3NKR: Crystal structure of mouse autotaxin in complex with 22:6-LPA

PDB ID: 3NKRDownload
MMDB ID: 88050
PDB Deposition Date: 2010/6/20
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.704  Å
Source Organism:
Similar Structures:
Biological Unit for 3NKR: monomeric; determined by author and by software (PISA)
Molecular Components in 3NKR
Label Count Molecule
Protein (1 molecule)
1
Ectonucleotide Pyrophosphatase/phosphodiesterase Family Member 2
(Gene symbol: Enpp2)
Molecule annotation
Chemicals and Non-standard biopolymers (40 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
3
alpha-D-mannopyranosealpha-D-mannopyranose
4
2
ZINC IONZINC ION
5
1
CALCIUM IONCALCIUM ION
6
1
SODIUM IONSODIUM ION
7
1
POTASSIUM IONPOTASSIUM ION
8
2
(2R)-2-hydroxy-3-(phosphonooxy)propyl (4Z,7E,10E,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate(2R)-2-hydroxy-3-(phosphonooxy)propyl (4Z,7E,10E,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate
9
2
THIOCYANATE IONTHIOCYANATE ION
10
21
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303