4EW0: mouse MBD4 glycosylase domain in complex with a G:5hmU (5-hydroxymethyluracil) mismatch

PDB ID: 4EW0Download
MMDB ID: 101242
PDB Deposition Date: 2012/4/26
Updated in MMDB: 2012/10
Experimental Method:
x-ray diffraction
Resolution: 2.39  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4EW0: trimeric; determined by author and by software (PISA)
Molecular Components in 4EW0
Label Count Molecule
Protein (1 molecule)
1
Methyl-cpg-binding Domain Protein 4
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*cp*ap*gp*cp*gp*cp*ap*tp*gp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*cp*ap*tp*gp*(5hu)p*gp*cp*tp*gp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
1
NICKEL (II) IONNICKEL (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303