National Center for
Biotechnology Information

5LZT: Structure of the mammalian ribosomal termination complex with eRF1 and eRF3

PDB ID:

MMDB ID:

171287

PDB Deposition Date:

2016/10/2

Updated in MMDB:

2021/02

Experimental Method:

electron microscopy

Resolution:

3.65 Å

Source Organism:

Oryctolagus cuniculus▼

Taxonomy	Molecule
Oryctolagus cuniculus	A, B, C, D, E, F, G, H, I, J, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i , j, k, l, m, n, o, p, r, s, t, 1, 2, 3, 5, 7, 8, 9, AA, BB, CC, DD, EE, FF, GG, HH, II, JJ, KK, LL, MM, NN, OO, PP, QQ, RR, SS, TT, UU, VV, WW, XX, YY, ZZ, aa, bb, cc, dd, ee, ff, gg, hh
Homo sapiens	ii, jj

Similar Structures:

Biological Unit for 5LZT: 87-meric; determined by author

Molecular Components in 5LZT
Label	Count	Molecule
Proteins (80 molecules)
A	1	UL2
B	1	UL3
C	1	UL4
D	1	Ul18
E	1	EL6
F	1	Ul30
G	1	EL8
H	1	UL6
I	1	Ul16
J	1	UL5
L	1	El13
M	1	El14
N	1	El15
O	1	Ul13
P	1	Ul22
Q	1	El18
R	1	El19
S	1	El20
T	1	El21
U	1	El22
V	1	Ul14
W	1	El24
X	1	Ul23
Y	1	Ul24
Z	1	El27
a	1	Ul15
b	1	El29
c	1	El30
d	1	El31
e	1	El32
f	1	El33
g	1	El34
h	1	Ul29
i	1	El36
j	1	El37
k	1	El38
l	1	El39
m	1	El40
n	1	El41
o	1	El42
p	1	El43
r	1	El28
s	1	Ul10
t	1	Ul11
1	1	Nascent Chain
AA	1	US2
BB	1	ES1
CC	1	US5
DD	1	US3
EE	1	ES4
FF	1	US7
GG	1	ES6
HH	1	ES7
II	1	ES8
JJ	1	US4
KK	1	Es10
LL	1	Us17
MM	1	Es12
NN	1	Us15
OO	1	Us11
PP	1	Us19
QQ	1	US9
RR	1	Es17
SS	1	Us13
TT	1	Es19
UU	1	Us10
VV	1	Es21
WW	1	US8
XX	1	Us12
YY	1	Es24
ZZ	1	Es25
aa	1	Es26
bb	1	Es27
cc	1	Es28
dd	1	Us14
ee	1	Es30
ff	1	Es31
gg	1	Rack1
ii	1	Erf1
jj	1	Erf3a
Nucleotides(7 molecules)
2	1	P-site tRNA
3	1	E-site tRNA
5	1	28S Ribosomal RNA
7	1	5S Ribosomal RNA
8	1	5.8s Ribosomal RNA
9	1	18S Ribosomal RNA
hh	1	mRNA (Uga Stop Codon)
Chemicals and Non-standard biopolymers (291 molecules)
1	282	MAGNESIUM ION
2	8	ZINC ION
3	1	PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER

* Click molecule labels to explore molecular sequence information.

Citing MMDB