ribosomal Protein Es17
SS	1	Ribosomal Protein Us13
ST	1	Ribosomal Protein Es19
SU	1	Ribosomal Protein Us10
SV	1	Ribosomal Protein Es21
SW	1	Ribosomal Protein US8
SX	1	Ribosomal Protein Us12
SY	1	Ribosomal Protein Es24
SZ	1	Ribosomal Protein Es25
Sa	1	Ribosomal Protein Es26
Sb	1	Ribosomal Protein Es27
Sc	1	Ribosomal Protein Es28
Sd	1	Ribosomal Protein Us14
Se	1	Ribosomal Protein Es30
Sf	1	Ribosomal Protein Es31
Sg	1	Ribosomal Protein Rack1
Nucleotides(4 molecules)
5	1	28S Ribosomal RNA
7	1	5S Ribosomal RNA
8	1	5.8s Ribosomal RNA
S2	1	18S Ribosomal RNA
Chemicals and Non-standard biopolymers (170 molecules)
1	166	MAGNESIUM ION
2	4	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303