3K6L: The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827

PDB ID: 3K6LDownload
MMDB ID: 78056
PDB Deposition Date: 2009/10/9
Updated in MMDB: 2009/11
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 3K6L: monomeric; determined by author and by software (PISA)
Molecular Components in 3K6L
Label Count Molecule
Protein (1 molecule)
1
Peptide Deformylase
(Gene symbol: def)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
NICKEL (II) IONNICKEL (II) ION
2
1
(2S,3R)-N~4~-[(1S)-1-(dimethylcarbamoyl)-2,2-dimethylpropyl]-N~1~,2-dihydroxy-3-(2-methylpropyl)butanediamide(2S,3R)-N~4~-[(1S)-1-(dimethylcarbamoyl)-2,2-dimethylpropyl]-N~1~,2-dihydroxy-3-(2-methylpropyl)butanediamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303