5K8K: Structure of the Haemophilus influenzae LpxH-lipid X complex

PDB ID: 5K8KDownload
MMDB ID: 142178
PDB Deposition Date: 2016/5/30
Updated in MMDB: 2016/11
Experimental Method:
x-ray diffraction
Resolution: 2.55  Å
Source Organism:
Similar Structures:
Biological Unit for 5K8K: monomeric; determined by author and by software (PISA)
Molecular Components in 5K8K
Label Count Molecule
Protein (1 molecule)
1
Udp-2,3-diacylglucosamine Hydrolase
(Gene symbol: HI0735)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
2
MANGANESE (II) IONMANGANESE (II) ION
2
1
(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE
3
2
ACETATE IONACETATE ION
4
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303