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5TFZ:
Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with nickel and diacrylate
PDB ID:
5TFZ
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MMDB ID:
151763
PDB Deposition Date:
2016/9/27
Updated in MMDB:
2017/06
Experimental Method:
x-ray diffraction
Resolution:
2.2 Å
Source Organism:
Candidatus Pelagibacter ubique HTCC1062
Similar Structures:
VAST+
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Biological Unit for 5TFZ: dimeric; determined by author and by software (PISA)
Molecular Components in 5TFZ
Label
Count
Molecule
Proteins (2 molecules)
A
B
2
Dimethylsulfoniopropionate Lyase Dddk
Chemicals and Non-standard biopolymers (7 molecules)
1
2
NICKEL (II) ION
2
2
3-(acryloyloxy)propanoic acid
3
3
DI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303