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5LSM:
Crystal structure of nitronate monooxygenase (SO_0471) from Shewanella oneidensis MR-1
Citation:
No citation for this structure.
PDB ID:
5LSM
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MMDB ID:
143169
PDB Deposition Date:
2016/9/4
Updated in MMDB:
2016/09
Experimental Method:
x-ray diffraction
Resolution:
2.5 Å
Source Organism:
Shewanella oneidensis MR-1
Similar Structures:
VAST+
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Default Biological Unit
All Biological Units (6)
Asymmetric Unit
Biological Unit for 5LSM: dimeric; determined by author
Molecular Graphic
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Interactions
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H
H: FMN-dependent nitronate monooxygenase
1
FMN: FLAVIN MONONUCLEOTIDE
A_0
A_0: FMN-dependent nitronate monooxygenase
1
FMN: FLAVIN MONONUCLEOTIDE
2
GOL: GLYCEROL
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Format:
ASN.1 (Cn3D)
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Data Set:
alpha-Carbons
Single 3D structure
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Molecular Components in 5LSM
Label
Count
Molecule
Proteins (2 molecules)
H
A_0
2
Fmn-dependent Nitronate Monooxygenase
(Gene symbol:
SO_0471
)
2 Proteins
SS Diagram
3D Domains
1
75
150
225
300
359
359 residues, click to see VAST similar structures.
helix 3-10
helix 27-35
helix 48-61
helix 80-90
helix 114-122
helix 138-145
helix 158-167
helix 198-207
helix 221-230
helix 251-258
helix 305-314
helix 335-343
strand 14-18
strand 37-44
strand 65-72
strand 127-133
strand 149-156
strand 170-176
strand 211-216
strand 233-238
strand 264-271
strand 272-280
Domain 1 (1-244): click to see VAST similar structures
1
Domain 2 (245-292): click to see VAST similar structures
2
Domain 1 (325-359): click to see VAST similar structures
1
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Chemicals and Non-standard biopolymers (3 molecules)
1
2
FLAVIN MONONUCLEOTIDE
2
1
GLYCEROL
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
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