5VZJ: STRUCTURE OF A TWELVE COMPONENT MPP6-NUCLEAR RNA EXOSOME COMPLEX BOUND TO RNA

PDB ID: 5VZJDownload
MMDB ID: 153251
PDB Deposition Date: 2017/5/28
Updated in MMDB: 2019/11
Experimental Method:
x-ray diffraction
Resolution: 3.3  Å
Source Organism:
Saccharomyces cerevisiae S288C▼
Similar Structures:
Biological Unit for 5VZJ: 14-meric; determined by author
Molecular Components in 5VZJ
Label Count Molecule
Proteins (12 molecules)
1
Exosome Complex Component Rrp45
Molecule annotation
1
Exosome Complex Component Ski6
Molecule annotation
1
Exosome Complex Component Rrp43
Molecule annotation
1
Exosome Complex Component Rrp46
Molecule annotation
1
Exosome Complex Component Rrp42
Molecule annotation
1
Exosome Complex Component Mtr3
Molecule annotation
1
Exosome Complex Component Rrp40
Molecule annotation
1
Exosome Complex Component Rrp4
Molecule annotation
1
Exosome Complex Component Csl4
Molecule annotation
1
Exosome Complex Exonuclease Rrp6
Molecule annotation
1
Exosome Complex Exonuclease Dis3
Molecule annotation
1
M-phase Phosphoprotein 6 Homolog
Molecule annotation
Nucleotides(2 molecules)
1
RNA (11-mer)
Molecule annotation
1
RNA (19-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
5
SULFATE IONSULFATE ION
2
2
GLYCEROLGLYCEROL
3
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303