NCBI
National Center for
Biotechnology Information
Search
5FHD:
Structure of Bacteroides sp Pif1 complexed with tailed dsDNA resulting in ssDNA bound complex
PDB ID:
5FHD
Download
MMDB ID:
137932
PDB Deposition Date:
2015/12/22
Updated in MMDB:
2017/10
Experimental Method:
x-ray diffraction
Resolution:
2 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
C, E
Bacteroides fragilis
A, B
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5FHD: dimeric; determined by author and by software (PISA)
Molecular Components in 5FHD
Label
Count
Molecule
Protein (1 molecule)
A
1
Uncharacterized Protein
Nucleotide(1 molecule)
C
1
DNA (5'-d(*tp*tp*tp*tp*tp*tp*tp*cp*cp*gp*gp*gp*gp*cp*cp*gp*cp*gp*c)-3')
Chemicals and Non-standard biopolymers (3 molecules)
1
1
ADENOSINE-5'-DIPHOSPHATE
2
1
MAGNESIUM ION
3
1
TETRAFLUOROALUMINATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303