5FP8: Crystal structure of human KDM4D in complex with 3-4-methylthiophen-2- ylmethylaminopyridine-4-carboxylic acid

PDB ID: 5FP8Download
MMDB ID: 136071
PDB Deposition Date: 2015/11/27
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.98  Å
Source Organism:
Similar Structures:
Biological Unit for 5FP8: monomeric; determined by author and by software (PISA)
Molecular Components in 5FP8
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 4D
(Gene symbol: KDM4D)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
ZINC IONZINC ION
2
1
COBALT (II) IONCOBALT (II) ION
3
1
3-[(4-methylthiophen-2-yl)methylamino]pyridine-4-carboxylic acid3-[(4-methylthiophen-2-yl)methylamino]pyridine-4-carboxylic acid
4
7
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303