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5CB5:
Structural Insights into the Mechanism of Escherichia coli Ymdb
PDB ID:
5CB5
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MMDB ID:
133914
PDB Deposition Date:
2015/6/30
Updated in MMDB:
2015/12
Experimental Method:
x-ray diffraction
Resolution:
2.8 Å
Source Organism:
Escherichia coli K-12
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5CB5: dimeric; determined by author and by software (PISA)
Molecular Components in 5CB5
Label
Count
Molecule
Proteins (2 molecules)
R
Q
2
O-acetyl-adp-ribose Deacetylase
(Gene symbol:
ymdB
)
Chemicals and Non-standard biopolymers (5 molecules)
1
2
ADENOSINE-5-DIPHOSPHORIBOSE
2
2
SULFATE ION
3
1
ACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303