3NDH: Restriction endonuclease in complex with substrate DNA

PDB ID: 3NDHDownload
MMDB ID: 83693
PDB Deposition Date: 2010/6/7
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 1.3  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3NDH: tetrameric; determined by author and by software (PISA)
Molecular Components in 3NDH
Label Count Molecule
Proteins (2 molecules)
2
Restriction Endonuclease Thai
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*g*gp*tp*ap*cp*gp*cp*gp*ap*tp*g)-3')
Molecule annotation
1
DNA (5'-d(*c*cp*ap*tp*cp*gp*cp*gp*tp*ap*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
2
SODIUM IONSODIUM ION
2
2
CHLORIDE IONCHLORIDE ION
3
3
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
4
4
ACETATE IONACETATE ION
5
2
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303