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3K89:
Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol
Citation:
No citation for this structure.
PDB ID:
3K89
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MMDB ID:
77718
PDB Deposition Date:
2009/10/14
Updated in MMDB:
2023/11
Experimental Method:
x-ray diffraction
Resolution:
1.6 Å
Source Organism:
Xanthomonas oryzae pv. oryzae
Similar Structures:
VAST+
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Biological Unit
Asymmetric Unit
Biological Unit for 3K89: monomeric; determined by author and by software (PISA)
Molecular Graphic
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A
A: Malonyl CoA-ACP transacylase
1
GOL: GLYCEROL
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Protein
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Format:
ASN.1 (Cn3D)
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Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 3K89
Label
Count
Molecule
Protein (1 molecule)
A
1
Malonyl Coa-acp Transacylase
1 Protein
SS Diagram
3D Domains
Domain Families
Specific Hits
Super Families
1
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150
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314
314 residues, click to see VAST similar structures.
helix 21-28
helix 31-42
helix 45-52
helix 62-82
helix 96-104
helix 109-127
helix 142-152
helix 175-188
helix 208-218
helix 242-252
helix 260-269
helix 282-290
helix 302-312
strand 5-12
strand 88-94
strand 132-139
strand 157-165
strand 167-174
strand 192-196
strand 228-234
strand 235-238
strand 256-259
strand 272-278
strand 294-300
Domain 1 (1-129): click to see VAST similar structures
1
Domain 2 (130-202): click to see VAST similar structures
2
Domain 1 (203-314): click to see VAST similar structures
1
FabD
COG0331 (4-310): Malonyl CoA-acyl carrier protein transacylase [Lipid transport and metabolism]
FabD superfamily
cl43109(4-310): Malonyl CoA-acyl carrier protein transacylase is part of the Pathway/BioSystem: Fatty acid biosynthesis
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Chemical and Non-standard biopolymers (1 molecule)
1
1
GLYCEROL
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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