3NYH: Crystal Structure Of Lactoperoxidase Complexed Simultaneously With Thiocyanate Ion, Iodide Ion, Bromide Ion, Chloride Ion Through The Substrate Diffusion Channel Reveals A Preferential Queue Of The Inorganic Substrates Towards The Distal Heme Cavity

PDB ID: 3NYHDownload
MMDB ID: 85616
PDB Deposition Date: 2010/7/15
Updated in MMDB: 2010/10
Experimental Method:
x-ray diffraction
Resolution: 1.77  Å
Source Organism:
Similar Structures:
Biological Unit for 3NYH: monomeric; determined by author and by software (PISA)
Molecular Components in 3NYH
Label Count Molecule
Protein (1 molecule)
1
Lactoperoxidase
(Gene symbol: LPO)
Molecule annotation
Chemicals and Non-standard biopolymers (34 molecules)
1
1
Protoporphyrin Ix Containing FeHeme
2
1
Calcium IonCalcium Ion
3
6
N-acetyl-d-glucosamineN-acetyl-d-glucosamine
4
1
Alpha-d-mannoseAlpha-d-mannose
5
15
Iodide IonIodide Ion
6
1
Bromide IonBromide Ion
7
1
Chloride IonChloride Ion
8
3
GlycerolGlycerin; Propane-1,2,3-triol
9
1
Di(hydroxyethyl)etherDi(hydroxyethyl)ether
10
1
(4s)-2-methyl-2,4-pentanediol(4s)-2-methyl-2,4-pentanediol
11
1
1,2-ethanediolEthylene Glycol
12
1
Zinc IonZinc Ion
13
1
Thiocyanate IonThiocyanate Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303